1-155208474-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155208474
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155208474
    reference: chr 1
allele count: 1
allele frequency: 8.29393713195654e-6
allele num: 120570
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.308-33G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-33G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000491081
  gene symbol: GBA
  hgvsc: ENST00000491081.1:n.27G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.455-33G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000460156
  gene symbol: GBA
  hgvsc: ENST00000460156.1:n.209G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.793-33G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.776-33G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+1290G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.455-33G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.78-33G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.194-33G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3778
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

1-155208475-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155208475
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155208475
    reference: chr 1
allele count: 8
allele frequency: 6.653027959349999e-5
allele num: 120246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000491081
  gene symbol: GBA
  hgvsc: ENST00000491081.1:n.26C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.194-34C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.793-34C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000460156
  gene symbol: GBA
  hgvsc: ENST00000460156.1:n.208C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.308-34C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-34C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.776-34C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+1289C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.455-34C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.78-34C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.455-34C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31938
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3540
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

1-155208478-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155208478
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155208478
    reference: chr 1
allele count: 1
allele frequency: 8.30675172780436e-6
allele num: 120384
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.455-37A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.78-37A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.776-37A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.194-37A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.455-37A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-37A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+1286A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.793-37A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000491081
  gene symbol: GBA
  hgvsc: ENST00000491081.1:n.23A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000460156
  gene symbol: GBA
  hgvsc: ENST00000460156.1:n.205A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.308-37A>G
  variant of: http://identifiers.org/hgnc/4177
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3473
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

1-155208481-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155208481
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155208481
    reference: chr 1
allele count: 1
allele frequency: 8.339727124128499e-6
allele num: 119908
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.455-40T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000460156
  gene symbol: GBA
  hgvsc: ENST00000460156.1:n.202T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000491081
  gene symbol: GBA
  hgvsc: ENST00000491081.1:n.20T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.455-40T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.776-40T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-40T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+1283T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.78-40T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.308-40T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.194-40T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.793-40T>A
  variant of: http://identifiers.org/hgnc/4177
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

1-155208492-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155208492
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155208492
    reference: chr 1
allele count: 1
allele frequency: 8.400961069946402e-6
allele num: 119034
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000491081
  gene symbol: GBA
  hgvsc: ENST00000491081.1:n.9A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.776-51A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+1272A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.78-51A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.455-51A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.793-51A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.308-51A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-51A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000460156
  gene symbol: GBA
  hgvsc: ENST00000460156.1:n.191A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.194-51A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.455-51A>G
  variant of: http://identifiers.org/hgnc/4177
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4503
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7781
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12984
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

1-155209360-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209360
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209360
    reference: chr 1
allele count: 43060
allele frequency: 3.663184401265866e-1
allele num: 117548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+404G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+317G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.454+47G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.193+47G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+317G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.454+47G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.792+47G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.775+47G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-919G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 2966
  bin: 3.75e1
  variant carriers: 1913
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 189
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 1.25e1
  variant carriers: 2421
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.75e1
  variant carriers: 352
genotype depth: GenotypeDepth
  all individuals: 5891
  bin: 3.25e1
  variant carriers: 3656
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 166
genotype depth: GenotypeDepth
  all individuals: 4786
  bin: 9.75e1
  variant carriers: 3087
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 8.75e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.25e1
  variant carriers: 134
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 14871
  bin: 2.25e1
  variant carriers: 7745
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.25e1
  variant carriers: 399
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 4.25e1
  variant carriers: 1001
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 227
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 7.5e0
  variant carriers: 501
genotype depth: GenotypeDepth
  all individuals: 9325
  bin: 1.75e1
  variant carriers: 5808
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.75e1
  variant carriers: 6321
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.25e1
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 4.75e1
  variant carriers: 655
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 8.25e1
  variant carriers: 649
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 9.25e1
  variant carriers: 501
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 7.75e1
  variant carriers: 742
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 1.75e1
  variant carriers: 133
genotype quality: GenotypeQuality
  all individuals: 32954
  bin: 9.75e1
  variant carriers: 27615
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 4.25e1
  variant carriers: 259
num of homozygotes: 8755
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-155209361-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209361
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209361
    reference: chr 1
allele count: 3
allele frequency: 2.524997475002525e-5
allele num: 118812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.193+46C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-920C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+403C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.792+46C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+316C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.775+46C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.454+46C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.454+46C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+316C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15236
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7812
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1624
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2192
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6104
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

1-155209362-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209362
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209362
    reference: chr 1
allele count: 3
allele frequency: 2.519610972065913e-5
allele num: 119066
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.193+45T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+402T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.454+45T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.454+45T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.792+45T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+315T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-921T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.775+45T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+315T>C
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16025
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11018
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6983
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2272
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6341
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3485
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/1-155209370-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209370
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209370
    reference: chr 1
allele count: 4
allele frequency: 3.350701134212334e-5
allele num: 119378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+307G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.454+37G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.454+37G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+307G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+394G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.792+37G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.775+37G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.193+37G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-929G>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21435
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3298
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4478
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6960
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-155209372-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209372
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209372
    reference: chr 1
allele count: 34
allele frequency: 2.842714290491957e-4
allele num: 119604
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.775+35T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-931T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+305T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.454+35T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.792+35T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+305T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.454+35T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+392T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.193+35T>C
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11940
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7142
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22366
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

1-155209378-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209378
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209378
    reference: chr 1
allele count: 3
allele frequency: 2.499791684026331e-5
allele num: 120010
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.792+29G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+299G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.454+29G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+386G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.193+29G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.775+29G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+299G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.454+29G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-937G>C
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23346
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7325
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

1-155209378-CTA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209378
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209376
    reference: chr 1
allele count: 1
allele frequency: 8.332638946754437e-6
allele num: 120010
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-939_116-938delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.193+27_193+28delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+384_339+385delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.454+27_454+28delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.454+27_454+28delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+297_77+298delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+297_307+298delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.792+27_792+28delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.775+27_775+28delTA
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12410
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19901
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: CTA
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-155209380-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209380
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209380
    reference: chr 1
allele count: 1
allele frequency: 8.318637074501714e-6
allele num: 120212
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-939T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.193+27T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+384T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.454+27T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.775+27T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.792+27T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+297T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.454+27T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+297T>C
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum

1-155209385-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209385
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209385
    reference: chr 1
allele count: 2
allele frequency: 1.660384877214538e-5
allele num: 120454
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+379T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.454+22T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.454+22T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-944T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+292T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.193+22T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.775+22T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+292T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.792+22T>C
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum

1-155209389-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209389
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209389
    reference: chr 1
allele count: 1
allele frequency: 8.290361625574107e-6
allele num: 120622
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+288A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.454+18A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.775+18A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+375A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+288A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.454+18A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.792+18A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.193+18A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-948A>G
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1747
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

1-155209406-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209406
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209406
    reference: chr 1
allele count: 1
allele frequency: 8.264462809917356e-6
allele num: 121000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.775+1G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.454+1G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.454+1G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.193+1G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+271G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.792+1G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+358G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-965G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+271G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5091
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7738
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2498
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: c.454+1G>A
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

1-155209407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209407
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209407
    reference: chr 1
allele count: 1
allele frequency: 8.26405302216419e-6
allele num: 121006
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.454G>A
  hgvsp: ENSP00000314508.5:p.Gly152Arg
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.792G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+357G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-966G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.193G>A
  hgvsp: ENSP00000397986.2:p.Gly65Arg
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.454G>A
  hgvsp: ENSP00000357357.3:p.Gly152Arg
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+270G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.775G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+270G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7740
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5092
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3728
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly152Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

1-155209414-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209414
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209414
    reference: chr 1
allele count: 1
allele frequency: 8.257638315441784e-6
allele num: 121100
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.785T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.186T>C
  hgvsp: ENST00000428024.3:c.186T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.447T>C
  hgvsp: ENST00000327247.5:c.447T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+350T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.768T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+263T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.447T>C
  hgvsp: ENST00000368373.3:c.447T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-973T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+263T>C
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1796
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2508
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser149Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP

1-155209424-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209424
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209424
    reference: chr 1
allele count: 7
allele frequency: 5.774529375855868e-5
allele num: 121222
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.176C>T
  hgvsp: ENSP00000397986.2:p.Ser59Leu
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+253C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.437C>T
  hgvsp: ENSP00000357357.3:p.Ser146Leu
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+253C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.437C>T
  hgvsp: ENSP00000314508.5:p.Ser146Leu
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+340C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.758C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.775C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.116-983C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13751
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14501
  bin: 9.75e1
  variant carriers: 7
hgvs: p.Ser146Leu
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

1-155209434-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209434
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209434
    reference: chr 1
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.617C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.765C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+330C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+243C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.427C>T
  hgvsp: ENST00000368373.3:c.427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+243C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.166C>T
  hgvsp: ENST00000428024.3:c.166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.748C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.427C>T
  hgvsp: ENST00000327247.5:c.427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+987C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3651
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu143Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP

1-155209439-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209439
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209439
    reference: chr 1
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.612A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+238A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.743A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+325A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+238A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.422A>G
  hgvsp: ENSP00000357357.3:p.Asn141Ser
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+982A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.760A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.161A>G
  hgvsp: ENSP00000397986.2:p.Asn54Ser
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.422A>G
  hgvsp: ENSP00000314508.5:p.Asn141Ser
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3798
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn141Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

1-155209448-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209448
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209448
    reference: chr 1
allele count: 2
allele frequency: 1.648505629646725e-5
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.734C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+229C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+316C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+973C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.603C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.152C>A
  hgvsp: ENSP00000397986.2:p.Pro51His
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.413C>A
  hgvsp: ENSP00000314508.5:p.Pro138His
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.413C>A
  hgvsp: ENSP00000357357.3:p.Pro138His
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+229C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.751C>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7910
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4118
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro138His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-155209449-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209449
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209449
    reference: chr 1
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.151C>G
  hgvsp: ENSP00000397986.2:p.Pro51Ala
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.602C>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+228C>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+972C>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.412C>G
  hgvsp: ENSP00000357357.3:p.Pro138Ala
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.733C>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+315C>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.412C>G
  hgvsp: ENSP00000314508.5:p.Pro138Ala
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+228C>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.750C>G
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14011
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3811
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro138Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

1-155209471-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209471
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209471
    reference: chr 1
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.580C>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.711C>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+293C>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.390C>G
  hgvsp: ENST00000327247.5:c.390C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.390C>G
  hgvsp: ENST00000368373.3:c.390C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.728C>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+950C>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.129C>G
  hgvsp: ENST00000428024.3:c.129C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+206C>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+206C>G
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2549
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu130Leu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-155209474-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209474
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209474
    reference: chr 1
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+203T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.387T>A
  hgvsp: ENST00000327247.5:c.387T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.577T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.126T>A
  hgvsp: ENST00000428024.3:c.126T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+290T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+203T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.387T>A
  hgvsp: ENST00000368373.3:c.387T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.725T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.708T>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+947T>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala129Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ

1-155209478-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209478
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209478
    reference: chr 1
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.573C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.122C>T
  hgvsp: ENSP00000397986.2:p.Ala41Val
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+199C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+199C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.383C>T
  hgvsp: ENSP00000357357.3:p.Ala128Val
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+286C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+943C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.383C>T
  hgvsp: ENSP00000314508.5:p.Ala128Val
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.721C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.704C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2552
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala128Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/1-155209490-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209490
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209490
    reference: chr 1
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+274T>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+187T>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+931T>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.110T>G
  hgvsp: ENSP00000397986.2:p.Met37Arg
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.371T>G
  hgvsp: ENSP00000357357.3:p.Met124Arg
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.561T>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+187T>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.692T>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.371T>G
  hgvsp: ENSP00000314508.5:p.Met124Arg
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.709T>G
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1841
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Met124Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

1-155209491-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209491
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209491
    reference: chr 1
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.370A>G
  hgvsp: ENSP00000314508.5:p.Met124Val
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+186A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.708A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.370A>G
  hgvsp: ENSP00000357357.3:p.Met124Val
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.109A>G
  hgvsp: ENSP00000397986.2:p.Met37Val
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+930A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+273A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.691A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+186A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.560A>G
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Met124Val
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

1-155209530-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209530
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209529
    reference: chr 1
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+890delA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.520delA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+146delA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.330delA
  hgvsp: ENSP00000357357.3:p.Glu111AsnfsTer7
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.330delA
  hgvsp: ENSP00000314508.5:p.Glu111AsnfsTer7
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.69delA
  hgvsp: ENSP00000397986.2:p.Glu24AsnfsTer7
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+233delA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.668delA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+146delA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.651delA
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20452
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu111AsnfsTer7
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: CT
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

1-155209537-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209537
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209537
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.324G>A
  hgvsp: ENST00000327247.5:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+227G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+140G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+884G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.63G>A
  hgvsp: ENST00000428024.3:c.63G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.324G>A
  hgvsp: ENST00000368373.3:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.645G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.662G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+140G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.514G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8006
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu108Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-155209539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209539
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209539
    reference: chr 1
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.512C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+138C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.660C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.322C>T
  hgvsp: ENST00000368373.3:c.322C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.322C>T
  hgvsp: ENST00000327247.5:c.322C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.61C>T
  hgvsp: ENST00000428024.3:c.61C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.643C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+138C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+882C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+225C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu108Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-155209543-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209543
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209543
    reference: chr 1
allele count: 2
allele frequency: 1.647527884409444e-5
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+134G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+878G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.508G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.639G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+134G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.318G>T
  hgvsp: ENST00000327247.5:c.318G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.57G>T
  hgvsp: ENST00000428024.3:c.57G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.318G>T
  hgvsp: ENST00000368373.3:c.318G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+221G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.656G>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8824
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu106Leu
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

1-155209549-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209549
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209549
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+215G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+128G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+872G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+128G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.502G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.633G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.312G>C
  hgvsp: ENST00000327247.5:c.312G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.312G>C
  hgvsp: ENST00000368373.3:c.312G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.650G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.51G>C
  hgvsp: ENST00000428024.3:c.51G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14527
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu104Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

1-155209553-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209553
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209553
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.308G>A
  hgvsp: ENSP00000314508.5:p.Gly103Asp
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.47G>A
  hgvsp: ENSP00000397986.2:p.Gly16Asp
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+124G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+124G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.629G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.498G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.308G>A
  hgvsp: ENSP00000357357.3:p.Gly103Asp
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.646G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+211G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+868G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8004
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly103Asp
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

1-155209558-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209558
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209558
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.646-5C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+119C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.629-5C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.308-5C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+119C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.498-5C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.47-5C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+206C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+863C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.308-5C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 8.75e1
  variant carriers: 0
hgvs: c.308-5C>T
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS

http://identifiers.org/exac.variant/1-155209564-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209564
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209564
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.646-11G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.498-11G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.47-11G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+857G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+200G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+113G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.308-11G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+113G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.308-11G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.629-11G>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8839
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20354
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2559
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

1-155209566-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209566
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209566
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+111T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.646-13T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.308-13T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.308-13T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+855T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+198T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.47-13T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+111T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.498-13T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.629-13T>C
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2558
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3858
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5275
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

1-155209568-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209568
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209567
    reference: chr 1
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+108delC
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+195delC
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.308-16delC
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+108delC
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.308-16delC
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+852delC
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.629-16delC
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.47-16delC
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.498-16delC
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.646-16delC
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8848
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5274
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20291
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: AG
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-155209579-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209579
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209579
    reference: chr 1
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+842C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.498-26C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+98C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+185C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.646-26C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.629-26C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.47-26C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.308-26C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.308-26C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+98C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7988
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS

1-155209579-GTA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209579
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209577
    reference: chr 1
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.498-28_498-27delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.47-28_47-27delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.308-28_308-27delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+96_77+97delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+183_339+184delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.629-28_629-27delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+840_115+841delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.646-28_646-27delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.308-28_308-27delTA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+96_307+97delTA
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21951
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14532
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: GTA
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

1-155209582-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209582
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209582
    reference: chr 1
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.308-29A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+839A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+182A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+95A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.629-29A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.646-29A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.308-29A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+95A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.498-29A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.47-29A>G
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4151
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

1-155209594-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209594
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209594
    reference: chr 1
allele count: 7
allele frequency: 5.768438401318501e-5
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.308-41C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.308-41C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+170C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.629-41C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.646-41C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.498-41C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+827C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+83C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+83C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.47-41C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14175
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19637
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

1-155209597-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209597
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209597
    reference: chr 1
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.498-44T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+80T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+80T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+824T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.308-44T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.629-44T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+167T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.308-44T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.646-44T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.47-44T>C
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5306
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

1-155209604-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209604
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209604
    reference: chr 1
allele count: 2
allele frequency: 1.647853670594051e-5
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+73T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+817T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+73T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+160T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.498-51T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.47-51T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.308-51T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.629-51T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.308-51T>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.646-51T>C
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

1-155209604-ATGGTGATCAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209604
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209594
    reference: chr 1
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14307
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18680
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2573
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: ATGGTGATCAC
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

1-155209628-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209628
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209628
    reference: chr 1
allele count: 2
allele frequency: 1.651636772041093e-5
allele num: 121092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+49G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+136G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.645+49G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.46+49G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+793G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.497+49G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+49G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.628+49G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.307+49G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.307+49G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP

1-155209629-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209629
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209629
    reference: chr 1
allele count: 1
allele frequency: 8.255320554097116e-6
allele num: 121134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+48A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.307+48A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.645+48A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.307+48A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.628+48A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.46+48A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+48A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+792A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+135A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.497+48A>G
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10516
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31452
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

1-155209634-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209634
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209634
    reference: chr 1
allele count: 2
allele frequency: 1.65196418541646e-5
allele num: 121068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.628+43C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+787C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+43C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.307+43C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.645+43C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.497+43C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+43C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.46+43C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.307+43C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+130C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3472
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

1-155209639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209639
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209639
    reference: chr 1
allele count: 2
allele frequency: 1.653302471687195e-5
allele num: 120970
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.46+38G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+38G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.628+38G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.307+38G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.307+38G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.645+38G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+38G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.497+38G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+782G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+125G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12559
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25873
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3460
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9605
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-155209644-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209644
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209644
    reference: chr 1
allele count: 1
allele frequency: 8.264462809917356e-6
allele num: 121000
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.497+33G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+33G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+777G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.46+33G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+33G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.628+33G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.307+33G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.307+33G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.645+33G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+120G>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12269
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9543
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

1-155209645-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209645
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209645
    reference: chr 1
allele count: 1
allele frequency: 8.263643275047103e-6
allele num: 121012
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.307+32G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.645+32G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+776G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.628+32G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+119G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+32G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+32G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.46+32G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.497+32G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.307+32G>C
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11488
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

1-155209645-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209645
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209645
    reference: chr 1
allele count: 1
allele frequency: 8.263643275047103e-6
allele num: 121012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+119G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+776G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.46+32G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.645+32G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.497+32G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.628+32G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.307+32G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.307+32G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+32G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+32G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3279
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-155209649-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209649
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209649
    reference: chr 1
allele count: 7
allele frequency: 5.785984691937644e-5
allele num: 120982
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.307+28G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+28G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+115G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.307+28G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.645+28G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+28G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.497+28G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.46+28G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.628+28G>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+772G>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9453
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-155209649-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209649
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209649
    reference: chr 1
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+115G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+772G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.307+28G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.307+28G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.46+28G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.628+28G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.645+28G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+28G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+28G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.497+28G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12083
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9453
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

1-155209663-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209663
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209663
    reference: chr 1
allele count: 1
allele frequency: 8.264736024331383e-6
allele num: 120996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.628+14C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.645+14C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.46+14C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+14C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+758C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.307+14C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+101C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.307+14C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+14C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.497+14C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11792
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2189
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

1-155209666-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209666
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209666
    reference: chr 1
allele count: 2
allele frequency: 1.65264671371201e-5
allele num: 121018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.46+11C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.307+11C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.307+11C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+755C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.497+11C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+98C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.307+11C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.628+11C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.77+11C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.645+11C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13193
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25892
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

1-155209681-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209681
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209681
    reference: chr 1
allele count: 1
allele frequency: 8.260639703938672e-6
allele num: 121056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.303C>A
  hgvsp: ENST00000427500.3:c.303C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.42C>A
  hgvsp: ENST00000428024.3:c.42C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.73C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.303C>A
  hgvsp: ENST00000368373.3:c.303C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.624C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.303C>A
  hgvsp: ENST00000327247.5:c.303C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+740C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.493C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.641C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+83C>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly101Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

1-155209684-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209684
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209684
    reference: chr 1
allele count: 3
allele frequency: 2.478396642598681e-5
allele num: 121046
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.490G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.300G>C
  hgvsp: ENST00000368373.3:c.300G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.300G>C
  hgvsp: ENST00000427500.3:c.300G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.300G>C
  hgvsp: ENST00000327247.5:c.300G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+80G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+737G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.621G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.39G>C
  hgvsp: ENST00000428024.3:c.39G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.638G>C
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.70G>C
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13821
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26172
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr100Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

1-155209685-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209685
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209685
    reference: chr 1
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+736C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.299C>T
  hgvsp: ENSP00000357357.3:p.Thr100Met
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.620C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.299C>T
  hgvsp: ENSP00000402577.2:p.Thr100Met
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.38C>T
  hgvsp: ENSP00000397986.2:p.Thr13Met
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.489C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.299C>T
  hgvsp: ENSP00000314508.5:p.Thr100Met
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+79C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.69C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.637C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13852
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9393
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr100Met
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

1-155209689-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209689
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209689
    reference: chr 1
allele count: 1
allele frequency: 8.258047467256841e-6
allele num: 121094
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.295C>A
  hgvsp: ENSP00000402577.2:p.His99Asn
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.295C>A
  hgvsp: ENSP00000314508.5:p.His99Asn
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.616C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.34C>A
  hgvsp: ENSP00000397986.2:p.His12Asn
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+75C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+732C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.485C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.65C>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.295C>A
  hgvsp: ENSP00000357357.3:p.His99Asn
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.633C>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11576
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9391
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His99Asn
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-155209701-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209701
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209701
    reference: chr 1
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.283A>G
  hgvsp: ENSP00000357357.3:p.Ile95Val
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+720A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.621A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.283A>G
  hgvsp: ENSP00000402577.2:p.Ile95Val
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.283A>G
  hgvsp: ENSP00000314508.5:p.Ile95Val
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.53A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.22A>G
  hgvsp: ENSP00000397986.2:p.Ile8Val
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.473A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+63A>G
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.604A>G
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile95Val
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

1-155209714-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209714
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209714
    reference: chr 1
allele count: 1
allele frequency: 8.254911672445104e-6
allele num: 121140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+707G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.608G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.9G>A
  hgvsp: ENST00000428024.3:c.9G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.270G>A
  hgvsp: ENST00000427500.3:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.270G>A
  hgvsp: ENST00000327247.5:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.270G>A
  hgvsp: ENST00000368373.3:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.40G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+50G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.591G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.460G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu90Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-155209717-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209717
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209717
    reference: chr 1
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.267G>A
  hgvsp: ENST00000327247.5:c.267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.267G>A
  hgvsp: ENST00000427500.3:c.267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.6G>A
  hgvsp: ENST00000428024.3:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+47G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.457G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.267G>A
  hgvsp: ENST00000368373.3:c.267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.588G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.37G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.605G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+704G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3787
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu89Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

1-155209720-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209720
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209720
    reference: chr 1
allele count: 5
allele frequency: 4.127183279955096e-5
allele num: 121148
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.454G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.264G>A
  hgvsp: ENSP00000314508.5:p.Met88Ile
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.34G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.264G>A
  hgvsp: ENSP00000357357.3:p.Met88Ile
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.264G>A
  hgvsp: ENSP00000402577.2:p.Met88Ile
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.585G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+44G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.602G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.3G>A
  hgvsp: ENSP00000397986.2:p.Met1?
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+701G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11563
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3048
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9279
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-155209725-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209725
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209725
    reference: chr 1
allele count: 2
allele frequency: 1.651254953764861e-5
allele num: 121120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.259C>T
  hgvsp: ENSP00000402577.2:p.Arg87Trp
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+39C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.449C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.597C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.259C>T
  hgvsp: ENSP00000357357.3:p.Arg87Trp
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.-3C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.29C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.580C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.259C>T
  hgvsp: ENSP00000314508.5:p.Arg87Trp
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+696C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11565
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26775
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg87Trp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

1-155209727-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209727
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209727
    reference: chr 1
allele count: 23
allele frequency: 1.898566994650994e-4
allele num: 121144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.257G>A
  hgvsp: ENSP00000357357.3:p.Arg86Gln
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.447G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+37G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.-5G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.257G>A
  hgvsp: ENSP00000314508.5:p.Arg86Gln
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.595G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.257G>A
  hgvsp: ENSP00000402577.2:p.Arg86Gln
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.27G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+694G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.578G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11540
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26780
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3130
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg86Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-155209730-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209730
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209730
    reference: chr 1
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.-8G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+34G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.24G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.254G>A
  hgvsp: ENSP00000357357.3:p.Gly85Glu
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.254G>A
  hgvsp: ENSP00000402577.2:p.Gly85Glu
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.254G>A
  hgvsp: ENSP00000314508.5:p.Gly85Glu
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.592G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+691G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.444G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.575G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly85Glu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

1-155209736-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209736
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209736
    reference: chr 1
allele count: 2
allele frequency: 1.650955077512341e-5
allele num: 121142
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.248G>A
  hgvsp: ENSP00000402577.2:p.Arg83His
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.569G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.18G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.248G>A
  hgvsp: ENSP00000314508.5:p.Arg83His
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.438G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+28G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.-14G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.586G>A
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.248G>A
  hgvsp: ENSP00000357357.3:p.Arg83His
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+685G>A
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3787
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9220
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2988
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg83His
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

1-155209737-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155209737
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155209737
    reference: chr 1
allele count: 5
allele frequency: 4.127592127856294e-5
allele num: 121136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000473570
  gene symbol: GBA
  hgvsc: ENST00000473570.1:n.568C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000484489
  gene symbol: GBA
  hgvsc: ENST00000484489.1:n.339+27C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000314508
  ensembl transcript: ENST00000327247
  gene symbol: GBA
  hgvsc: ENST00000327247.5:c.247C>T
  hgvsp: ENSP00000314508.5:p.Arg83Cys
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000357357
  ensembl transcript: ENST00000368373
  gene symbol: GBA
  hgvsc: ENST00000368373.3:c.247C>T
  hgvsp: ENSP00000357357.3:p.Arg83Cys
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000402577
  ensembl transcript: ENST00000427500
  gene symbol: GBA
  hgvsc: ENST00000427500.3:c.247C>T
  hgvsp: ENSP00000402577.2:p.Arg83Cys
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000397986
  ensembl transcript: ENST00000428024
  gene symbol: GBA
  hgvsc: ENST00000428024.3:c.-15C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000493842
  gene symbol: GBA
  hgvsc: ENST00000493842.1:n.585C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000497670
  gene symbol: GBA
  hgvsc: ENST00000497670.1:n.17C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000177628
  ensembl transcript: ENST00000467918
  gene symbol: GBA
  hgvsc: ENST00000467918.1:n.437C>T
  variant of: http://identifiers.org/hgnc/4177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000177628
  ensembl protein: ENSP00000445560
  ensembl transcript: ENST00000536770
  gene symbol: GBA
  hgvsc: ENST00000536770.1:c.115+684C>T
  variant of: http://identifiers.org/hgnc/4177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1914
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9215
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg83Cys
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 38415
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1586
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3473
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1313
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5315
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2765
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2063
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507477086348288e-5
allele num: 66336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.595e0

QD
type: SiteQuality
SIO_000300: 6.55e0

VQSLOD
type: SiteQuality
SIO_000300: -3.165e0

DP
type: SiteQuality
SIO_000300: 1.499536e6

MQ
type: SiteQuality
SIO_000300: 3.631e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

GenotypeQuality
all individuals: 1232
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3015
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33445
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2914
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3479
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2041
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1633
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.051385328939338e-4
allele num: 16386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.533913674283642e-5
allele num: 66168
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.582e0

MQ
type: SiteQuality
SIO_000300: 3.263e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.602e0

MQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

DP
type: SiteQuality
SIO_000300: 1.500608e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.912e0

QD
type: SiteQuality
SIO_000300: 1.028e1

GenotypeQuality
all individuals: 3119
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1258
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1629
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2025
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4814
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2908
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35737
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1018
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509707418702255e-5
allele num: 66238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.464e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

VQSLOD
type: SiteQuality
SIO_000300: -7.041e0

QD
type: SiteQuality
SIO_000300: 7.76e0

DP
type: SiteQuality
SIO_000300: 1.4963e6

MQ
type: SiteQuality
SIO_000300: 3.321e1

GenotypeQuality
all individuals: 209
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1134
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2169
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3189
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4230
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27952
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4199
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1220
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1923
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3473
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1013
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4355
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1507
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514279657167086e-5
allele num: 66038
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.090000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

MQRankSum
type: SiteQuality
SIO_000300: -1.205e0

MQ
type: SiteQuality
SIO_000300: 3.053e1

FS
type: SiteQuality
SIO_000300: 3.536e0

DP
type: SiteQuality
SIO_000300: 1.472963e6

VQSLOD
type: SiteQuality
SIO_000300: -4.423e0

QD
type: SiteQuality
SIO_000300: 9.84e0

GenotypeQuality
all individuals: 160
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5165
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3468
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1808
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3404
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4259
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3174
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1374
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3337
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2748
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 966
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5049
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21849
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522904483430799e-5
allele num: 65664
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.152e0

FS
type: SiteQuality
SIO_000300: 3.998e0

VQSLOD
type: SiteQuality
SIO_000300: -4.505e0

MQRankSum
type: SiteQuality
SIO_000300: 9.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 3.137e1

DP
type: SiteQuality
SIO_000300: 1.493284e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e-1

QD
type: SiteQuality
SIO_000300: 8.199999999999999e0

GenotypeQuality
all individuals: 219
bin: 1.25e1
variant carriers: 80

GenotypeQuality
all individuals: 1214
bin: 3.25e1
variant carriers: 242

GenotypeQuality
all individuals: 669
bin: 2.75e1
variant carriers: 139

GenotypeQuality
all individuals: 5795
bin: 6.25e1
variant carriers: 815

GenotypeQuality
all individuals: 350
bin: 2.5e0
variant carriers: 55

GenotypeQuality
all individuals: 801
bin: 2.25e1
variant carriers: 180

GenotypeQuality
all individuals: 829
bin: 8.75e1
variant carriers: 333

GenotypeQuality
all individuals: 1735
bin: 5.25e1
variant carriers: 655

GenotypeQuality
all individuals: 181
bin: 7.5e0
variant carriers: 65

GenotypeQuality
all individuals: 1527
bin: 7.25e1
variant carriers: 431

GenotypeQuality
all individuals: 2236
bin: 4.75e1
variant carriers: 579

GenotypeQuality
all individuals: 1701
bin: 3.75e1
variant carriers: 376

GenotypeQuality
all individuals: 3178
bin: 6.75e1
variant carriers: 822

GenotypeQuality
all individuals: 759
bin: 5.75e1
variant carriers: 406

African
type: Population
allele count: 6042
allele frequency: 6.1817065684469e-1
allele num: 9774
num of homozygotes: 1833

East Asian
type: Population
allele count: 5876
allele frequency: 7.065897065897065e-1
allele num: 8316
num of homozygotes: 2061

Latino
type: Population
allele count: 4619
allele frequency: 4.144831299353912e-1
allele num: 11144
num of homozygotes: 928

Other
type: Population
allele count: 306
allele frequency: 3.485193621867881e-1
allele num: 878
num of homozygotes: 64

European (Non-Finnish)
type: Population
allele count: 18435
allele frequency: 2.846400889355526e-1
allele num: 64766
num of homozygotes: 2500

South Asian
type: Population
allele count: 5729
allele frequency: 3.537293158804643e-1
allele num: 16196
num of homozygotes: 1041

European (Finnish)
type: Population
allele count: 2053
allele frequency: 3.171146122953352e-1
allele num: 6474
num of homozygotes: 328

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.066e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.42e0

DP
type: SiteQuality
SIO_000300: 2.11631e6

QD
type: SiteQuality
SIO_000300: 1.857e1

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.37e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.11e-1

GenotypeQuality
all individuals: 1037
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3087
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10323
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1521
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2383
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3028
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14316
bin: 9.75e1
variant carriers: 3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.835483300936562e-5
allele num: 11318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.054647646393989e-5
allele num: 65474
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.08394e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.38e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.255e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

GenotypeQuality
all individuals: 2220
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11436
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2635
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14336
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1552
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3166
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1564
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2893
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.572194958393026e-5
allele num: 65614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16278
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.32e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.8e0

DP
type: SiteQuality
SIO_000300: 2.088845e6

GenotypeQuality
all individuals: 1606
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14368
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 413
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17652
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1386
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3595
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9940
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.078288353999514e-5
allele num: 65808
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16304
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.931e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

QD
type: SiteQuality
SIO_000300: 1.2e1

DP
type: SiteQuality
SIO_000300: 2.135215e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.397e0

GenotypeQuality
all individuals: 212
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4561
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2317
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7149
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3664
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1623
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14408
bin: 9.75e1
variant carriers: 34

GenotypeQuality
all individuals: 18629
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 30
allele frequency: 3.00240192153723e-3
allele num: 9992
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.632964718272775e-4
allele num: 11394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516898246465627e-5
allele num: 65924
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.63e-1

FS
type: SiteQuality
SIO_000300: 1.639e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

QD
type: SiteQuality
SIO_000300: 1.398e1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

DP
type: SiteQuality
SIO_000300: 2.146533e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19901
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2393
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4770
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3786
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14423
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1693
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3490
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.920634920634921e-5
allele num: 10080
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.336994624912363e-4
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

FS
type: SiteQuality
SIO_000300: 3.346e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.169605e6

GenotypeQuality
all individuals: 2393
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4770
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7325
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3786
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3490
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14423
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 190
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512081531436175e-5
allele num: 66134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.346e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.264e1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.169605e6

GenotypeQuality
all individuals: 499
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4811
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2405
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1705
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7364
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20297
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3505
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14426
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 151
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.11545988258317e-5
allele num: 16352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.174625e6

MQ
type: SiteQuality
SIO_000300: 5.986e1

QD
type: SiteQuality
SIO_000300: 3.299e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 7.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e0

VQSLOD
type: SiteQuality
SIO_000300: 4.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

GenotypeQuality
all individuals: 20565
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4897
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7490
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14443
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3904
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3561
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.960015680125441e-4
allele num: 10204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.231e1

DP
type: SiteQuality
SIO_000300: 2.184422e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.327e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 5.884e1

FS
type: SiteQuality
SIO_000300: 5.072e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1

GenotypeQuality
all individuals: 3601
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2446
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14449
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20680
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7534
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3932
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4920
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505343971097396e-5
allele num: 66430
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
SIO_000300: 8.32e-1

DP
type: SiteQuality
SIO_000300: 2.189553e6

FS
type: SiteQuality
SIO_000300: 4.091e0

QD
type: SiteQuality
SIO_000300: 1.053e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1794
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20519
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4045
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3726
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14480
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.084205402774397e-5
allele num: 16436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.83e0

FS
type: SiteQuality
SIO_000300: 1.145e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.664e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.569e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 7.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-1

DP
type: SiteQuality
SIO_000300: 2.205992e6

GenotypeQuality
all individuals: 2499
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20495
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1794
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14482
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 84
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501366243281386e-5
allele num: 66606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -8.9e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.591e0

DP
type: SiteQuality
SIO_000300: 2.206829e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

QD
type: SiteQuality
SIO_000300: 1.153e1

GenotypeQuality
all individuals: 168
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3747
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5127
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4065
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20536
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14489
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7788
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.908e1

MQRankSum
type: SiteQuality
SIO_000300: -3.95e-1

QD
type: SiteQuality
SIO_000300: 8.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.092e0

FS
type: SiteQuality
SIO_000300: 7.349e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.091e0

DP
type: SiteQuality
SIO_000300: 2.209929e6

GenotypeQuality
all individuals: 4094
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20488
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3780
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5150
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7830
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2520
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.632055480639569e-5
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.999550022498874e-5
allele num: 66670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.214489e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.28e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.38e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

FS
type: SiteQuality
SIO_000300: 1.919e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1810
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3785
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5171
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14504
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4103
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20385
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7871
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2524
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.053e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.348e1

DP
type: SiteQuality
SIO_000300: 2.21686e6

GenotypeQuality
all individuals: 20420
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7889
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14507
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4108
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5185
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2523
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.15e-1

DP
type: SiteQuality
SIO_000300: 2.217715e6

QD
type: SiteQuality
SIO_000300: 1.259e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

MQRankSum
type: SiteQuality
SIO_000300: 2.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.072e0

MQ
type: SiteQuality
SIO_000300: 5.714e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-1

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20347
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2532
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3807
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1817
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5214
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14510
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998320940273447e-5
allele num: 66704
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.859e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.78e-1

FS
type: SiteQuality
SIO_000300: 8.120000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.05e-1

DP
type: SiteQuality
SIO_000300: 2.220532e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.55e-1

QD
type: SiteQuality
SIO_000300: 1.05e1

GenotypeQuality
all individuals: 61
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20379
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4118
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2533
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7920
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14509
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1817
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5220
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.220843e6

MQRankSum
type: SiteQuality
SIO_000300: -1.695e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.799e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

FS
type: SiteQuality
SIO_000300: 1.968e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.707e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.347e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20407
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3865
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1836
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14523
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7974
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4152
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5249
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.224663e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e-1

QD
type: SiteQuality
SIO_000300: 1.305e1

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
SIO_000300: 1.755e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

VQSLOD
type: SiteQuality
SIO_000300: 5.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e-1

GenotypeQuality
all individuals: 2551
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5252
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7975
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20435
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3867
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14525
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4153
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.63e-1

QD
type: SiteQuality
SIO_000300: 9.44e0

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 2.224845e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 7.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.11e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20428
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14524
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3863
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4155
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7979
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5255
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.225171e6

FS
type: SiteQuality
SIO_000300: 8.682e0

MQRankSum
type: SiteQuality
SIO_000300: 8.31e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

VQSLOD
type: SiteQuality
SIO_000300: -1.662e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.092e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.23e-1

QD
type: SiteQuality
SIO_000300: 7.56e0

GenotypeQuality
all individuals: 5258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4157
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3864
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14524
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20438
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8003
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.01e-1

FS
type: SiteQuality
SIO_000300: 1.222e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e-1

QD
type: SiteQuality
SIO_000300: 1.006e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.225706e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

MQRankSum
type: SiteQuality
SIO_000300: -1.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.93e-1

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20446
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8002
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2555
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4158
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14524
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5259
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1841
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3863
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

QD
type: SiteQuality
SIO_000300: 9.42e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.225741e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -4.492e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
all individuals: 14525
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3868
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5268
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4159
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1841
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8002
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.97e-1

DP
type: SiteQuality
SIO_000300: 2.226585e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.386e0

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

MQ
type: SiteQuality
SIO_000300: 6.064e1

MQRankSum
type: SiteQuality
SIO_000300: 1.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.159999999999999e-1

FS
type: SiteQuality
SIO_000300: 2.006e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.63e1

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3869
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5268
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1840
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20445
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14524
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4161
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.19e0

VQSLOD
type: SiteQuality
SIO_000300: -4.579e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.226556e6

MQ
type: SiteQuality
SIO_000300: 5.8e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.67e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.235e0

QD
type: SiteQuality
SIO_000300: 1.15e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20427
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8005
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1837
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14526
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3869
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4161
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.247e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

DP
type: SiteQuality
SIO_000300: 2.226801e6

FS
type: SiteQuality
SIO_000300: 2.051e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-1

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8012
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14526
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4163
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3870
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20411
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5271
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.399999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.021e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

DP
type: SiteQuality
SIO_000300: 2.226632e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 6.322e0

VQSLOD
type: SiteQuality
SIO_000300: 2.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.134e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 9.98e0

GenotypeQuality
all individuals: 5266
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3868
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8008
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20390
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e-1

FS
type: SiteQuality
SIO_000300: 5.154e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

MQRankSum
type: SiteQuality
SIO_000300: -1.723e0

QD
type: SiteQuality
SIO_000300: 1.181e1

VQSLOD
type: SiteQuality
SIO_000300: -3.904e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.226593e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.38e-1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4162
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20398
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3865
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14528
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.341e-1

FS
type: SiteQuality
SIO_000300: 7.21e0

DP
type: SiteQuality
SIO_000300: 2.226511e6

MQRankSum
type: SiteQuality
SIO_000300: -1.09e0

QD
type: SiteQuality
SIO_000300: 1.039e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.751e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3863
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7997
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5272
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14529
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20382
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2558
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4158
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.571e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.399999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.382e1

DP
type: SiteQuality
SIO_000300: 2.226717e6

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.556e0

GenotypeQuality
all individuals: 7997
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5271
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14530
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3860
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1840
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4160
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e-1

DP
type: SiteQuality
SIO_000300: 2.226562e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.461e0

QD
type: SiteQuality
SIO_000300: 1.008e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.242e0

MQRankSum
type: SiteQuality
SIO_000300: -4.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-2

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4159
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1841
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7993
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20328
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14528
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

FS
type: SiteQuality
SIO_000300: 9.721e0

DP
type: SiteQuality
SIO_000300: 2.226447e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.183e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.23e0

VQSLOD
type: SiteQuality
SIO_000300: -9.575e-1

QD
type: SiteQuality
SIO_000300: 1.058e1

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2558
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1841
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14529
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3853
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4160
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 1.16e1

VQSLOD
type: SiteQuality
SIO_000300: -4.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

DP
type: SiteQuality
SIO_000300: 2.226445e6

FS
type: SiteQuality
SIO_000300: 1.3028e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.204e0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1837
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5272
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20191
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14532
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4151
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3855
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

QD
type: SiteQuality
SIO_000300: 1.61e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 2.226047e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.15e-1

FS
type: SiteQuality
SIO_000300: 4.17e-1

GenotypeQuality
all individuals: 44
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3855
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1837
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20191
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7988
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4151
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5272
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.226047e6

FS
type: SiteQuality
SIO_000300: 4.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

QD
type: SiteQuality
SIO_000300: 1.61e1

MQRankSum
type: SiteQuality
SIO_000300: -2.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2556
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20136
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14531
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 87
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7967
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3853
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.071e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.633e1

DP
type: SiteQuality
SIO_000300: 2.22552e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 1.668e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7903
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14536
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3822
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1834
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4149
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2561
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5276
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.995232526760817e-5
allele num: 66702
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: -4.11e-1

DP
type: SiteQuality
SIO_000300: 2.225545e6

QD
type: SiteQuality
SIO_000300: 1.385e1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

GenotypeQuality
all individuals: 190
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3836
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7898
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2563
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19468
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14542
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4160
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.36e0

FS
type: SiteQuality
SIO_000300: 7.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.266e0

QD
type: SiteQuality
SIO_000300: 1.555e1

VQSLOD
type: SiteQuality
SIO_000300: -3.471e-1

DP
type: SiteQuality
SIO_000300: 2.225353e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

GenotypeQuality
all individuals: 62
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14553
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18680
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3857
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1845
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5327
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7855
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2573
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.363e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.356e1

VQSLOD
type: SiteQuality
SIO_000300: 2.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
SIO_000300: 2.2283e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14553
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3857
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7855
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1845
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5327
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

DP
type: SiteQuality
SIO_000300: 2.2283e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

FS
type: SiteQuality
SIO_000300: 2.363e0

QD
type: SiteQuality
SIO_000300: 1.356e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.49e0

GenotypeQuality
all individuals: 775
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3577
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10540
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2236
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 372
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2193
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3736
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31443
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502268425322237e-5
allele num: 66566
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.87e-1

QD
type: SiteQuality
SIO_000300: 1.427e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.25e0

MQRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-1

FS
type: SiteQuality
SIO_000300: 7.263e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.725512e6

GenotypeQuality
all individuals: 871
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3568
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2234
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 804
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 890
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3723
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2185
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.145e0

QD
type: SiteQuality
SIO_000300: 6.81e0

DP
type: SiteQuality
SIO_000300: 1.723846e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.05e-1

FS
type: SiteQuality
SIO_000300: 5.25e0

GenotypeQuality
all individuals: 31586
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10255
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3624
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2224
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 698
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.93050193050193e-4
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66554
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.04e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.315e0

MQRankSum
type: SiteQuality
SIO_000300: -8.2e-2

FS
type: SiteQuality
SIO_000300: 1.996e0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 1.715857e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

QD
type: SiteQuality
SIO_000300: 1.198e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2218
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1535
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29126
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1080
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1902
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3324
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213150551983501e-4
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66504
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.492e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 1.26e1

DP
type: SiteQuality
SIO_000300: 1.706717e6

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

GenotypeQuality
all individuals: 861
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3265
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2061
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2206
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32214
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3392
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516070345664039e-4
allele num: 6596
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.29e-1

FS
type: SiteQuality
SIO_000300: 3.581e0

MQ
type: SiteQuality
SIO_000300: 5.72e1

MQRankSum
type: SiteQuality
SIO_000300: 9.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.295e0

DP
type: SiteQuality
SIO_000300: 1.704331e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.318e0

QD
type: SiteQuality
SIO_000300: 2.151e1

GenotypeQuality
all individuals: 1087
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32479
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1007
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3397
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2061
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3279
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9572
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503171692270691e-5
allele num: 66526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.648e0

FS
type: SiteQuality
SIO_000300: 1.152e0

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

MQRankSum
type: SiteQuality
SIO_000300: -9.5e-2

QD
type: SiteQuality
SIO_000300: 1.394e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

DP
type: SiteQuality
SIO_000300: 1.703378e6

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32479
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2061
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1007
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3397
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503171692270691e-5
allele num: 66526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

QD
type: SiteQuality
SIO_000300: 1.394e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.648e0

DP
type: SiteQuality
SIO_000300: 1.703378e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

FS
type: SiteQuality
SIO_000300: 1.152e0

MQRankSum
type: SiteQuality
SIO_000300: -9.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.57e-1

GenotypeQuality
all individuals: 32450
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3326
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 465
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.474031613687685e-4
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.511685264835925e-5
allele num: 66494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.70173e6

FS
type: SiteQuality
SIO_000300: 2.456e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.31e-1

QD
type: SiteQuality
SIO_000300: 1.233e1

MQ
type: SiteQuality
SIO_000300: 5.942e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.774e0

MQRankSum
type: SiteQuality
SIO_000300: 6.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.17e-1

GenotypeQuality
all individuals: 858
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1024
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3326
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32450
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66494
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.656237929702588e-5
allele num: 10356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.774e0

DP
type: SiteQuality
SIO_000300: 1.70173e6

MQRankSum
type: SiteQuality
SIO_000300: 6.21e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.31e-1

FS
type: SiteQuality
SIO_000300: 2.456e0

QD
type: SiteQuality
SIO_000300: 1.233e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.17e-1

GenotypeQuality
all individuals: 34280
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2021
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3271
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3174
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9408
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.518372304889159e-4
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -9.57e-1

QD
type: SiteQuality
SIO_000300: 1.569e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.048e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.70077e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
all individuals: 631
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2189
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 240
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34811
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3259
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3148
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9392
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2016
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.736714136853074e-4
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.701304e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

FS
type: SiteQuality
SIO_000300: 6.81e0

QD
type: SiteQuality
SIO_000300: 1.003e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.014e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.268e0

GenotypeQuality
all individuals: 3225
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9382
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35917
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3117
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50253929140247e-5
allele num: 66554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.749e0

MQRankSum
type: SiteQuality
SIO_000300: 9.28e-1

DP
type: SiteQuality
SIO_000300: 1.704141e6

QD
type: SiteQuality
SIO_000300: 9.300000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.283e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.944e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e0

GenotypeQuality
all individuals: 3092
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3204
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 359
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9364
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35987
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.508972855983407e-5
allele num: 66534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

QD
type: SiteQuality
SIO_000300: 1.203e1

DP
type: SiteQuality
SIO_000300: 1.705435e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.598e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1987
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36122
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3201
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.650646593321752e-5
allele num: 10362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.705785e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 2.413e1

QD
type: SiteQuality
SIO_000300: 1.172e1

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.86e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.777e0

MQRankSum
type: SiteQuality
SIO_000300: -2.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

GenotypeQuality
all individuals: 505
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3087
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3199
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2183
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502087902184036e-5
allele num: 66574
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.152e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.705549e6

MQRankSum
type: SiteQuality
SIO_000300: -1.171e0

FS
type: SiteQuality
SIO_000300: 9.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.67e-1

GenotypeQuality
all individuals: 3106
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9360
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2179
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36790
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3214
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1971
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501726986033939e-5
allele num: 66590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.66e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.391e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

QD
type: SiteQuality
SIO_000300: 8.17e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

DP
type: SiteQuality
SIO_000300: 1.708228e6

GenotypeQuality
all individuals: 251
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36902
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3172
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1949
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9313
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 5.015e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.067e0

QD
type: SiteQuality
SIO_000300: 8.07e0

VQSLOD
type: SiteQuality
SIO_000300: -4.301e-1

DP
type: SiteQuality
SIO_000300: 1.710664e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.429999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.71e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.036e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3161
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9299
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2173
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36635
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3046
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501366243281386e-5
allele num: 66606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.02e0

QD
type: SiteQuality
SIO_000300: 7.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.61e-2

FS
type: SiteQuality
SIO_000300: 1.282e0

DP
type: SiteQuality
SIO_000300: 1.710467e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.042e0

MQRankSum
type: SiteQuality
SIO_000300: -4.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.811e0

GenotypeQuality
all individuals: 251
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36682
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1933
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3155
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.336513443191674e-4
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.28e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.388e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.1e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.87e-1

FS
type: SiteQuality
SIO_000300: 9.999000000000001e0

DP
type: SiteQuality
SIO_000300: 1.710502e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

GenotypeQuality
all individuals: 301
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9259
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3025
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3135
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2171
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 36755
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.676036786395974e-5
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.646922631680494e-5
allele num: 10366
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

FS
type: SiteQuality
SIO_000300: 1.4682e1

MQRankSum
type: SiteQuality
SIO_000300: -4.88e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.283e0

QD
type: SiteQuality
SIO_000300: 1.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

DP
type: SiteQuality
SIO_000300: 1.710885e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
all individuals: 211
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3016
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36686
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1926
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2189
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 800
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9242
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 22
allele frequency: 1.907404196289232e-3
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

QD
type: SiteQuality
SIO_000300: 1.166e1

DP
type: SiteQuality
SIO_000300: 1.711191e6

FS
type: SiteQuality
SIO_000300: 1.114e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.76e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

GenotypeQuality
all individuals: 1924
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37317
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3016
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2167
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3123
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9256
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.103e0

DP
type: SiteQuality
SIO_000300: 1.711291e6

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 1.816e0

MQRankSum
type: SiteQuality
SIO_000300: -7.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.85e-1

QD
type: SiteQuality
SIO_000300: 1.489e1

GenotypeQuality
all individuals: 279
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37354
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3099
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1917
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2166
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 952
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66596
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212415130940834e-4
allele num: 16496
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.936e1

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

DP
type: SiteQuality
SIO_000300: 1.711996e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.077e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.66e-1

FS
type: SiteQuality
SIO_000300: 5.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e-1

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

GenotypeQuality
all individuals: 274
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3001
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37567
bin: 6.25e1
variant carriers: 0