5-73181885-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181885
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181885
    reference: chr 5
allele count: 3
allele frequency: 2.48809859505366e-5
allele num: 120574
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2327A>G
  hgvsp: ENSP00000296799.4:p.Tyr776Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3266A>G
  hgvsp: ENSP00000441436.1:p.Tyr1089Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3266A>G
  hgvsp: ENSP00000296794.6:p.Tyr1089Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3266A>G
  hgvsp: ENSP00000287898.5:p.Tyr1089Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3266A>G
  hgvsp: ENSP00000412175.2:p.Tyr1089Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.445A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3266A>G
  hgvsp: ENSP00000441913.1:p.Tyr1089Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3266A>G
  hgvsp: ENSP00000411459.1:p.Tyr1089Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.158A>G
  hgvsp: ENSP00000421081.1:p.Tyr53Cys
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35596
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2493
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Tyr1089Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

5-73181886-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181886
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181886
    reference: chr 5
allele count: 4
allele frequency: 3.317794993447355e-5
allele num: 120562
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3267T>C
  hgvsp: ENST00000545377.1:c.3267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3267T>C
  hgvsp: ENST00000513042.2:c.3267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3267T>C
  hgvsp: ENST00000437974.1:c.3267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.159T>C
  hgvsp: ENST00000512883.1:c.159T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2328T>C
  hgvsp: ENST00000296799.4:c.2328T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3267T>C
  hgvsp: ENST00000426542.2:c.3267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.446T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3267T>C
  hgvsp: ENST00000287898.5:c.3267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3267T>C
  hgvsp: ENST00000296794.6:c.3267T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16777
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3290
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr1089Tyr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

5-73181891-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181891
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181891
    reference: chr 5
allele count: 1
allele frequency: 8.295726041943191e-6
allele num: 120544
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3272G>C
  hgvsp: ENSP00000412175.2:p.Gly1091Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.451G>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.164G>C
  hgvsp: ENSP00000421081.1:p.Gly55Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3272G>C
  hgvsp: ENSP00000411459.1:p.Gly1091Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3272G>C
  hgvsp: ENSP00000441436.1:p.Gly1091Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3272G>C
  hgvsp: ENSP00000287898.5:p.Gly1091Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3272G>C
  hgvsp: ENSP00000441913.1:p.Gly1091Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2333G>C
  hgvsp: ENSP00000296799.4:p.Gly778Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3272G>C
  hgvsp: ENSP00000296794.6:p.Gly1091Ala
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly1091Ala
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

5-73181895-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181895
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181895
    reference: chr 5
allele count: 1
allele frequency: 8.299030673217368e-6
allele num: 120496
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3276T>C
  hgvsp: ENST00000426542.2:c.3276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.168T>C
  hgvsp: ENST00000512883.1:c.168T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3276T>C
  hgvsp: ENST00000545377.1:c.3276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.455T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3276T>C
  hgvsp: ENST00000287898.5:c.3276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2337T>C
  hgvsp: ENST00000296799.4:c.2337T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3276T>C
  hgvsp: ENST00000437974.1:c.3276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3276T>C
  hgvsp: ENST00000296794.6:c.3276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3276T>C
  hgvsp: ENST00000513042.2:c.3276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu1092Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

5-73181896-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181896
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181896
    reference: chr 5
allele count: 2
allele frequency: 1.659916340216453e-5
allele num: 120488
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3277G>A
  hgvsp: ENSP00000296794.6:p.Val1093Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3277G>A
  hgvsp: ENSP00000287898.5:p.Val1093Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2338G>A
  hgvsp: ENSP00000296799.4:p.Val780Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3277G>A
  hgvsp: ENSP00000441913.1:p.Val1093Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3277G>A
  hgvsp: ENSP00000412175.2:p.Val1093Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.456G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.169G>A
  hgvsp: ENSP00000421081.1:p.Val57Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3277G>A
  hgvsp: ENSP00000411459.1:p.Val1093Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3277G>A
  hgvsp: ENSP00000441436.1:p.Val1093Ile
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7233
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3296
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8089
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val1093Ile
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

5-73181908-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181908
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181908
    reference: chr 5
allele count: 3
allele frequency: 2.494926981803666e-5
allele num: 120244
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3289A>G
  hgvsp: ENSP00000287898.5:p.Thr1097Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.181A>G
  hgvsp: ENSP00000421081.1:p.Thr61Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3289A>G
  hgvsp: ENSP00000296794.6:p.Thr1097Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3289A>G
  hgvsp: ENSP00000441436.1:p.Thr1097Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3289A>G
  hgvsp: ENSP00000412175.2:p.Thr1097Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3289A>G
  hgvsp: ENSP00000441913.1:p.Thr1097Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2350A>G
  hgvsp: ENSP00000296799.4:p.Thr784Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3289A>G
  hgvsp: ENSP00000411459.1:p.Thr1097Ala
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.468A>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29631
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8066
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr1097Ala
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

5-73181913-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181913
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181913
    reference: chr 5
allele count: 4493
allele frequency: 3.744229070484508e-2
allele num: 119998
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3294T>C
  hgvsp: ENST00000513042.2:c.3294T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3294T>C
  hgvsp: ENST00000437974.1:c.3294T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3294T>C
  hgvsp: ENST00000545377.1:c.3294T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3294T>C
  hgvsp: ENST00000296794.6:c.3294T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2355T>C
  hgvsp: ENST00000296799.4:c.2355T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3294T>C
  hgvsp: ENST00000426542.2:c.3294T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.186T>C
  hgvsp: ENST00000512883.1:c.186T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3294T>C
  hgvsp: ENST00000287898.5:c.3294T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.473T>C
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 5.75e1
  variant carriers: 358
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 4.25e1
  variant carriers: 240
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.75e1
  variant carriers: 353
genotype depth: GenotypeDepth
  all individuals: 27153
  bin: 2.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.25e1
  variant carriers: 340
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 3.25e1
  variant carriers: 160
genotype depth: GenotypeDepth
  all individuals: 15643
  bin: 2.75e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 3.75e1
  variant carriers: 220
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 9.75e1
  variant carriers: 669
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.75e1
  variant carriers: 291
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 6.25e1
  variant carriers: 396
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 5.25e1
  variant carriers: 354
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.75e1
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 228
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 32175
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Ala1098Ala
num of homozygotes: 121
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

5-73181920-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181920
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181920
    reference: chr 5
allele count: 1
allele frequency: 8.355475342992263e-6
allele num: 119682
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.480C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3301C>T
  hgvsp: ENSP00000287898.5:p.Arg1101Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3301C>T
  hgvsp: ENSP00000296794.6:p.Arg1101Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3301C>T
  hgvsp: ENSP00000412175.2:p.Arg1101Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.193C>T
  hgvsp: ENSP00000421081.1:p.Arg65Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3301C>T
  hgvsp: ENSP00000441913.1:p.Arg1101Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2362C>T
  hgvsp: ENSP00000296799.4:p.Arg788Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3301C>T
  hgvsp: ENSP00000411459.1:p.Arg1101Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3301C>T
  hgvsp: ENSP00000441436.1:p.Arg1101Cys
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16039
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg1101Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

5-73181921-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181921
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181921
    reference: chr 5
allele count: 5
allele frequency: 4.181161359379181e-5
allele num: 119584
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3302G>A
  hgvsp: ENSP00000441436.1:p.Arg1101His
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3302G>A
  hgvsp: ENSP00000441913.1:p.Arg1101His
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.481G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3302G>A
  hgvsp: ENSP00000296794.6:p.Arg1101His
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3302G>A
  hgvsp: ENSP00000411459.1:p.Arg1101His
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3302G>A
  hgvsp: ENSP00000412175.2:p.Arg1101His
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3302G>A
  hgvsp: ENSP00000287898.5:p.Arg1101His
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2363G>A
  hgvsp: ENSP00000296799.4:p.Arg788His
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.194G>A
  hgvsp: ENSP00000421081.1:p.Arg65His
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7247
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2580
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg1101His
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

5-73181929-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181929
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181929
    reference: chr 5
allele count: 1
allele frequency: 8.388839487945237e-6
allele num: 119206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310G>A
  hgvsp: ENSP00000287898.5:p.Asp1104Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310G>A
  hgvsp: ENSP00000412175.2:p.Asp1104Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310G>A
  hgvsp: ENSP00000441436.1:p.Asp1104Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371G>A
  hgvsp: ENSP00000296799.4:p.Asp791Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310G>A
  hgvsp: ENSP00000296794.6:p.Asp1104Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310G>A
  hgvsp: ENSP00000411459.1:p.Asp1104Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310G>A
  hgvsp: ENSP00000441913.1:p.Asp1104Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202G>A
  hgvsp: ENSP00000421081.1:p.Asp68Asn
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2577
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp1104Asn
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

5-73181930-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181930
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181930
    reference: chr 5
allele count: 2
allele frequency: 1.678331067586392e-5
allele num: 119166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310+1G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310+1G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489+1G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371+1G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310+1G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310+1G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310+1G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202+1G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310+1G>A
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2577
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7639
  bin: 6.75e1
  variant carriers: 0
hgvs: c.3310+1G>A
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

5-73181943-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181943
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181943
    reference: chr 5
allele count: 1
allele frequency: 8.438391305081599e-6
allele num: 118506
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310+14A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371+14A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310+14A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489+14A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310+14A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310+14A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310+14A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310+14A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202+14A>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25324
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3168
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

5-73181947-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181947
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181947
    reference: chr 5
allele count: 2
allele frequency: 1.69061707523246e-5
allele num: 118300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310+18G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371+18G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310+18G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310+18G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310+18G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310+18G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310+18G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202+18G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489+18G>A
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6523
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1080
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29934
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

5-73181951-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181951
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181951
    reference: chr 5
allele count: 1
allele frequency: 8.466683600033867e-6
allele num: 118110
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310+22A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371+22A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310+22A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310+22A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310+22A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202+22A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310+22A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310+22A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489+22A>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7538
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6524
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-73181952-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181952
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181952
    reference: chr 5
allele count: 1
allele frequency: 8.468834688346883e-6
allele num: 118080
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202+23A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310+23A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310+23A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310+23A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489+23A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310+23A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310+23A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371+23A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310+23A>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7535
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-73181956-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181956
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181956
    reference: chr 5
allele count: 1
allele frequency: 8.491270973439305e-6
allele num: 117768
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371+27C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310+27C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310+27C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310+27C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489+27C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310+27C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310+27C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310+27C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202+27C>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6526
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

5-73181958-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181958
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181958
    reference: chr 5
allele count: 74
allele frequency: 6.291874978743665e-4
allele num: 117612
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310+29C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371+29C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310+29C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310+29C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310+29C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202+29C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310+29C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310+29C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489+29C>T
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 24180
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15065
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7123
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3597
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6588
  bin: 9.75e1
  variant carriers: 71
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 2
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

5-73181963-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181963
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181963
    reference: chr 5
allele count: 1
allele frequency: 8.528348229514908e-6
allele num: 117256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310+34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310+34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371+34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310+34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202+34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310+34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489+34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310+34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310+34C>T
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2419
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD

5-73181968-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181968
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181968
    reference: chr 5
allele count: 16
allele frequency: 1.367661640510138e-4
allele num: 116988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310+39A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202+39A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371+39A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310+39A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310+39A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489+39A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310+39A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310+39A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310+39A>T
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23603
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14860
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2738
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3599
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2289
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD

5-73181970-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181970
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181970
    reference: chr 5
allele count: 1
allele frequency: 8.558273282782466e-6
allele num: 116846
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310+41A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310+41A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310+41A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371+41A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310+41A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310+41A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310+41A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202+41A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489+41A>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS

5-73181972-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181972
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181972
    reference: chr 5
allele count: 1
allele frequency: 8.571183680466272e-6
allele num: 116670
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310+43T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310+43T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310+43T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202+43T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310+43T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489+43T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310+43T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371+43T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310+43T>C
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14788
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6569
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7395
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27265
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/5-73181976-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73181976
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73181976
    reference: chr 5
allele count: 4
allele frequency: 3.440623440967504e-5
allele num: 116258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2371+47C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3310+47C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3310+47C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3310+47C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3310+47C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3310+47C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.489+47C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3310+47C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.202+47C>A
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23592
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26495
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

5-73183384-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183384
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183384
    reference: chr 5
allele count: 1
allele frequency: 4.253509145044662e-5
allele num: 23510
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3311-44C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.75C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3311-44C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3311-44C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3311-44C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.203-44C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.490-44C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2372-44C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3311-44C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3311-44C>G
  variant of: http://identifiers.org/hgnc/30322
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum

5-73183388-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183388
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183388
    reference: chr 5
allele count: 1
allele frequency: 4.23405876873571e-5
allele num: 23618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3311-40G>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2372-40G>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3311-40G>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3311-40G>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.79G>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.203-40G>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3311-40G>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3311-40G>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.490-40G>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3311-40G>T
  variant of: http://identifiers.org/hgnc/30322
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32586
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25872
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5256
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-73183398-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183398
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183398
    reference: chr 5
allele count: 22
allele frequency: 9.214273747696431e-4
allele num: 23876
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.89A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.203-30A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.490-30A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3311-30A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3311-30A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2372-30A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3311-30A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3311-30A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3311-30A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3311-30A>C
  variant of: http://identifiers.org/hgnc/30322
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14252
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30938
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10542
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

5-73183405-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183405
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183405
    reference: chr 5
allele count: 1
allele frequency: 4.133256179217988e-5
allele num: 24194
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.490-23C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.96C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3311-23C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3311-23C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3311-23C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2372-23C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3311-23C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.203-23C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3311-23C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3311-23C>T
  variant of: http://identifiers.org/hgnc/30322
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28863
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25822
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

5-73183409-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183409
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183409
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 24530
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3311-19T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2372-19T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.490-19T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.100T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3311-19T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3311-19T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.203-19T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3311-19T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3311-19T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3311-19T>C
  variant of: http://identifiers.org/hgnc/30322
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27459
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18241
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3434
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 6.75e1
  variant carriers: 2
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

5-73183414-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183414
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183414
    reference: chr 5
allele count: 1
allele frequency: 4.023497223786915e-5
allele num: 24854
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3311-14T>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3311-14T>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2372-14T>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3311-14T>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3311-14T>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.105T>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.490-14T>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3311-14T>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3311-14T>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.203-14T>A
  variant of: http://identifiers.org/hgnc/30322
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25826
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23881
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

5-73183418-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183418
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183418
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 25184
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3311-10T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.490-10T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3311-10T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3311-10T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3311-10T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.203-10T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.109T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2372-10T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3311-10T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3311-10T>C
  variant of: http://identifiers.org/hgnc/30322
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21493
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

5-73183419-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183419
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183419
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 25214
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3311-9T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2372-9T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3311-9T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.490-9T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.110T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3311-9T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.203-9T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3311-9T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3311-9T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3311-9T>C
  variant of: http://identifiers.org/hgnc/30322
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21864
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22591
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-73183424-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183424
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183424
    reference: chr 5
allele count: 74
allele frequency: 2.87088764742396e-3
allele num: 25776
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3311-4A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3311-4A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3311-4A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.115A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3311-4A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3311-4A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.203-4A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.490-4A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3311-4A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2372-4A>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4793
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21830
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 24189
  bin: 7.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 8.75e1
  variant carriers: 3
hgvs: c.3311-4A>G
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

5-73183436-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183436
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183436
    reference: chr 5
allele count: 1
allele frequency: 3.711401425178147e-5
allele num: 26944
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3319G>C
  hgvsp: ENSP00000411459.1:p.Ala1107Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3319G>C
  hgvsp: ENSP00000296794.6:p.Ala1107Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.498G>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.211G>C
  hgvsp: ENSP00000421081.1:p.Ala71Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3319G>C
  hgvsp: ENSP00000441913.1:p.Ala1107Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3319G>C
  hgvsp: ENSP00000287898.5:p.Ala1107Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2380G>C
  hgvsp: ENSP00000296799.4:p.Ala794Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3319G>C
  hgvsp: ENSP00000412175.2:p.Ala1107Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3319G>C
  hgvsp: ENSP00000441436.1:p.Ala1107Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.127G>C
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala1107Pro
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

5-73183445-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183445
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183445
    reference: chr 5
allele count: 4
allele frequency: 1.436265709156194e-4
allele num: 27850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2389C>T
  hgvsp: ENST00000296799.4:c.2389C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3328C>T
  hgvsp: ENST00000513042.2:c.3328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3328C>T
  hgvsp: ENST00000296794.6:c.3328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.136C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.507C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.220C>T
  hgvsp: ENST00000512883.1:c.220C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3328C>T
  hgvsp: ENST00000545377.1:c.3328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3328C>T
  hgvsp: ENST00000437974.1:c.3328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3328C>T
  hgvsp: ENST00000287898.5:c.3328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3328C>T
  hgvsp: ENST00000426542.2:c.3328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29536
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15978
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15512
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26947
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu1110Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

5-73183458-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183458
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183458
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 29108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.520T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3341T>C
  hgvsp: ENSP00000411459.1:p.Leu1114Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3341T>C
  hgvsp: ENSP00000287898.5:p.Leu1114Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.233T>C
  hgvsp: ENSP00000421081.1:p.Leu78Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3341T>C
  hgvsp: ENSP00000441436.1:p.Leu1114Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2402T>C
  hgvsp: ENSP00000296799.4:p.Leu801Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.149T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3341T>C
  hgvsp: ENSP00000296794.6:p.Leu1114Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3341T>C
  hgvsp: ENSP00000441913.1:p.Leu1114Pro
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3341T>C
  hgvsp: ENSP00000412175.2:p.Leu1114Pro
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 14336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30677
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu1114Pro
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

5-73183468-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183468
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183468
    reference: chr 5
allele count: 33
allele frequency: 1.112609575185435e-3
allele num: 29660
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3351A>G
  hgvsp: ENST00000437974.1:c.3351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.159A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.243A>G
  hgvsp: ENST00000512883.1:c.243A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3351A>G
  hgvsp: ENST00000296794.6:c.3351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2412A>G
  hgvsp: ENST00000296799.4:c.2412A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3351A>G
  hgvsp: ENST00000513042.2:c.3351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3351A>G
  hgvsp: ENST00000287898.5:c.3351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3351A>G
  hgvsp: ENST00000426542.2:c.3351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3351A>G
  hgvsp: ENST00000545377.1:c.3351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.530A>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30306
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14345
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5862
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 7.25e1
  variant carriers: 1
hgvs: p.Leu1117Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-73183477-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183477
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183477
    reference: chr 5
allele count: 1
allele frequency: 3.340459647247461e-5
allele num: 29936
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3360A>C
  hgvsp: ENSP00000441913.1:p.Lys1120Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.252A>C
  hgvsp: ENSP00000421081.1:p.Lys84Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2421A>C
  hgvsp: ENSP00000296799.4:p.Lys807Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3360A>C
  hgvsp: ENSP00000411459.1:p.Lys1120Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.168A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.539A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3360A>C
  hgvsp: ENSP00000441436.1:p.Lys1120Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3360A>C
  hgvsp: ENSP00000296794.6:p.Lys1120Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3360A>C
  hgvsp: ENSP00000287898.5:p.Lys1120Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3360A>C
  hgvsp: ENSP00000412175.2:p.Lys1120Asn
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15043
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7000
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys1120Asn
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

5-73183482-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183482
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183482
    reference: chr 5
allele count: 1
allele frequency: 3.334667200213418e-5
allele num: 29988
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.544A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3365A>G
  hgvsp: ENSP00000287898.5:p.Gln1122Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3365A>G
  hgvsp: ENSP00000441436.1:p.Gln1122Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2426A>G
  hgvsp: ENSP00000296799.4:p.Gln809Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.173A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.257A>G
  hgvsp: ENSP00000421081.1:p.Gln86Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3365A>G
  hgvsp: ENSP00000296794.6:p.Gln1122Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3365A>G
  hgvsp: ENSP00000411459.1:p.Gln1122Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3365A>G
  hgvsp: ENSP00000412175.2:p.Gln1122Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3365A>G
  hgvsp: ENSP00000441913.1:p.Gln1122Arg
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15706
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15540
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln1122Arg
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-73183486-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183486
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183486
    reference: chr 5
allele count: 1
allele frequency: 3.336892685531233e-5
allele num: 29968
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.261A>G
  hgvsp: ENST00000512883.1:c.261A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3369A>G
  hgvsp: ENST00000287898.5:c.3369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3369A>G
  hgvsp: ENST00000545377.1:c.3369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.548A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3369A>G
  hgvsp: ENST00000513042.2:c.3369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3369A>G
  hgvsp: ENST00000426542.2:c.3369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2430A>G
  hgvsp: ENST00000296799.4:c.2430A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.177A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3369A>G
  hgvsp: ENST00000437974.1:c.3369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3369A>G
  hgvsp: ENST00000296794.6:c.3369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27916
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16480
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys1123Lys
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

5-73183491-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183491
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183491
    reference: chr 5
allele count: 1
allele frequency: 3.363153292527074e-5
allele num: 29734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3374T>A
  hgvsp: ENSP00000296794.6:p.Ile1125Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3374T>A
  hgvsp: ENSP00000411459.1:p.Ile1125Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.182T>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3374T>A
  hgvsp: ENSP00000441436.1:p.Ile1125Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3374T>A
  hgvsp: ENSP00000287898.5:p.Ile1125Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.266T>A
  hgvsp: ENSP00000421081.1:p.Ile89Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2435T>A
  hgvsp: ENSP00000296799.4:p.Ile812Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3374T>A
  hgvsp: ENSP00000441913.1:p.Ile1125Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.553T>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3374T>A
  hgvsp: ENSP00000412175.2:p.Ile1125Asn
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile1125Asn
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

5-73183500-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183500
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183500
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 29158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3383C>T
  hgvsp: ENSP00000287898.5:p.Ala1128Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2444C>T
  hgvsp: ENSP00000296799.4:p.Ala815Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.275C>T
  hgvsp: ENSP00000421081.1:p.Ala92Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3383C>T
  hgvsp: ENSP00000412175.2:p.Ala1128Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3383C>T
  hgvsp: ENSP00000441913.1:p.Ala1128Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.562C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3383C>T
  hgvsp: ENSP00000411459.1:p.Ala1128Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3383C>T
  hgvsp: ENSP00000296794.6:p.Ala1128Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3383C>T
  hgvsp: ENSP00000441436.1:p.Ala1128Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.191C>T
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23545
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20714
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala1128Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

5-73183501-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183501
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183501
    reference: chr 5
allele count: 5
allele frequency: 1.723068440278448e-4
allele num: 29018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.563C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3384C>T
  hgvsp: ENST00000296794.6:c.3384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.192C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3384C>T
  hgvsp: ENST00000437974.1:c.3384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2445C>T
  hgvsp: ENST00000296799.4:c.2445C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3384C>T
  hgvsp: ENST00000426542.2:c.3384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.276C>T
  hgvsp: ENST00000512883.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3384C>T
  hgvsp: ENST00000287898.5:c.3384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3384C>T
  hgvsp: ENST00000545377.1:c.3384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3384C>T
  hgvsp: ENST00000513042.2:c.3384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21005
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23260
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2189
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Ala1128Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff

5-73183502-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183502
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183502
    reference: chr 5
allele count: 3
allele frequency: 1.036627505183138e-4
allele num: 28940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3385G>A
  hgvsp: ENSP00000296794.6:p.Val1129Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.193G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3385G>A
  hgvsp: ENSP00000441436.1:p.Val1129Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.277G>A
  hgvsp: ENSP00000421081.1:p.Val93Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3385G>A
  hgvsp: ENSP00000441913.1:p.Val1129Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3385G>A
  hgvsp: ENSP00000411459.1:p.Val1129Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3385G>A
  hgvsp: ENSP00000287898.5:p.Val1129Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.564G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2446G>A
  hgvsp: ENSP00000296799.4:p.Val816Ile
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3385G>A
  hgvsp: ENSP00000412175.2:p.Val1129Ile
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21240
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val1129Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-73183502-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183502
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183502
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 28940
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3385G>C
  hgvsp: ENSP00000412175.2:p.Val1129Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3385G>C
  hgvsp: ENSP00000411459.1:p.Val1129Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2446G>C
  hgvsp: ENSP00000296799.4:p.Val816Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3385G>C
  hgvsp: ENSP00000441913.1:p.Val1129Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.277G>C
  hgvsp: ENSP00000421081.1:p.Val93Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.564G>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3385G>C
  hgvsp: ENSP00000441436.1:p.Val1129Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3385G>C
  hgvsp: ENSP00000287898.5:p.Val1129Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.193G>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3385G>C
  hgvsp: ENSP00000296794.6:p.Val1129Leu
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21240
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23023
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val1129Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

5-73183507-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183507
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183507
    reference: chr 5
allele count: 1
allele frequency: 3.484806244772791e-5
allele num: 28696
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3387+3A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2448+3A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3387+3A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3387+3A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.279+3A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3387+3A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3387+3A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.566+3A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3387+3A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.195+3A>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22793
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2789
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 6.75e1
  variant carriers: 0
hgvs: c.3387+3A>G
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

5-73183509-GTA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183509
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183507
    reference: chr 5
allele count: 1
allele frequency: 3.5253472467038e-5
allele num: 28366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.566+9_566+10delAT
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.195+9_195+10delAT
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3387+9_3387+10delAT
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3387+9_3387+10delAT
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3387+9_3387+10delAT
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.279+9_279+10delAT
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3387+9_3387+10delAT
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3387+9_3387+10delAT
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3387+9_3387+10delAT
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2448+9_2448+10delAT
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 2.5e0
  variant carriers: 0
hgvs: c.3387+9_3387+10delAT
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: GTA
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

5-73183516-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183516
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183516
    reference: chr 5
allele count: 1
allele frequency: 3.585257421482863e-5
allele num: 27892
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3387+12A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2448+12A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3387+12A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3387+12A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.566+12A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3387+12A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3387+12A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.195+12A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.279+12A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3387+12A>T
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26089
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18039
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1608
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5516
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS

5-73183519-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183519
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183519
    reference: chr 5
allele count: 2
allele frequency: 7.26427429899753e-5
allele num: 27532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3387+15G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.279+15G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3387+15G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.566+15G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.195+15G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3387+15G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2448+15G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3387+15G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3387+15G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3387+15G>A
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16701
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

5-73183540-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183540
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183540
    reference: chr 5
allele count: 1
allele frequency: 4.029983074071089e-5
allele num: 24814
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.195+36G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3387+36G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2448+36G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3387+36G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3387+36G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3387+36G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3387+36G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3387+36G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.566+36G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.279+36G>A
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30757
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11906
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1929
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4018
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28744
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

5-73183547-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183547
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183547
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 24086
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3387+43C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3387+43C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3387+43C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3387+43C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3387+43C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.279+43C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.566+43C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3387+43C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2448+43C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.195+43C>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30369
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3872
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/5-73183552-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73183552
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73183552
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 23554
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3387+48C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3387+48C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3387+48C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.279+48C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3387+48C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.195+48C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3387+48C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.566+48C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2448+48C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3387+48C>A
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11822
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

5-73187835-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187835
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187835
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 43910
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.196-42C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3388-42C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3388-42C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3388-42C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2449-42C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.280-42C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.567-42C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3388-42C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3388-42C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3388-42C>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28069
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9791
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11506
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2648
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7351
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4337
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

5-73187837-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187837
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187837
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 44284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3388-40A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3388-40A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3388-40A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.196-40A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2449-40A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.280-40A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3388-40A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.567-40A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3388-40A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3388-40A>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9363
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28432
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4415
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3554
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

5-73187840-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187840
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187840
    reference: chr 5
allele count: 1
allele frequency: 2.237637055269635e-5
allele num: 44690
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3388-37A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3388-37A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3388-37A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2449-37A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.196-37A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3388-37A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3388-37A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3388-37A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.280-37A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.567-37A>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11330
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8741
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3541
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2648
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3393
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

5-73187842-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187842
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187842
    reference: chr 5
allele count: 3
allele frequency: 6.68985817500669e-5
allele num: 44844
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3388-35G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2449-35G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3388-35G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.280-35G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3388-35G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3388-35G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.196-35G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3388-35G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3388-35G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.567-35G>A
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11227
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

5-73187843-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187843
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187843
    reference: chr 5
allele count: 46
allele frequency: 1.025138170796934e-3
allele num: 44872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.567-34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3388-34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3388-34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3388-34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.280-34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3388-34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3388-34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3388-34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2449-34C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.196-34C>T
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29297
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 11171
  bin: 1.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4180
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 3
num of homozygotes: 1
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

5-73187850-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187850
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187850
    reference: chr 5
allele count: 1
allele frequency: 2.165720968510417e-5
allele num: 46174
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2449-27A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.196-27A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3388-27A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3388-27A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3388-27A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3388-27A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3388-27A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.280-27A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.567-27A>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3388-27A>T
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6541
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5695
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-73187871-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187871
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187871
    reference: chr 5
allele count: 13
allele frequency: 2.550820186798524e-4
allele num: 50964
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3388-6A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3388-6A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2449-6A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.280-6A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.567-6A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3388-6A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.196-6A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3388-6A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3388-6A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3388-6A>G
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7365
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10564
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31059
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3621
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2289
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
hgvs: c.3388-6A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

5-73187872-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187872
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187872
    reference: chr 5
allele count: 1
allele frequency: 1.946964682060667e-5
allele num: 51362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.280-5T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3388-5T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3388-5T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2449-5T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3388-5T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3388-5T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3388-5T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3388-5T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.196-5T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.567-5T>C
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31043
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 4.25e1
  variant carriers: 0
hgvs: c.3388-5T>C
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

5-73187877-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187877
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187877
    reference: chr 5
allele count: 1
allele frequency: 1.90215323746481e-5
allele num: 52572
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.196G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3388G>A
  hgvsp: ENSP00000441436.1:p.Asp1130Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2449G>A
  hgvsp: ENSP00000296799.4:p.Asp817Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3388G>A
  hgvsp: ENSP00000287898.5:p.Asp1130Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.280G>A
  hgvsp: ENSP00000421081.1:p.Asp94Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3388G>A
  hgvsp: ENSP00000412175.2:p.Asp1130Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.567G>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3388G>A
  hgvsp: ENSP00000441913.1:p.Asp1130Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3388G>A
  hgvsp: ENSP00000411459.1:p.Asp1130Asn
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3388G>A
  hgvsp: ENSP00000296794.6:p.Asp1130Asn
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp1130Asn
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/5-73187899-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187899
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187899
    reference: chr 5
allele count: 1
allele frequency: 1.784694460308395e-5
allele num: 56032
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3410C>A
  hgvsp: ENSP00000411459.1:p.Ser1137Tyr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3410C>A
  hgvsp: ENSP00000412175.2:p.Ser1137Tyr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3410C>A
  hgvsp: ENSP00000441913.1:p.Ser1137Tyr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.302C>A
  hgvsp: ENSP00000421081.1:p.Ser101Tyr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.589C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2471C>A
  hgvsp: ENSP00000296799.4:p.Ser824Tyr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.218C>A
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3410C>A
  hgvsp: ENSP00000296794.6:p.Ser1137Tyr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3410C>A
  hgvsp: ENSP00000287898.5:p.Ser1137Tyr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3410C>A
  hgvsp: ENSP00000441436.1:p.Ser1137Tyr
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13443
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31026
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser1137Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

5-73187899-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187899
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187899
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 56032
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3410C>T
  hgvsp: ENSP00000411459.1:p.Ser1137Phe
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.302C>T
  hgvsp: ENSP00000421081.1:p.Ser101Phe
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3410C>T
  hgvsp: ENSP00000441436.1:p.Ser1137Phe
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3410C>T
  hgvsp: ENSP00000441913.1:p.Ser1137Phe
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.589C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3410C>T
  hgvsp: ENSP00000287898.5:p.Ser1137Phe
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3410C>T
  hgvsp: ENSP00000296794.6:p.Ser1137Phe
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.218C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2471C>T
  hgvsp: ENSP00000296799.4:p.Ser824Phe
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3410C>T
  hgvsp: ENSP00000412175.2:p.Ser1137Phe
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29517
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser1137Phe
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

5-73187900-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187900
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187900
    reference: chr 5
allele count: 1
allele frequency: 1.790061578118287e-5
allele num: 55864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2472C>T
  hgvsp: ENST00000296799.4:c.2472C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.303C>T
  hgvsp: ENST00000512883.1:c.303C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3411C>T
  hgvsp: ENST00000426542.2:c.3411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3411C>T
  hgvsp: ENST00000513042.2:c.3411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3411C>T
  hgvsp: ENST00000545377.1:c.3411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3411C>T
  hgvsp: ENST00000437974.1:c.3411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3411C>T
  hgvsp: ENST00000296794.6:c.3411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.590C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.219C>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3411C>T
  hgvsp: ENST00000287898.5:c.3411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6231
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser1137Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

5-73187908-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187908
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187908
    reference: chr 5
allele count: 1
allele frequency: 1.791793585378964e-5
allele num: 55810
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3419A>G
  hgvsp: ENSP00000296794.6:p.Lys1140Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3419A>G
  hgvsp: ENSP00000411459.1:p.Lys1140Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.311A>G
  hgvsp: ENSP00000421081.1:p.Lys104Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3419A>G
  hgvsp: ENSP00000287898.5:p.Lys1140Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.227A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3419A>G
  hgvsp: ENSP00000441913.1:p.Lys1140Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3419A>G
  hgvsp: ENSP00000441436.1:p.Lys1140Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3419A>G
  hgvsp: ENSP00000412175.2:p.Lys1140Arg
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.598A>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2480A>G
  hgvsp: ENSP00000296799.4:p.Lys827Arg
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6473
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2780
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys1140Arg
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

5-73187914-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187914
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187914
    reference: chr 5
allele count: 1
allele frequency: 1.809692714177133e-5
allele num: 55258
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3425T>C
  hgvsp: ENSP00000296794.6:p.Ile1142Thr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.317T>C
  hgvsp: ENSP00000421081.1:p.Ile106Thr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2486T>C
  hgvsp: ENSP00000296799.4:p.Ile829Thr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3425T>C
  hgvsp: ENSP00000411459.1:p.Ile1142Thr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3425T>C
  hgvsp: ENSP00000287898.5:p.Ile1142Thr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3425T>C
  hgvsp: ENSP00000441913.1:p.Ile1142Thr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3425T>C
  hgvsp: ENSP00000441436.1:p.Ile1142Thr
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.233T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.604T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3425T>C
  hgvsp: ENSP00000412175.2:p.Ile1142Thr
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6836
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31827
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile1142Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/5-73187946-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187946
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187946
    reference: chr 5
allele count: 4
allele frequency: 8.052178114179885e-5
allele num: 49676
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3457A>C
  hgvsp: ENSP00000412175.2:p.Met1153Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3457A>C
  hgvsp: ENSP00000441913.1:p.Met1153Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3457A>C
  hgvsp: ENSP00000411459.1:p.Met1153Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.349A>C
  hgvsp: ENSP00000421081.1:p.Met117Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.265A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3457A>C
  hgvsp: ENSP00000441436.1:p.Met1153Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3457A>C
  hgvsp: ENSP00000287898.5:p.Met1153Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.636A>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2518A>C
  hgvsp: ENSP00000296799.4:p.Met840Leu
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3457A>C
  hgvsp: ENSP00000296794.6:p.Met1153Leu
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Met1153Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

5-73187952-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187952
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187952
    reference: chr 5
allele count: 1
allele frequency: 2.086637175527919e-5
allele num: 47924
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.642C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3463C>G
  hgvsp: ENSP00000441436.1:p.Leu1155Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2524C>G
  hgvsp: ENSP00000296799.4:p.Leu842Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.355C>G
  hgvsp: ENSP00000421081.1:p.Leu119Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3463C>G
  hgvsp: ENSP00000287898.5:p.Leu1155Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3463C>G
  hgvsp: ENSP00000296794.6:p.Leu1155Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3463C>G
  hgvsp: ENSP00000412175.2:p.Leu1155Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3463C>G
  hgvsp: ENSP00000411459.1:p.Leu1155Val
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.271C>G
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3463C>G
  hgvsp: ENSP00000441913.1:p.Leu1155Val
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29819
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu1155Val
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

5-73187954-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187954
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187954
    reference: chr 5
allele count: 3
allele frequency: 6.255995328856821e-5
allele num: 47954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3465G>C
  hgvsp: ENST00000426542.2:c.3465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3465G>C
  hgvsp: ENST00000287898.5:c.3465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.273G>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3465G>C
  hgvsp: ENST00000513042.2:c.3465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3465G>C
  hgvsp: ENST00000296794.6:c.3465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.357G>C
  hgvsp: ENST00000512883.1:c.357G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2526G>C
  hgvsp: ENST00000296799.4:c.2526G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3465G>C
  hgvsp: ENST00000545377.1:c.3465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.644G>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3465G>C
  hgvsp: ENST00000437974.1:c.3465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8122
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu1155Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

5-73187969-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187969
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187969
    reference: chr 5
allele count: 1
allele frequency: 2.255910485471936e-5
allele num: 44328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.288T>C
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3480T>C
  hgvsp: ENST00000437974.1:c.3480T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3480T>C
  hgvsp: ENST00000296794.6:c.3480T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3480T>C
  hgvsp: ENST00000426542.2:c.3480T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3480T>C
  hgvsp: ENST00000287898.5:c.3480T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3480T>C
  hgvsp: ENST00000545377.1:c.3480T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.372T>C
  hgvsp: ENST00000512883.1:c.372T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2541T>C
  hgvsp: ENST00000296799.4:c.2541T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3480T>C
  hgvsp: ENST00000513042.2:c.3480T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.659T>C
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7443
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2647
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser1160Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ

5-73187973-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73187973
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 73187973
    reference: chr 5
allele count: 1
allele frequency: 2.299379167624741e-5
allele num: 43490
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000421081
  ensembl transcript: ENST00000512883
  gene symbol: ARHGEF28
  hgvsc: ENST00000512883.1:c.376G>T
  hgvsp: ENSP00000421081.1:p.Gly126Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296799
  ensembl transcript: ENST00000296799
  gene symbol: ARHGEF28
  hgvsc: ENST00000296799.4:c.2545G>T
  hgvsp: ENSP00000296799.4:p.Gly849Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000504003
  gene symbol: ARHGEF28
  hgvsc: ENST00000504003.1:n.292G>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000412175
  ensembl transcript: ENST00000426542
  gene symbol: ARHGEF28
  hgvsc: ENST00000426542.2:c.3484G>T
  hgvsp: ENSP00000412175.2:p.Gly1162Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000296794
  ensembl transcript: ENST00000296794
  gene symbol: ARHGEF28
  hgvsc: ENST00000296794.6:c.3484G>T
  hgvsp: ENSP00000296794.6:p.Gly1162Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000411459
  ensembl transcript: ENST00000437974
  gene symbol: ARHGEF28
  hgvsc: ENST00000437974.1:c.3484G>T
  hgvsp: ENSP00000411459.1:p.Gly1162Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441913
  ensembl transcript: ENST00000545377
  gene symbol: ARHGEF28
  hgvsc: ENST00000545377.1:c.3484G>T
  hgvsp: ENSP00000441913.1:p.Gly1162Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000287898
  ensembl transcript: ENST00000287898
  gene symbol: ARHGEF28
  hgvsc: ENST00000287898.5:c.3484G>T
  hgvsp: ENSP00000287898.5:p.Gly1162Cys
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214944
  ensembl transcript: ENST00000510312
  gene symbol: ARHGEF28
  hgvsc: ENST00000510312.2:n.663G>T
  variant of: http://identifiers.org/hgnc/30322
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214944
  ensembl protein: ENSP00000441436
  ensembl transcript: ENST00000513042
  gene symbol: ARHGEF28
  hgvsc: ENST00000513042.2:c.3484G>T
  hgvsp: ENSP00000441436.1:p.Gly1162Cys
  variant of: http://identifiers.org/hgnc/30322
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7290
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29630
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly1162Cys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8107
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4696
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3291
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3682
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00048007681229e-5
allele num: 66656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.47e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.14e-1

FS
type: SiteQuality
SIO_000300: 5.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.005e0

QD
type: SiteQuality
SIO_000300: 1.467e1

DP
type: SiteQuality
SIO_000300: 1.639724e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.31e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4696
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35532
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8107
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3686
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.237136465324385e-3
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.113e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.486e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.48e-1

DP
type: SiteQuality
SIO_000300: 1.639765e6

GenotypeQuality
all individuals: 181
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3291
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3688
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35518
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4699
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8098
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.085686465433301e-5
allele num: 16432
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 1.639495e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.86e-2

QD
type: SiteQuality
SIO_000300: 9.779999999999999e0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1134
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4700
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8090
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35474
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3694
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500690317546071e-5
allele num: 66636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

DP
type: SiteQuality
SIO_000300: 1.638961e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.032e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

QD
type: SiteQuality
SIO_000300: 1.209e1

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 43
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35449
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4703
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00147072065312e-5
allele num: 66634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

FS
type: SiteQuality
SIO_000300: 3.643e0

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.638977e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.431e0

QD
type: SiteQuality
SIO_000300: 1.305e1

GenotypeQuality
all individuals: 35084
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
all individuals: 87
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4706
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.505992970650966e-5
allele num: 66578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.69e-1

QD
type: SiteQuality
SIO_000300: 1.392e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.49e-2

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 1.8427e1

VQSLOD
type: SiteQuality
SIO_000300: -2.109e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

MQRankSum
type: SiteQuality
SIO_000300: -3.44e-1

DP
type: SiteQuality
SIO_000300: 1.635708e6

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 140
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 711
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 2306
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3040
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8658
bin: 9.75e1
variant carriers: 4349

GenotypeQuality
all individuals: 973
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7451
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1047
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 3396
bin: 7.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 346
allele frequency: 5.231327487148473e-2
allele num: 6614
num of homozygotes: 11

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 71
allele frequency: 7.250816993464053e-3
allele num: 9792
num of homozygotes: 0

South Asian
type: Population
allele count: 193
allele frequency: 1.205496564647096e-2
allele num: 16010
num of homozygotes: 1

Other
type: Population
allele count: 44
allele frequency: 4.966139954853273e-2
allele num: 886
num of homozygotes: 1

Latino
type: Population
allele count: 215
allele frequency: 1.86373092926491e-2
allele num: 11536
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 3624
allele frequency: 5.446675483948539e-2
allele num: 66536
num of homozygotes: 107

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

QD
type: SiteQuality
SIO_000300: 1.33e1

FS
type: SiteQuality
SIO_000300: 5.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.64e-1

DP
type: SiteQuality
SIO_000300: 1.821031e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e0

VQSLOD
type: SiteQuality
SIO_000300: 4.71e0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6522
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3189
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1345
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
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variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2583
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7711
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32419
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504483360414034e-5
allele num: 66468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.394e1

DP
type: SiteQuality
SIO_000300: 1.701519e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.254e0

FS
type: SiteQuality
SIO_000300: 1.058e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.13e-1

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 145
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 6526
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1126
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7693
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variant carriers: 0

GenotypeQuality
all individuals: 1083
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variant carriers: 0

GenotypeQuality
all individuals: 32226
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variant carriers: 0

GenotypeQuality
all individuals: 132
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variant carriers: 0

GenotypeQuality
all individuals: 90
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variant carriers: 0

GenotypeQuality
all individuals: 3187
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3635
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.373486297004461e-5
allele num: 15690
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021659174499387e-4
allele num: 9788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.009691205682297e-5
allele num: 66452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

DP
type: SiteQuality
SIO_000300: 1.699267e6

FS
type: SiteQuality
SIO_000300: 5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.888e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.65e0

QD
type: SiteQuality
SIO_000300: 1.299e1

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1345
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3181
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1550
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variant carriers: 0

GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
all individuals: 7645
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
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variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.5e0
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GenotypeQuality
all individuals: 3631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31577
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6523
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506931886678722e-5
allele num: 66360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 2.793e1

MQRankSum
type: SiteQuality
SIO_000300: 3.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.002e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-1

DP
type: SiteQuality
SIO_000300: 1.689969e6

VQSLOD
type: SiteQuality
SIO_000300: 3.34e-1

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6525
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3181
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
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GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 31520
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variant carriers: 0

GenotypeQuality
all individuals: 3628
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variant carriers: 0

GenotypeQuality
all individuals: 65
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GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 1597
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variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.014772384684956e-5
allele num: 66340
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.41e0

QD
type: SiteQuality
SIO_000300: 1.229e1

VQSLOD
type: SiteQuality
SIO_000300: 6.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.815e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

DP
type: SiteQuality
SIO_000300: 1.68901e6

GenotypeQuality
all individuals: 2575
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3614
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6521
bin: 9.75e1
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GenotypeQuality
all individuals: 7585
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2202
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30266
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66172
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.389e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.792e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQRankSum
type: SiteQuality
SIO_000300: 2.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.446e0

DP
type: SiteQuality
SIO_000300: 1.672971e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

QD
type: SiteQuality
SIO_000300: 1.438e1

VQSLOD
type: SiteQuality
SIO_000300: -2.178e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 9.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.025077895755816e-5
allele num: 66114
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.043e0

FS
type: SiteQuality
SIO_000300: 2.901e0

DP
type: SiteQuality
SIO_000300: 1.668381e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.86e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.71e-1

QD
type: SiteQuality
SIO_000300: 1.196e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.023331968890708e-4
allele num: 9772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.236e-1

FS
type: SiteQuality
SIO_000300: 1.338e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 7.83e0

DP
type: SiteQuality
SIO_000300: 1.664153e6

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2572
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.023331968890708e-4
allele num: 9772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.52e1

MQRankSum
type: SiteQuality
SIO_000300: -5.13e-1

DP
type: SiteQuality
SIO_000300: 1.663108e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.879999999999999e-1

FS
type: SiteQuality
SIO_000300: 3.128e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66008
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.23e1

FS
type: SiteQuality
SIO_000300: 1.345e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.046e0

DP
type: SiteQuality
SIO_000300: 1.658726e6

VQSLOD
type: SiteQuality
SIO_000300: 4.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.62e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.547659471258792e-5
allele num: 65968
num of homozygotes: 0

African
type: Population
allele count: 65
allele frequency: 6.654381654381655e-3
allele num: 9768
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.206525511975009e-4
allele num: 11524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.353e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

DP
type: SiteQuality
SIO_000300: 1.659286e6

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.663e0

QD
type: SiteQuality
SIO_000300: 1.205e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517312536036173e-5
allele num: 65906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13982
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.445e0

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 7.086e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.124e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 1.08695652173913e-3
allele num: 13800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.518787400139728e-5
allele num: 65842
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.342e0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 8.4e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519295047098146e-5
allele num: 65820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.68e-1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.58e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 402
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variant carriers: 0

GenotypeQuality
all individuals: 1347
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520172691617768e-5
allele num: 65782
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.55e0

DP
type: SiteQuality
SIO_000300: 1.648331e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 3.356e0

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

QD
type: SiteQuality
SIO_000300: 1.51e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9732
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.091246878235975e-5
allele num: 65668
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13306
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.002e0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.123e0

QD
type: SiteQuality
SIO_000300: 1.186e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1658
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 9.646922631680494e-5
allele num: 10366
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7422
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MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.95e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.63e-2

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.533e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.46e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1660
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.47e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

DP
type: SiteQuality
SIO_000300: 6.71272e5

QD
type: SiteQuality
SIO_000300: 1.349e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.655e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.65e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 26

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 9.491268033409264e-5
allele num: 10536
num of homozygotes: 0

African
type: Population
allele count: 21
allele frequency: 8.460918614020952e-3
allele num: 2482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7526
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.01e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.95818e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.16e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 1.458e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 2504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 930
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10706
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.316829075585989e-4
allele num: 7594
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.662e1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.82e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1694
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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MQ
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: 1.54e0

ReadPosRankSum
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QD
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SIO_000300: 8.68e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 11062
num of homozygotes: 0

Latino
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Other
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InbreedingCoeff
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MQ
type: SiteQuality
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MQRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Latino
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allele frequency: 0.0e0
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South Asian
type: Population
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.53887e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.018e1

MQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.11e-2

FS
type: SiteQuality
SIO_000300: 3.522e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

GenotypeQuality
all individuals: 69
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 9.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7772
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1026
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1710
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.56381e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.208e1

VQSLOD
type: SiteQuality
SIO_000300: -4.826e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.07e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 232
bin: 8.25e1
variant carriers: 2

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 20756
bin: 7.5e0
variant carriers: 3

GenotypeQuality
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bin: 1.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 4

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 5940
bin: 6.25e1
variant carriers: 2

GenotypeQuality
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bin: 2.25e1
variant carriers: 2

GenotypeQuality
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bin: 6.75e1
variant carriers: 3

GenotypeQuality
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bin: 9.25e1
variant carriers: 2

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3490
bin: 9.75e1
variant carriers: 75

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 367
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 352
bin: 7.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 2
allele frequency: 1.16144018583043e-3
allele num: 1722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1058
num of homozygotes: 0

African
type: Population
allele count: 26
allele frequency: 9.658246656760773e-3
allele num: 2692
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 5.10073960724305e-4
allele num: 7842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 36
allele frequency: 3.10719834282755e-3
allele num: 11586
num of homozygotes: 1

Latino
type: Population
allele count: 4
allele frequency: 6.622516556291391e-3
allele num: 604
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 7.352941176470588e-3
allele num: 272
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.27e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.596e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.77197e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.44e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 3434
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 271
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12200
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.25e-4
allele num: 8000
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1746
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.06968e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-2

FS
type: SiteQuality
SIO_000300: 2.509e0

VQSLOD
type: SiteQuality
SIO_000300: -4.817e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.477e1

GenotypeQuality
all individuals: 486
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 231
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GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 278
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variant carriers: 0

GenotypeQuality
all individuals: 389
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variant carriers: 0

GenotypeQuality
all individuals: 38
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GenotypeQuality
all individuals: 107
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GenotypeQuality
all individuals: 2256
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variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6863
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variant carriers: 1

GenotypeQuality
all individuals: 1037
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 274
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3436
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 219
bin: 9.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 3.148614609571788e-4
allele num: 12704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1764
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8064
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.86e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

QD
type: SiteQuality
SIO_000300: 8.23e0

VQSLOD
type: SiteQuality
SIO_000300: -5.222e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.36e-1

DP
type: SiteQuality
SIO_000300: 8.22091e5

GenotypeQuality
all individuals: 2108
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14002
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GenotypeQuality
all individuals: 3433
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variant carriers: 1

GenotypeQuality
all individuals: 791
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variant carriers: 0

GenotypeQuality
all individuals: 109
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 412
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GenotypeQuality
all individuals: 139
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GenotypeQuality
all individuals: 113
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GenotypeQuality
all individuals: 28558
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GenotypeQuality
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GenotypeQuality
all individuals: 360
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variant carriers: 0

GenotypeQuality
all individuals: 7153
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8166
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13340
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1830
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.352e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.763e1

VQSLOD
type: SiteQuality
SIO_000300: -1.293e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 8.37927e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-2

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
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variant carriers: 3

GenotypeQuality
all individuals: 56
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GenotypeQuality
all individuals: 94
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GenotypeQuality
all individuals: 987
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 34

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 358
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variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 1

Latino
type: Population
allele count: 2
allele frequency: 2.247191011235955e-3
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1854
num of homozygotes: 0

African
type: Population
allele count: 31
allele frequency: 9.828788839568801e-3
allele num: 3154
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1660
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 5.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.454e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

DP
type: SiteQuality
SIO_000300: 8.41549e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
all individuals: 3430
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 975
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 292
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GenotypeQuality
all individuals: 56
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GenotypeQuality
all individuals: 139
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GenotypeQuality
all individuals: 233
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GenotypeQuality
all individuals: 357
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1874
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.952380952380953e-4
allele num: 1680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13724
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.595e1

VQSLOD
type: SiteQuality
SIO_000300: 8.699999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.74e-2

DP
type: SiteQuality
SIO_000300: 8.36591e5

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1832
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
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variant carriers: 0

GenotypeQuality
all individuals: 273
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GenotypeQuality
all individuals: 27339
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6935
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GenotypeQuality
all individuals: 797
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GenotypeQuality
all individuals: 57
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GenotypeQuality
all individuals: 956
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GenotypeQuality
all individuals: 73
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GenotypeQuality
all individuals: 105
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GenotypeQuality
all individuals: 48
bin: 4.25e1
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GenotypeQuality
all individuals: 231
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GenotypeQuality
all individuals: 356
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GenotypeQuality
all individuals: 219
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GenotypeQuality
all individuals: 3429
bin: 9.75e1
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GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1672
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.119151590767311e-4
allele num: 3206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 13778
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1878
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.71e-1

MQRankSum
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SIO_000300: -5.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.84e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

BaseQRankSum
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SIO_000300: -5.46e-1

QD
type: SiteQuality
SIO_000300: 1.452e1

DP
type: SiteQuality
SIO_000300: 8.32597e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.084598698481562e-3
allele num: 922
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1872
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3174
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 13786
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.95e-2

BaseQRankSum
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SIO_000300: 1.03e-1

FS
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 1.03e-1

MQRankSum
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SIO_000300: 1.03e-1

ReadPosRankSum
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

VQSLOD
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SIO_000300: -1.211e0

QD
type: SiteQuality
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DP
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SIO_000300: 8.27004e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1622
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3142
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1852
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 7.319572536963841e-5
allele num: 13662
num of homozygotes: 0

Other
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allele count: 0
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BaseQRankSum
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SIO_000300: -1.294e0

QD
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SIO_000300: 1.32e1

FS
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SIO_000300: 2.835e0

MQRankSum
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SIO_000300: -1.21e-1

ReadPosRankSum
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InbreedingCoeff
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SIO_000300: -3.24e-2

MQ
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SIO_000300: 5.993e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.533e0

VQSLOD
type: SiteQuality
SIO_000300: 5.38e-1

DP
type: SiteQuality
SIO_000300: 8.1565e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1534
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 13364
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3068
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.74e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -7.31e-1

DP
type: SiteQuality
SIO_000300: 7.97477e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.37e-1

QD
type: SiteQuality
SIO_000300: 1.326e1

MQRankSum
type: SiteQuality
SIO_000300: -3.55e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1840
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 5
allele frequency: 3.328894806924101e-3
allele num: 1502
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 13282
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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ReadPosRankSum
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DP
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SIO_000300: 7.95417e5

MQRankSum
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VQSLOD
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FS
type: SiteQuality
SIO_000300: 7.851e0

QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -3.79e-2

GenotypeDepth
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 1830
num of homozygotes: 0

Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 7.544892108042855e-5
allele num: 13254
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 2.450980392156863e-4
allele num: 8160
num of homozygotes: 0

InbreedingCoeff
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QD
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MQ
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
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Other
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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Latino
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South Asian
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ClippingRankSum
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ReadPosRankSum
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FS
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BaseQRankSum
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DP
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MQ
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MQRankSum
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InbreedingCoeff
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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European (Finnish)
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Other
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European (Non-Finnish)
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allele num: 13136
num of homozygotes: 0

Latino
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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FS
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QD
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BaseQRankSum
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VQSLOD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8090
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 7.724393635099645e-5
allele num: 12946
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1812
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.33e-2

ClippingRankSum
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SIO_000300: 1.04e0

FS
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VQSLOD
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

MQRankSum
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DP
type: SiteQuality
SIO_000300: 7.71274e5

QD
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SIO_000300: 1.686e1

BaseQRankSum
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SIO_000300: 1.57e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 2918
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 12726
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 768
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Other
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allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.247193813918683e-4
allele num: 8018
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1806
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.56049e5

MQ
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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FS
type: SiteQuality
SIO_000300: 1.988e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 1794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 7.985944737262418e-5
allele num: 12522
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1340
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 1.251564455569462e-4
allele num: 7990
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.48e0

ClippingRankSum
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SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -4.91e-2

MQ
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FS
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BaseQRankSum
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SIO_000300: -6.33e-1

VQSLOD
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SIO_000300: -1.299e0

ReadPosRankSum
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DP
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MQRankSum
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SIO_000300: -9.370000000000001e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 2556
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1672
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 9.069472156720479e-5
allele num: 11026
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: -2.34e-1

DP
type: SiteQuality
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BaseQRankSum
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SIO_000300: -6.840000000000001e-1

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 3.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele num: 260
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7658
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.67362e5

VQSLOD
type: SiteQuality
SIO_000300: 2.02e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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num of homozygotes: 0

QD
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MQRankSum
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQ
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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South Asian
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DP
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BaseQRankSum
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FS
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MQ
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ClippingRankSum
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QD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

East Asian
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Latino
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European (Finnish)
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South Asian
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Other
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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QD
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DP
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FS
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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South Asian
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allele frequency: 1.5625e-4
allele num: 6400
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2382
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.47e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

QD
type: SiteQuality
SIO_000300: 9.35e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.81e-1

DP
type: SiteQuality
SIO_000300: 7.25297e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.303e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 9.696186166774402e-4
allele num: 3094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23660
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

QD
type: SiteQuality
SIO_000300: 1.646e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.08e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.78e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.034e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.44e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

DP
type: SiteQuality
SIO_000300: 7.32601e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 4.180602006688963e-4
allele num: 2392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

African
type: Population
allele count: 44
allele frequency: 8.435582822085889e-3
allele num: 5216
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.218697266284171e-5
allele num: 23704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3112
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-2

QD
type: SiteQuality
SIO_000300: 1.453e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.35637e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.591e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.477104874446086e-4
allele num: 6770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3154
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.22e-2

DP
type: SiteQuality
SIO_000300: 7.62747e5

QD
type: SiteQuality
SIO_000300: 8.99e0

VQSLOD
type: SiteQuality
SIO_000300: -1.676e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.35e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2314
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 4.161622276029056e-4
allele num: 26432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 6.016847172081829e-4
allele num: 3324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.71e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.35e0

MQRankSum
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SIO_000300: -1.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 8.45079e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3348
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 3.756009615384616e-5
allele num: 26624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8254
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-3

FS
type: SiteQuality
SIO_000300: 6.74e-1

BaseQRankSum
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MQ
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SIO_000300: 5.922e1

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.003e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

DP
type: SiteQuality
SIO_000300: 8.49112e5

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3000
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4192
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 3.675119441381845e-5
allele num: 27210
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 454
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3392
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

ClippingRankSum
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VQSLOD
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QD
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BaseQRankSum
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FS
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
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SIO_000300: 8.66842e5

MQRankSum
type: SiteQuality
SIO_000300: 7.33e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28792
num of homozygotes: 0

East Asian
type: Population
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Other
type: Population
allele count: 0
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allele num: 476
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African
type: Population
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allele frequency: 1.693766937669377e-4
allele num: 5904
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele num: 3500
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Latino
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.764e0

InbreedingCoeff
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ReadPosRankSum
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DP
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MQ
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VQSLOD
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ClippingRankSum
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QD
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BaseQRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 14588
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28792
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

FS
type: SiteQuality
SIO_000300: 3.764e0

DP
type: SiteQuality
SIO_000300: 9.10475e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.536e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

GenotypeQuality
all individuals: 1144
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3290
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.488696622941669e-5
allele num: 28664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.249e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

VQSLOD
type: SiteQuality
SIO_000300: -1.084e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.22e-1

DP
type: SiteQuality
SIO_000300: 9.08539e5

GenotypeQuality
all individuals: 1260
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.495037047392702e-5
allele num: 28612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.04379e5

QD
type: SiteQuality
SIO_000300: 1.312e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

FS
type: SiteQuality
SIO_000300: 3.026e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13564
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4326
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.029230135858378e-4
allele num: 9716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5812
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28292
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.271e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.333e0

QD
type: SiteQuality
SIO_000300: 3.28e0

DP
type: SiteQuality
SIO_000300: 8.95605e5

MQRankSum
type: SiteQuality
SIO_000300: 4.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.69e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.793e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 9679
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2652
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2251
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5186
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 1.078167115902965e-3
allele num: 3710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3086
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25280
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.21e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.19e-1

FS
type: SiteQuality
SIO_000300: 5.201e0

DP
type: SiteQuality
SIO_000300: 8.27637e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQRankSum
type: SiteQuality
SIO_000300: -6.65e-1

QD
type: SiteQuality
SIO_000300: 1.25e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5014
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3010
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.117598616486865e-5
allele num: 24286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3522
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.45e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.11e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.1384e5

VQSLOD
type: SiteQuality
SIO_000300: -2.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.57e-1

QD
type: SiteQuality
SIO_000300: 3.72e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.233451196447661e-4
allele num: 24322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3014
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3522
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.1371e5

FS
type: SiteQuality
SIO_000300: 2.675e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.44e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 9.199999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.209242618741977e-4
allele num: 3116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.81e0

VQSLOD
type: SiteQuality
SIO_000300: 4.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

DP
type: SiteQuality
SIO_000300: 7.8401e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.73e-2

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 171
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1268
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GenotypeQuality
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GenotypeQuality
all individuals: 8730
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GenotypeQuality
all individuals: 180
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2503
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 496
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29990
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.572473708276177e-5
allele num: 21870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3006
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1968
num of homozygotes: 0