7-55540679-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540679
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540679
    reference: chr 7
allele count: 2
allele frequency: 1.714442463310931e-5
allele num: 116656
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.187G>C
  hgvsp: ENSP00000413948.1:p.Val63Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.199G>C
  hgvsp: ENSP00000411447.1:p.Val67Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.337G>C
  hgvsp: ENSP00000393210.1:p.Val113Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.187G>C
  hgvsp: ENSP00000389601.1:p.Val63Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.187G>C
  hgvsp: ENSP00000395533.1:p.Val63Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.187G>C
  hgvsp: ENSP00000407579.1:p.Val63Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.379G>C
  hgvsp: ENSP00000446442.1:p.Val127Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.388G>C
  hgvsp: ENSP00000285279.5:p.Val130Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.382G>C
  hgvsp: ENSP00000407356.1:p.Val128Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.361G>C
  hgvsp: ENSP00000415230.1:p.Val121Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.187G>C
  hgvsp: ENSP00000416530.1:p.Val63Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19296G>C
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41939
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val130Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

7-55540681-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540681
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540681
    reference: chr 7
allele count: 1
allele frequency: 8.547592997811816e-6
allele num: 116992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.185C>T
  hgvsp: ENSP00000395533.1:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.377C>T
  hgvsp: ENSP00000446442.1:p.Pro126Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19294C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.359C>T
  hgvsp: ENSP00000415230.1:p.Pro120Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.185C>T
  hgvsp: ENSP00000413948.1:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.335C>T
  hgvsp: ENSP00000393210.1:p.Pro112Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.386C>T
  hgvsp: ENSP00000285279.5:p.Pro129Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.185C>T
  hgvsp: ENSP00000389601.1:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.185C>T
  hgvsp: ENSP00000407579.1:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.197C>T
  hgvsp: ENSP00000411447.1:p.Pro66Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.380C>T
  hgvsp: ENSP00000407356.1:p.Pro127Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.185C>T
  hgvsp: ENSP00000416530.1:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro129Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/7-55540690-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540690
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540690
    reference: chr 7
allele count: 1
allele frequency: 8.466970348669839e-6
allele num: 118106
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.176G>T
  hgvsp: ENSP00000407579.1:p.Gly59Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.326G>T
  hgvsp: ENSP00000393210.1:p.Gly109Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19285G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.371G>T
  hgvsp: ENSP00000407356.1:p.Gly124Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.176G>T
  hgvsp: ENSP00000416530.1:p.Gly59Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.377G>T
  hgvsp: ENSP00000285279.5:p.Gly126Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.368G>T
  hgvsp: ENSP00000446442.1:p.Gly123Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.176G>T
  hgvsp: ENSP00000413948.1:p.Gly59Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.176G>T
  hgvsp: ENSP00000389601.1:p.Gly59Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.176G>T
  hgvsp: ENSP00000395533.1:p.Gly59Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.188G>T
  hgvsp: ENSP00000411447.1:p.Gly63Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.350G>T
  hgvsp: ENSP00000415230.1:p.Gly117Val
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11731
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly126Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

7-55540691-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540691
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540691
    reference: chr 7
allele count: 8
allele frequency: 6.764298034971421e-5
allele num: 118268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.349G>A
  hgvsp: ENSP00000415230.1:p.Gly117Arg
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.187G>A
  hgvsp: ENSP00000411447.1:p.Gly63Arg
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.175G>A
  hgvsp: ENSP00000407579.1:p.Gly59Arg
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.175G>A
  hgvsp: ENSP00000389601.1:p.Gly59Arg
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.175G>A
  hgvsp: ENSP00000413948.1:p.Gly59Arg
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.325G>A
  hgvsp: ENSP00000393210.1:p.Gly109Arg
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.370G>A
  hgvsp: ENSP00000407356.1:p.Gly124Arg
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.175G>A
  hgvsp: ENSP00000416530.1:p.Gly59Arg
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.175G>A
  hgvsp: ENSP00000395533.1:p.Gly59Arg
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.376G>A
  hgvsp: ENSP00000285279.5:p.Gly126Arg
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.367G>A
  hgvsp: ENSP00000446442.1:p.Gly123Arg
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19284G>A
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11797
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly126Arg
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

7-55540692-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540692
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540692
    reference: chr 7
allele count: 13
allele frequency: 1.098344035147009e-4
allele num: 118360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.174G>A
  hgvsp: ENST00000414113.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.186G>A
  hgvsp: ENST00000454227.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.174G>A
  hgvsp: ENST00000453256.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19283G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.366G>A
  hgvsp: ENST00000545390.1:c.366G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.375G>A
  hgvsp: ENST00000285279.5:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.324G>A
  hgvsp: ENST00000418904.1:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.348G>A
  hgvsp: ENST00000433959.1:c.348G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.369G>A
  hgvsp: ENST00000427700.1:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.174G>A
  hgvsp: ENST00000455023.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.174G>A
  hgvsp: ENST00000428648.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.174G>A
  hgvsp: ENST00000428097.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11848
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro125Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

7-55540693-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540693
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540693
    reference: chr 7
allele count: 4
allele frequency: 3.376952300548755e-5
allele num: 118450
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.347C>T
  hgvsp: ENSP00000415230.1:p.Pro116Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.185C>T
  hgvsp: ENSP00000411447.1:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.323C>T
  hgvsp: ENSP00000393210.1:p.Pro108Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.173C>T
  hgvsp: ENSP00000395533.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.365C>T
  hgvsp: ENSP00000446442.1:p.Pro122Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.173C>T
  hgvsp: ENSP00000407579.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.173C>T
  hgvsp: ENSP00000416530.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.368C>T
  hgvsp: ENSP00000407356.1:p.Pro123Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.173C>T
  hgvsp: ENSP00000413948.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.173C>T
  hgvsp: ENSP00000389601.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19282C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.374C>T
  hgvsp: ENSP00000285279.5:p.Pro125Leu
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42107
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro125Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/7-55540696-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540696
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540696
    reference: chr 7
allele count: 2
allele frequency: 1.684636118598383e-5
allele num: 118720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19279G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.182G>T
  hgvsp: ENSP00000411447.1:p.Gly61Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.365G>T
  hgvsp: ENSP00000407356.1:p.Gly122Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.170G>T
  hgvsp: ENSP00000413948.1:p.Gly57Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.362G>T
  hgvsp: ENSP00000446442.1:p.Gly121Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.371G>T
  hgvsp: ENSP00000285279.5:p.Gly124Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.170G>T
  hgvsp: ENSP00000416530.1:p.Gly57Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.170G>T
  hgvsp: ENSP00000395533.1:p.Gly57Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.170G>T
  hgvsp: ENSP00000407579.1:p.Gly57Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.320G>T
  hgvsp: ENSP00000393210.1:p.Gly107Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.344G>T
  hgvsp: ENSP00000415230.1:p.Gly115Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.170G>T
  hgvsp: ENSP00000389601.1:p.Gly57Val
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly124Val
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

7-55540706-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540706
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540706
    reference: chr 7
allele count: 1
allele frequency: 8.375630266177531e-6
allele num: 119394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.310G>C
  hgvsp: ENSP00000393210.1:p.Asp104His
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.334G>C
  hgvsp: ENSP00000415230.1:p.Asp112His
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.160G>C
  hgvsp: ENSP00000413948.1:p.Asp54His
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.160G>C
  hgvsp: ENSP00000407579.1:p.Asp54His
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.160G>C
  hgvsp: ENSP00000416530.1:p.Asp54His
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19269G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.355G>C
  hgvsp: ENSP00000407356.1:p.Asp119His
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.160G>C
  hgvsp: ENSP00000395533.1:p.Asp54His
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.172G>C
  hgvsp: ENSP00000411447.1:p.Asp58His
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.160G>C
  hgvsp: ENSP00000389601.1:p.Asp54His
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.361G>C
  hgvsp: ENSP00000285279.5:p.Asp121His
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.352G>C
  hgvsp: ENSP00000446442.1:p.Asp118His
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp121His
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

7-55540706-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540706
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540706
    reference: chr 7
allele count: 6
allele frequency: 5.025378159706518e-5
allele num: 119394
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.361G>A
  hgvsp: ENSP00000285279.5:p.Asp121Asn
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.160G>A
  hgvsp: ENSP00000389601.1:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.352G>A
  hgvsp: ENSP00000446442.1:p.Asp118Asn
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.160G>A
  hgvsp: ENSP00000395533.1:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.355G>A
  hgvsp: ENSP00000407356.1:p.Asp119Asn
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.334G>A
  hgvsp: ENSP00000415230.1:p.Asp112Asn
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.172G>A
  hgvsp: ENSP00000411447.1:p.Asp58Asn
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.310G>A
  hgvsp: ENSP00000393210.1:p.Asp104Asn
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19269G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.160G>A
  hgvsp: ENSP00000416530.1:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.160G>A
  hgvsp: ENSP00000407579.1:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.160G>A
  hgvsp: ENSP00000413948.1:p.Asp54Asn
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp121Asn
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

7-55540707-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540707
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540707
    reference: chr 7
allele count: 42050
allele frequency: 3.506738274734805e-1
allele num: 119912
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.360C>T
  hgvsp: ENST00000285279.5:c.360C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.159C>T
  hgvsp: ENST00000453256.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.354C>T
  hgvsp: ENST00000427700.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.159C>T
  hgvsp: ENST00000428097.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.351C>T
  hgvsp: ENST00000545390.1:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.309C>T
  hgvsp: ENST00000418904.1:c.309C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.171C>T
  hgvsp: ENST00000454227.1:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.159C>T
  hgvsp: ENST00000455023.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.159C>T
  hgvsp: ENST00000428648.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.159C>T
  hgvsp: ENST00000414113.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.333C>T
  hgvsp: ENST00000433959.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19268C>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 8.25e1
  variant carriers: 1003
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 3.25e1
  variant carriers: 1825
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 6.25e1
  variant carriers: 2839
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.75e1
  variant carriers: 438
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 5.75e1
  variant carriers: 3237
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.75e1
  variant carriers: 1301
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 8.75e1
  variant carriers: 754
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 2.75e1
  variant carriers: 1309
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.25e1
  variant carriers: 556
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 4.25e1
  variant carriers: 3182
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 5.25e1
  variant carriers: 3470
genotype depth: GenotypeDepth
  all individuals: 19346
  bin: 2.25e1
  variant carriers: 758
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 3.75e1
  variant carriers: 2652
genotype quality: GenotypeQuality
hgvs: p.Thr120Thr
num of homozygotes: 8114
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

7-55540708-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540708
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540708
    reference: chr 7
allele count: 4
allele frequency: 3.335946491418278e-5
allele num: 119906
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19267C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.170C>T
  hgvsp: ENSP00000411447.1:p.Thr57Ile
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.158C>T
  hgvsp: ENSP00000413948.1:p.Thr53Ile
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.158C>T
  hgvsp: ENSP00000395533.1:p.Thr53Ile
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.308C>T
  hgvsp: ENSP00000393210.1:p.Thr103Ile
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.158C>T
  hgvsp: ENSP00000389601.1:p.Thr53Ile
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.332C>T
  hgvsp: ENSP00000415230.1:p.Thr111Ile
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.359C>T
  hgvsp: ENSP00000285279.5:p.Thr120Ile
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.158C>T
  hgvsp: ENST00000417399.1:c.158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.350C>T
  hgvsp: ENSP00000446442.1:p.Thr117Ile
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.158C>T
  hgvsp: ENSP00000416530.1:p.Thr53Ile
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.353C>T
  hgvsp: ENSP00000407356.1:p.Thr118Ile
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.158C>T
  hgvsp: ENSP00000407579.1:p.Thr53Ile
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10252
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18921
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr120Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

7-55540711-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540711
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540711
    reference: chr 7
allele count: 7
allele frequency: 5.837224816544363e-5
allele num: 119920
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.356A>C
  hgvsp: ENSP00000285279.5:p.Tyr119Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.347A>C
  hgvsp: ENSP00000446442.1:p.Tyr116Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.350A>C
  hgvsp: ENSP00000407356.1:p.Tyr117Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.155A>C
  hgvsp: ENSP00000413948.1:p.Tyr52Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.155A>C
  hgvsp: ENSP00000389601.1:p.Tyr52Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.305A>C
  hgvsp: ENSP00000393210.1:p.Tyr102Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.155A>C
  hgvsp: ENSP00000407579.1:p.Tyr52Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.155A>C
  hgvsp: ENSP00000395533.1:p.Tyr52Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.167A>C
  hgvsp: ENSP00000411447.1:p.Tyr56Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.155A>C
  hgvsp: ENSP00000416530.1:p.Tyr52Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.155A>C
  hgvsp: ENSP00000411737.1:p.Tyr52Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19264A>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.329A>C
  hgvsp: ENSP00000415230.1:p.Tyr110Ser
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22037
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr119Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

7-55540714-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540714
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540714
    reference: chr 7
allele count: 13
allele frequency: 1.08418260971094e-4
allele num: 119906
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.353A>G
  hgvsp: ENSP00000285279.5:p.Tyr118Cys
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.302A>G
  hgvsp: ENSP00000393210.1:p.Tyr101Cys
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19261A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.164A>G
  hgvsp: ENSP00000411447.1:p.Tyr55Cys
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.152A>G
  hgvsp: ENSP00000411737.1:p.Tyr51Cys
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.152A>G
  hgvsp: ENSP00000407579.1:p.Tyr51Cys
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.152A>G
  hgvsp: ENSP00000413948.1:p.Tyr51Cys
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.152A>G
  hgvsp: ENSP00000395533.1:p.Tyr51Cys
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.347A>G
  hgvsp: ENSP00000407356.1:p.Tyr116Cys
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.344A>G
  hgvsp: ENSP00000446442.1:p.Tyr115Cys
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.326A>G
  hgvsp: ENSP00000415230.1:p.Tyr109Cys
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.152A>G
  hgvsp: ENSP00000416530.1:p.Tyr51Cys
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.152A>G
  hgvsp: ENSP00000389601.1:p.Tyr51Cys
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr118Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

7-55540716-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540716
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540716
    reference: chr 7
allele count: 1
allele frequency: 8.34306691139663e-6
allele num: 119860
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.150C>T
  hgvsp: ENST00000453256.1:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.150C>T
  hgvsp: ENST00000417399.1:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.300C>T
  hgvsp: ENST00000418904.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.342C>T
  hgvsp: ENST00000545390.1:c.342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.162C>T
  hgvsp: ENST00000454227.1:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.150C>T
  hgvsp: ENST00000414113.1:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.345C>T
  hgvsp: ENST00000427700.1:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.150C>T
  hgvsp: ENST00000455023.1:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.351C>T
  hgvsp: ENST00000285279.5:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.324C>T
  hgvsp: ENST00000433959.1:c.324C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19259C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.150C>T
  hgvsp: ENST00000428097.1:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.150C>T
  hgvsp: ENST00000428648.1:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro117Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-55540719-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540719
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540719
    reference: chr 7
allele count: 1
allele frequency: 8.342927700188551e-6
allele num: 119862
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19256G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.147G>T
  hgvsp: ENST00000455023.1:c.147G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.159G>T
  hgvsp: ENST00000454227.1:c.159G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.348G>T
  hgvsp: ENST00000285279.5:c.348G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.321G>T
  hgvsp: ENST00000433959.1:c.321G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.147G>T
  hgvsp: ENST00000428097.1:c.147G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.147G>T
  hgvsp: ENST00000417399.1:c.147G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.342G>T
  hgvsp: ENST00000427700.1:c.342G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.147G>T
  hgvsp: ENST00000428648.1:c.147G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.147G>T
  hgvsp: ENST00000453256.1:c.147G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.147G>T
  hgvsp: ENST00000414113.1:c.147G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.297G>T
  hgvsp: ENST00000418904.1:c.297G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.339G>T
  hgvsp: ENST00000545390.1:c.339G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro116Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

7-55540719-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540719
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540719
    reference: chr 7
allele count: 3
allele frequency: 2.502878310056565e-5
allele num: 119862
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.147G>A
  hgvsp: ENST00000453256.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.147G>A
  hgvsp: ENST00000428648.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.147G>A
  hgvsp: ENST00000455023.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.159G>A
  hgvsp: ENST00000454227.1:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.342G>A
  hgvsp: ENST00000427700.1:c.342G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.339G>A
  hgvsp: ENST00000545390.1:c.339G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19256G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.147G>A
  hgvsp: ENST00000417399.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.321G>A
  hgvsp: ENST00000433959.1:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.147G>A
  hgvsp: ENST00000414113.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.348G>A
  hgvsp: ENST00000285279.5:c.348G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.147G>A
  hgvsp: ENST00000428097.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.297G>A
  hgvsp: ENST00000418904.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18931
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10226
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro116Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

7-55540720-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540720
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540720
    reference: chr 7
allele count: 6
allele frequency: 5.006341365729925e-5
allele num: 119848
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.146C>T
  hgvsp: ENSP00000407579.1:p.Pro49Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19255C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.296C>T
  hgvsp: ENSP00000393210.1:p.Pro99Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.320C>T
  hgvsp: ENSP00000415230.1:p.Pro107Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.338C>T
  hgvsp: ENSP00000446442.1:p.Pro113Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.158C>T
  hgvsp: ENSP00000411447.1:p.Pro53Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.146C>T
  hgvsp: ENSP00000395533.1:p.Pro49Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.146C>T
  hgvsp: ENSP00000413948.1:p.Pro49Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.146C>T
  hgvsp: ENSP00000411737.1:p.Pro49Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.347C>T
  hgvsp: ENSP00000285279.5:p.Pro116Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.146C>T
  hgvsp: ENSP00000389601.1:p.Pro49Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.146C>T
  hgvsp: ENSP00000416530.1:p.Pro49Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.341C>T
  hgvsp: ENSP00000407356.1:p.Pro114Leu
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro116Leu
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP

7-55540721-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540721
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540721
    reference: chr 7
allele count: 1
allele frequency: 8.345294922722569e-6
allele num: 119828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.157C>T
  hgvsp: ENSP00000411447.1:p.Pro53Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.319C>T
  hgvsp: ENSP00000415230.1:p.Pro107Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.295C>T
  hgvsp: ENSP00000393210.1:p.Pro99Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.337C>T
  hgvsp: ENSP00000446442.1:p.Pro113Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.145C>T
  hgvsp: ENSP00000389601.1:p.Pro49Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.346C>T
  hgvsp: ENSP00000285279.5:p.Pro116Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.145C>T
  hgvsp: ENSP00000411737.1:p.Pro49Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.145C>T
  hgvsp: ENSP00000395533.1:p.Pro49Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.145C>T
  hgvsp: ENSP00000407579.1:p.Pro49Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19254C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.145C>T
  hgvsp: ENSP00000416530.1:p.Pro49Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.145C>T
  hgvsp: ENSP00000413948.1:p.Pro49Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.340C>T
  hgvsp: ENSP00000407356.1:p.Pro114Ser
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10189
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro116Ser
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

7-55540725-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540725
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540725
    reference: chr 7
allele count: 2
allele frequency: 1.669281874937402e-5
allele num: 119812
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.153G>A
  hgvsp: ENST00000454227.1:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.141G>A
  hgvsp: ENST00000428097.1:c.141G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.141G>A
  hgvsp: ENST00000455023.1:c.141G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.141G>A
  hgvsp: ENST00000453256.1:c.141G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.141G>A
  hgvsp: ENST00000414113.1:c.141G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.141G>A
  hgvsp: ENST00000417399.1:c.141G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.336G>A
  hgvsp: ENST00000427700.1:c.336G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.141G>A
  hgvsp: ENST00000428648.1:c.141G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19250G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.333G>A
  hgvsp: ENST00000545390.1:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.342G>A
  hgvsp: ENST00000285279.5:c.342G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.291G>A
  hgvsp: ENST00000418904.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.315G>A
  hgvsp: ENST00000433959.1:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18875
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro114Pro
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-55540726-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540726
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540726
    reference: chr 7
allele count: 6
allele frequency: 5.008430858611997e-5
allele num: 119798
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.140C>T
  hgvsp: ENSP00000411737.1:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.140C>T
  hgvsp: ENSP00000416530.1:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.314C>T
  hgvsp: ENSP00000415230.1:p.Pro105Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.341C>T
  hgvsp: ENSP00000285279.5:p.Pro114Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.140C>T
  hgvsp: ENSP00000395533.1:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.152C>T
  hgvsp: ENSP00000411447.1:p.Pro51Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.140C>T
  hgvsp: ENSP00000413948.1:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.335C>T
  hgvsp: ENSP00000407356.1:p.Pro112Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19249C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.332C>T
  hgvsp: ENSP00000446442.1:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.140C>T
  hgvsp: ENSP00000389601.1:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.290C>T
  hgvsp: ENSP00000393210.1:p.Pro97Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.140C>T
  hgvsp: ENSP00000407579.1:p.Pro47Leu
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro114Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/7-55540738-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540738
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540738
    reference: chr 7
allele count: 4
allele frequency: 3.341073486911344e-5
allele num: 119722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140G>T
  hgvsp: ENSP00000411447.1:p.Gly47Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128G>T
  hgvsp: ENSP00000389601.1:p.Gly43Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323G>T
  hgvsp: ENSP00000407356.1:p.Gly108Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302G>T
  hgvsp: ENSP00000415230.1:p.Gly101Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320G>T
  hgvsp: ENSP00000446442.1:p.Gly107Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128G>T
  hgvsp: ENSP00000395533.1:p.Gly43Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128G>T
  hgvsp: ENSP00000416530.1:p.Gly43Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278G>T
  hgvsp: ENSP00000393210.1:p.Gly93Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128G>T
  hgvsp: ENSP00000411737.1:p.Gly43Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128G>T
  hgvsp: ENSP00000413948.1:p.Gly43Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329G>T
  hgvsp: ENSP00000285279.5:p.Gly110Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19237G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128G>T
  hgvsp: ENSP00000407579.1:p.Gly43Val
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3651
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly110Val
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

7-55540740-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540740
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540740
    reference: chr 7
allele count: 1
allele frequency: 8.35421888053467e-6
allele num: 119700
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302-2A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140-2A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329-2A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278-2A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19235A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320-2A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128-2A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128-2A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128-2A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323-2A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128-2A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128-2A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128-2A>G
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18740
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10013
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.329-2A>G
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

7-55540746-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540746
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540746
    reference: chr 7
allele count: 1
allele frequency: 8.359246999030327e-6
allele num: 119628
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329-8T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140-8T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128-8T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128-8T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128-8T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128-8T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302-8T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128-8T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278-8T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320-8T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323-8T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19229T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128-8T>C
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21496
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.329-8T>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/7-55540751-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540751
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540751
    reference: chr 7
allele count: 4
allele frequency: 3.34532073262524e-5
allele num: 119570
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128-13G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320-13G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128-13G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278-13G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128-13G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323-13G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128-13G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19224G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128-13G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128-13G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302-13G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140-13G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329-13G>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9931
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

7-55540751-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540751
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540751
    reference: chr 7
allele count: 1
allele frequency: 8.363301831563101e-6
allele num: 119570
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329-13G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128-13G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320-13G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302-13G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128-13G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323-13G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128-13G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128-13G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278-13G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140-13G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128-13G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128-13G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19224G>A
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

7-55540756-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540756
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540756
    reference: chr 7
allele count: 1
allele frequency: 8.370442294170824e-6
allele num: 119468
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320-18T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128-18T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140-18T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128-18T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323-18T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128-18T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128-18T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128-18T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329-18T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128-18T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302-18T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278-18T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19219T>C
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9846
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18262
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS

7-55540757-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540757
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540757
    reference: chr 7
allele count: 1
allele frequency: 8.371283150281276e-6
allele num: 119456
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278-19A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128-19A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128-19A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323-19A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128-19A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128-19A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19218A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128-19A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302-19A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140-19A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320-19A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128-19A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329-19A>G
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9848
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

7-55540759-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540759
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540759
    reference: chr 7
allele count: 1
allele frequency: 8.377875705836028e-6
allele num: 119362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19216C>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128-21C>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128-21C>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278-21C>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320-21C>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140-21C>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323-21C>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128-21C>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329-21C>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302-21C>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128-21C>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128-21C>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128-21C>A
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ

7-55540760-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540760
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540760
    reference: chr 7
allele count: 1
allele frequency: 8.377875705836028e-6
allele num: 119362
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329-22C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128-22C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128-22C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320-22C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128-22C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323-22C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140-22C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128-22C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278-22C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19215C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128-22C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302-22C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128-22C>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

7-55540774-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540774
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540774
    reference: chr 7
allele count: 1
allele frequency: 8.403220113947665e-6
allele num: 119002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140-36C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128-36C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278-36C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320-36C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128-36C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323-36C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128-36C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128-36C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329-36C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302-36C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128-36C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128-36C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19201C>G
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5999
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18465
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/7-55540779-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540779
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540779
    reference: chr 7
allele count: 45
allele frequency: 3.800868287244286e-4
allele num: 118394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128-41G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128-41G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323-41G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329-41G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140-41G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278-41G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320-41G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128-41G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128-41G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19196G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128-41G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128-41G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302-41G>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11829
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8583
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6892
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20926
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/7-55540783-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540783
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540783
    reference: chr 7
allele count: 1
allele frequency: 8.436825053995681e-6
allele num: 118528
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128-45T>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128-45T>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323-45T>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128-45T>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128-45T>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19192T>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140-45T>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320-45T>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128-45T>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302-45T>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329-45T>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128-45T>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278-45T>G
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8520
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21291
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

7-55540784-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55540784
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55540784
    reference: chr 7
allele count: 1
allele frequency: 8.435686327439601e-6
allele num: 118544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.128-46A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.128-46A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.329-46A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.128-46A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.140-46A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.320-46A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.128-46A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+19191A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.128-46A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.278-46A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.323-46A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.128-46A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.302-46A>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/7-55559930-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559930
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559930
    reference: chr 7
allele count: 1
allele frequency: 9.418679124439588e-6
allele num: 106172
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+45G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+45G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+45G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+45G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+45G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+45G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+45G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+45G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+45G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+45G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+45G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+45G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+45G>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10254
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

7-55559930-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559930
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559930
    reference: chr 7
allele count: 1331
allele frequency: 1.253626191462909e-2
allele num: 106172
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+45G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+45G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+45G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+45G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+45G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+45G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+45G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+45G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+45G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+45G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+45G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+45G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+45G>C
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16782
  bin: 2.25e1
  variant carriers: 311
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.75e1
  variant carriers: 146
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6298
  bin: 7.5e0
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12223
  bin: 1.25e1
  variant carriers: 292
genotype depth: GenotypeDepth
  all individuals: 10254
  bin: 1.75e1
  variant carriers: 404
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 3.25e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 3.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
num of homozygotes: 10
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

7-55559930-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559930
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559930
    reference: chr 7
allele count: 23
allele frequency: 2.166296198621105e-4
allele num: 106172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+45G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+45G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+45G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+45G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+45G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+45G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+45G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+45G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+45G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+45G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+45G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+45G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+45G>A
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10254
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16782
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6298
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12223
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

7-55559931-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559931
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559931
    reference: chr 7
allele count: 2
allele frequency: 1.877934272300469e-5
allele num: 106500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+44C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+44C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+44C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+44C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+44C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+44C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+44C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+44C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+44C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+44C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+44C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+44C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+44C>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9750
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum

7-55559931-G-GAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559931
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559933
    reference: chr 7
allele count: 1
allele frequency: 9.389671361502347e-6
allele num: 106500
alternate allele: GAC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+42_417+43dupGT
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+42_127+43dupGT
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+42_301+43dupGT
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+42_127+43dupGT
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+42_127+43dupGT
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+42_277+43dupGT
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+42_322+43dupGT
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+42_127+43dupGT
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+42_127+43dupGT
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+42_139+43dupGT
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+42_127+43dupGT
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+42_328+43dupGT
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+42_319+43dupGT
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 6399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12310
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9750
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

7-55559932-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559932
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559932
    reference: chr 7
allele count: 2
allele frequency: 1.874343979607137e-5
allele num: 106704
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+43T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+43T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+43T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+43T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+43T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+43T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+43T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+43T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+43T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+43T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+43T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+43T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+43T>C
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17603
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12299
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6420
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-55559935-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559935
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559935
    reference: chr 7
allele count: 1
allele frequency: 9.385265133740028e-6
allele num: 106550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+40G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+40G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+40G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+40G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+40G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+40G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+40G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+40G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+40G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+40G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+40G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+40G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+40G>A
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8718
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

7-55559937-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559937
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559937
    reference: chr 7
allele count: 2
allele frequency: 1.877863742206866e-5
allele num: 106504
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+38G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+38G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+38G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+38G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+38G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+38G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+38G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+38G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+38G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+38G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+38G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+38G>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+38G>C
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8518
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12275
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

7-55559940-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559940
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559940
    reference: chr 7
allele count: 2
allele frequency: 1.875855859235776e-5
allele num: 106618
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+35A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+35A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+35A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+35A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+35A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+35A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+35A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+35A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+35A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+35A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+35A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+35A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+35A>G
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6493
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7923
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

7-55559943-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559943
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559943
    reference: chr 7
allele count: 4
allele frequency: 3.76173190136739e-5
allele num: 106334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+32C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+32C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+32C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+32C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+32C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+32C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+32C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+32C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+32C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+32C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+32C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+32C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+32C>G
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6552
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12052
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19109
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

7-55559964-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559964
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559964
    reference: chr 7
allele count: 1
allele frequency: 9.402914903620123e-6
allele num: 106350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+11C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+11C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+11C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+11C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.575C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+11C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+11C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+11C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+11C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+11C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+11C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+11C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+11C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+11C>G
  variant of: http://identifiers.org/hgnc/34518
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11665
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6739
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/7-55559966-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559966
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559966
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 105834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+9G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+9G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+9G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+9G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+9G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+9G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.573G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+9G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+9G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+9G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+9G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+9G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+9G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+9G>T
  variant of: http://identifiers.org/hgnc/34518
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11795
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11580
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

7-55559966-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559966
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559966
    reference: chr 7
allele count: 1
allele frequency: 9.448759377893683e-6
allele num: 105834
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+9G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+9G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+9G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+9G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+9G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+9G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.573G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+9G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+9G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+9G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+9G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+9G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+9G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+9G>A
  variant of: http://identifiers.org/hgnc/34518
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11580
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21453
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

7-55559969-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559969
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559969
    reference: chr 7
allele count: 1
allele frequency: 9.452510586811858e-6
allele num: 105792
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+6C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+6C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+6C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+6C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+6C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+6C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+6C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+6C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+6C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+6C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.570C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+6C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+6C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+6C>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.328+6C>T
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

7-55559972-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559972
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559972
    reference: chr 7
allele count: 3
allele frequency: 2.837952889982026e-5
allele num: 105710
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.328+3C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.322+3C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.567C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.319+3C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.139+3C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.127+3C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.127+3C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.127+3C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.417+3C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.127+3C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.127+3C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.127+3C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.301+3C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.277+3C>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11913
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20972
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.328+3C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

7-55559976-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559976
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559976
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 105480
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.416A>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.126A>C
  hgvsp: ENST00000453256.1:c.126A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.318A>C
  hgvsp: ENST00000545390.1:c.318A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.126A>C
  hgvsp: ENST00000414113.1:c.126A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.126A>C
  hgvsp: ENST00000428097.1:c.126A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.300A>C
  hgvsp: ENST00000433959.1:c.300A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.126A>C
  hgvsp: ENST00000428648.1:c.126A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.138A>C
  hgvsp: ENST00000454227.1:c.138A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.126A>C
  hgvsp: ENST00000417399.1:c.126A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.327A>C
  hgvsp: ENST00000285279.5:c.327A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.563A>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.126A>C
  hgvsp: ENST00000455023.1:c.126A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.276A>C
  hgvsp: ENST00000418904.1:c.276A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.321A>C
  hgvsp: ENST00000427700.1:c.321A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.327A>C
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum

7-55559981-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559981
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559981
    reference: chr 7
allele count: 1
allele frequency: 9.529799683610651e-6
allele num: 104934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.121G>A
  hgvsp: ENSP00000395533.1:p.Gly41Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.271G>A
  hgvsp: ENSP00000393210.1:p.Gly91Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.133G>A
  hgvsp: ENSP00000411447.1:p.Gly45Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.558G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.121G>A
  hgvsp: ENSP00000389601.1:p.Gly41Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.295G>A
  hgvsp: ENSP00000415230.1:p.Gly99Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.121G>A
  hgvsp: ENSP00000411737.1:p.Gly41Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.316G>A
  hgvsp: ENSP00000407356.1:p.Gly106Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.121G>A
  hgvsp: ENSP00000413948.1:p.Gly41Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.121G>A
  hgvsp: ENSP00000416530.1:p.Gly41Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.322G>A
  hgvsp: ENSP00000285279.5:p.Gly108Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.411G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.313G>A
  hgvsp: ENSP00000446442.1:p.Gly105Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.121G>A
  hgvsp: ENSP00000407579.1:p.Gly41Ser
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12569
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11646
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19594
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly108Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

7-55559982-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559982
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559982
    reference: chr 7
allele count: 9
allele frequency: 8.602726108317881e-5
allele num: 104618
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.120C>T
  hgvsp: ENST00000417399.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.120C>T
  hgvsp: ENST00000428097.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.120C>T
  hgvsp: ENST00000453256.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.315C>T
  hgvsp: ENST00000427700.1:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.132C>T
  hgvsp: ENST00000454227.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.410C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.120C>T
  hgvsp: ENST00000455023.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.120C>T
  hgvsp: ENST00000414113.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.120C>T
  hgvsp: ENST00000428648.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.294C>T
  hgvsp: ENST00000433959.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.557C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.270C>T
  hgvsp: ENST00000418904.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.321C>T
  hgvsp: ENST00000285279.5:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.312C>T
  hgvsp: ENST00000545390.1:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7403
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro107Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

7-55559990-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559990
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559990
    reference: chr 7
allele count: 1
allele frequency: 9.640040873773305e-6
allele num: 103734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.112C>T
  hgvsp: ENSP00000395533.1:p.Pro38Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.112C>T
  hgvsp: ENSP00000407579.1:p.Pro38Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.286C>T
  hgvsp: ENSP00000415230.1:p.Pro96Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.124C>T
  hgvsp: ENSP00000411447.1:p.Pro42Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.112C>T
  hgvsp: ENSP00000413948.1:p.Pro38Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.402C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.307C>T
  hgvsp: ENSP00000407356.1:p.Pro103Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.112C>T
  hgvsp: ENSP00000389601.1:p.Pro38Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.262C>T
  hgvsp: ENSP00000393210.1:p.Pro88Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.313C>T
  hgvsp: ENSP00000285279.5:p.Pro105Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.112C>T
  hgvsp: ENSP00000411737.1:p.Pro38Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.112C>T
  hgvsp: ENSP00000416530.1:p.Pro38Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.304C>T
  hgvsp: ENSP00000446442.1:p.Pro102Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.549C>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17851
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13919
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro105Ser
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

7-55559999-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55559999
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55559999
    reference: chr 7
allele count: 4
allele frequency: 3.877847794474067e-5
allele num: 103150
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.277A>G
  hgvsp: ENSP00000415230.1:p.Arg93Gly
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.103A>G
  hgvsp: ENSP00000413948.1:p.Arg35Gly
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.393A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.253A>G
  hgvsp: ENSP00000393210.1:p.Arg85Gly
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.115A>G
  hgvsp: ENSP00000411447.1:p.Arg39Gly
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.295A>G
  hgvsp: ENSP00000446442.1:p.Arg99Gly
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.103A>G
  hgvsp: ENSP00000395533.1:p.Arg35Gly
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.103A>G
  hgvsp: ENSP00000407579.1:p.Arg35Gly
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.540A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.298A>G
  hgvsp: ENSP00000407356.1:p.Arg100Gly
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.103A>G
  hgvsp: ENSP00000411737.1:p.Arg35Gly
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.304A>G
  hgvsp: ENSP00000285279.5:p.Arg102Gly
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.103A>G
  hgvsp: ENSP00000416530.1:p.Arg35Gly
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.103A>G
  hgvsp: ENSP00000389601.1:p.Arg35Gly
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6247
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17745
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14543
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg102Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

7-55560002-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560002
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560002
    reference: chr 7
allele count: 1
allele frequency: 9.717417499125432e-6
allele num: 102908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.292A>T
  hgvsp: ENSP00000446442.1:p.Thr98Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.112A>T
  hgvsp: ENSP00000411447.1:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.295A>T
  hgvsp: ENSP00000407356.1:p.Thr99Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.301A>T
  hgvsp: ENSP00000285279.5:p.Thr101Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.274A>T
  hgvsp: ENSP00000415230.1:p.Thr92Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.100A>T
  hgvsp: ENSP00000416530.1:p.Thr34Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.250A>T
  hgvsp: ENSP00000393210.1:p.Thr84Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.100A>T
  hgvsp: ENSP00000411737.1:p.Thr34Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.100A>T
  hgvsp: ENSP00000395533.1:p.Thr34Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.100A>T
  hgvsp: ENSP00000407579.1:p.Thr34Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.537A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.390A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.100A>T
  hgvsp: ENSP00000389601.1:p.Thr34Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.100A>T
  hgvsp: ENSP00000413948.1:p.Thr34Ser
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17912
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5972
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr101Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

7-55560003-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560003
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560003
    reference: chr 7
allele count: 1
allele frequency: 9.727058731980624e-6
allele num: 102806
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.99C>T
  hgvsp: ENST00000428097.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.99C>T
  hgvsp: ENST00000428648.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.111C>T
  hgvsp: ENST00000454227.1:c.111C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.99C>T
  hgvsp: ENST00000417399.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.273C>T
  hgvsp: ENST00000433959.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.300C>T
  hgvsp: ENST00000285279.5:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.99C>T
  hgvsp: ENST00000453256.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.536C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.249C>T
  hgvsp: ENST00000418904.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.99C>T
  hgvsp: ENST00000455023.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.294C>T
  hgvsp: ENST00000427700.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.291C>T
  hgvsp: ENST00000545390.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.99C>T
  hgvsp: ENST00000414113.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.389C>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr100Tyr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

7-55560007-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560007
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560007
    reference: chr 7
allele count: 1
allele frequency: 9.752101577890035e-6
allele num: 102542
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.95C>T
  hgvsp: ENSP00000411737.1:p.Ser32Phe
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.532C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.290C>T
  hgvsp: ENSP00000407356.1:p.Ser97Phe
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.95C>T
  hgvsp: ENSP00000416530.1:p.Ser32Phe
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.95C>T
  hgvsp: ENSP00000395533.1:p.Ser32Phe
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.296C>T
  hgvsp: ENSP00000285279.5:p.Ser99Phe
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.287C>T
  hgvsp: ENSP00000446442.1:p.Ser96Phe
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.107C>T
  hgvsp: ENSP00000411447.1:p.Ser36Phe
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.245C>T
  hgvsp: ENSP00000393210.1:p.Ser82Phe
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.385C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.269C>T
  hgvsp: ENSP00000415230.1:p.Ser90Phe
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.95C>T
  hgvsp: ENSP00000407579.1:p.Ser32Phe
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.95C>T
  hgvsp: ENSP00000413948.1:p.Ser32Phe
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.95C>T
  hgvsp: ENSP00000389601.1:p.Ser32Phe
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17591
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5854
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8438
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser99Phe
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

7-55560012-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560012
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560012
    reference: chr 7
allele count: 3
allele frequency: 2.940196405119862e-5
allele num: 102034
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.102T>C
  hgvsp: ENST00000454227.1:c.102T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.90T>C
  hgvsp: ENST00000417399.1:c.90T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.291T>C
  hgvsp: ENST00000285279.5:c.291T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.90T>C
  hgvsp: ENST00000455023.1:c.90T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.527T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.90T>C
  hgvsp: ENST00000428648.1:c.90T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.380T>C
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.90T>C
  hgvsp: ENST00000428097.1:c.90T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.240T>C
  hgvsp: ENST00000418904.1:c.240T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.90T>C
  hgvsp: ENST00000414113.1:c.90T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.264T>C
  hgvsp: ENST00000433959.1:c.264T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.285T>C
  hgvsp: ENST00000427700.1:c.285T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.90T>C
  hgvsp: ENST00000453256.1:c.90T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.282T>C
  hgvsp: ENST00000545390.1:c.282T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9269
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn97Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-55560013-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560013
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560013
    reference: chr 7
allele count: 1
allele frequency: 9.809499519334523e-6
allele num: 101942
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.101A>G
  hgvsp: ENSP00000411447.1:p.Asn34Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.89A>G
  hgvsp: ENSP00000395533.1:p.Asn30Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.239A>G
  hgvsp: ENSP00000393210.1:p.Asn80Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.281A>G
  hgvsp: ENSP00000446442.1:p.Asn94Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.89A>G
  hgvsp: ENSP00000389601.1:p.Asn30Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.526A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.89A>G
  hgvsp: ENSP00000407579.1:p.Asn30Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.263A>G
  hgvsp: ENSP00000415230.1:p.Asn88Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.89A>G
  hgvsp: ENSP00000413948.1:p.Asn30Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.89A>G
  hgvsp: ENSP00000416530.1:p.Asn30Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.89A>G
  hgvsp: ENSP00000411737.1:p.Asn30Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.290A>G
  hgvsp: ENSP00000285279.5:p.Asn97Ser
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.379A>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.284A>G
  hgvsp: ENSP00000407356.1:p.Asn95Ser
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn97Ser
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

7-55560020-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560020
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560020
    reference: chr 7
allele count: 2
allele frequency: 1.984363217843394e-5
allele num: 100788
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.82G>A
  hgvsp: ENSP00000389601.1:p.Ala28Thr
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.256G>A
  hgvsp: ENSP00000415230.1:p.Ala86Thr
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.277G>A
  hgvsp: ENSP00000407356.1:p.Ala93Thr
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.82G>A
  hgvsp: ENSP00000416530.1:p.Ala28Thr
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.82G>A
  hgvsp: ENSP00000407579.1:p.Ala28Thr
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.82G>A
  hgvsp: ENSP00000413948.1:p.Ala28Thr
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.82G>A
  hgvsp: ENSP00000411737.1:p.Ala28Thr
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.82G>A
  hgvsp: ENSP00000395533.1:p.Ala28Thr
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.232G>A
  hgvsp: ENSP00000393210.1:p.Ala78Thr
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.283G>A
  hgvsp: ENSP00000285279.5:p.Ala95Thr
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.94G>A
  hgvsp: ENSP00000411447.1:p.Ala32Thr
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.519G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.274G>A
  hgvsp: ENSP00000446442.1:p.Ala92Thr
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.372G>A
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14249
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala95Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

7-55560027-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560027
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560027
    reference: chr 7
allele count: 1
allele frequency: 1.009795011612643e-5
allele num: 99030
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.75G>A
  hgvsp: ENST00000428648.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.75G>A
  hgvsp: ENST00000453256.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.75G>A
  hgvsp: ENST00000414113.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.75G>A
  hgvsp: ENST00000417399.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.225G>A
  hgvsp: ENST00000418904.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.365G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.270G>A
  hgvsp: ENST00000427700.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.276G>A
  hgvsp: ENST00000285279.5:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.75G>A
  hgvsp: ENST00000428097.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.87G>A
  hgvsp: ENST00000454227.1:c.87G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.512G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.267G>A
  hgvsp: ENST00000545390.1:c.267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.249G>A
  hgvsp: ENST00000433959.1:c.249G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.75G>A
  hgvsp: ENST00000455023.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11132
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu92Glu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP

7-55560028-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560028
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560028
    reference: chr 7
allele count: 1
allele frequency: 1.012617210442109e-5
allele num: 98754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.74A>T
  hgvsp: ENSP00000389601.1:p.Glu25Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.511A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.74A>T
  hgvsp: ENSP00000411737.1:p.Glu25Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.86A>T
  hgvsp: ENSP00000411447.1:p.Glu29Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.364A>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.74A>T
  hgvsp: ENSP00000416530.1:p.Glu25Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.266A>T
  hgvsp: ENSP00000446442.1:p.Glu89Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.224A>T
  hgvsp: ENSP00000393210.1:p.Glu75Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.74A>T
  hgvsp: ENSP00000395533.1:p.Glu25Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.275A>T
  hgvsp: ENSP00000285279.5:p.Glu92Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.269A>T
  hgvsp: ENSP00000407356.1:p.Glu90Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.74A>T
  hgvsp: ENSP00000413948.1:p.Glu25Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.248A>T
  hgvsp: ENSP00000415230.1:p.Glu83Val
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.74A>T
  hgvsp: ENSP00000407579.1:p.Glu25Val
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9604
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9766
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu92Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/7-55560029-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560029
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560029
    reference: chr 7
allele count: 8
allele frequency: 8.246232502525409e-5
allele num: 97014
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.265G>T
  hgvsp: ENSP00000446442.1:p.Glu89Ter
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.274G>T
  hgvsp: ENSP00000285279.5:p.Glu92Ter
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.73G>T
  hgvsp: ENSP00000416530.1:p.Glu25Ter
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.247G>T
  hgvsp: ENSP00000415230.1:p.Glu83Ter
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.223G>T
  hgvsp: ENSP00000393210.1:p.Glu75Ter
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.73G>T
  hgvsp: ENSP00000411737.1:p.Glu25Ter
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.73G>T
  hgvsp: ENSP00000395533.1:p.Glu25Ter
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.85G>T
  hgvsp: ENSP00000411447.1:p.Glu29Ter
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.73G>T
  hgvsp: ENSP00000413948.1:p.Glu25Ter
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.73G>T
  hgvsp: ENSP00000389601.1:p.Glu25Ter
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.268G>T
  hgvsp: ENSP00000407356.1:p.Glu90Ter
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.510G>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.73G>T
  hgvsp: ENSP00000407579.1:p.Glu25Ter
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.363G>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6824
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10188
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19094
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10499
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9974
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Glu92Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

7-55560030-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560030
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560030
    reference: chr 7
allele count: 1
allele frequency: 1.025683104947895e-5
allele num: 97496
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.84C>T
  hgvsp: ENST00000454227.1:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.362C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.72C>T
  hgvsp: ENST00000428648.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.72C>T
  hgvsp: ENST00000414113.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.273C>T
  hgvsp: ENST00000285279.5:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.72C>T
  hgvsp: ENST00000453256.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.72C>T
  hgvsp: ENST00000455023.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.246C>T
  hgvsp: ENST00000433959.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.264C>T
  hgvsp: ENST00000545390.1:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.222C>T
  hgvsp: ENST00000418904.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.72C>T
  hgvsp: ENST00000417399.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.509C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.267C>T
  hgvsp: ENST00000427700.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.72C>T
  hgvsp: ENST00000428097.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile91Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

7-55560030-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560030
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560030
    reference: chr 7
allele count: 2
allele frequency: 2.051366209895791e-5
allele num: 97496
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.72C>G
  hgvsp: ENSP00000389601.1:p.Ile24Met
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.264C>G
  hgvsp: ENSP00000446442.1:p.Ile88Met
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.509C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.72C>G
  hgvsp: ENSP00000395533.1:p.Ile24Met
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.72C>G
  hgvsp: ENSP00000411737.1:p.Ile24Met
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.72C>G
  hgvsp: ENSP00000413948.1:p.Ile24Met
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.362C>G
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.246C>G
  hgvsp: ENSP00000415230.1:p.Ile82Met
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.273C>G
  hgvsp: ENSP00000285279.5:p.Ile91Met
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.84C>G
  hgvsp: ENSP00000411447.1:p.Ile28Met
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.267C>G
  hgvsp: ENSP00000407356.1:p.Ile89Met
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.72C>G
  hgvsp: ENSP00000416530.1:p.Ile24Met
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.222C>G
  hgvsp: ENSP00000393210.1:p.Ile74Met
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.72C>G
  hgvsp: ENSP00000407579.1:p.Ile24Met
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19082
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile91Met
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

7-55560036-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560036
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560036
    reference: chr 7
allele count: 1
allele frequency: 1.051812272545596e-5
allele num: 95074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.503G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.216G>A
  hgvsp: ENST00000418904.1:c.216G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.240G>A
  hgvsp: ENST00000433959.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.258G>A
  hgvsp: ENST00000545390.1:c.258G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.356G>A
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.261G>A
  hgvsp: ENST00000427700.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.66G>A
  hgvsp: ENST00000453256.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.66G>A
  hgvsp: ENST00000455023.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.66G>A
  hgvsp: ENST00000417399.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.78G>A
  hgvsp: ENST00000454227.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.66G>A
  hgvsp: ENST00000414113.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.66G>A
  hgvsp: ENST00000428648.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.267G>A
  hgvsp: ENST00000285279.5:c.267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.66G>A
  hgvsp: ENST00000428097.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10667
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro89Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS

7-55560037-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55560037
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 55560037
    reference: chr 7
allele count: 4
allele frequency: 4.206098843322818e-5
allele num: 95100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000416530
  ensembl transcript: ENST00000414113
  gene symbol: VOPP1
  hgvsc: ENST00000414113.1:c.65C>T
  hgvsp: ENSP00000416530.1:p.Pro22Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000413948
  ensembl transcript: ENST00000428648
  gene symbol: VOPP1
  hgvsc: ENST00000428648.1:c.65C>T
  hgvsp: ENSP00000413948.1:p.Pro22Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000389601
  ensembl transcript: ENST00000428097
  gene symbol: VOPP1
  hgvsc: ENST00000428097.1:c.65C>T
  hgvsp: ENSP00000389601.1:p.Pro22Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411447
  ensembl transcript: ENST00000454227
  gene symbol: VOPP1
  hgvsc: ENST00000454227.1:c.77C>T
  hgvsp: ENSP00000411447.1:p.Pro26Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000285279
  ensembl transcript: ENST00000285279
  gene symbol: VOPP1
  hgvsc: ENST00000285279.5:c.266C>T
  hgvsp: ENSP00000285279.5:p.Pro89Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000415230
  ensembl transcript: ENST00000433959
  gene symbol: VOPP1
  hgvsc: ENST00000433959.1:c.239C>T
  hgvsp: ENSP00000415230.1:p.Pro80Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000393210
  ensembl transcript: ENST00000418904
  gene symbol: VOPP1
  hgvsc: ENST00000418904.1:c.215C>T
  hgvsp: ENSP00000393210.1:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407579
  ensembl transcript: ENST00000455023
  gene symbol: VOPP1
  hgvsc: ENST00000455023.1:c.65C>T
  hgvsp: ENSP00000407579.1:p.Pro22Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000462326
  gene symbol: VOPP1
  hgvsc: ENST00000462326.1:n.355C>T
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000407356
  ensembl transcript: ENST00000427700
  gene symbol: VOPP1
  hgvsc: ENST00000427700.1:c.260C>T
  hgvsp: ENSP00000407356.1:p.Pro87Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000411737
  ensembl transcript: ENST00000417399
  gene symbol: VOPP1
  hgvsc: ENST00000417399.1:c.65C>T
  hgvsp: ENSP00000411737.1:p.Pro22Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000395533
  ensembl transcript: ENST00000453256
  gene symbol: VOPP1
  hgvsc: ENST00000453256.1:c.65C>T
  hgvsp: ENSP00000395533.1:p.Pro22Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000408161
  ensembl transcript: ENST00000452832
  gene symbol: VOPP1
  hgvsc: ENST00000452832.1:c.65C>T
  hgvsp: ENST00000452832.1:c.65C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000154978
  ensembl protein: ENSP00000446442
  ensembl transcript: ENST00000545390
  gene symbol: VOPP1
  hgvsc: ENST00000545390.1:c.257C>T
  hgvsp: ENSP00000446442.1:p.Pro86Leu
  variant of: http://identifiers.org/hgnc/34518
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000154978
  ensembl transcript: ENST00000481197
  gene symbol: VOPP1
  hgvsc: ENST00000481197.1:n.502C>T
  variant of: http://identifiers.org/hgnc/34518
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10528
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5824
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18822
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10923
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro89Leu
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 16
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 759
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2197
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2185
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42354
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6667
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.105107902499612e-5
allele num: 64410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.158e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-2

MQ
type: SiteQuality
SIO_000300: 4.199e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.97e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.17e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

DP
type: SiteQuality
SIO_000300: 1.376617e6

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3353
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42586
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2217
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6692
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2536
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.087429317094389e-4
allele num: 9196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.34e-1

FS
type: SiteQuality
SIO_000300: 3.995e0

DP
type: SiteQuality
SIO_000300: 1.381168e6

QD
type: SiteQuality
SIO_000300: 1.829e1

VQSLOD
type: SiteQuality
SIO_000300: -1.884e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

MQ
type: SiteQuality
SIO_000300: 4.358e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.136e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeDepth
all individuals: 7
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 42187
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1444
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42919
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2616
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6832
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2284
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65220
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.142506142506142e-5
allele num: 16280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.09e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.396154e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.68e-1

QD
type: SiteQuality
SIO_000300: 9.16e0

VQSLOD
type: SiteQuality
SIO_000300: -1.805e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 4.605e1

GenotypeDepth
all individuals: 32
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 172
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 37
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1360
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
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variant carriers: 0

GenotypeQuality
all individuals: 43049
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 545
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variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2301
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6861
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 9.75e1
variant carriers: 8

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.347593582887701e-4
allele num: 9350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.636667252592723e-4
allele num: 11378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.57e-1

MQ
type: SiteQuality
SIO_000300: 4.672e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.15e-1

FS
type: SiteQuality
SIO_000300: 5.590000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.488e0

DP
type: SiteQuality
SIO_000300: 1.398338e6

QD
type: SiteQuality
SIO_000300: 1.339e1

GenotypeDepth
all individuals: 75
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6868
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2641
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
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variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2296
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 43022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
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variant carriers: 0

GenotypeQuality
all individuals: 1564
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.060069157562961e-5
allele num: 65358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9362
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.130456105934282e-5
allele num: 16312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.169317118802619e-3
allele num: 8552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.689e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.95e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.26e0

DP
type: SiteQuality
SIO_000300: 1.401026e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.565e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 1.072e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.51e-1

GenotypeDepth
all individuals: 19
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 503
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variant carriers: 0

GenotypeDepth
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6880
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2663
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1582
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
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variant carriers: 0

GenotypeQuality
all individuals: 42716
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528631263566603e-5
allele num: 65418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.507131166705635e-4
allele num: 8554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.138e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.47e-1

MQ
type: SiteQuality
SIO_000300: 4.828e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.75e-1

FS
type: SiteQuality
SIO_000300: 1.8149e1

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

QD
type: SiteQuality
SIO_000300: 1.227e1

DP
type: SiteQuality
SIO_000300: 1.402395e6

GenotypeDepth
all individuals: 5
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1602
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1141
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43056
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.529051987767584e-4
allele num: 6540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65550
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.11545988258317e-5
allele num: 16352
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 3.0e-4

ReadPosRankSum
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SIO_000300: 1.05e0

FS
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SIO_000300: 3.028e0

VQSLOD
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DP
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BaseQRankSum
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SIO_000300: -1.804e0

MQRankSum
type: SiteQuality
SIO_000300: -6.6e-2

MQ
type: SiteQuality
SIO_000300: 4.857e1

QD
type: SiteQuality
SIO_000300: 3.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2359
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.895e1

DP
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SIO_000300: 1.415617e6

VQSLOD
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BaseQRankSum
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SIO_000300: -1.648e0

InbreedingCoeff
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SIO_000300: 3.4e-3

QD
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SIO_000300: 1.103e1

ReadPosRankSum
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SIO_000300: -2.64e-1

FS
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SIO_000300: 1.654e0

MQRankSum
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SIO_000300: 1.5e0

ClippingRankSum
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SIO_000300: 0.0e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 570
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GenotypeQuality
all individuals: 122
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.103598956120653e-5
allele num: 65908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.654e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQ
type: SiteQuality
SIO_000300: 4.895e1

BaseQRankSum
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SIO_000300: -1.648e0

VQSLOD
type: SiteQuality
SIO_000300: -1.793e0

ClippingRankSum
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SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.103e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

DP
type: SiteQuality
SIO_000300: 1.415617e6

GenotypeDepth
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bin: 4.75e1
variant carriers: 3491

GenotypeDepth
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variant carriers: 3123

GenotypeDepth
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bin: 6.75e1
variant carriers: 2200

GenotypeDepth
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variant carriers: 1723

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 11

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 26

GenotypeQuality
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variant carriers: 211

GenotypeQuality
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variant carriers: 14

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 31

GenotypeQuality
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bin: 5.75e1
variant carriers: 65

GenotypeQuality
all individuals: 624
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variant carriers: 183

GenotypeQuality
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variant carriers: 148

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 32663

GenotypeQuality
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variant carriers: 94

GenotypeQuality
all individuals: 20
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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variant carriers: 129

GenotypeQuality
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bin: 5.25e1
variant carriers: 87

GenotypeQuality
all individuals: 402
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GenotypeQuality
all individuals: 109
bin: 4.75e1
variant carriers: 62

GenotypeQuality
all individuals: 906
bin: 7.25e1
variant carriers: 101

GenotypeQuality
all individuals: 82
bin: 2.75e1
variant carriers: 15

African
type: Population
allele count: 1857
allele frequency: 1.929952192891291e-1
allele num: 9622
num of homozygotes: 187

East Asian
type: Population
allele count: 4458
allele frequency: 5.184926727145848e-1
allele num: 8598
num of homozygotes: 1151

Latino
type: Population
allele count: 7031
allele frequency: 6.107539958304378e-1
allele num: 11512
num of homozygotes: 2198

European (Finnish)
type: Population
allele count: 2424
allele frequency: 3.67495451788963e-1
allele num: 6596
num of homozygotes: 439

South Asian
type: Population
allele count: 5753
allele frequency: 3.488357991753577e-1
allele num: 16492
num of homozygotes: 975

European (Non-Finnish)
type: Population
allele count: 20211
allele frequency: 3.053021148036254e-1
allele num: 66200
num of homozygotes: 3102

Other
type: Population
allele count: 316
allele frequency: 3.542600896860987e-1
allele num: 892
num of homozygotes: 62

MQ
type: SiteQuality
SIO_000300: 4.884e1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

BaseQRankSum
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SIO_000300: 8.05e-1

QD
type: SiteQuality
SIO_000300: 1.614e1

DP
type: SiteQuality
SIO_000300: 2.646843e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.59e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

GenotypeDepth
all individuals: 68
bin: 7.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 28
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
all individuals: 237
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GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 35694
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.043208943949237e-5
allele num: 66190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.204e0

VQSLOD
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SIO_000300: -1.286e0

MQ
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SIO_000300: 5.096e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

FS
type: SiteQuality
SIO_000300: 3.243e0

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-1

QD
type: SiteQuality
SIO_000300: 1.091e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

DP
type: SiteQuality
SIO_000300: 1.693547e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.041232819658476e-4
allele num: 9604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.06426564341179e-5
allele num: 66194
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e-1

MQRankSum
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FS
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SIO_000300: 0.0e0

QD
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MQ
type: SiteQuality
SIO_000300: 5.124e1

BaseQRankSum
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SIO_000300: 1.22e0

VQSLOD
type: SiteQuality
SIO_000300: -4.902e-1

DP
type: SiteQuality
SIO_000300: 1.692947e6

GenotypeDepth
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variant carriers: 2

GenotypeDepth
all individuals: 32
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4036
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variant carriers: 13

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.804504295333178e-4
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.057785299806576e-4
allele num: 66176
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.257e1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.74e0

ClippingRankSum
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SIO_000300: -2.12e-1

DP
type: SiteQuality
SIO_000300: 1.69237e6

VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 8.677542519958348e-5
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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East Asian
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South Asian
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European (Finnish)
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ReadPosRankSum
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MQ
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InbreedingCoeff
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DP
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MQRankSum
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FS
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VQSLOD
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BaseQRankSum
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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Other
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66138
num of homozygotes: 0

African
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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QD
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.535970244035199e-5
allele num: 66138
num of homozygotes: 0

Other
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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DP
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FS
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MQRankSum
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MQ
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BaseQRankSum
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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allele num: 8610
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Latino
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African
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European (Non-Finnish)
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allele num: 66118
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South Asian
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European (Finnish)
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MQ
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ReadPosRankSum
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FS
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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QD
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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DP
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InbreedingCoeff
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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MQRankSum
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QD
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Other
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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DP
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VQSLOD
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MQ
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InbreedingCoeff
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MQRankSum
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QD
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BaseQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 5
allele frequency: 7.565670015736593e-5
allele num: 66088
num of homozygotes: 0

South Asian
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allele num: 16490
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Other
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African
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Latino
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allele frequency: 0.0e0
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QD
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ReadPosRankSum
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MQ
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FS
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InbreedingCoeff
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DP
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ClippingRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 4
allele frequency: 6.057302077654612e-5
allele num: 66036
num of homozygotes: 0

BaseQRankSum
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InbreedingCoeff
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FS
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MQRankSum
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DP
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MQ
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QD
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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African
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South Asian
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Latino
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MQ
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MQRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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QD
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

South Asian
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allele count: 0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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DP
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SIO_000300: 1.673663e6

InbreedingCoeff
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BaseQRankSum
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FS
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MQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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QD
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VQSLOD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
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European (Non-Finnish)
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Latino
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South Asian
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European (Finnish)
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African
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InbreedingCoeff
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MQ
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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DP
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MQRankSum
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FS
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ClippingRankSum
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 65942
num of homozygotes: 0

East Asian
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African
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Other
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European (Finnish)
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South Asian
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Latino
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MQRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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FS
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QD
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DP
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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East Asian
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African
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European (Finnish)
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Latino
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InbreedingCoeff
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DP
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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QD
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MQ
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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Latino
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European (Finnish)
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African
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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SIO_000300: 5.162e1

BaseQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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East Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 65816
num of homozygotes: 0

BaseQRankSum
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DP
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MQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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FS
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QD
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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European (Finnish)
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European (Non-Finnish)
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allele num: 65810
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
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ReadPosRankSum
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MQRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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MQ
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ClippingRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
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allele frequency: 6.096817461285209e-5
allele num: 16402
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African
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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DP
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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QD
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FS
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
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Latino
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allele frequency: 1.748863238894718e-4
allele num: 11436
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.606722276741904e-4
allele num: 65216
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South Asian
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allele frequency: 1.467530879295585e-3
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East Asian
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Other
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MQ
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MQRankSum
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FS
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ClippingRankSum
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DP
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QD
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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Other
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African
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European (Finnish)
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South Asian
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Latino
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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FS
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DP
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MQ
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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East Asian
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VQSLOD
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DP
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ClippingRankSum
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FS
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MQRankSum
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MQ
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: 5.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 7.4e0

GenotypeDepth
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2418
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1156
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9449
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3086
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3611
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2006
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3515
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4097
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1058
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4064
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20790
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.640527593674126e-5
allele num: 60956
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12280
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

QD
type: SiteQuality
SIO_000300: 1.178e1

MQ
type: SiteQuality
SIO_000300: 5.482e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-2

DP
type: SiteQuality
SIO_000300: 1.167238e6

GenotypeDepth
all individuals: 138
bin: 4.75e1
variant carriers: 9

GenotypeDepth
all individuals: 10
bin: 9.25e1
variant carriers: 2

GenotypeDepth
all individuals: 48
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 347
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 20790
bin: 6.25e1
variant carriers: 14

GenotypeQuality
all individuals: 188
bin: 9.25e1
variant carriers: 28

GenotypeQuality
all individuals: 4097
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 3086
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 9449
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2418
bin: 5.25e1
variant carriers: 11

GenotypeQuality
all individuals: 617
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 3515
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2006
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 25

GenotypeQuality
all individuals: 500
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 329
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 1156
bin: 7.25e1
variant carriers: 13

GenotypeQuality
all individuals: 1058
bin: 7.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1962
bin: 9.75e1
variant carriers: 1256

GenotypeQuality
all individuals: 606
bin: 5.75e1
variant carriers: 8

GenotypeQuality
all individuals: 3611
bin: 3.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4064
bin: 6.75e1
variant carriers: 9

GenotypeQuality
all individuals: 469
bin: 8.25e1
variant carriers: 16

European (Non-Finnish)
type: Population
allele count: 997
allele frequency: 1.635606010893103e-2
allele num: 60956
num of homozygotes: 6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 30
allele frequency: 5.647590361445783e-3
allele num: 5312
num of homozygotes: 2

African
type: Population
allele count: 86
allele frequency: 1.003032423606252e-2
allele num: 8574
num of homozygotes: 0

Other
type: Population
allele count: 11
allele frequency: 1.451187335092348e-2
allele num: 758
num of homozygotes: 0

South Asian
type: Population
allele count: 78
allele frequency: 6.351791530944626e-3
allele num: 12280
num of homozygotes: 0

Latino
type: Population
allele count: 129
allele frequency: 1.25780031201248e-2
allele num: 10256
num of homozygotes: 2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-2

DP
type: SiteQuality
SIO_000300: 1.167238e6

MQ
type: SiteQuality
SIO_000300: 5.482e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

FS
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 4.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

QD
type: SiteQuality
SIO_000300: 1.178e1

GenotypeDepth
all individuals: 48
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2418
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1058
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 500
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variant carriers: 0

GenotypeQuality
all individuals: 1156
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4097
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4064
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3611
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20790
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3515
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9449
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2006
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3086
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1962
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.132685871776363e-4
allele num: 60956
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.665267086540705e-4
allele num: 8574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12280
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.850234009360375e-4
allele num: 10256
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.178e1

MQ
type: SiteQuality
SIO_000300: 5.482e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

FS
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 4.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

DP
type: SiteQuality
SIO_000300: 1.167238e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

GenotypeDepth
all individuals: 131
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28
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variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1053
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
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variant carriers: 0

GenotypeQuality
all individuals: 9909
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3493
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variant carriers: 0

GenotypeQuality
all individuals: 3730
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variant carriers: 0

GenotypeQuality
all individuals: 21442
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
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variant carriers: 0

GenotypeQuality
all individuals: 580
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variant carriers: 0

GenotypeQuality
all individuals: 477
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variant carriers: 0

GenotypeQuality
all individuals: 163
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variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4131
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4225
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
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variant carriers: 0

GenotypeQuality
all individuals: 3250
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2276
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.636446946389998e-5
allele num: 61108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5308
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.777082518576456e-5
allele num: 10228
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12492
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

DP
type: SiteQuality
SIO_000300: 1.163284e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.097e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

QD
type: SiteQuality
SIO_000300: 7.72e0

VQSLOD
type: SiteQuality
SIO_000300: 8.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.505e1

FS
type: SiteQuality
SIO_000300: 1.0217e1

MQRankSum
type: SiteQuality
SIO_000300: -3.28e-1

GenotypeDepth
all individuals: 214
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 131
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3730
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3250
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2276
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4225
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9909
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4131
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21442
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3493
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1053
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.636446946389998e-5
allele num: 61108
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12492
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0217e1

MQRankSum
type: SiteQuality
SIO_000300: -3.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.097e0

DP
type: SiteQuality
SIO_000300: 1.163284e6

QD
type: SiteQuality
SIO_000300: 7.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQ
type: SiteQuality
SIO_000300: 5.505e1

VQSLOD
type: SiteQuality
SIO_000300: 8.98e-1

GenotypeDepth
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
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variant carriers: 0

GenotypeDepth
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
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GenotypeQuality
all individuals: 3687
bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4196
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 8.25e1
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GenotypeQuality
all individuals: 10018
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4147
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 9.25e1
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GenotypeQuality
all individuals: 1992
bin: 5.25e1
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GenotypeQuality
all individuals: 1165
bin: 7.25e1
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GenotypeQuality
all individuals: 278
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 521
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.265839320705422e-5
allele num: 61240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.728e1

FS
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 1.165103e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

QD
type: SiteQuality
SIO_000300: 7.56e0

VQSLOD
type: SiteQuality
SIO_000300: -1.351e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeDepth
all individuals: 212
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
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variant carriers: 0

GenotypeDepth
all individuals: 45
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variant carriers: 0

GenotypeQuality
all individuals: 660
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GenotypeQuality
all individuals: 469
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GenotypeQuality
all individuals: 134
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GenotypeQuality
all individuals: 4180
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
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GenotypeQuality
all individuals: 156
bin: 9.25e1
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GenotypeQuality
all individuals: 3256
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1936
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1895
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
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GenotypeQuality
all individuals: 3616
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4102
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 22717
bin: 6.25e1
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GenotypeQuality
all individuals: 3066
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variant carriers: 0

GenotypeQuality
all individuals: 1143
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variant carriers: 0

GenotypeQuality
all individuals: 989
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GenotypeQuality
all individuals: 693
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.636072118058964e-5
allele num: 61122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5316
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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DP
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InbreedingCoeff
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.272893892779996e-5
allele num: 61108
num of homozygotes: 0

South Asian
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Other
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East Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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MQ
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 61124
num of homozygotes: 0

African
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Latino
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Other
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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FS
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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MQ
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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Other
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African
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South Asian
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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FS
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MQRankSum
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BaseQRankSum
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QD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 60704
num of homozygotes: 0

Latino
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African
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South Asian
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East Asian
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European (Finnish)
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Other
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MQ
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BaseQRankSum
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QD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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DP
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FS
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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Other
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South Asian
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European (Non-Finnish)
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Latino
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FS
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MQRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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East Asian
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FS
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DP
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MQ
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BaseQRankSum
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MQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.263264274886306e-4
allele num: 7916
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60334
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13150
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5180
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.586e0

FS
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SIO_000300: 1.003e1

BaseQRankSum
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SIO_000300: -1.623e0

MQRankSum
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SIO_000300: 4.43e-1

ClippingRankSum
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SIO_000300: -5.39e-1

DP
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SIO_000300: 1.197833e6

ReadPosRankSum
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SIO_000300: 3.21e-1

MQ
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SIO_000300: 5.392e1

InbreedingCoeff
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SIO_000300: -1.4e-3

QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.65892501658925e-5
allele num: 60280
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.998401278976818e-4
allele num: 10008
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: -8.06e-1

QD
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MQRankSum
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FS
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VQSLOD
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MQ
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BaseQRankSum
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SIO_000300: -1.319e0

ClippingRankSum
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SIO_000300: 5.51e-1

DP
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SIO_000300: 1.195178e6

InbreedingCoeff
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SIO_000300: -1.0e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7882
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60116
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.332e0

ClippingRankSum
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SIO_000300: 2.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

MQRankSum
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DP
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SIO_000300: 1.187509e6

InbreedingCoeff
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SIO_000300: -9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.608e1

FS
type: SiteQuality
SIO_000300: 2.1534e1

QD
type: SiteQuality
SIO_000300: 1.278e1

BaseQRankSum
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SIO_000300: -2.681e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7834
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.672464543751672e-5
allele num: 59792
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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SIO_000300: -1.053e0

FS
type: SiteQuality
SIO_000300: 2.747e0

MQ
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SIO_000300: 5.534e1

ClippingRankSum
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SIO_000300: 5.55e-1

ReadPosRankSum
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BaseQRankSum
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DP
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MQRankSum
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SIO_000300: -1.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

QD
type: SiteQuality
SIO_000300: 1.058e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59616
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 9
allele frequency: 1.093294460641399e-3
allele num: 8232
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Other
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
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FS
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MQRankSum
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VQSLOD
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QD
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DP
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
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European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

Latino
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African
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South Asian
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European (Finnish)
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BaseQRankSum
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ClippingRankSum
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FS
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QD
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MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 5.110732538330494e-5
allele num: 58700
num of homozygotes: 0

Latino
type: Population
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European (Finnish)
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East Asian
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Other
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African
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MQRankSum
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QD
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ReadPosRankSum
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DP
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VQSLOD
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FS
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ClippingRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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MQRankSum
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MQ
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VQSLOD
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DP
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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African
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Other
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European (Non-Finnish)
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Latino
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ReadPosRankSum
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MQRankSum
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QD
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FS
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ClippingRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Other
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European (Non-Finnish)
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African
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South Asian
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Latino
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InbreedingCoeff
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FS
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DP
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BaseQRankSum
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MQ
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QD
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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East Asian
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South Asian
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QD
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DP
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InbreedingCoeff
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FS
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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South Asian
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East Asian
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African
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FS
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MQ
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ReadPosRankSum
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MQRankSum
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QD
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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ReadPosRankSum
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MQ
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SIO_000300: 3.581e1

QD
type: SiteQuality
SIO_000300: 4.61e0

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

DP
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SIO_000300: 1.067059e6

FS
type: SiteQuality
SIO_000300: 8.96e-1

VQSLOD
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ClippingRankSum
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SIO_000300: 6.2e-2

BaseQRankSum
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SIO_000300: -1.837e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9150
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4754
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7186
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.783039726125098e-5
allele num: 56084
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

MQ
type: SiteQuality
SIO_000300: 4.994e1

ReadPosRankSum
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SIO_000300: 1.12e0

MQRankSum
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SIO_000300: -1.97e-1

BaseQRankSum
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QD
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VQSLOD
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FS
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SIO_000300: 0.0e0

ClippingRankSum
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DP
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SIO_000300: 1.021183e6

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4734
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.787565693039219e-5
allele num: 55942
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13464
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9084
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.48e0

DP
type: SiteQuality
SIO_000300: 1.016028e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

ClippingRankSum
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SIO_000300: -2.71e-1

MQRankSum
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VQSLOD
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.065e1

BaseQRankSum
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SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.81996869653842e-5
allele num: 54946
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.509922346850733e-3
allele num: 4636
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQ
type: SiteQuality
SIO_000300: 4.306e1

BaseQRankSum
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SIO_000300: 5.55e-1

QD
type: SiteQuality
SIO_000300: 1.115e1

InbreedingCoeff
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SIO_000300: -4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.92e-1

VQSLOD
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-1

DP
type: SiteQuality
SIO_000300: 1.004995e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.421666192777936e-4
allele num: 7034
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 55182
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13414
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: 3.28e-1

FS
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 4.211e1

DP
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ReadPosRankSum
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QD
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 1
allele frequency: 7.45489786789921e-5
allele num: 13414
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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Latino
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allele count: 0
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allele num: 8980
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.329787234042553e-4
allele num: 7520
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
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BaseQRankSum
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QD
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MQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.862058692089975e-5
allele num: 53704
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Other
type: Population
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African
type: Population
allele count: 0
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Latino
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South Asian
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ClippingRankSum
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QD
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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FS
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1008
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 125
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1650
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18804
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 2.5e0
variant carriers: 0