http://identifiers.org/exac.variant/4-151199083-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199083
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199083
    reference: chr 4
allele count: 9
allele frequency: 7.433470439565885e-5
allele num: 121074
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2480T>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8387T>G
  hgvsp: ENSP00000421552.1:p.Val2796Gly
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1682T>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4519T>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.771T>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8390T>G
  hgvsp: ENSP00000446299.1:p.Val2797Gly
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4348T>G
  hgvsp: ENSP00000426669.1:p.Val1450Gly
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8423T>G
  hgvsp: ENSP00000349629.3:p.Val2808Gly
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3770
  bin: 9.75e1
  variant carriers: 6
hgvs: p.Val2808Gly
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum

4-151199089-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199089
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199089
    reference: chr 4
allele count: 5
allele frequency: 4.123099251245176e-5
allele num: 121268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2474G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.765G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4342G>A
  hgvsp: ENSP00000426669.1:p.Arg1448Gln
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4513G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8381G>A
  hgvsp: ENSP00000421552.1:p.Arg2794Gln
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8384G>A
  hgvsp: ENSP00000446299.1:p.Arg2795Gln
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1676G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8417G>A
  hgvsp: ENSP00000349629.3:p.Arg2806Gln
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg2806Gln
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

4-151199096-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199096
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199096
    reference: chr 4
allele count: 4
allele frequency: 3.298751422586551e-5
allele num: 121258
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.758G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4335G>A
  hgvsp: ENSP00000426669.1:p.Val1446Met
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8374G>A
  hgvsp: ENSP00000421552.1:p.Val2792Met
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1669G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4506G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2467G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8410G>A
  hgvsp: ENSP00000349629.3:p.Val2804Met
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8377G>A
  hgvsp: ENSP00000446299.1:p.Val2793Met
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3297
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10568
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val2804Met
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD

4-151199097-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199097
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199097
    reference: chr 4
allele count: 3
allele frequency: 2.474104374216534e-5
allele num: 121256
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8409C>T
  hgvsp: ENST00000357115.3:c.8409C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.757C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2466C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8373C>T
  hgvsp: ENST00000510413.1:c.8373C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8376C>T
  hgvsp: ENST00000535741.1:c.8376C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4505C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1668C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4334C>T
  hgvsp: ENST00000509835.1:c.4334C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17391
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4072
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2580
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val2803Val
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

4-151199104-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199104
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199104
    reference: chr 4
allele count: 1
allele frequency: 8.25000825000825e-6
allele num: 121212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8369G>A
  hgvsp: ENSP00000446299.1:p.Gly2790Glu
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2459G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8366G>A
  hgvsp: ENSP00000421552.1:p.Gly2789Glu
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8402G>A
  hgvsp: ENSP00000349629.3:p.Gly2801Glu
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.750G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4327G>A
  hgvsp: ENSP00000426669.1:p.Gly1443Glu
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4498G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1661G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3290
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly2801Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

4-151199105-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199105
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199105
    reference: chr 4
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2458G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8365G>A
  hgvsp: ENSP00000421552.1:p.Gly2789Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8368G>A
  hgvsp: ENSP00000446299.1:p.Gly2790Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8401G>A
  hgvsp: ENSP00000349629.3:p.Gly2801Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4326G>A
  hgvsp: ENSP00000426669.1:p.Gly1443Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.749G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4497G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1660G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3716
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10553
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33810
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly2801Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

4-151199108-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199108
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199108
    reference: chr 4
allele count: 2
allele frequency: 1.65016501650165e-5
allele num: 121200
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8362A>G
  hgvsp: ENSP00000421552.1:p.Arg2788Gly
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8398A>G
  hgvsp: ENSP00000349629.3:p.Arg2800Gly
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.746A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8365A>G
  hgvsp: ENSP00000446299.1:p.Arg2789Gly
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1657A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4323A>G
  hgvsp: ENSP00000426669.1:p.Arg1442Gly
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4494A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2455A>G
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10556
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4068
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg2800Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP

4-151199111-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199111
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199111
    reference: chr 4
allele count: 4
allele frequency: 3.300275573010346e-5
allele num: 121202
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8395G>A
  hgvsp: ENSP00000349629.3:p.Asp2799Asn
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1654G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.743G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8362G>A
  hgvsp: ENSP00000446299.1:p.Asp2788Asn
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8359G>A
  hgvsp: ENSP00000421552.1:p.Asp2787Asn
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4320G>A
  hgvsp: ENSP00000426669.1:p.Asp1441Asn
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4491G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2452G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10554
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4067
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp2799Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

4-151199121-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199121
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199121
    reference: chr 4
allele count: 2
allele frequency: 1.650628063978344e-5
allele num: 121166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4310C>T
  hgvsp: ENST00000509835.1:c.4310C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8352C>T
  hgvsp: ENST00000535741.1:c.8352C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.733C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8385C>T
  hgvsp: ENST00000357115.3:c.8385C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8349C>T
  hgvsp: ENST00000510413.1:c.8349C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1644C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2442C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4481C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17360
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu2795Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

4-151199126-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199126
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199126
    reference: chr 4
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8344C>T
  hgvsp: ENST00000510413.1:c.8344C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2437C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.728C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4305C>T
  hgvsp: ENST00000509835.1:c.4305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1639C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8347C>T
  hgvsp: ENST00000535741.1:c.8347C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8380C>T
  hgvsp: ENST00000357115.3:c.8380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4476C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33756
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu2794Leu
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD

4-151199126-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199126
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199126
    reference: chr 4
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2437C>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1639C>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4476C>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8344C>G
  hgvsp: ENSP00000421552.1:p.Leu2782Val
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.728C>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4305C>G
  hgvsp: ENSP00000426669.1:p.Leu1436Val
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8347C>G
  hgvsp: ENSP00000446299.1:p.Leu2783Val
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8380C>G
  hgvsp: ENSP00000349629.3:p.Leu2794Val
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33756
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu2794Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

4-151199145-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199145
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199145
    reference: chr 4
allele count: 120
allele frequency: 9.928843289756743e-4
allele num: 120860
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8361G>A
  hgvsp: ENST00000357115.3:c.8361G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4457G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1620G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8328G>A
  hgvsp: ENST00000535741.1:c.8328G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.709G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8325G>A
  hgvsp: ENST00000510413.1:c.8325G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4286G>A
  hgvsp: ENST00000509835.1:c.4286G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2418G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 7902
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 17251
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 5318
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 25017
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3235
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33411
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu2787Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

4-151199155-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199155
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199155
    reference: chr 4
allele count: 10
allele frequency: 8.290636555074699e-5
allele num: 120618
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4447C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2408C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8351C>T
  hgvsp: ENSP00000349629.3:p.Ala2784Val
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.699C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8318C>T
  hgvsp: ENSP00000446299.1:p.Ala2773Val
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4276C>T
  hgvsp: ENSP00000426669.1:p.Ala1426Val
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8315C>T
  hgvsp: ENSP00000421552.1:p.Ala2772Val
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1610C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5290
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10327
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala2784Val
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

4-151199165-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199165
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199165
    reference: chr 4
allele count: 4
allele frequency: 3.325739561334952e-5
allele num: 120274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2407-9G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.698-9G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4437G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1609-9G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8314-9G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8317-9G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8350-9G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4275-9G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10192
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3182
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/4-151199167-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199167
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199167
    reference: chr 4
allele count: 1
allele frequency: 8.326117364950376e-6
allele num: 120104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8314-11G>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1609-11G>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8317-11G>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.698-11G>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4435G>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8350-11G>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2407-11G>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4275-11G>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16859
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2508
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum

4-151199167-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199167
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199167
    reference: chr 4
allele count: 1
allele frequency: 8.326117364950376e-6
allele num: 120104
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8350-11G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8317-11G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.698-11G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8314-11G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4435G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4275-11G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1609-11G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2407-11G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3946
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

4-151199168-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199168
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199167
    reference: chr 4
allele count: 1
allele frequency: 8.326671995736744e-6
allele num: 120096
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8314-13delC
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4433delC
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.698-13delC
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8317-13delC
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8350-13delC
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1609-13delC
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4275-13delC
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2407-13delC
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31924
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10014
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3144
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2507
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: AG
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff

4-151199170-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199170
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199170
    reference: chr 4
allele count: 1
allele frequency: 8.328336331534413e-6
allele num: 120072
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8350-14G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4275-14G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.698-14G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8314-14G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8317-14G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4432G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1609-14G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2407-14G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9962
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

4-151199189-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199189
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199189
    reference: chr 4
allele count: 1
allele frequency: 8.386588168201411e-6
allele num: 119238
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1609-33C>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2407-33C>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8314-33C>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.698-33C>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8317-33C>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4413C>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8350-33C>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4275-33C>G
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5022
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26748
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3728
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2393
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

4-151199191-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199191
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199191
    reference: chr 4
allele count: 1
allele frequency: 8.390387971539804e-6
allele num: 119184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4275-35A>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8317-35A>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8314-35A>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4411A>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8350-35A>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2407-35A>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1609-35A>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.698-35A>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14943
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9096
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2918
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3374
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP

4-151199194-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199194
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199194
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 118898
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8350-38A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8317-38A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4275-38A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4408A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1609-38A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2407-38A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8314-38A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.698-38A>G
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13839
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5627
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7631
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22003
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1296
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2818
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

4-151199196-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199196
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199196
    reference: chr 4
allele count: 1
allele frequency: 8.444519506840061e-6
allele num: 118420
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8350-40C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8317-40C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4406C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1609-40C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4275-40C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8314-40C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2407-40C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.698-40C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4330
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3165
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3938
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2354
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6251
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ

4-151199203-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199203
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199203
    reference: chr 4
allele count: 1
allele frequency: 8.485794779539051e-6
allele num: 117844
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.698-47A>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8350-47A>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4399A>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2407-47A>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8314-47A>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8317-47A>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4275-47A>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1609-47A>C
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11485
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3380
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14128
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3279
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5142
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2084
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

4-151199205-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199205
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199205
    reference: chr 4
allele count: 3
allele frequency: 2.563357656749321e-5
allele num: 117034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4397G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8350-49G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.698-49G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4275-49G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8314-49G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2407-49G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1609-49G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8317-49G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13793
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4233
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5261
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2276
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3157
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

4-151199206-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151199206
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151199206
    reference: chr 4
allele count: 10
allele frequency: 8.542627712284299e-5
allele num: 117060
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.698-50C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8314-50C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8317-50C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1609-50C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+4396C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4275-50C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8350-50C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2407-50C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13922
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11124
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4232
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2258
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5352
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2072
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3259
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

4-151203551-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203551
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203551
    reference: chr 4
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+51G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+51G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+51G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+51G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+51G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+51G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+51G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+51G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38910
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

4-151203552-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203552
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203552
    reference: chr 4
allele count: 3
allele frequency: 2.471495419495156e-5
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+50T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+50T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+50T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+50T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+50T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+50T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+50T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+50T>C
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2806
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38994
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP

4-151203555-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203555
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203555
    reference: chr 4
allele count: 4
allele frequency: 3.295544423938835e-5
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+47G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+47G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+47G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+47G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+47G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+47G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+47G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+47G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28311
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

4-151203560-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203560
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203560
    reference: chr 4
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+42T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+42T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+42T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+42T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+42T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+42T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+42T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+42T>C
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9141
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-151203563-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203563
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203563
    reference: chr 4
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+39A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+39A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+39A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+39A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+39A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+39A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+39A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+39A>G
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2749
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD

4-151203565-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203565
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203565
    reference: chr 4
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+37T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+37T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+37T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+37T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+37T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+37T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+37T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+37T>C
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2748
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9140
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

4-151203568-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203568
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203568
    reference: chr 4
allele count: 2
allele frequency: 1.647636465490254e-5
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+34C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+34C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+34C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+34C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+34C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+34C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+34C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+34C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2746
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2269
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

4-151203570-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203570
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203570
    reference: chr 4
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+32G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+32G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+32G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+32G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+32G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+32G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+32G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+32G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3728
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 39444
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

4-151203571-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203571
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203571
    reference: chr 4
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+31C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+31C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+31C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+31C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+31C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+31C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+31C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+31C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2751
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39487
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS

4-151203574-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203574
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203574
    reference: chr 4
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+28T>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+28T>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+28T>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+28T>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+28T>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+28T>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+28T>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+28T>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3724
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

4-151203580-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203580
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203580
    reference: chr 4
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+22C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+22C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+22C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+22C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+22C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+22C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+22C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+22C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6516
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2268
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2749
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ

4-151203584-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203584
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203584
    reference: chr 4
allele count: 3
allele frequency: 2.471169686985173e-5
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+18T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+18T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+18T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+18T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+18T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+18T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+18T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+18T>C
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9154
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39581
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

4-151203585-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203585
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203585
    reference: chr 4
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+17C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+17C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+17C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+17C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+17C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+17C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+17C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+17C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2749
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9158
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

4-151203588-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203588
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203588
    reference: chr 4
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+14G>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+14G>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+14G>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+14G>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+14G>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+14G>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+14G>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+14G>C
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28467
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3717
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39591
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

4-151203594-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203594
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203594
    reference: chr 4
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+8C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2268
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 9.25e1
  variant carriers: 0
hgvs: c.8349+8C>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

4-151203596-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203596
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203596
    reference: chr 4
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2406+6T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8316+6T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8349+6T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.386+6T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1608+6T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.697+6T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4274+6T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8313+6T>C
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
hgvs: c.8349+6T>C
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

4-151203608-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203608
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203608
    reference: chr 4
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.691C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.380C>T
  hgvsp: ENST00000508606.1:c.380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8307C>T
  hgvsp: ENST00000510413.1:c.8307C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8343C>T
  hgvsp: ENST00000357115.3:c.8343C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2400C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4268C>T
  hgvsp: ENST00000509835.1:c.4268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8310C>T
  hgvsp: ENST00000535741.1:c.8310C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1602C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3714
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asn2781Asn
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum

4-151203611-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203611
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203611
    reference: chr 4
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8304T>C
  hgvsp: ENST00000510413.1:c.8304T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1599T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4265T>C
  hgvsp: ENST00000509835.1:c.4265T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8340T>C
  hgvsp: ENST00000357115.3:c.8340T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.377T>C
  hgvsp: ENST00000508606.1:c.377T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2397T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8307T>C
  hgvsp: ENST00000535741.1:c.8307T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.688T>C
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39641
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9161
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp2780Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

4-151203623-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203623
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203623
    reference: chr 4
allele count: 9
allele frequency: 7.412776331828814e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8328G>A
  hgvsp: ENSP00000349629.3:p.Met2776Ile
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8292G>A
  hgvsp: ENSP00000421552.1:p.Met2764Ile
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.676G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.365G>A
  hgvsp: ENSP00000425852.1:p.Met122Ile
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4253G>A
  hgvsp: ENSP00000426669.1:p.Met1418Ile
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8295G>A
  hgvsp: ENSP00000446299.1:p.Met2765Ile
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2385G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1587G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 28502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3713
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9160
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met2776Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

4-151203626-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203626
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203626
    reference: chr 4
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8325G>A
  hgvsp: ENST00000357115.3:c.8325G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.673G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4250G>A
  hgvsp: ENST00000509835.1:c.4250G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.362G>A
  hgvsp: ENST00000508606.1:c.362G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1584G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2382G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8292G>A
  hgvsp: ENST00000535741.1:c.8292G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8289G>A
  hgvsp: ENST00000510413.1:c.8289G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39649
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr2775Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

4-151203627-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203627
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203627
    reference: chr 4
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4249C>T
  hgvsp: ENSP00000426669.1:p.Thr1417Met
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1583C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2381C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.672C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8288C>T
  hgvsp: ENSP00000421552.1:p.Thr2763Met
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8324C>T
  hgvsp: ENSP00000349629.3:p.Thr2775Met
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.361C>T
  hgvsp: ENSP00000425852.1:p.Thr121Met
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8291C>T
  hgvsp: ENSP00000446299.1:p.Thr2764Met
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2750
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39650
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr2775Met
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

4-151203643-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203643
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203643
    reference: chr 4
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.345G>A
  hgvsp: ENSP00000425852.1:p.Gly116Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8308G>A
  hgvsp: ENSP00000349629.3:p.Gly2770Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2365G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8272G>A
  hgvsp: ENSP00000421552.1:p.Gly2758Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.656G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1567G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4233G>A
  hgvsp: ENSP00000426669.1:p.Gly1412Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8275G>A
  hgvsp: ENSP00000446299.1:p.Gly2759Arg
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28509
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3701
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2264
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly2770Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

4-151203649-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203649
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203649
    reference: chr 4
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2359G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8266G>A
  hgvsp: ENSP00000421552.1:p.Val2756Met
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4227G>A
  hgvsp: ENSP00000426669.1:p.Val1410Met
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8302G>A
  hgvsp: ENSP00000349629.3:p.Val2768Met
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1561G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.339G>A
  hgvsp: ENSP00000425852.1:p.Val114Met
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.650G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8269G>A
  hgvsp: ENSP00000446299.1:p.Val2757Met
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val2768Met
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

4-151203662-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203662
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203662
    reference: chr 4
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1548C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4214C>T
  hgvsp: ENST00000509835.1:c.4214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8253C>T
  hgvsp: ENST00000510413.1:c.8253C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8289C>T
  hgvsp: ENST00000357115.3:c.8289C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.326C>T
  hgvsp: ENST00000508606.1:c.326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.637C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8256C>T
  hgvsp: ENST00000535741.1:c.8256C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2346C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16609
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3699
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9164
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Phe2763Phe
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

4-151203670-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203670
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203670
    reference: chr 4
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8245G>A
  hgvsp: ENSP00000421552.1:p.Gly2749Ser
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4206G>A
  hgvsp: ENSP00000426669.1:p.Gly1403Ser
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1540G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.318G>A
  hgvsp: ENSP00000425852.1:p.Gly107Ser
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8281G>A
  hgvsp: ENSP00000349629.3:p.Gly2761Ser
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2338G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8248G>A
  hgvsp: ENSP00000446299.1:p.Gly2750Ser
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.629G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3697
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly2761Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD

4-151203671-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203671
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203671
    reference: chr 4
allele count: 10
allele frequency: 8.23641814647646e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1539C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2337C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8247C>T
  hgvsp: ENST00000535741.1:c.8247C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8280C>T
  hgvsp: ENST00000357115.3:c.8280C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8244C>T
  hgvsp: ENST00000510413.1:c.8244C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.317C>T
  hgvsp: ENST00000508606.1:c.317C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4205C>T
  hgvsp: ENST00000509835.1:c.4205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.628C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9164
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asn2760Asn
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

4-151203677-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203677
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203677
    reference: chr 4
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.622T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1533T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2331T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8274T>C
  hgvsp: ENST00000357115.3:c.8274T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.311T>C
  hgvsp: ENST00000508606.1:c.311T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4199T>C
  hgvsp: ENST00000509835.1:c.4199T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8241T>C
  hgvsp: ENST00000535741.1:c.8241T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8238T>C
  hgvsp: ENST00000510413.1:c.8238T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9163
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Tyr2758Tyr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

4-151203678-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203678
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203678
    reference: chr 4
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.310A>G
  hgvsp: ENSP00000425852.1:p.Tyr104Cys
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.621A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8240A>G
  hgvsp: ENSP00000446299.1:p.Tyr2747Cys
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4198A>G
  hgvsp: ENSP00000426669.1:p.Tyr1400Cys
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8273A>G
  hgvsp: ENSP00000349629.3:p.Tyr2758Cys
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8237A>G
  hgvsp: ENSP00000421552.1:p.Tyr2746Cys
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1532A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2330A>G
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2750
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Tyr2758Cys
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/4-151203682-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203682
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203682
    reference: chr 4
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4194T>G
  hgvsp: ENSP00000426669.1:p.Phe1399Val
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8269T>G
  hgvsp: ENSP00000349629.3:p.Phe2757Val
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2326T>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8236T>G
  hgvsp: ENSP00000446299.1:p.Phe2746Val
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.306T>G
  hgvsp: ENSP00000425852.1:p.Phe103Val
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1528T>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8233T>G
  hgvsp: ENSP00000421552.1:p.Phe2745Val
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.617T>G
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39673
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Phe2757Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

4-151203684-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203684
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203684
    reference: chr 4
allele count: 11
allele frequency: 9.060059961124106e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8267T>C
  hgvsp: ENSP00000349629.3:p.Ile2756Thr
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.615T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.304T>C
  hgvsp: ENSP00000425852.1:p.Ile102Thr
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8231T>C
  hgvsp: ENSP00000421552.1:p.Ile2744Thr
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1526T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8234T>C
  hgvsp: ENSP00000446299.1:p.Ile2745Thr
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4192T>C
  hgvsp: ENSP00000426669.1:p.Ile1398Thr
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2324T>C
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39673
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile2756Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

4-151203685-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203685
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203685
    reference: chr 4
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.614A>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8233A>T
  hgvsp: ENSP00000446299.1:p.Ile2745Leu
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2323A>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8230A>T
  hgvsp: ENSP00000421552.1:p.Ile2744Leu
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.303A>T
  hgvsp: ENSP00000425852.1:p.Ile102Leu
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8266A>T
  hgvsp: ENSP00000349629.3:p.Ile2756Leu
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1525A>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4191A>T
  hgvsp: ENSP00000426669.1:p.Ile1398Leu
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39679
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9167
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile2756Leu
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

4-151203686-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203686
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203686
    reference: chr 4
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8265C>T
  hgvsp: ENST00000357115.3:c.8265C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8229C>T
  hgvsp: ENST00000510413.1:c.8229C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2322C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.302C>T
  hgvsp: ENST00000508606.1:c.302C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8232C>T
  hgvsp: ENST00000535741.1:c.8232C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.613C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4190C>T
  hgvsp: ENST00000509835.1:c.4190C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1524C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9167
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val2755Val
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

4-151203689-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203689
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203689
    reference: chr 4
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8226T>C
  hgvsp: ENST00000510413.1:c.8226T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8262T>C
  hgvsp: ENST00000357115.3:c.8262T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1521T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.299T>C
  hgvsp: ENST00000508606.1:c.299T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2319T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.610T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4187T>C
  hgvsp: ENST00000509835.1:c.4187T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8229T>C
  hgvsp: ENST00000535741.1:c.8229T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Cys2754Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/4-151203690-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203690
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203690
    reference: chr 4
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1520G>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8261G>T
  hgvsp: ENSP00000349629.3:p.Cys2754Phe
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8228G>T
  hgvsp: ENSP00000446299.1:p.Cys2743Phe
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8225G>T
  hgvsp: ENSP00000421552.1:p.Cys2742Phe
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.609G>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4186G>T
  hgvsp: ENSP00000426669.1:p.Cys1396Phe
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.298G>T
  hgvsp: ENSP00000425852.1:p.Cys100Phe
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2318G>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39681
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Cys2754Phe
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

4-151203692-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203692
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203692
    reference: chr 4
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8259T>C
  hgvsp: ENST00000357115.3:c.8259T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4184T>C
  hgvsp: ENST00000509835.1:c.4184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.607T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8226T>C
  hgvsp: ENST00000535741.1:c.8226T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8223T>C
  hgvsp: ENST00000510413.1:c.8223T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.296T>C
  hgvsp: ENST00000508606.1:c.296T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2316T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1518T>C
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28532
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His2753His
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

4-151203694-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203694
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203694
    reference: chr 4
allele count: 11
allele frequency: 9.060059961124106e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.605C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1516C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8224C>T
  hgvsp: ENSP00000446299.1:p.His2742Tyr
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4182C>T
  hgvsp: ENSP00000426669.1:p.His1395Tyr
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8257C>T
  hgvsp: ENSP00000349629.3:p.His2753Tyr
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8221C>T
  hgvsp: ENSP00000421552.1:p.His2741Tyr
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.294C>T
  hgvsp: ENSP00000425852.1:p.His99Tyr
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2314C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His2753Tyr
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

4-151203698-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203698
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203698
    reference: chr 4
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4178G>A
  hgvsp: ENST00000509835.1:c.4178G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8253G>A
  hgvsp: ENST00000357115.3:c.8253G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8217G>A
  hgvsp: ENST00000510413.1:c.8217G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8220G>A
  hgvsp: ENST00000535741.1:c.8220G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1512G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.290G>A
  hgvsp: ENST00000508606.1:c.290G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.601G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2310G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3656
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 39690
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2754
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu2751Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

4-151203707-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203707
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203707
    reference: chr 4
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2301T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8244T>C
  hgvsp: ENST00000357115.3:c.8244T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8208T>C
  hgvsp: ENST00000510413.1:c.8208T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8211T>C
  hgvsp: ENST00000535741.1:c.8211T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1503T>C
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.281T>C
  hgvsp: ENST00000508606.1:c.281T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4169T>C
  hgvsp: ENST00000509835.1:c.4169T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.592T>C
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39691
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala2748Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

4-151203718-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203718
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203718
    reference: chr 4
allele count: 39
allele frequency: 3.212255992092908e-4
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8233C>T
  hgvsp: ENSP00000349629.3:p.Leu2745Phe
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8197C>T
  hgvsp: ENSP00000421552.1:p.Leu2733Phe
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8200C>T
  hgvsp: ENSP00000446299.1:p.Leu2734Phe
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.270C>T
  hgvsp: ENSP00000425852.1:p.Leu91Phe
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2290C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4158C>T
  hgvsp: ENSP00000426669.1:p.Leu1387Phe
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.581C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1492C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9168
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2256
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu2745Phe
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

4-151203735-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203735
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203735
    reference: chr 4
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.564A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2273A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.253A>G
  hgvsp: ENSP00000425852.1:p.Asn85Ser
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8183A>G
  hgvsp: ENSP00000446299.1:p.Asn2728Ser
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8180A>G
  hgvsp: ENSP00000421552.1:p.Asn2727Ser
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1475A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4141A>G
  hgvsp: ENSP00000426669.1:p.Asn1381Ser
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8216A>G
  hgvsp: ENSP00000349629.3:p.Asn2739Ser
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3627
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asn2739Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/4-151203750-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203750
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203750
    reference: chr 4
allele count: 2
allele frequency: 1.648261084555794e-5
allele num: 121340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8168T>G
  hgvsp: ENSP00000446299.1:p.Leu2723Trp
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4126T>G
  hgvsp: ENSP00000426669.1:p.Leu1376Trp
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.549T>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1460T>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2258T>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.238T>G
  hgvsp: ENSP00000425852.1:p.Leu80Trp
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8201T>G
  hgvsp: ENSP00000349629.3:p.Leu2734Trp
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8165T>G
  hgvsp: ENSP00000421552.1:p.Leu2722Trp
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9153
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu2734Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

4-151203767-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203767
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203767
    reference: chr 4
allele count: 1
allele frequency: 8.24905548314718e-6
allele num: 121226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1443A>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8151A>T
  hgvsp: ENST00000535741.1:c.8151A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.221A>T
  hgvsp: ENST00000508606.1:c.221A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2241A>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4109A>T
  hgvsp: ENST00000509835.1:c.4109A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8148A>T
  hgvsp: ENST00000510413.1:c.8148A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8184A>T
  hgvsp: ENST00000357115.3:c.8184A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.532A>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3620
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly2728Gly
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

4-151203769-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203769
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203769
    reference: chr 4
allele count: 1
allele frequency: 8.25082508250825e-6
allele num: 121200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8149G>A
  hgvsp: ENSP00000446299.1:p.Gly2717Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.530G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8182G>A
  hgvsp: ENSP00000349629.3:p.Gly2728Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8146G>A
  hgvsp: ENSP00000421552.1:p.Gly2716Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2239G>A
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4107G>A
  hgvsp: ENSP00000426669.1:p.Gly1370Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.219G>A
  hgvsp: ENSP00000425852.1:p.Gly74Arg
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1441G>A
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28464
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly2728Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD

4-151203785-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203785
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203785
    reference: chr 4
allele count: 1
allele frequency: 8.277597510098669e-6
allele num: 120808
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.514C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.203C>T
  hgvsp: ENST00000508606.1:c.203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8130C>T
  hgvsp: ENST00000510413.1:c.8130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4091C>T
  hgvsp: ENST00000509835.1:c.4091C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1425C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8166C>T
  hgvsp: ENST00000357115.3:c.8166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8133C>T
  hgvsp: ENST00000535741.1:c.8133C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2223C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2719
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu2722Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

4-151203791-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203791
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203791
    reference: chr 4
allele count: 1
allele frequency: 8.316008316008316e-6
allele num: 120250
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1419A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2217A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.508A>G
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8127A>G
  hgvsp: ENST00000535741.1:c.8127A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4085A>G
  hgvsp: ENST00000509835.1:c.4085A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8160A>G
  hgvsp: ENST00000357115.3:c.8160A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8124A>G
  hgvsp: ENST00000510413.1:c.8124A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.197A>G
  hgvsp: ENST00000508606.1:c.197A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4508
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3604
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38522
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro2720Pro
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum

4-151203806-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 151203806
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 151203806
    reference: chr 4
allele count: 1
allele frequency: 8.489685032685287e-6
allele num: 117790
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000425852
  ensembl transcript: ENST00000508606
  gene symbol: LRBA
  hgvsc: ENST00000508606.1:c.190-8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000426669
  ensembl transcript: ENST00000509835
  gene symbol: LRBA
  hgvsc: ENST00000509835.1:c.4078-8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000421552
  ensembl transcript: ENST00000510413
  gene symbol: LRBA
  hgvsc: ENST00000510413.1:c.8117-8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000515096
  gene symbol: LRBA
  hgvsc: ENST00000515096.1:n.1412-8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000349629
  ensembl transcript: ENST00000357115
  gene symbol: LRBA
  hgvsc: ENST00000357115.3:c.8153-8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000510157
  gene symbol: LRBA
  hgvsc: ENST00000510157.1:n.501-8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl protein: ENSP00000446299
  ensembl transcript: ENST00000535741
  gene symbol: LRBA
  hgvsc: ENST00000535741.1:c.8120-8C>T
  variant of: http://identifiers.org/hgnc/1742
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198589
  ensembl transcript: ENST00000503716
  gene symbol: LRBA
  hgvsc: ENST00000503716.1:n.2210-8C>T
  variant of: http://identifiers.org/hgnc/1742
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 1.25e1
  variant carriers: 0
hgvs: c.8153-8C>T
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 2578
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10481
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3274
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33411
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1353
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4064
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.05275822655357e-4
allele num: 66492
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.656237929702588e-5
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.684e1

DP
type: SiteQuality
SIO_000300: 1.858113e6

QD
type: SiteQuality
SIO_000300: 6.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.206e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 1.10671e2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.15e-1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4080
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3740
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10562
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2583
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3297
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.5036768016328e-5
allele num: 66634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.517e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.986e1

MQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

DP
type: SiteQuality
SIO_000300: 1.846629e6

FS
type: SiteQuality
SIO_000300: 1.188e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
all individuals: 3724
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33806
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4075
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314279102059708e-4
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.395e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.34e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

DP
type: SiteQuality
SIO_000300: 1.845493e6

QD
type: SiteQuality
SIO_000300: 1.255e1

GenotypeQuality
all individuals: 10566
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3721
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3296
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 968
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33811
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.827e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.35e-1

QD
type: SiteQuality
SIO_000300: 1.188e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 1.845177e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.321e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.47e-1

GenotypeQuality
all individuals: 165
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4069
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10554
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3718
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33791
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2578
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.075e1

MQRankSum
type: SiteQuality
SIO_000300: -3.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.67e-1

FS
type: SiteQuality
SIO_000300: 3.696e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.902e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

DP
type: SiteQuality
SIO_000300: 1.844504e6

GenotypeQuality
all individuals: 168
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3291
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2578
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4070
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501636784094663e-5
allele num: 66594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: -6.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.202e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

QD
type: SiteQuality
SIO_000300: 1.347e1

DP
type: SiteQuality
SIO_000300: 1.844455e6

GenotypeQuality
all individuals: 3289
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33779
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3713
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1357
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.274e0

FS
type: SiteQuality
SIO_000300: 4.456e0

MQRankSum
type: SiteQuality
SIO_000300: 5.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.066e1

DP
type: SiteQuality
SIO_000300: 1.844146e6

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3286
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33842
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3715
bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422774076317383e-4
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.975e0

MQRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.11e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 1.844206e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.31e-1

QD
type: SiteQuality
SIO_000300: 9.65e0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3279
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10537
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33808
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3698
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.43e-1

DP
type: SiteQuality
SIO_000300: 1.842553e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.203e0

FS
type: SiteQuality
SIO_000300: 6.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.33e-1

QD
type: SiteQuality
SIO_000300: 1.199e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQRankSum
type: SiteQuality
SIO_000300: -3.78e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66514
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.03e-1

MQRankSum
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SIO_000300: 6.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.81e-1

FS
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SIO_000300: 0.0e0

DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.999e0

QD
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SIO_000300: 1.555e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503442884204829e-5
allele num: 66514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 1.841583e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.555e1

VQSLOD
type: SiteQuality
SIO_000300: 4.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.999e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

Latino
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allele count: 5
allele frequency: 4.326007959854646e-4
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 113
allele frequency: 1.093901258470474e-2
allele num: 10330
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66356
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 6.63e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.38e0

DP
type: SiteQuality
SIO_000300: 1.834581e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 7.763975155279503e-4
allele num: 10304
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.321e0

DP
type: SiteQuality
SIO_000300: 1.822637e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

QD
type: SiteQuality
SIO_000300: 1.295e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
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SIO_000300: -2.499e0

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.64e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.680555555555556e-5
allele num: 11520
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.2271714922049e-3
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51372952680815e-5
allele num: 66062
num of homozygotes: 0

QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

DP
type: SiteQuality
SIO_000300: 1.809486e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65982
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.773260359655981e-5
allele num: 10232
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.800022e6

MQRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: 6.909999999999999e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65982
num of homozygotes: 0

South Asian
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele num: 10232
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QD
type: SiteQuality
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MQ
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ClippingRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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num of homozygotes: 0

Latino
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele num: 8590
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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FS
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MQ
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QD
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DP
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65962
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.685079034219212e-5
allele num: 11514
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.798828e6

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.98e-1

FS
type: SiteQuality
SIO_000300: 1.901e0

QD
type: SiteQuality
SIO_000300: 6.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.097e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.52522725886157e-5
allele num: 65564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11462
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.522e0

VQSLOD
type: SiteQuality
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QD
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ClippingRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.712957e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.613e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.869719699960521e-5
allele num: 10132
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65546
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16078
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.016e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.921e0

FS
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SIO_000300: 4.03e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

DP
type: SiteQuality
SIO_000300: 1.696367e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16016
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10096
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.647447e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.91e-1

MQ
type: SiteQuality
SIO_000300: 5.811e1

VQSLOD
type: SiteQuality
SIO_000300: -2.155e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 7.79e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15912
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535107918086642e-5
allele num: 65142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: -2.091e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

DP
type: SiteQuality
SIO_000300: 1.58662e6

VQSLOD
type: SiteQuality
SIO_000300: -1.251e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.271e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64830
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.004419445560466e-4
allele num: 9956
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15788
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

DP
type: SiteQuality
SIO_000300: 1.542818e6

QD
type: SiteQuality
SIO_000300: 7.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.975e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.923570146191331e-4
allele num: 15596
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64412
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: -2.632e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e0

ClippingRankSum
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SIO_000300: -1.399e0

MQ
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
SIO_000300: 1.522598e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.764913519237557e-4
allele num: 11332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.087024038760171e-4
allele num: 64396
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.184553423359394e-4
allele num: 8442
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African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.75e0

DP
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

South Asian
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African
type: Population
allele count: 0
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QD
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.185e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.49e-1

DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9139
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.85e-1

FS
type: SiteQuality
SIO_000300: 1.277e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.232e0

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.131e1

VQSLOD
type: SiteQuality
SIO_000300: 5.42e-1

DP
type: SiteQuality
SIO_000300: 1.858321e6

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2773
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 52
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2278
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.995203836930456e-5
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 5.81e-1

FS
type: SiteQuality
SIO_000300: 7.41e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.55e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.134e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.858202e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.23e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.46e-1

DP
type: SiteQuality
SIO_000300: 1.858544e6

FS
type: SiteQuality
SIO_000300: 1.643e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.91e0

QD
type: SiteQuality
SIO_000300: 1.136e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1633
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.858699e6

MQRankSum
type: SiteQuality
SIO_000300: 2.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.25e0

FS
type: SiteQuality
SIO_000300: 2.133e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.896e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.491e1

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.716e1

MQRankSum
type: SiteQuality
SIO_000300: -1.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.05e-1

FS
type: SiteQuality
SIO_000300: 3.937e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

DP
type: SiteQuality
SIO_000300: 1.85877e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e0

GenotypeQuality
all individuals: 39439
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9144
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.542e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

QD
type: SiteQuality
SIO_000300: 1.921e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.568e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-2

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

DP
type: SiteQuality
SIO_000300: 1.858891e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.23e1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

FS
type: SiteQuality
SIO_000300: 2.616e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

DP
type: SiteQuality
SIO_000300: 1.859133e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.479e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9149
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.31e-1

QD
type: SiteQuality
SIO_000300: 1.344e1

MQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

DP
type: SiteQuality
SIO_000300: 1.85922e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 5.999e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997242536866083e-5
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.859287e6

FS
type: SiteQuality
SIO_000300: 8.002000000000001e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 901
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GenotypeQuality
all individuals: 636
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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FS
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DP
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VQSLOD
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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Other
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European (Non-Finnish)
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allele frequency: 4.495459585818323e-5
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num of homozygotes: 0

ReadPosRankSum
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DP
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FS
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BaseQRankSum
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VQSLOD
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QD
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ClippingRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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South Asian
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allele count: 1
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allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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VQSLOD
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ClippingRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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FS
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QD
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.638562543192812e-5
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num of homozygotes: 0

South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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MQRankSum
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MQ
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DP
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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QD
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SIO_000300: 1.236e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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DP
type: SiteQuality
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ClippingRankSum
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MQRankSum
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MQ
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BaseQRankSum
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QD
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FS
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InbreedingCoeff
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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num of homozygotes: 0

European (Finnish)
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Other
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African
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VQSLOD
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ClippingRankSum
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FS
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MQ
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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South Asian
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European (Finnish)
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African
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Latino
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East Asian
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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MQRankSum
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ClippingRankSum
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DP
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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Other
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South Asian
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FS
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QD
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Latino
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European (Non-Finnish)
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African
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Other
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South Asian
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FS
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InbreedingCoeff
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QD
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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allele num: 66738
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African
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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Latino
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allele num: 11578
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Other
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South Asian
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DP
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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FS
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QD
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MQ
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
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Other
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South Asian
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African
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Latino
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East Asian
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allele num: 8654
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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QD
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MQ
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FS
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DP
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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Latino
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East Asian
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Other
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MQRankSum
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FS
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InbreedingCoeff
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DP
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MQ
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66740
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South Asian
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Latino
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num of homozygotes: 0

European (Finnish)
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Other
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East Asian
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allele frequency: 0.0e0
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FS
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ReadPosRankSum
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QD
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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VQSLOD
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MQRankSum
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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QD
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10406
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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Latino
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allele frequency: 0.0e0
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Other
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East Asian
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VQSLOD
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MQ
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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allele frequency: 4.239341085271318e-4
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East Asian
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European (Non-Finnish)
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allele num: 66740
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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MQ
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DP
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MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Latino
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South Asian
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African
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ReadPosRankSum
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VQSLOD
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DP
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QD
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MQRankSum
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MQ
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InbreedingCoeff
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FS
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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BaseQRankSum
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MQRankSum
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MQ
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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QD
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.211240310077519e-4
allele num: 16512
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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ClippingRankSum
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DP
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FS
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BaseQRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
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African
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.155535012710885e-3
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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DP
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MQ
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BaseQRankSum
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FS
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VQSLOD
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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FS
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DP
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MQRankSum
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MQ
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BaseQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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ReadPosRankSum
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DP
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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Other
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African
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East Asian
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South Asian
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European (Non-Finnish)
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QD
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MQ
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InbreedingCoeff
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VQSLOD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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Other
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European (Non-Finnish)
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European (Finnish)
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Latino
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QD
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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Other
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VQSLOD
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MQ
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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FS
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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Latino
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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DP
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FS
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MQ
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ReadPosRankSum
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InbreedingCoeff
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QD
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VQSLOD
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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South Asian
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European (Finnish)
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Other
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Latino
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African
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FS
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQRankSum
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QD
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ReadPosRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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African
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South Asian
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ClippingRankSum
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BaseQRankSum
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DP
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MQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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QD
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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South Asian
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allele frequency: 2.119670542635659e-3
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East Asian
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European (Non-Finnish)
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allele frequency: 5.993586862057598e-5
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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MQ
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FS
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498486528606108e-5
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BaseQRankSum
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InbreedingCoeff
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DP
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FS
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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MQ
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MQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.998231043684226e-5
allele num: 66706
num of homozygotes: 0

Other
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African
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allele frequency: 0.0e0
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Latino
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East Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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DP
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InbreedingCoeff
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VQSLOD
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FS
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ClippingRankSum
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BaseQRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.499880009599232e-5
allele num: 66672
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African
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South Asian
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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FS
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DP
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QD
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BaseQRankSum
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

South Asian
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East Asian
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European (Non-Finnish)
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Latino
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Other
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African
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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DP
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QD
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Latino
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African
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East Asian
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European (Finnish)
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MQ
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BaseQRankSum
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DP
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ReadPosRankSum
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QD
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ClippingRankSum
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FS
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VQSLOD
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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Other
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East Asian
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European (Finnish)
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European (Non-Finnish)
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InbreedingCoeff
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MQRankSum
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
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VQSLOD
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MQ
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QD
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BaseQRankSum
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