1-45213093-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213093
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213093
    reference: chr 1
allele count: 3
allele frequency: 2.471047559428694e-5
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.311T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.41T>C
  hgvsp: ENSP00000361291.1:p.Leu14Pro
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.392T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.203T>C
  hgvsp: ENSP00000410346.1:p.Leu68Pro
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.203T>C
  hgvsp: ENSP00000361292.4:p.Leu68Pro
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.203T>C
  hgvsp: ENSP00000361298.4:p.Leu68Pro
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.176T>C
  hgvsp: ENSP00000395050.1:p.Leu59Pro
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-137T>C
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25604
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2132
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu68Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

1-45213098-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213098
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213098
    reference: chr 1
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.208C>G
  hgvsp: ENSP00000361298.4:p.Gln70Glu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.316C>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.181C>G
  hgvsp: ENSP00000395050.1:p.Gln61Glu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.208C>G
  hgvsp: ENSP00000361292.4:p.Gln70Glu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.208C>G
  hgvsp: ENSP00000410346.1:p.Gln70Glu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-132C>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.46C>G
  hgvsp: ENSP00000361291.1:p.Gln16Glu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.397C>G
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10093
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3849
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25615
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln70Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

1-45213098-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213098
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213098
    reference: chr 1
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.181C>T
  hgvsp: ENSP00000395050.1:p.Gln61Ter
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.208C>T
  hgvsp: ENSP00000361292.4:p.Gln70Ter
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.208C>T
  hgvsp: ENSP00000361298.4:p.Gln70Ter
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.46C>T
  hgvsp: ENSP00000361291.1:p.Gln16Ter
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.397C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-132C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.208C>T
  hgvsp: ENSP00000410346.1:p.Gln70Ter
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.316C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9009
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3849
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln70Ter
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-45213109-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213109
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213109
    reference: chr 1
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.219C>T
  hgvsp: ENST00000372218.4:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-121C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.57C>T
  hgvsp: ENST00000372217.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.219C>T
  hgvsp: ENST00000372224.4:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.408C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.327C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.192C>T
  hgvsp: ENST00000455186.1:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.219C>T
  hgvsp: ENST00000452259.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10583
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9007
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3559
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10091
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro73Pro
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD

1-45213110-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213110
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213110
    reference: chr 1
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.409T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.220T>C
  hgvsp: ENST00000372224.4:c.220T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.58T>C
  hgvsp: ENST00000372217.1:c.58T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.220T>C
  hgvsp: ENST00000372218.4:c.220T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.220T>C
  hgvsp: ENST00000452259.1:c.220T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.193T>C
  hgvsp: ENST00000455186.1:c.193T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-120T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.328T>C
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4611
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu74Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS

1-45213115-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213115
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213115
    reference: chr 1
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.198T>A
  hgvsp: ENSP00000395050.1:p.His66Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.333T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.63T>A
  hgvsp: ENSP00000361291.1:p.His21Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-115T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.225T>A
  hgvsp: ENSP00000410346.1:p.His75Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.414T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.225T>A
  hgvsp: ENSP00000361298.4:p.His75Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.225T>A
  hgvsp: ENSP00000361292.4:p.His75Gln
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His75Gln
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

1-45213117-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213117
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213117
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.227C>G
  hgvsp: ENSP00000410346.1:p.Pro76Arg
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.335C>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.65C>G
  hgvsp: ENSP00000361291.1:p.Pro22Arg
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-113C>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.227C>G
  hgvsp: ENSP00000361292.4:p.Pro76Arg
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.200C>G
  hgvsp: ENSP00000395050.1:p.Pro67Arg
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.227C>G
  hgvsp: ENSP00000361298.4:p.Pro76Arg
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.416C>G
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro76Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP

1-45213117-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213117
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213117
    reference: chr 1
allele count: 6
allele frequency: 4.942339373970346e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.227C>T
  hgvsp: ENSP00000361298.4:p.Pro76Leu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.65C>T
  hgvsp: ENSP00000361291.1:p.Pro22Leu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.227C>T
  hgvsp: ENSP00000410346.1:p.Pro76Leu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.416C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-113C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.200C>T
  hgvsp: ENSP00000395050.1:p.Pro67Leu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.227C>T
  hgvsp: ENSP00000361292.4:p.Pro76Leu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.335C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4607
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9005
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25614
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro76Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

1-45213118-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213118
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213118
    reference: chr 1
allele count: 68
allele frequency: 5.601317957166392e-4
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.66G>A
  hgvsp: ENST00000372217.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-112G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.201G>A
  hgvsp: ENST00000455186.1:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.228G>A
  hgvsp: ENST00000452259.1:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.228G>A
  hgvsp: ENST00000372218.4:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.417G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.228G>A
  hgvsp: ENST00000372224.4:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.336G>A
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5344
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10580
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17736
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 9.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3552
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro76Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

1-45213126-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213126
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213126
    reference: chr 1
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.74A>G
  hgvsp: ENSP00000361291.1:p.Asn25Ser
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.236A>G
  hgvsp: ENSP00000361292.4:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.425A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.344A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-104A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.236A>G
  hgvsp: ENSP00000361298.4:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.236A>G
  hgvsp: ENSP00000410346.1:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.209A>G
  hgvsp: ENSP00000395050.1:p.Asn70Ser
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4607
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1804
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asn79Ser
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

1-45213134-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213134
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213134
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.352T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.82T>C
  hgvsp: ENST00000372217.1:c.82T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.433T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.244T>C
  hgvsp: ENST00000452259.1:c.244T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.217T>C
  hgvsp: ENST00000455186.1:c.217T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.244T>C
  hgvsp: ENST00000372218.4:c.244T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.244T>C
  hgvsp: ENST00000372224.4:c.244T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-96T>C
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu82Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

1-45213152-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213152
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213152
    reference: chr 1
allele count: 36
allele frequency: 2.966381015161503e-4
allele num: 121360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.100A>G
  hgvsp: ENSP00000361291.1:p.Ile34Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.262A>G
  hgvsp: ENSP00000361298.4:p.Ile88Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.451A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-78A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.262A>G
  hgvsp: ENSP00000410346.1:p.Ile88Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.262A>G
  hgvsp: ENSP00000361292.4:p.Ile88Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.370A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.235A>G
  hgvsp: ENSP00000395050.1:p.Ile79Val
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10602
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9003
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10102
  bin: 9.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile88Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-45213160-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213160
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213160
    reference: chr 1
allele count: 2
allele frequency: 1.648777431534517e-5
allele num: 121302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.375+3A>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.267+3A>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.267+3A>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.267+3A>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.105+3A>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.456+3A>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-73+3A>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.240+3A>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17787
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8987
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3555
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: c.267+3A>T
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

1-45213161-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213161
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213161
    reference: chr 1
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.267+4G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.267+4G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.456+4G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.267+4G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.240+4G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.375+4G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.105+4G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-73+4G>A
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2135
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
hgvs: c.267+4G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/1-45213185-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213185
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213185
    reference: chr 1
allele count: 1
allele frequency: 8.271572260455268e-6
allele num: 120896
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.267+28A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.456+28A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.105+28A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.240+28A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.267+28A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.375+28A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.267+28A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-73+28A>C
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17223
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8131
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

1-45213189-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213189
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213189
    reference: chr 1
allele count: 1
allele frequency: 8.278145695364238e-6
allele num: 120800
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.105+32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.375+32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.267+32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.240+32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.267+32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-73+32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.456+32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.267+32C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5290
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10062
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1784
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2124
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8023
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

1-45213190-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213190
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213190
    reference: chr 1
allele count: 18
allele frequency: 1.490263611074314e-4
allele num: 120784
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.267+33G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-73+33G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.267+33G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.456+33G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.267+33G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.105+33G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.375+33G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.240+33G>A
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16919
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10256
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13515
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20357
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7965
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

1-45213190-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213190
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213190
    reference: chr 1
allele count: 1
allele frequency: 8.279242283746192e-6
allele num: 120784
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-73+33G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.456+33G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.105+33G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.267+33G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.267+33G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.240+33G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.267+33G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.375+33G>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2120
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7965
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

1-45213191-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213191
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213191
    reference: chr 1
allele count: 3
allele frequency: 2.484101748807631e-5
allele num: 120768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.456+34C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-73+34C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.105+34C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.267+34C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.375+34C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.240+34C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.267+34C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.267+34C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3651
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10153
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13211
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19322
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

1-45213288-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213288
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213288
    reference: chr 1
allele count: 1
allele frequency: 8.781173164734809e-6
allele num: 113880
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.268-36G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.241-36G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.376-36G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-72-36G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.106-36G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.457-36G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.268-36G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.268-36G>C
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7549
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9085
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19092
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3524
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3033
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-45213292-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213292
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213292
    reference: chr 1
allele count: 27
allele frequency: 2.370250719853922e-4
allele num: 113912
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.268-32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.106-32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.268-32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.376-32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.241-32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-72-32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.457-32C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.268-32C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8043
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12832
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20284
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7270
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4723
  bin: 9.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 3357
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5480
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3915
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-45213294-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213294
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213294
    reference: chr 1
allele count: 14
allele frequency: 1.227682486232418e-4
allele num: 114036
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-72-30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.241-30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.268-30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.268-30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.268-30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.376-30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.457-30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.106-30T>C
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7436
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7101
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21065
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12858
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28494
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3512
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3693
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

1-45213310-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213310
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213310
    reference: chr 1
allele count: 1
allele frequency: 8.729964730942487e-6
allele num: 114548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-72-14G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.268-14G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.457-14G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.106-14G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.376-14G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.241-14G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.268-14G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.268-14G>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4695
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2057
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

1-45213313-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213313
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213313
    reference: chr 1
allele count: 1
allele frequency: 8.714141308515458e-6
allele num: 114756
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.268-11T>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.376-11T>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-72-11T>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.241-11T>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.106-11T>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.457-11T>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.268-11T>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.268-11T>G
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26800
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-45213320-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213320
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213320
    reference: chr 1
allele count: 1
allele frequency: 8.681459874292461e-6
allele num: 115188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.457-4T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.268-4T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-72-4T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.106-4T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.241-4T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.268-4T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.268-4T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.376-4T>A
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4839
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
hgvs: c.268-4T>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

1-45213333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213333
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213333
    reference: chr 1
allele count: 7
allele frequency: 6.059032285986324e-5
allele num: 115530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.115C>T
  hgvsp: ENSP00000361291.1:p.Arg39Trp
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.277C>T
  hgvsp: ENSP00000361292.4:p.Arg93Trp
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.250C>T
  hgvsp: ENSP00000395050.1:p.Arg84Trp
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.385C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.466C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.277C>T
  hgvsp: ENSP00000410346.1:p.Arg93Trp
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-63C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.277C>T
  hgvsp: ENSP00000361298.4:p.Arg93Trp
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14246
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4588
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg93Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

1-45213334-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213334
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213334
    reference: chr 1
allele count: 2
allele frequency: 1.730223544881999e-5
allele num: 115592
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.467G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.278G>A
  hgvsp: ENSP00000361298.4:p.Arg93Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.386G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.116G>A
  hgvsp: ENSP00000361291.1:p.Arg39Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.278G>A
  hgvsp: ENSP00000410346.1:p.Arg93Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.251G>A
  hgvsp: ENSP00000395050.1:p.Arg84Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.278G>A
  hgvsp: ENSP00000361292.4:p.Arg93Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-62G>A
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29501
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3607
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4567
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg93Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS

1-45213335-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213335
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213335
    reference: chr 1
allele count: 88
allele frequency: 7.609955205036407e-4
allele num: 115638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.279G>A
  hgvsp: ENST00000372218.4:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.252G>A
  hgvsp: ENST00000455186.1:c.252G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-61G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.279G>A
  hgvsp: ENST00000452259.1:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.117G>A
  hgvsp: ENST00000372217.1:c.117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.279G>A
  hgvsp: ENST00000372224.4:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.387G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.468G>A
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29618
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14347
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg93Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

1-45213342-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213342
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213342
    reference: chr 1
allele count: 4
allele frequency: 3.465363689919257e-5
allele num: 115428
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-54G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.124G>A
  hgvsp: ENSP00000361291.1:p.Val42Ile
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.475G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.286G>A
  hgvsp: ENSP00000410346.1:p.Val96Ile
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.286G>A
  hgvsp: ENSP00000361292.4:p.Val96Ile
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.259G>A
  hgvsp: ENSP00000395050.1:p.Val87Ile
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.394G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.286G>A
  hgvsp: ENSP00000361298.4:p.Val96Ile
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29661
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39777
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4698
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Val96Ile
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

1-45213366-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213366
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213366
    reference: chr 1
allele count: 1
allele frequency: 8.858337467224152e-6
allele num: 112888
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.310A>G
  hgvsp: ENSP00000410346.1:p.Lys104Glu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.499A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.148A>G
  hgvsp: ENSP00000361291.1:p.Lys50Glu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-30A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.310A>G
  hgvsp: ENSP00000361292.4:p.Lys104Glu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.283A>G
  hgvsp: ENSP00000395050.1:p.Lys95Glu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.418A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.310A>G
  hgvsp: ENSP00000361298.4:p.Lys104Glu
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14483
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3291
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4692
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Lys104Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

1-45213374-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213374
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213374
    reference: chr 1
allele count: 1
allele frequency: 8.981659451400241e-6
allele num: 111338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.505+2T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.424+2T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.154+2T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.316+2T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.289+2T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.316+2T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-24+2T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.316+2T>A
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23242
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13889
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1911
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
hgvs: c.316+2T>A
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/1-45213387-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213387
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213387
    reference: chr 1
allele count: 1
allele frequency: 9.223900972199163e-6
allele num: 108414
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.154+15A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.289+15A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-24+15A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.424+15A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.316+15A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.316+15A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.505+15A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.316+15A>C
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14924
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3392
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2431
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3825
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1768
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

1-45213388-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213388
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213388
    reference: chr 1
allele count: 1
allele frequency: 9.230542017427263e-6
allele num: 108336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.316+16C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.505+16C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-24+16C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.289+16C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.316+16C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.154+16C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.424+16C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.316+16C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16005
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14493
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3397
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-45213398-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213398
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213398
    reference: chr 1
allele count: 1
allele frequency: 9.364523439402169e-6
allele num: 106786
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-24+26A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.316+26A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.154+26A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.289+26A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.316+26A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.505+26A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.424+26A>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.316+26A>C
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5920
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9274
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17786
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5941
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2049
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

1-45213398-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213398
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213398
    reference: chr 1
allele count: 1
allele frequency: 9.364523439402169e-6
allele num: 106786
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.154+26A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.289+26A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.505+26A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.316+26A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-24+26A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.424+26A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.316+26A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.316+26A>G
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5920
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9274
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2049
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4691
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP

1-45213402-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213402
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213402
    reference: chr 1
allele count: 1
allele frequency: 9.479032380374612e-6
allele num: 105496
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.505+30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-24+30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.316+30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.289+30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.154+30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.424+30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.316+30T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.316+30T>C
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21062
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7263
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4363
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4690
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5284
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

1-45213406-ATT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213406
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213404
    reference: chr 1
allele count: 2
allele frequency: 1.912228702552825e-5
allele num: 104590
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.289+36_289+37delTT
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-24+36_-24+37delTT
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.424+36_424+37delTT
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.505+36_505+37delTT
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.316+36_316+37delTT
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.316+36_316+37delTT
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.154+36_154+37delTT
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.316+36_316+37delTT
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7379
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9960
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6741
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16846
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: ATT
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

1-45213412-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213412
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213412
    reference: chr 1
allele count: 2
allele frequency: 1.956334611471946e-5
allele num: 102232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.316+40G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.154+40G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.289+40G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.505+40G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.424+40G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.316+40G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-24+40G>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.316+40G>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20743
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12946
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7620
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5620
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

1-45213422-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45213422
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45213422
    reference: chr 1
allele count: 3
allele frequency: 3.092209693046651e-5
allele num: 97018
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.289+50A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-24+50A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.316+50A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.424+50A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.316+50A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.154+50A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.505+50A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.316+50A>G
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12968
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19264
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10226
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12288
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6470
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3268
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5616
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4690
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

1-45216063-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216063
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216063
    reference: chr 1
allele count: 6
allele frequency: 5.441683294032287e-5
allele num: 110260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.155-51C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.317-51C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.290-51C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.317-51C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.317-51C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.588C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-23-51C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.425-51C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5002
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5975
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2804
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3128
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP

1-45216070-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216070
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216070
    reference: chr 1
allele count: 3
allele frequency: 2.72133526850508e-5
allele num: 110240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.425-44C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-23-44C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.290-44C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.317-44C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.317-44C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.317-44C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.155-44C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.595C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5002
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5975
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2797
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3368
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1974
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

1-45216076-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216076
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216076
    reference: chr 1
allele count: 1
allele frequency: 9.06059727457234e-6
allele num: 110368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.601C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.425-38C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-23-38C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.155-38C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.317-38C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.317-38C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.317-38C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.290-38C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5002
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5977
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3367
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2006
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2324
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum

1-45216077-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216077
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216077
    reference: chr 1
allele count: 1
allele frequency: 9.057806923787613e-6
allele num: 110402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.317-37G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.155-37G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.317-37G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.602G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.317-37G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.425-37G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.290-37G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-23-37G>A
  variant of: http://identifiers.org/hgnc/6393
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5977
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3006
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5002
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4370
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2654
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/1-45216096-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216096
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216096
    reference: chr 1
allele count: 19
allele frequency: 1.729064667018546e-4
allele num: 109886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.290-18C>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.155-18C>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-23-18C>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.317-18C>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.317-18C>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.621C>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.425-18C>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.317-18C>A
  variant of: http://identifiers.org/hgnc/6393
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5003
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5352
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1604
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3291
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2555
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3351
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

1-45216103-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216103
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216103
    reference: chr 1
allele count: 3
allele frequency: 2.697647651248112e-5
allele num: 111208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-23-11C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.317-11C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.290-11C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.628C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.155-11C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.425-11C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.317-11C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.317-11C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33996
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3360
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2673
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

1-45216107-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216107
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216107
    reference: chr 1
allele count: 1
allele frequency: 8.965072079179517e-6
allele num: 111544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.155-7T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-23-7T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.317-7T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.425-7T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.290-7T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.317-7T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.317-7T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.632T>A
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
hgvs: c.317-7T>A
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

1-45216110-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216110
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216110
    reference: chr 1
allele count: 1
allele frequency: 8.941504676406945e-6
allele num: 111838
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.317-4C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.635C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.425-4C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.155-4C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.317-4C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.290-4C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-23-4C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.317-4C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1666
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 2.75e1
  variant carriers: 0
hgvs: c.317-4C>T
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

1-45216116-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216116
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216116
    reference: chr 1
allele count: 1
allele frequency: 8.891259891526629e-6
allele num: 112470
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.157C>G
  hgvsp: ENSP00000361291.1:p.Leu53Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.319C>G
  hgvsp: ENSP00000361298.4:p.Leu107Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.319C>G
  hgvsp: ENSP00000361292.4:p.Leu107Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.292C>G
  hgvsp: ENSP00000395050.1:p.Leu98Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.427C>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.641C>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.319C>G
  hgvsp: ENSP00000410346.1:p.Leu107Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-21C>G
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3813
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu107Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-45216119-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216119
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216119
    reference: chr 1
allele count: 1
allele frequency: 8.864776696275021e-6
allele num: 112806
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.322C>T
  hgvsp: ENSP00000410346.1:p.Arg108Ter
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.160C>T
  hgvsp: ENSP00000361291.1:p.Arg54Ter
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.644C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.322C>T
  hgvsp: ENSP00000361292.4:p.Arg108Ter
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.295C>T
  hgvsp: ENSP00000395050.1:p.Arg99Ter
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-18C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.322C>T
  hgvsp: ENSP00000361298.4:p.Arg108Ter
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.430C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2812
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg108Ter
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

1-45216125-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216125
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216125
    reference: chr 1
allele count: 3
allele frequency: 2.641077559644335e-5
allele num: 113590
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.328C>T
  hgvsp: ENSP00000361292.4:p.Arg110Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.301C>T
  hgvsp: ENSP00000395050.1:p.Arg101Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.436C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.650C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.328C>T
  hgvsp: ENSP00000410346.1:p.Arg110Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.166C>T
  hgvsp: ENSP00000361291.1:p.Arg56Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.328C>T
  hgvsp: ENSP00000361298.4:p.Arg110Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-12C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6881
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3477
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3138
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3362
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg110Cys
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

1-45216134-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216134
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216134
    reference: chr 1
allele count: 3
allele frequency: 2.579846241164027e-5
allele num: 116286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.337C>T
  hgvsp: ENSP00000410346.1:p.Arg113Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.337C>T
  hgvsp: ENSP00000361292.4:p.Arg113Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.310C>T
  hgvsp: ENSP00000395050.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.337C>T
  hgvsp: ENSP00000361298.4:p.Arg113Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.445C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.175C>T
  hgvsp: ENSP00000361291.1:p.Arg59Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-3C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.659C>T
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3361
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg113Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

1-45216135-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216135
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216135
    reference: chr 1
allele count: 1
allele frequency: 8.567952430728104e-6
allele num: 116714
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.311G>A
  hgvsp: ENSP00000395050.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.338G>A
  hgvsp: ENSP00000361298.4:p.Arg113His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.446G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.176G>A
  hgvsp: ENSP00000361291.1:p.Arg59His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.338G>A
  hgvsp: ENSP00000410346.1:p.Arg113His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.660G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.338G>A
  hgvsp: ENSP00000361292.4:p.Arg113His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.-2G>A
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7063
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4492
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7630
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2825
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg113His
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum

1-45216137-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216137
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216137
    reference: chr 1
allele count: 1
allele frequency: 8.519338899301415e-6
allele num: 117380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.313A>G
  hgvsp: ENSP00000395050.1:p.Met105Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.340A>G
  hgvsp: ENSP00000361292.4:p.Met114Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.340A>G
  hgvsp: ENSP00000410346.1:p.Met114Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.340A>G
  hgvsp: ENSP00000361298.4:p.Met114Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.662A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.448A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.178A>G
  hgvsp: ENSP00000361291.1:p.Met60Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.1A>G
  hgvsp: ENSP00000361296.3:p.Met1?
  variant of: http://identifiers.org/hgnc/6393
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7063
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6411
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1841
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3364
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2937
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-45216152-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216152
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216152
    reference: chr 1
allele count: 1
allele frequency: 8.389120987902887e-6
allele num: 119202
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.677G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.355G>C
  hgvsp: ENSP00000410346.1:p.Glu119Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.16G>C
  hgvsp: ENSP00000361296.3:p.Glu6Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.355G>C
  hgvsp: ENSP00000361298.4:p.Glu119Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.193G>C
  hgvsp: ENSP00000361291.1:p.Glu65Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.463G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.355G>C
  hgvsp: ENSP00000361292.4:p.Glu119Gln
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.328G>C
  hgvsp: ENSP00000395050.1:p.Glu110Gln
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6409
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33997
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3161
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu119Gln
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-45216158-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216158
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216158
    reference: chr 1
allele count: 3
allele frequency: 2.508654859264463e-5
allele num: 119586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.199C>T
  hgvsp: ENSP00000361291.1:p.Arg67Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.22C>T
  hgvsp: ENSP00000361296.3:p.Arg8Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.361C>T
  hgvsp: ENSP00000361298.4:p.Arg121Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.683C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.469C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.334C>T
  hgvsp: ENSP00000395050.1:p.Arg112Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.361C>T
  hgvsp: ENSP00000410346.1:p.Arg121Cys
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.361C>T
  hgvsp: ENSP00000361292.4:p.Arg121Cys
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3365
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9293
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg121Cys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

1-45216159-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216159
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216159
    reference: chr 1
allele count: 2
allele frequency: 1.671374371145393e-5
allele num: 119662
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.470G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.23G>A
  hgvsp: ENSP00000361296.3:p.Arg8His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.684G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.362G>A
  hgvsp: ENSP00000410346.1:p.Arg121His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.362G>A
  hgvsp: ENSP00000361292.4:p.Arg121His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.200G>A
  hgvsp: ENSP00000361291.1:p.Arg67His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.335G>A
  hgvsp: ENSP00000395050.1:p.Arg112His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.362G>A
  hgvsp: ENSP00000361298.4:p.Arg121His
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7065
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5937
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9345
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3367
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg121His
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-45216161-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216161
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216161
    reference: chr 1
allele count: 1
allele frequency: 8.347942232239753e-6
allele num: 119790
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.364A>G
  hgvsp: ENSP00000410346.1:p.Ile122Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.686A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.472A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.202A>G
  hgvsp: ENSP00000361291.1:p.Ile68Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.25A>G
  hgvsp: ENSP00000361296.3:p.Ile9Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.364A>G
  hgvsp: ENSP00000361292.4:p.Ile122Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.364A>G
  hgvsp: ENSP00000361298.4:p.Ile122Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.337A>G
  hgvsp: ENSP00000395050.1:p.Ile113Val
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9417
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3166
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33995
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile122Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD

1-45216162-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216162
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216162
    reference: chr 1
allele count: 1
allele frequency: 8.345294922722569e-6
allele num: 119828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.26T>A
  hgvsp: ENSP00000361296.3:p.Ile9Asn
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.687T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.203T>A
  hgvsp: ENSP00000361291.1:p.Ile68Asn
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.338T>A
  hgvsp: ENSP00000395050.1:p.Ile113Asn
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.365T>A
  hgvsp: ENSP00000361292.4:p.Ile122Asn
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.365T>A
  hgvsp: ENSP00000410346.1:p.Ile122Asn
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.473T>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.365T>A
  hgvsp: ENSP00000361298.4:p.Ile122Asn
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33996
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3060
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile122Asn
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

1-45216165-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216165
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216165
    reference: chr 1
allele count: 11
allele frequency: 9.173699836541348e-5
allele num: 119908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.368C>T
  hgvsp: ENSP00000361292.4:p.Thr123Met
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.368C>T
  hgvsp: ENSP00000361298.4:p.Thr123Met
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.368C>T
  hgvsp: ENSP00000410346.1:p.Thr123Met
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.206C>T
  hgvsp: ENSP00000361291.1:p.Thr69Met
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.476C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.341C>T
  hgvsp: ENSP00000395050.1:p.Thr114Met
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.690C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.29C>T
  hgvsp: ENSP00000361296.3:p.Thr10Met
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6024
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6412
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1721
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Thr123Met
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

1-45216166-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216166
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216166
    reference: chr 1
allele count: 4
allele frequency: 3.334722801167153e-5
allele num: 119950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.691G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.369G>A
  hgvsp: ENST00000372224.4:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.369G>A
  hgvsp: ENST00000452259.1:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.369G>A
  hgvsp: ENST00000372218.4:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.477G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.207G>A
  hgvsp: ENST00000372217.1:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.30G>A
  hgvsp: ENST00000372222.3:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.342G>A
  hgvsp: ENST00000455186.1:c.342G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3172
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3071
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2861
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr123Thr
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

1-45216169-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216169
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216169
    reference: chr 1
allele count: 1
allele frequency: 8.335139280177371e-6
allele num: 119974
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.210T>C
  hgvsp: ENST00000372217.1:c.210T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.372T>C
  hgvsp: ENST00000372224.4:c.372T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.345T>C
  hgvsp: ENST00000455186.1:c.345T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.372T>C
  hgvsp: ENST00000372218.4:c.372T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.372T>C
  hgvsp: ENST00000452259.1:c.372T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.480T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.33T>C
  hgvsp: ENST00000372222.3:c.33T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.694T>C
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6415
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala124Ala
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

1-45216182-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216182
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216182
    reference: chr 1
allele count: 2
allele frequency: 1.667500416875104e-5
allele num: 119940
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.358A>G
  hgvsp: ENSP00000395050.1:p.Met120Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.493A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.385A>G
  hgvsp: ENSP00000361292.4:p.Met129Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.385A>G
  hgvsp: ENSP00000410346.1:p.Met129Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.223A>G
  hgvsp: ENSP00000361291.1:p.Met75Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.46A>G
  hgvsp: ENSP00000361296.3:p.Met16Val
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.707A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.385A>G
  hgvsp: ENSP00000361298.4:p.Met129Val
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1730
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33989
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Met129Val
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

1-45216187-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216187
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216187
    reference: chr 1
allele count: 1
allele frequency: 8.34278849362611e-6
allele num: 119864
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.498G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.51G>C
  hgvsp: ENSP00000361296.3:p.Glu17Asp
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.390G>C
  hgvsp: ENSP00000361298.4:p.Glu130Asp
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.712G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.390G>C
  hgvsp: ENSP00000361292.4:p.Glu130Asp
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.390G>C
  hgvsp: ENSP00000410346.1:p.Glu130Asp
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.363G>C
  hgvsp: ENSP00000395050.1:p.Glu121Asp
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.228G>C
  hgvsp: ENSP00000361291.1:p.Glu76Asp
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5984
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3153
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu130Asp
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

1-45216189-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216189
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216189
    reference: chr 1
allele count: 9
allele frequency: 7.512019230769231e-5
allele num: 119808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.230T>C
  hgvsp: ENSP00000361291.1:p.Val77Ala
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.500T>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.392T>C
  hgvsp: ENSP00000361298.4:p.Val131Ala
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.392T>C
  hgvsp: ENSP00000361292.4:p.Val131Ala
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.365T>C
  hgvsp: ENSP00000395050.1:p.Val122Ala
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.392T>C
  hgvsp: ENSP00000410346.1:p.Val131Ala
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.53T>C
  hgvsp: ENSP00000361296.3:p.Val18Ala
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.714T>C
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7062
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6409
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3363
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2863
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val131Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS

1-45216211-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216211
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216211
    reference: chr 1
allele count: 5
allele frequency: 4.233556865135813e-5
allele num: 118104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.387C>T
  hgvsp: ENST00000455186.1:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.736C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.414C>T
  hgvsp: ENST00000452259.1:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.252C>T
  hgvsp: ENST00000372217.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.414C>T
  hgvsp: ENST00000372224.4:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.414C>T
  hgvsp: ENST00000372218.4:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.522C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.75C>T
  hgvsp: ENST00000372222.3:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6881
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33984
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2832
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn138Asn
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-45216216-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216216
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216216
    reference: chr 1
allele count: 2
allele frequency: 1.699553017556383e-5
allele num: 117678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.392G>A
  hgvsp: ENSP00000395050.1:p.Arg131His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.80G>A
  hgvsp: ENSP00000361296.3:p.Arg27His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.527G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.419G>A
  hgvsp: ENSP00000361292.4:p.Arg140His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.419G>A
  hgvsp: ENSP00000410346.1:p.Arg140His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.257G>A
  hgvsp: ENSP00000361291.1:p.Arg86His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.419G>A
  hgvsp: ENSP00000361298.4:p.Arg140His
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.741G>A
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7051
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2720
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg140His
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

1-45216220-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216220
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216220
    reference: chr 1
allele count: 2
allele frequency: 1.70543693294222e-5
allele num: 117272
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.423G>A
  hgvsp: ENST00000372224.4:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.423G>A
  hgvsp: ENST00000452259.1:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.531G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.423G>A
  hgvsp: ENST00000372218.4:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.396G>A
  hgvsp: ENST00000455186.1:c.396G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.745G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.261G>A
  hgvsp: ENST00000372217.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.84G>A
  hgvsp: ENST00000372222.3:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4327
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys141Lys
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD

1-45216220-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216220
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216220
    reference: chr 1
allele count: 3
allele frequency: 2.55815539941333e-5
allele num: 117272
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.84G>C
  hgvsp: ENSP00000361296.3:p.Lys28Asn
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.261G>C
  hgvsp: ENSP00000361291.1:p.Lys87Asn
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.423G>C
  hgvsp: ENSP00000410346.1:p.Lys141Asn
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.745G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.396G>C
  hgvsp: ENSP00000395050.1:p.Lys132Asn
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.423G>C
  hgvsp: ENSP00000361298.4:p.Lys141Asn
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.531G>C
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.423G>C
  hgvsp: ENSP00000361292.4:p.Lys141Asn
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4327
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3142
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys141Asn
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-45216223-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216223
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216223
    reference: chr 1
allele count: 1
allele frequency: 8.549346829902196e-6
allele num: 116968
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.399G>A
  hgvsp: ENST00000455186.1:c.399G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.426G>A
  hgvsp: ENST00000372218.4:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.426G>A
  hgvsp: ENST00000452259.1:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.748G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.534G>A
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.87G>A
  hgvsp: ENST00000372222.3:c.87G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.426G>A
  hgvsp: ENST00000372224.4:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.264G>A
  hgvsp: ENST00000372217.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7053
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2813
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3141
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln142Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

1-45216228-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216228
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216228
    reference: chr 1
allele count: 1
allele frequency: 8.593870851308846e-6
allele num: 116362
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.431C>T
  hgvsp: ENSP00000361298.4:p.Ser144Leu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.431C>T
  hgvsp: ENSP00000410346.1:p.Ser144Leu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.753C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.269C>T
  hgvsp: ENSP00000361291.1:p.Ser90Leu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.539C>T
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.92C>T
  hgvsp: ENSP00000361296.3:p.Ser31Leu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.404C>T
  hgvsp: ENSP00000395050.1:p.Ser135Leu
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.431C>T
  hgvsp: ENSP00000361292.4:p.Ser144Leu
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser144Leu
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

1-45216229-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45216229
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45216229
    reference: chr 1
allele count: 1
allele frequency: 8.601262665359275e-6
allele num: 116262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361291
  ensembl transcript: ENST00000372217
  gene symbol: KIF2C
  hgvsc: ENST00000372217.1:c.270A>G
  hgvsp: ENST00000372217.1:c.270A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000493027
  gene symbol: KIF2C
  hgvsc: ENST00000493027.1:n.540A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000410346
  ensembl transcript: ENST00000452259
  gene symbol: KIF2C
  hgvsc: ENST00000452259.1:c.432A>G
  hgvsp: ENST00000452259.1:c.432A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000395050
  ensembl transcript: ENST00000455186
  gene symbol: KIF2C
  hgvsc: ENST00000455186.1:c.405A>G
  hgvsp: ENST00000455186.1:c.405A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142945
  ensembl transcript: ENST00000480574
  gene symbol: KIF2C
  hgvsc: ENST00000480574.1:n.754A>G
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361298
  ensembl transcript: ENST00000372224
  gene symbol: KIF2C
  hgvsc: ENST00000372224.4:c.432A>G
  hgvsp: ENST00000372224.4:c.432A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361296
  ensembl transcript: ENST00000372222
  gene symbol: KIF2C
  hgvsc: ENST00000372222.3:c.93A>G
  hgvsp: ENST00000372222.3:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142945
  ensembl protein: ENSP00000361292
  ensembl transcript: ENST00000372218
  gene symbol: KIF2C
  hgvsc: ENST00000372218.4:c.432A>G
  hgvsp: ENST00000372218.4:c.432A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6393
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser144Ser
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3849
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9008
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3560
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4612
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10095
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495190146543199e-5
allele num: 66738
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.045984e6

MQRankSum
type: SiteQuality
SIO_000300: 8.45e-1

MQ
type: SiteQuality
SIO_000300: 5.83e1

FS
type: SiteQuality
SIO_000300: 4.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.901e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

GenotypeQuality
all individuals: 4612
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3558
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9009
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2132
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.09e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.97e-1

DP
type: SiteQuality
SIO_000300: 2.046218e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.44e-1

QD
type: SiteQuality
SIO_000300: 1.378e1

MQ
type: SiteQuality
SIO_000300: 5.9e1

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25615
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3558
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4612
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10093
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2132
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.378e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.97e-1

MQ
type: SiteQuality
SIO_000300: 5.9e1

DP
type: SiteQuality
SIO_000300: 2.046218e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.09e-1

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25616
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4609
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3850
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2132
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.803e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.094e0

DP
type: SiteQuality
SIO_000300: 2.045917e6

QD
type: SiteQuality
SIO_000300: 1.273e1

GenotypeQuality
all individuals: 2132
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3847
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10091
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25618
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3560
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9006
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.045967e6

QD
type: SiteQuality
SIO_000300: 1.731e1

VQSLOD
type: SiteQuality
SIO_000300: -1.743e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

MQ
type: SiteQuality
SIO_000300: 5.816e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.085e0

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 7.57e-1

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3561
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10090
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3847
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25613
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9007
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2133
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.75e-1

QD
type: SiteQuality
SIO_000300: 1.305e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.68e-1

FS
type: SiteQuality
SIO_000300: 1.946e0

MQ
type: SiteQuality
SIO_000300: 5.825e1

VQSLOD
type: SiteQuality
SIO_000300: -1.828e0

DP
type: SiteQuality
SIO_000300: 2.045922e6

MQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

GenotypeQuality
all individuals: 9005
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3561
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25614
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2132
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3847
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4607
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10094
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.845e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

QD
type: SiteQuality
SIO_000300: 1.17e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

MQRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.297e-1

FS
type: SiteQuality
SIO_000300: 4.157e0

DP
type: SiteQuality
SIO_000300: 2.046263e6

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3847
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3561
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10094
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2132
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.622140050843541e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.297e-1

MQ
type: SiteQuality
SIO_000300: 5.845e1

QD
type: SiteQuality
SIO_000300: 1.17e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

FS
type: SiteQuality
SIO_000300: 4.157e0

MQRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.25e-1

DP
type: SiteQuality
SIO_000300: 2.046263e6

GenotypeQuality
all individuals: 8998
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25597
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4599
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10133
bin: 9.75e1
variant carriers: 68

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.183137525915688e-4
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 58
allele frequency: 8.690700949983517e-4
allele num: 66738
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

MQ
type: SiteQuality
SIO_000300: 5.902e1

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

QD
type: SiteQuality
SIO_000300: 1.287e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.29e0

DP
type: SiteQuality
SIO_000300: 2.049773e6

GenotypeQuality
all individuals: 9009
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3556
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2134
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3847
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25614
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10083
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.781e0

DP
type: SiteQuality
SIO_000300: 2.045927e6

VQSLOD
type: SiteQuality
SIO_000300: 7.02e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.39e-1

QD
type: SiteQuality
SIO_000300: 1.114e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e0

GenotypeQuality
all individuals: 2134
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25596
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10082
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9012
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3552
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4606
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1804
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3842
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.799e0

MQRankSum
type: SiteQuality
SIO_000300: -5.91e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

VQSLOD
type: SiteQuality
SIO_000300: -5.684e-1

DP
type: SiteQuality
SIO_000300: 2.045915e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.63e-1

QD
type: SiteQuality
SIO_000300: 1.504e1

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25474
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4600
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1800
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3836
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3553
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

African
type: Population
allele count: 35
allele frequency: 3.366031929217157e-3
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.04634e6

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.931e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.81e0

QD
type: SiteQuality
SIO_000300: 1.39e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10080
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25313
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1800
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4601
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3832
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.238e1

DP
type: SiteQuality
SIO_000300: 2.044011e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.931e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.785e0

VQSLOD
type: SiteQuality
SIO_000300: 3.68e-1

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3832
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25279
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10079
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3555
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1799
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4601
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.526e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.994e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.2e-1

DP
type: SiteQuality
SIO_000300: 2.043713e6

GenotypeQuality
all individuals: 10067
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 607
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2129
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3528
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3679
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21036
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4517
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.326e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.69e1

MQRankSum
type: SiteQuality
SIO_000300: -1.425e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.99e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.252e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 2.010492e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.429999999999999e-1

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4502
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1178
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3519
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3650
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20646
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505298651252408e-5
allele num: 66432
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.52e-1

DP
type: SiteQuality
SIO_000300: 2.004561e6

FS
type: SiteQuality
SIO_000300: 1.202e0

MQRankSum
type: SiteQuality
SIO_000300: -8.54e-1

QD
type: SiteQuality
SIO_000300: 9.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-2

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3640
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4475
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10076
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 1347
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3506
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66420
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 9.110787172011661e-4
allele num: 16464
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.602811035918792e-4
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.947e0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 1.709e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

DP
type: SiteQuality
SIO_000300: 2.001611e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

GenotypeQuality
all individuals: 297
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3506
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3640
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1347
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4475
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10076
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20357
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505570611261668e-5
allele num: 66420
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.947e0

FS
type: SiteQuality
SIO_000300: 1.709e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

DP
type: SiteQuality
SIO_000300: 2.001611e6

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.94e1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10059
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1398
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3638
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3502
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7868
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4478
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.895752895752896e-4
allele num: 10360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

QD
type: SiteQuality
SIO_000300: 1.387e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.54e0

FS
type: SiteQuality
SIO_000300: 5.95e0

DP
type: SiteQuality
SIO_000300: 1.995789e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.64e-1

GenotypeQuality
all individuals: 3543
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2141
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4264
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1561
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5378
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25958
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4701
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 634
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2058
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.611084259706783e-5
allele num: 62070
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15892
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

FS
type: SiteQuality
SIO_000300: 4.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 1.600898e6

MQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

QD
type: SiteQuality
SIO_000300: 1.342e1

GenotypeQuality
all individuals: 2002
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1080
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1458
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1907
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3507
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 3
allele frequency: 3.416856492027335e-3
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

South Asian
type: Population
allele count: 24
allele frequency: 1.511335012594458e-3
allele num: 15880
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.282e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

DP
type: SiteQuality
SIO_000300: 1.609784e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

GenotypeQuality
all individuals: 2352
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5519
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1936
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3237
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4709
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 468
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15892
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.548467017652524e-4
allele num: 6458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.090838908903757e-4
allele num: 62176
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 1.235e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

DP
type: SiteQuality
SIO_000300: 1.614128e6

GenotypeQuality
all individuals: 949
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1063
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5184
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1448
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3484
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34565
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.600819619645258e-5
allele num: 62468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15882
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.655932e6

VQSLOD
type: SiteQuality
SIO_000300: -2.857e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 8.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.606e0

MQRankSum
type: SiteQuality
SIO_000300: 7.11e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.55e-1

GenotypeQuality
all individuals: 1068
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35442
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5094
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1990
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4696
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11002
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.291682395872656e-5
allele num: 15894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8024
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62588
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.66e0

FS
type: SiteQuality
SIO_000300: 6.897e0

DP
type: SiteQuality
SIO_000300: 1.661755e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.549e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.484e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

GenotypeQuality
all individuals: 4696
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3585
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1586
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37356
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1070
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11024
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.229105211406096e-4
allele num: 8136
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62844
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.622e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.46e1

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 1.677022e6

FS
type: SiteQuality
SIO_000300: 1.385e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.101e0

GenotypeQuality
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4703
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 626
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38963
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.584836286411614e-5
allele num: 63098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 6.063055780113178e-4
allele num: 9896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

FS
type: SiteQuality
SIO_000300: 5.851e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

DP
type: SiteQuality
SIO_000300: 1.69529e6

MQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

QD
type: SiteQuality
SIO_000300: 1.057e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

GenotypeQuality
all individuals: 397
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1077
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1058
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39304
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 997
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4698
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.168166265365607e-5
allele num: 63128
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15888
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.099e0

QD
type: SiteQuality
SIO_000300: 1.454e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.91e-1

DP
type: SiteQuality
SIO_000300: 1.697438e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 628
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3627
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1063
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39588
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 393
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4772
bin: 9.75e1
variant carriers: 84

GenotypeQuality
all individuals: 4580
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.520795660036166e-4
allele num: 11060
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.423654871546292e-4
allele num: 8252
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.133786848072562e-3
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 63
allele frequency: 9.974035843201823e-4
allele num: 63164
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.039587962027873e-4
allele num: 9902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.082614056720099e-4
allele num: 6488
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 6.922592825676526e-4
allele num: 15890
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.69805e6

VQSLOD
type: SiteQuality
SIO_000300: 5.73e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.216e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.273e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

GenotypeQuality
all individuals: 68
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4665
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3590
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15836
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.02552157180474e-4
allele num: 9874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11040
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.543686322939179e-4
allele num: 6478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.585640440173786e-5
allele num: 63066
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.374e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.14e-1

DP
type: SiteQuality
SIO_000300: 1.701803e6

VQSLOD
type: SiteQuality
SIO_000300: 2.28e0

GenotypeQuality
all individuals: 1391
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7817
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36486
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.623956607879438e-5
allele num: 61578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

FS
type: SiteQuality
SIO_000300: 5.18e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 1.206e1

DP
type: SiteQuality
SIO_000300: 1.653184e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.04e-1

GenotypeQuality
all individuals: 241
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9867
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4692
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3095
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33212
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.646469968387776e-5
allele num: 60736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7992
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.5e-1

FS
type: SiteQuality
SIO_000300: 4.408e0

VQSLOD
type: SiteQuality
SIO_000300: -1.845e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.612631e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

QD
type: SiteQuality
SIO_000300: 4.7e0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

GenotypeQuality
all individuals: 385
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24126
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14436
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4691
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9222
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.298026998961578e-4
allele num: 7704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59080
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.811e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

VQSLOD
type: SiteQuality
SIO_000300: -2.319e-1

DP
type: SiteQuality
SIO_000300: 1.505291e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
all individuals: 1756
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3810
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2395
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24578
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4691
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.693881699302121e-5
allele num: 59036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.504936e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 2.831e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.021e0

QD
type: SiteQuality
SIO_000300: 1.75e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.306e0

GenotypeQuality
all individuals: 209
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16698
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4691
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4730
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.719690455717971e-5
allele num: 58150
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14924
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6142
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.417806e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

FS
type: SiteQuality
SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 1.109e1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 5941
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4730
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17786
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16698
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.719690455717971e-5
allele num: 58150
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14924
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.109e1

VQSLOD
type: SiteQuality
SIO_000300: 7.3e-1

FS
type: SiteQuality
SIO_000300: 1.78e0

DP
type: SiteQuality
SIO_000300: 1.417806e6

GenotypeQuality
all individuals: 573
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16858
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12926
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1756
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.118568232662192e-4
allele num: 8940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6090
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.66e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 1.535e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

QD
type: SiteQuality
SIO_000300: 1.13e1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

DP
type: SiteQuality
SIO_000300: 1.370158e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1278
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7755
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1634
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5474
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4902
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11463
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4691
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8868
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.357773251866938e-4
allele num: 14730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6074
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.102e1

QD
type: SiteQuality
SIO_000300: 1.755e1

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 1.347396e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

GenotypeQuality
all individuals: 601
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4690
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 15882
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6011
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8414
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1911
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.611933829372246e-5
allele num: 55372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.271e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 1.310616e6

VQSLOD
type: SiteQuality
SIO_000300: 4.23e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.01e-1

QD
type: SiteQuality
SIO_000300: 1.035e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

GenotypeQuality
all individuals: 1249
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8579
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3436
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2407
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2074
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3975
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1805
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5826
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.468275245755138e-4
allele num: 6714
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

QD
type: SiteQuality
SIO_000300: 1.236e1

DP
type: SiteQuality
SIO_000300: 1.283224e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.142e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.87e-1

GenotypeQuality
all individuals: 1624
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1886
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3367
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34028
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1833
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3705
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.074113856068743e-4
allele num: 9310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.866830296736838e-5
allele num: 63558
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.64e-1

QD
type: SiteQuality
SIO_000300: 1.067e1

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.431e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
SIO_000300: 2.695637e6

GenotypeQuality
all individuals: 3944
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1833
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34024
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1626
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.991623454327882e-4
allele num: 10028
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 2.696441e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 1.114e0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 1.441e1

MQRankSum
type: SiteQuality
SIO_000300: 5.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.283e0

GenotypeQuality
all individuals: 646
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2652
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2800
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34025
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4325
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.572623765490344e-5
allele num: 63588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10038
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9364
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.01e-1

QD
type: SiteQuality
SIO_000300: 1.242e1

DP
type: SiteQuality
SIO_000300: 2.70056e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.67e-1

FS
type: SiteQuality
SIO_000300: 1.111e0

MQRankSum
type: SiteQuality
SIO_000300: 8.27e-1

GenotypeQuality
all individuals: 34025
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 490
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1969
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3367
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1636
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3124
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2803
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.722958827634333e-5
allele num: 11464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.21e-1

QD
type: SiteQuality
SIO_000300: 1.167e1

DP
type: SiteQuality
SIO_000300: 2.701592e6

GenotypeQuality
all individuals: 1820
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2762
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 205
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 358
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4202
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3100
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1419
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33926
bin: 9.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 8.206811653672548e-4
allele num: 9748
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.74542223350576e-4
allele num: 63022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

QD
type: SiteQuality
SIO_000300: 7.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.062e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.35e0

DP
type: SiteQuality
SIO_000300: 2.704623e6

FS
type: SiteQuality
SIO_000300: 6.2518e1

MQ
type: SiteQuality
SIO_000300: 5.873e1

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.688e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e0

GenotypeQuality
all individuals: 1831
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 91
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3125
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3735
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2803
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1639
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10004
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.743071291615827e-4
allele num: 11474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.932459276916965e-5
allele num: 10068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.701418e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.71e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 1.332e1

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3127
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1664
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3868
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4836
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3360
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1833
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33996
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2808
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.567054251418184e-5
allele num: 63814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.081e0

DP
type: SiteQuality
SIO_000300: 2.705546e6

VQSLOD
type: SiteQuality
SIO_000300: -8.66e-2

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.6e0

MQRankSum
type: SiteQuality
SIO_000300: -1.197e0

QD
type: SiteQuality
SIO_000300: 1.11e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.53e-1

GenotypeQuality
all individuals: 420
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3925
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2737
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3127
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1833
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3362
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2807
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33995
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.712319219376198e-5
allele num: 11478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63892
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.196e0

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQ
type: SiteQuality
SIO_000300: 5.971e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e0

VQSLOD
type: SiteQuality
SIO_000300: -4.4e-2

DP
type: SiteQuality
SIO_000300: 2.708911e6

QD
type: SiteQuality
SIO_000300: 1.319e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.054e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.218e0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1834
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3132
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33998
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5390
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1663
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3364
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560208443848098e-5
allele num: 64094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.336e0

QD
type: SiteQuality
SIO_000300: 2.126e1

MQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 8.337e0

DP
type: SiteQuality
SIO_000300: 2.716209e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.045e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

GenotypeQuality
all individuals: 3769
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1667
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1833
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33997
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3364
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3132
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5527
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64172
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10984
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

QD
type: SiteQuality
SIO_000300: 5.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.746e0

FS
type: SiteQuality
SIO_000300: 2.168e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 2.719859e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.253e0

GenotypeQuality
all individuals: 33999
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5875
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1831
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2812
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2814
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1684
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552409339294585e-5
allele num: 64416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.329916123019571e-4
allele num: 8584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.31e-1

DP
type: SiteQuality
SIO_000300: 2.727757e6

QD
type: SiteQuality
SIO_000300: 1.234e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.83e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 5.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2880
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3151
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33997
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2823
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7359
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.483511379470506e-4
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.335e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

DP
type: SiteQuality
SIO_000300: 2.751057e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2903
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3363
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3153
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33997
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.086e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

QD
type: SiteQuality
SIO_000300: 1.355e1

FS
type: SiteQuality
SIO_000300: 2.55e0

DP
type: SiteQuality
SIO_000300: 2.754128e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2011
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2833
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33998
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3154
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.1571714858288e-5
allele num: 13972
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.921e1

VQSLOD
type: SiteQuality
SIO_000300: 4.13e-1

DP
type: SiteQuality
SIO_000300: 2.759719e6

FS
type: SiteQuality
SIO_000300: 5.331e0

QD
type: SiteQuality
SIO_000300: 1.332e1

MQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.34e0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9117
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1723
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3015
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3365
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2846
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515978412467406e-5
allele num: 65964
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15190
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.986e0

MQRankSum
type: SiteQuality
SIO_000300: -4.89e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

QD
type: SiteQuality
SIO_000300: 1.706e1

VQSLOD
type: SiteQuality
SIO_000300: 2.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.776419e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.0e-2

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3162
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3043
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2853
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33997
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66070
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.931247585940518e-4
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

QD
type: SiteQuality
SIO_000300: 1.441e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 2.780397e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.75e-1

GenotypeQuality
all individuals: 1718
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2857
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33995
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3047
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92975685063682e-4
allele num: 10364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66090
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.78116e6

VQSLOD
type: SiteQuality
SIO_000300: -1.222e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.224e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.79e0

GenotypeQuality
all individuals: 1724
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3059
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3367
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1840
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2861
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511715797430083e-5
allele num: 66150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

DP
type: SiteQuality
SIO_000300: 2.781892e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.28e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

FS
type: SiteQuality
SIO_000300: 2.439e0

QD
type: SiteQuality
SIO_000300: 1.31e1

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3165
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9472
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3365
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66162
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.40861317610869e-5
allele num: 15604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.427e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.782225e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.428e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
all individuals: 816
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2863
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3364
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9451
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34000
bin: 9.75e1
variant carriers: 11

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.384880602732729e-4
allele num: 15662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511121856866538e-5
allele num: 66176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.202e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.783163e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1837
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9482
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33992
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1726
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3364
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.043026347594876e-5
allele num: 66192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.783193e6

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.417e1

MQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.42e-1

FS
type: SiteQuality
SIO_000300: 5.570000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33990
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 807
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2864
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1837
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9481
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511076188461422e-5
allele num: 66178
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

DP
type: SiteQuality
SIO_000300: 2.783313e6

FS
type: SiteQuality
SIO_000300: 3.899e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.251e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.903e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.099e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 87
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3109
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9257
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3366
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1836
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2861
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66166
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.58e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.284e0

MQRankSum
type: SiteQuality
SIO_000300: 4.77e-1

DP
type: SiteQuality
SIO_000300: 2.782583e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3363
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1836
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33987
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2863
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9188
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15656
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.959e0

QD
type: SiteQuality
SIO_000300: 1.223e1

VQSLOD
type: SiteQuality
SIO_000300: 2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.678e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.498e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.781753e6

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1053
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9015
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33990
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1725
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3098
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3150
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1835
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.764057896759318e-4
allele num: 15614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.44e-1

DP
type: SiteQuality
SIO_000300: 2.780883e6

QD
type: SiteQuality
SIO_000300: 1.297e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 2864
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7248
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3364
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.801810164771409e-4
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.756443e6

VQSLOD
type: SiteQuality
SIO_000300: 9.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.244e1

MQRankSum
type: SiteQuality
SIO_000300: 4.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.886e0

GenotypeQuality
all individuals: 2850
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3364
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3140
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33978
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6994
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1683
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524762137106611e-5
allele num: 65584
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.075137965190322e-5
allele num: 14134
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.43e-1

FS
type: SiteQuality
SIO_000300: 1.2444e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.885999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.751509e6

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.135e1

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3058
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3142
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33979
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6596
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1683
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1834
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3363
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2826
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.443209698369173e-4
allele num: 13858
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

FS
type: SiteQuality
SIO_000300: 1.222e0

DP
type: SiteQuality
SIO_000300: 2.744522e6

MQRankSum
type: SiteQuality
SIO_000300: 5.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.46e-1

QD
type: SiteQuality
SIO_000300: 1.177e1

GenotypeQuality
all individuals: 376
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3058
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3363
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1683
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33979
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6596
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1834
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.582111436950147e-5
allele num: 65472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 1.222e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.94e-1

DP
type: SiteQuality
SIO_000300: 2.744522e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.177e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

GenotypeQuality
all individuals: 235
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3363
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2823
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1680
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1834
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33976
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6444
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13646
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529192280637367e-5
allele num: 65394
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.308e0

MQRankSum
type: SiteQuality
SIO_000300: -1.937e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 2.741252e6

VQSLOD
type: SiteQuality
SIO_000300: -3.125e-1

FS
type: SiteQuality
SIO_000300: 8.100000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.685e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.147e1

GenotypeQuality
all individuals: 3362
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3457
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2791
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5914
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2820
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33976
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532848953064165e-5
allele num: 65238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.541e0

FS
type: SiteQuality
SIO_000300: 4.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.7e-2

DP
type: SiteQuality
SIO_000300: 2.733455e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.169e1