7-128415882-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128415882
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128415882
    reference: chr 7
allele count: 1
allele frequency: 1.116270762636185e-5
allele num: 89584
alternate allele: T
canonical: true
consequence: upstream gene
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 10
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 546
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 14238
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4946
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7474
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 706
  num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD

7-128415884-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128415884
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128415884
    reference: chr 7
allele count: 6
allele frequency: 6.784413939709175e-5
allele num: 88438
alternate allele: A
canonical: true
consequence: upstream gene
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 164
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  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 704
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4890
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 14128
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7276
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/7-128415889-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128415889
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128415889
    reference: chr 7
allele count: 1
allele frequency: 1.194514788093077e-5
allele num: 83716
alternate allele: A
canonical: true
consequence: upstream gene
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 5131
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5312
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
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  allele num: 6656
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6574
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4682
  num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum

7-128431499-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128431499
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128431499
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 1096
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-283C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.-49C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-93+469C>G
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5745
  bin: 2.5e0
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genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

7-128431555-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128431555
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128431555
    reference: chr 7
allele count: 1
allele frequency: 2.890173410404624e-3
allele num: 346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.8C>T
  hgvsp: ENSP00000367956.4:p.Ala3Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-93+525C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-193C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.8C>T
  hgvsp: ENSP00000419515.1:p.Ala3Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-227C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4436
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala3Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-128431577-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128431577
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128431577
    reference: chr 7
allele count: 1
allele frequency: 2.793296089385475e-3
allele num: 358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.30A>C
  hgvsp: ENST00000378685.4:c.30A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.30A>C
  hgvsp: ENST00000464832.1:c.30A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-205A>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-93+547A>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-171A>C
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3982
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 1
hgvs: p.Gly10Gly
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

7-128431591-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128431591
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128431591
    reference: chr 7
allele count: 1
allele frequency: 1.041666666666667e-3
allele num: 960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-157G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-191G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.44G>A
  hgvsp: ENSP00000419515.1:p.Ser15Asn
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.44G>A
  hgvsp: ENSP00000367956.4:p.Ser15Asn
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-93+561G>A
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser15Asn
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff

7-128432326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432326
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432326
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 16570
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.59-48C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-92-48C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-140C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-92-48C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-92-48C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-140C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-140C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.59-48C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31885
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15555
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5797
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22185
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6753
  bin: 1.25e1
  variant carriers: 1
hgvs: c.-140C>T
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

7-128432327-G-GCAGCCAGCCCCCCACCCCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432327
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432346
    reference: chr 7
allele count: 1
allele frequency: 6.022645145748013e-5
allele num: 16604
alternate allele: GCAGCCAGCCCCCCACCCCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: 5' UTR
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2857
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23270
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4653
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

7-128432334-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432334
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432335
    reference: chr 7
allele count: 2
allele frequency: 1.110864252388358e-4
allele num: 18004
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-92-34dupC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.59-34dupC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-126dupC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.59-34dupC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-92-34dupC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-126dupC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-92-34dupC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-126dupC
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24807
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2256
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21957
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3154
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

7-128432340-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432340
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432340
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 22168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-126C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-92-34C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-92-34C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-92-34C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.59-34C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-126C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-126C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.59-34C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 17409
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30153
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1586
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27399
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1237
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4607
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/7-128432341-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432341
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432340
    reference: chr 7
allele count: 1
allele frequency: 4.515080368430558e-5
allele num: 22148
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-119delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.59-27delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-119delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-119delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.59-27delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-92-27delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-92-27delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-92-27delC
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: 5' UTR
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15905
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30848
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27690
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1987
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: AC
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

7-128432342-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432342
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432342
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 23842
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-124C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-124C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-92-32C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-92-32C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-92-32C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-124C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.59-32C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.59-32C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 31493
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14890
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28292
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

7-128432345-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432345
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432345
    reference: chr 7
allele count: 7
allele frequency: 2.48103778266109e-4
allele num: 28214
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-92-29C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-121C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.59-29C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-121C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-92-29C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-92-29C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-121C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.59-29C>G
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11372
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33736
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31549
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11004
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5980
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-128432346-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432346
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432346
    reference: chr 7
allele count: 1
allele frequency: 3.411572052401747e-5
allele num: 29312
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-120C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.59-28C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-92-28C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-92-28C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-120C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-92-28C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-120C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.59-28C>G
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5647
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10363
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6432
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2423
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ

7-128432347-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432347
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432347
    reference: chr 7
allele count: 1
allele frequency: 3.255208333333333e-5
allele num: 30720
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-92-27C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-119C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-119C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.59-27C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-92-27C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-119C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-92-27C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.59-27C>G
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5713
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33013
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7023
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-128432348-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432348
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432348
    reference: chr 7
allele count: 1
allele frequency: 3.104240392375986e-5
allele num: 32214
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-92-26A>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-118A>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-92-26A>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-118A>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.59-26A>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.59-26A>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-118A>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-92-26A>C
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7938
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7599
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7913
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

7-128432349-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432349
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432349
    reference: chr 7
allele count: 1
allele frequency: 2.927914739122797e-5
allele num: 34154
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-92-25G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.59-25G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-117G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-117G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-117G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-92-25G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-92-25G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.59-25G>C
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34887
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7098
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2234
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8118
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

7-128432350-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432350
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432350
    reference: chr 7
allele count: 1
allele frequency: 2.714146129627619e-5
allele num: 36844
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-92-24C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.59-24C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.59-24C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-116C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-116C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-92-24C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-116C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-92-24C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34587
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1210
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8896
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2513
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

7-128432377-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432377
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432377
    reference: chr 7
allele count: 1
allele frequency: 9.820095844135438e-6
allele num: 101832
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-89C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-89C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.62C>T
  hgvsp: ENSP00000367956.4:p.Pro21Leu
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-89C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.62C>T
  hgvsp: ENSP00000419515.1:p.Pro21Leu
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-89C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-89C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-89C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8846
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8810
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4884
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro21Leu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ

7-128432382-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432382
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432382
    reference: chr 7
allele count: 1
allele frequency: 9.318622334874013e-6
allele num: 107312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-84G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.67G>A
  hgvsp: ENSP00000419515.1:p.Val23Met
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-84G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-84G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-84G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-84G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-84G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.67G>A
  hgvsp: ENSP00000367956.4:p.Val23Met
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1288
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val23Met
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

7-128432386-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432386
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432386
    reference: chr 7
allele count: 2
allele frequency: 1.821062407808715e-5
allele num: 109826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-80C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-80C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.71C>T
  hgvsp: ENSP00000367956.4:p.Thr24Ile
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-80C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.71C>T
  hgvsp: ENSP00000419515.1:p.Thr24Ile
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-80C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-80C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-80C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr24Ile
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

7-128432391-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432391
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432391
    reference: chr 7
allele count: 5
allele frequency: 4.452201168257586e-5
allele num: 112304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.76C>G
  hgvsp: ENSP00000367956.4:p.Leu26Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-75C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-75C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-75C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.76C>G
  hgvsp: ENSP00000419515.1:p.Leu26Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-75C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-75C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-75C>G
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8575
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42949
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu26Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

7-128432392-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432392
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432392
    reference: chr 7
allele count: 1
allele frequency: 8.862891075068688e-6
allele num: 112830
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-74T>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-74T>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-74T>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-74T>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-74T>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.77T>G
  hgvsp: ENSP00000419515.1:p.Leu26Arg
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-74T>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.77T>G
  hgvsp: ENSP00000367956.4:p.Leu26Arg
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43156
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3756
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu26Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

7-128432406-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432406
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432406
    reference: chr 7
allele count: 1
allele frequency: 8.58663918942126e-6
allele num: 116460
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-60G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-60G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.91G>T
  hgvsp: ENSP00000367956.4:p.Ala31Ser
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-60G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.91G>T
  hgvsp: ENSP00000419515.1:p.Ala31Ser
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-60G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-60G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-60G>T
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9531
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1440
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala31Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

7-128432411-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432411
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432411
    reference: chr 7
allele count: 2
allele frequency: 1.705640553309795e-5
allele num: 117258
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-55C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-55C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-55C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-55C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-55C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.96C>G
  hgvsp: ENST00000378685.4:c.96C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.96C>G
  hgvsp: ENST00000464832.1:c.96C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-55C>G
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44466
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6091
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser32Ser
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum

7-128432412-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432412
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432412
    reference: chr 7
allele count: 1
allele frequency: 8.513246611727849e-6
allele num: 117464
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-54G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-54G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-54G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-54G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.97G>C
  hgvsp: ENSP00000419515.1:p.Glu33Gln
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.97G>C
  hgvsp: ENSP00000367956.4:p.Glu33Gln
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-54G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-54G>C
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9733
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu33Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

7-128432414-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432414
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432414
    reference: chr 7
allele count: 31
allele frequency: 2.63233870556867e-4
allele num: 117766
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-52G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.99G>A
  hgvsp: ENST00000464832.1:c.99G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-52G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-52G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.99G>A
  hgvsp: ENST00000378685.4:c.99G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-52G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-52G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-52G>A
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 9.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu33Glu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

7-128432416-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432416
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432416
    reference: chr 7
allele count: 4
allele frequency: 3.391152483171406e-5
allele num: 117954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-50G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-50G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-50G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-50G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-50G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-50G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.101G>A
  hgvsp: ENSP00000419515.1:p.Gly34Asp
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.101G>A
  hgvsp: ENSP00000367956.4:p.Gly34Asp
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly34Asp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ

7-128432428-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432428
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432428
    reference: chr 7
allele count: 1
allele frequency: 8.421761832575375e-6
allele num: 118740
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-38A>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.113A>G
  hgvsp: ENSP00000419515.1:p.Lys38Arg
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-38A>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-38A>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-38A>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.113A>G
  hgvsp: ENSP00000367956.4:p.Lys38Arg
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-38A>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-38A>G
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48252
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6223
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1475
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys38Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

7-128432430-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432430
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432430
    reference: chr 7
allele count: 1
allele frequency: 8.414816809438059e-6
allele num: 118838
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.115A>T
  hgvsp: ENSP00000367956.4:p.Lys39Ter
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-36A>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-36A>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.115A>T
  hgvsp: ENSP00000419515.1:p.Lys39Ter
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-36A>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-36A>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-36A>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-36A>T
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10075
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys39Ter
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

7-128432434-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432434
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432434
    reference: chr 7
allele count: 1
allele frequency: 8.406045628015669e-6
allele num: 118962
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.119G>A
  hgvsp: ENSP00000419515.1:p.Gly40Asp
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-32G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-32G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.119G>A
  hgvsp: ENSP00000367956.4:p.Gly40Asp
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48309
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly40Asp
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

7-128432442-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432442
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432443
    reference: chr 7
allele count: 1
allele frequency: 8.405480373203328e-6
allele num: 118970
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-19dupG
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-19dupG
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-19dupG
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.132dupG
  hgvsp: ENSP00000367956.4:p.Ser45ValfsTer21
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.132dupG
  hgvsp: ENSP00000419515.1:p.Ser45ValfsTer21
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-19dupG
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-19dupG
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-19dupG
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6211
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser45ValfsTer21
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

7-128432446-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432446
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432446
    reference: chr 7
allele count: 1
allele frequency: 8.401384548173538e-6
allele num: 119028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-20G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-20G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-20G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-20G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.131G>A
  hgvsp: ENSP00000419515.1:p.Gly44Glu
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-20G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.131G>A
  hgvsp: ENSP00000367956.4:p.Gly44Glu
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-20G>A
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1016
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6210
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly44Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

7-128432446-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432446
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432446
    reference: chr 7
allele count: 67
allele frequency: 5.628927647276271e-4
allele num: 119028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.131G>T
  hgvsp: ENSP00000419515.1:p.Gly44Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-20G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-20G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.131G>T
  hgvsp: ENSP00000367956.4:p.Gly44Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-20G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-20G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-20G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-20G>T
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44741
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10162
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1016
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6210
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly44Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum

7-128432447-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432447
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432447
    reference: chr 7
allele count: 1
allele frequency: 8.40180806909647e-6
allele num: 119022
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.132G>C
  hgvsp: ENST00000378685.4:c.132G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-19G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-19G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-19G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-19G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-19G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.132G>C
  hgvsp: ENST00000464832.1:c.132G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-19G>C
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6223
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly44Gly
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

7-128432449-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432449
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432449
    reference: chr 7
allele count: 1
allele frequency: 8.404067568703253e-6
allele num: 118990
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.134C>G
  hgvsp: ENSP00000419515.1:p.Ser45Cys
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-17C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-17C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.134C>G
  hgvsp: ENSP00000367956.4:p.Ser45Cys
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-17C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-17C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-17C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-17C>G
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48254
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser45Cys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD

7-128432450-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432450
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432450
    reference: chr 7
allele count: 1
allele frequency: 8.407035006893769e-6
allele num: 118948
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-16C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-16C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.135C>G
  hgvsp: ENST00000464832.1:c.135C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-16C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.135C>G
  hgvsp: ENST00000378685.4:c.135C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-16C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-16C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-16C>G
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6218
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48148
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser45Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

7-128432452-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432452
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432452
    reference: chr 7
allele count: 6
allele frequency: 5.045323825700879e-5
allele num: 118922
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-14T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.137T>C
  hgvsp: ENSP00000419515.1:p.Leu46Pro
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.137T>C
  hgvsp: ENSP00000367956.4:p.Leu46Pro
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-14T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-14T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-14T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-14T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-14T>C
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10181
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1468
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6207
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48185
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu46Pro
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

7-128432460-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432460
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432460
    reference: chr 7
allele count: 1
allele frequency: 8.427297702718647e-6
allele num: 118662
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.-6C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.-6C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.-6C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.-6C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.-6C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.145C>T
  hgvsp: ENSP00000367956.4:p.Arg49Trp
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.145C>T
  hgvsp: ENSP00000419515.1:p.Arg49Trp
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.-6C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg49Trp
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

7-128432466-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432466
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432466
    reference: chr 7
allele count: 1
allele frequency: 8.461955050094773e-6
allele num: 118176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.151A>T
  hgvsp: ENSP00000419515.1:p.Met51Leu
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.1A>T
  hgvsp: ENSP00000418838.2:p.Met1?
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.1A>T
  hgvsp: ENSP00000417209.1:p.Met1?
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.1A>T
  hgvsp: ENSP00000420509.1:p.Met1?
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.151A>T
  hgvsp: ENSP00000367956.4:p.Met51Leu
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.1A>T
  hgvsp: ENSP00000297788.4:p.Met1?
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.1A>T
  hgvsp: ENSP00000417708.1:p.Met1?
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.1A>T
  hgvsp: ENSP00000418042.1:p.Met1?
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6101
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

7-128432467-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432467
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432467
    reference: chr 7
allele count: 2
allele frequency: 1.692476940001693e-5
allele num: 118170
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.152T>C
  hgvsp: ENSP00000367956.4:p.Met51Thr
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.2T>C
  hgvsp: ENSP00000420509.1:p.Met1?
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.2T>C
  hgvsp: ENSP00000418838.2:p.Met1?
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.2T>C
  hgvsp: ENSP00000417209.1:p.Met1?
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.2T>C
  hgvsp: ENSP00000418042.1:p.Met1?
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.2T>C
  hgvsp: ENSP00000417708.1:p.Met1?
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.2T>C
  hgvsp: ENSP00000297788.4:p.Met1?
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.152T>C
  hgvsp: ENSP00000419515.1:p.Met51Thr
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47192
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

7-128432475-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432475
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432475
    reference: chr 7
allele count: 1
allele frequency: 8.510348583877996e-6
allele num: 117504
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.160A>G
  hgvsp: ENSP00000419515.1:p.Met54Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.10A>G
  hgvsp: ENSP00000418042.1:p.Met4Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.10A>G
  hgvsp: ENSP00000418838.2:p.Met4Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.10A>G
  hgvsp: ENSP00000417708.1:p.Met4Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.160A>G
  hgvsp: ENSP00000367956.4:p.Met54Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417209
  ensembl transcript: ENST00000472049
  gene symbol: CCDC136
  hgvsc: ENST00000472049.1:c.10A>G
  hgvsp: ENSP00000417209.1:p.Met4Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.10A>G
  hgvsp: ENSP00000297788.4:p.Met4Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.10A>G
  hgvsp: ENSP00000420509.1:p.Met4Val
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5965
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46228
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met4Val
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

7-128432487-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432487
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432487
    reference: chr 7
allele count: 1
allele frequency: 8.590327291469806e-6
allele num: 116410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.16+6T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.16+6T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.166+6T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.16+6T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.16+6T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.16+6T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.166+6T>C
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4022
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
hgvs: c.16+6T>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/7-128432492-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432492
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432492
    reference: chr 7
allele count: 3
allele frequency: 2.590270942340569e-5
allele num: 115818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.166+11C>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.16+11C>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.16+11C>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.16+11C>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.16+11C>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.166+11C>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.16+11C>A
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8446
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5770
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4576
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1296
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

7-128432493-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432493
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432493
    reference: chr 7
allele count: 1
allele frequency: 8.655460730174667e-6
allele num: 115534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.16+12C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.166+12C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.16+12C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.16+12C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.16+12C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.166+12C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.16+12C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43693
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5736
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

7-128432497-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432497
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432497
    reference: chr 7
allele count: 8
allele frequency: 6.944203326273393e-5
allele num: 115204
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.166+16A>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.16+16A>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.166+16A>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.16+16A>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.16+16A>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.16+16A>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.16+16A>G
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41271
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8179
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4948
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS

7-128432500-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432500
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432500
    reference: chr 7
allele count: 2
allele frequency: 1.743587955294405e-5
allele num: 114706
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.16+19C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.16+19C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.166+19C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.16+19C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.16+19C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.166+19C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.16+19C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40844
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42662
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

7-128432500-CTTCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432500
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432496
    reference: chr 7
allele count: 2
allele frequency: 1.743587955294405e-5
allele num: 114706
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.16+27_16+30delTTTC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.16+27_16+30delTTTC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.166+27_166+30delTTTC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.16+27_16+30delTTTC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.166+27_166+30delTTTC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.16+27_16+30delTTTC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.16+27_16+30delTTTC
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5066
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: CTTCT
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

7-128432515-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432515
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432514
    reference: chr 7
allele count: 2
allele frequency: 1.796977483872127e-5
allele num: 111298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.16+38delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.16+38delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.166+38delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.166+38delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.16+38delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.16+38delC
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.16+38delC
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4721
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: TC
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

7-128432516-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128432516
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128432516
    reference: chr 7
allele count: 2
allele frequency: 1.796654629080652e-5
allele num: 111318
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.16+35C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.16+35C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.166+35C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.16+35C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.16+35C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.16+35C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.166+35C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37042
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38151
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4815
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

7-128434282-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434282
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434282
    reference: chr 7
allele count: 9
allele frequency: 5.137572782281082e-4
allele num: 17518
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-120G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-120G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-120G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-120G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-120G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-120G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-120G>A
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5293
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

7-128434309-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434309
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434309
    reference: chr 7
allele count: 1
allele frequency: 5.485463521667581e-5
allele num: 18230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-93T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-93T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-93T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-93T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-93T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-93T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-93T>C
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5222
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8480
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum

7-128434312-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434312
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434312
    reference: chr 7
allele count: 1
allele frequency: 5.471656817684395e-5
allele num: 18276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-90C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-90C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-90C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-90C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-90C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-90C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-90C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11419
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2475
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5186
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

7-128434349-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434349
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434349
    reference: chr 7
allele count: 3
allele frequency: 1.503006012024048e-4
allele num: 19960
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-53C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-53C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-53C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-53C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-53C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-53C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-53C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1913
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

7-128434350-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434350
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434350
    reference: chr 7
allele count: 1
allele frequency: 4.991016170892394e-5
allele num: 20036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-52G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-52G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-52G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-52G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-52G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-52G>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-52G>A
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18539
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16680
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

7-128434350-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434350
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434350
    reference: chr 7
allele count: 1
allele frequency: 4.991016170892394e-5
allele num: 20036
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-52G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-52G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-52G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-52G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-52G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-52G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-52G>T
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18539
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1868
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16680
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

7-128434352-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434352
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434352
    reference: chr 7
allele count: 114
allele frequency: 5.653640150763737e-3
allele num: 20164
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-50C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-50C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-50C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-50C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-50C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-50C>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-50C>T
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19117
  bin: 2.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17203
  bin: 7.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6352
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 8.25e1
  variant carriers: 2
num of homozygotes: 1
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

7-128434365-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434365
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434365
    reference: chr 7
allele count: 46
allele frequency: 2.222866531361748e-3
allele num: 20694
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-37G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-37G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-37G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-37G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-37G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-37G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-37G>C
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22829
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4143
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2266
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20552
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD

7-128434367-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434367
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434367
    reference: chr 7
allele count: 7
allele frequency: 3.375446041084e-4
allele num: 20738
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-35T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-35T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-35T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-35T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-35T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-35T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-35T>C
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23307
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4179
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2441
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6630
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20848
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

7-128434381-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434381
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434381
    reference: chr 7
allele count: 2
allele frequency: 9.523809523809524e-5
allele num: 21000
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-21T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-21T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-21T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-21T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-21T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-21T>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-21T>C
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26800
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6719
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23545
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-128434389-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434389
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434389
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 21136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-13C>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-13C>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-13C>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-13C>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-13C>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-13C>A
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-13C>A
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28720
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

7-128434391-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434391
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434391
    reference: chr 7
allele count: 1
allele frequency: 4.718761796904492e-5
allele num: 21192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-11G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-11G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-11G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-11G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-11G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-11G>T
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-11G>T
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1539
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2541
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

7-128434393-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434393
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434393
    reference: chr 7
allele count: 1
allele frequency: 4.710759374411155e-5
allele num: 21228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-9G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-9G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-9G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-9G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-9G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-9G>C
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-9G>C
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29724
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2393
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3336
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27227
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

7-128434395-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434395
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434395
    reference: chr 7
allele count: 1
allele frequency: 4.706768332862657e-5
allele num: 21246
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.17-7C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.17-7C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.17-7C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.17-7C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.17-7C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.167-7C>G
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.167-7C>G
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27809
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
hgvs: c.17-7C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ

7-128434422-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434422
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434422
    reference: chr 7
allele count: 1
allele frequency: 4.553734061930783e-5
allele num: 21960
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.187C>G
  hgvsp: ENSP00000367956.4:p.Leu63Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.37C>G
  hgvsp: ENSP00000297788.4:p.Leu13Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.37C>G
  hgvsp: ENSP00000418838.2:p.Leu13Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.37C>G
  hgvsp: ENSP00000418042.1:p.Leu13Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.37C>G
  hgvsp: ENSP00000420509.1:p.Leu13Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.187C>G
  hgvsp: ENSP00000419515.1:p.Leu63Val
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.37C>G
  hgvsp: ENSP00000417708.1:p.Leu13Val
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31561
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30003
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu13Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

7-128434424-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434424
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434424
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 21984
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.39C>G
  hgvsp: ENST00000487361.1:c.39C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.189C>G
  hgvsp: ENST00000378685.4:c.189C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.39C>G
  hgvsp: ENST00000488925.1:c.39C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.39C>G
  hgvsp: ENST00000485998.2:c.39C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.39C>G
  hgvsp: ENST00000297788.4:c.39C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.189C>G
  hgvsp: ENST00000464832.1:c.189C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.39C>G
  hgvsp: ENST00000459946.1:c.39C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31525
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9004
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7834
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6769
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu13Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

7-128434430-G-GGAGGAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434430
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434436
    reference: chr 7
allele count: 1
allele frequency: 4.520795660036166e-5
allele num: 22120
alternate allele: GGAGGAA
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.63_68dupAGAGGA
  hgvsp: ENSP00000297788.4:p.Glu22_Glu23dup
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.213_218dupAGAGGA
  hgvsp: ENSP00000367956.4:p.Glu72_Glu73dup
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.63_68dupAGAGGA
  hgvsp: ENSP00000418042.1:p.Glu22_Glu23dup
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.213_218dupAGAGGA
  hgvsp: ENSP00000419515.1:p.Glu72_Glu73dup
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.63_68dupAGAGGA
  hgvsp: ENSP00000417708.1:p.Glu22_Glu23dup
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.63_68dupAGAGGA
  hgvsp: ENSP00000420509.1:p.Glu22_Glu23dup
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.63_68dupAGAGGA
  hgvsp: ENSP00000418838.2:p.Glu22_Glu23dup
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30040
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8419
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu22_Glu23dup
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

7-128434430-GGAGGAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434430
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434424
    reference: chr 7
allele count: 31
allele frequency: 1.401446654611212e-3
allele num: 22120
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.63_68delAGAGGA
  hgvsp: ENSP00000418838.2:p.Glu25_Glu26del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.213_218delAGAGGA
  hgvsp: ENSP00000419515.1:p.Glu75_Glu76del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.213_218delAGAGGA
  hgvsp: ENSP00000367956.4:p.Glu75_Glu76del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.63_68delAGAGGA
  hgvsp: ENSP00000420509.1:p.Glu25_Glu26del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.63_68delAGAGGA
  hgvsp: ENSP00000417708.1:p.Glu25_Glu26del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.63_68delAGAGGA
  hgvsp: ENSP00000418042.1:p.Glu25_Glu26del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.63_68delAGAGGA
  hgvsp: ENSP00000297788.4:p.Glu25_Glu26del
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31431
  bin: 2.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9711
  bin: 7.5e0
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 6.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8419
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1790
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu25_Glu26del
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: GGAGGAA
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

7-128434442-AGAGGAAGAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434442
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434433
    reference: chr 7
allele count: 1
allele frequency: 4.468674591116275e-5
allele num: 22378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.216_224delGGAGGAAGA
  hgvsp: ENSP00000419515.1:p.Glu74_Glu76del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.216_224delGGAGGAAGA
  hgvsp: ENSP00000367956.4:p.Glu74_Glu76del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.66_74delGGAGGAAGA
  hgvsp: ENSP00000417708.1:p.Glu24_Glu26del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.66_74delGGAGGAAGA
  hgvsp: ENSP00000297788.4:p.Glu24_Glu26del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.66_74delGGAGGAAGA
  hgvsp: ENSP00000418042.1:p.Glu24_Glu26del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.66_74delGGAGGAAGA
  hgvsp: ENSP00000420509.1:p.Glu24_Glu26del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.66_74delGGAGGAAGA
  hgvsp: ENSP00000418838.2:p.Glu24_Glu26del
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31509
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9238
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30410
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu24_Glu26del
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: AGAGGAAGAG
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

7-128434448-AGAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434448
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434445
    reference: chr 7
allele count: 16
allele frequency: 7.137121955571416e-4
allele num: 22418
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.69_71delGGA
  hgvsp: ENSP00000417708.1:p.Glu26del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.219_221delGGA
  hgvsp: ENSP00000419515.1:p.Glu76del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.69_71delGGA
  hgvsp: ENSP00000418042.1:p.Glu26del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.219_221delGGA
  hgvsp: ENSP00000367956.4:p.Glu76del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.69_71delGGA
  hgvsp: ENSP00000420509.1:p.Glu26del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.69_71delGGA
  hgvsp: ENSP00000418838.2:p.Glu26del
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.69_71delGGA
  hgvsp: ENSP00000297788.4:p.Glu26del
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 10106
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 31555
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30305
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 9.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1643
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu26del
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: AGAG
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD

7-128434451-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128434451
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 128434451
    reference: chr 7
allele count: 2
allele frequency: 8.911861687906604e-5
allele num: 22442
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418042
  ensembl transcript: ENST00000488925
  gene symbol: CCDC136
  hgvsc: ENST00000488925.1:c.66G>A
  hgvsp: ENST00000488925.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000367956
  ensembl transcript: ENST00000378685
  gene symbol: CCDC136
  hgvsc: ENST00000378685.4:c.216G>A
  hgvsp: ENST00000378685.4:c.216G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000419515
  ensembl transcript: ENST00000464832
  gene symbol: CCDC136
  hgvsc: ENST00000464832.1:c.216G>A
  hgvsp: ENST00000464832.1:c.216G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000420509
  ensembl transcript: ENST00000487361
  gene symbol: CCDC136
  hgvsc: ENST00000487361.1:c.66G>A
  hgvsp: ENST00000487361.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000417708
  ensembl transcript: ENST00000459946
  gene symbol: CCDC136
  hgvsc: ENST00000459946.1:c.66G>A
  hgvsp: ENST00000459946.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000418838
  ensembl transcript: ENST00000485998
  gene symbol: CCDC136
  hgvsc: ENST00000485998.2:c.66G>A
  hgvsp: ENST00000485998.2:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128596
  ensembl protein: ENSP00000297788
  ensembl transcript: ENST00000297788
  gene symbol: CCDC136
  hgvsc: ENST00000297788.4:c.66G>A
  hgvsp: ENST00000297788.4:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/22225
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10067
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu22Glu
num of homozygotes: 0
reference allele: G

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.032355093081863e-5
allele num: 49204
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.21e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 7.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.91429e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.511e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48602
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 1.044568245125348e-3
allele num: 5744
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.13e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.05e-1

FS
type: SiteQuality
SIO_000300: 1.672e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

DP
type: SiteQuality
SIO_000300: 8.79578e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

QD
type: SiteQuality
SIO_000300: 1.101e1

South Asian
type: Population
allele count: 1
allele frequency: 7.270612185546023e-5
allele num: 13754
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46070
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.445e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

FS
type: SiteQuality
SIO_000300: 9.505000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.15e0

MQ
type: SiteQuality
SIO_000300: 5.845e1

DP
type: SiteQuality
SIO_000300: 8.54571e5

QD
type: SiteQuality
SIO_000300: 1.083e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.820000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.194e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 3.388e0

QD
type: SiteQuality
SIO_000300: 1.393e1

DP
type: SiteQuality
SIO_000300: 3.3789e4

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.31578947368421e-2
allele num: 76
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.99e0

MQ
type: SiteQuality
SIO_000300: 5.656e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.47e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.0944e4

BaseQRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.737e0

VQSLOD
type: SiteQuality
SIO_000300: -4.312e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 5.376344086021506e-3
allele num: 186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.74e0

DP
type: SiteQuality
SIO_000300: 2.0513e4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.9e-2

QD
type: SiteQuality
SIO_000300: 1.367e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

South Asian
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allele frequency: 1.851851851851852e-2
allele num: 54
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.68e-1

DP
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SIO_000300: 2.4772e4

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.576e1

InbreedingCoeff
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SIO_000300: -6.78e-2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5930
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

MQ
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 1.815e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5974
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.309243257397224e-4
allele num: 7638
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.72e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.26e0

MQ
type: SiteQuality
SIO_000300: 5.323e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.63e-1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

QD
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 3.70829e5

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7818
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1004
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.945508100147275e-4
allele num: 6790
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.34702e5

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.71e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.468e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8158
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1596
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.48e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.99835e5

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 5.58e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8050
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 6.045949214026602e-4
allele num: 1654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1652
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 9232
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.979e0

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.939e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.6e-1

DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1752
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 10446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1730
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
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allele num: 8540
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 5.315110098709188e-4
allele num: 13170
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 216
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DP
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 4.444444444444445e-4
allele num: 2250
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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allele frequency: 0.0e0
allele num: 220
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.32e-2

QD
type: SiteQuality
SIO_000300: 1.101e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.749e0

DP
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SIO_000300: 5.79236e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1456
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.144688644688645e-4
allele num: 8736
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2388
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 14734
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.15e-2

QD
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BaseQRankSum
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SIO_000300: -9.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

DP
type: SiteQuality
SIO_000300: 5.95434e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.56e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.432522835456066e-5
allele num: 15546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1002
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2578
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African
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.938e0

FS
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.18e-1

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.177e1

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.02e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.807e0

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1054
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2556
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.916459590580997e-5
allele num: 16902
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8996
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.32771e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.285e0

MQRankSum
type: SiteQuality
SIO_000300: -2.938e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.87e-2

QD
type: SiteQuality
SIO_000300: 2.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.892e0

MQ
type: SiteQuality
SIO_000300: 5.177e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.676e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2874
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2766
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 5.1440329218107e-4
allele num: 1944
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9152
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.534e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.66e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.26e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.57e-1

QD
type: SiteQuality
SIO_000300: 1.84e1

MQ
type: SiteQuality
SIO_000300: 5.777e1

DP
type: SiteQuality
SIO_000300: 6.54336e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.333333333333333e-4
allele num: 7500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13690
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9650
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.49e-1

QD
type: SiteQuality
SIO_000300: 1.526e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
type: SiteQuality
SIO_000300: -4.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.287e0

VQSLOD
type: SiteQuality
SIO_000300: 6.3e-2

DP
type: SiteQuality
SIO_000300: 1.209625e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 57
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.926167059149467e-5
allele num: 14438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5694
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.134e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 1.259214e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.095e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

VQSLOD
type: SiteQuality
SIO_000300: 6.26e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61794
num of homozygotes: 0

South Asian
type: Population
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African
type: Population
allele count: 2
allele frequency: 2.496255616575137e-4
allele num: 8012
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5880
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

BaseQRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.349e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62900
num of homozygotes: 0

South Asian
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allele count: 5
allele frequency: 3.29077267342372e-4
allele num: 15194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6058
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10804
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African
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allele count: 0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.01e-1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.308878e6

QD
type: SiteQuality
SIO_000300: 7.79e0

FS
type: SiteQuality
SIO_000300: 3.767e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.902e-1

MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.584836286411614e-5
allele num: 63098
num of homozygotes: 0

South Asian
type: Population
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8358
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8318
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MQRankSum
type: SiteQuality
SIO_000300: -1.109e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.426e0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.313733e6

QD
type: SiteQuality
SIO_000300: 5.43e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
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SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.998e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 617
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15924
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546933976857868e-5
allele num: 64644
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.66e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.892e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -8.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.31e-1

FS
type: SiteQuality
SIO_000300: 8.913e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

QD
type: SiteQuality
SIO_000300: 1.055e1

DP
type: SiteQuality
SIO_000300: 1.352728e6

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16078
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.095290251916758e-4
allele num: 9130
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.830801836806782e-5
allele num: 11324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.331e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1

FS
type: SiteQuality
SIO_000300: 3.408e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

QD
type: SiteQuality
SIO_000300: 1.091e1

DP
type: SiteQuality
SIO_000300: 1.361678e6

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16098
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537089981247502e-5
allele num: 65058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9178
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.426e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e0

QD
type: SiteQuality
SIO_000300: 1.149e1

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

DP
type: SiteQuality
SIO_000300: 1.363724e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 117
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GenotypeQuality
all individuals: 1446
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.802816901408451e-5
allele num: 11360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.080613788631943e-4
allele num: 9254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 4.448262110010123e-4
allele num: 65194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

FS
type: SiteQuality
SIO_000300: 1.404e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.94e0

QD
type: SiteQuality
SIO_000300: 1.278e1

DP
type: SiteQuality
SIO_000300: 1.368107e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 47853
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65284
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.160092807424594e-3
allele num: 862
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.228583727938011e-4
allele num: 9292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16150
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

DP
type: SiteQuality
SIO_000300: 1.368683e6

MQRankSum
type: SiteQuality
SIO_000300: 1.05e-1

FS
type: SiteQuality
SIO_000300: 4.101e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.36e-1

QD
type: SiteQuality
SIO_000300: 1.284e1

MQ
type: SiteQuality
SIO_000300: 5.95e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.159152500615915e-5
allele num: 16236
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.376807e6

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.14e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 4.08e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522765341860819e-5
allele num: 65670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.953e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.929e1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e0

DP
type: SiteQuality
SIO_000300: 1.377839e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.521236460995497e-5
allele num: 65736
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.146e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 1.378759e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.39e-1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.43e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520820026158104e-5
allele num: 65754
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.241e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.25e-1

FS
type: SiteQuality
SIO_000300: 3.995e0

DP
type: SiteQuality
SIO_000300: 1.378835e6

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.919e1

QD
type: SiteQuality
SIO_000300: 9.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65790
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16182
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.28e-1

FS
type: SiteQuality
SIO_000300: 3.283e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 1.383095e6

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.058e0

QD
type: SiteQuality
SIO_000300: 1.038e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 60
allele frequency: 9.119927040583675e-4
allele num: 65790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.04777870913663e-4
allele num: 9544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.135200974421437e-4
allele num: 6568
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.038e1

FS
type: SiteQuality
SIO_000300: 3.283e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.28e-1

DP
type: SiteQuality
SIO_000300: 1.383095e6

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.058e0

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 447
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GenotypeQuality
all individuals: 641
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519895431194334e-5
allele num: 65794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.44e0

FS
type: SiteQuality
SIO_000300: 2.084e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e0

VQSLOD
type: SiteQuality
SIO_000300: 5.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.987e0

DP
type: SiteQuality
SIO_000300: 1.380238e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 69
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520265134239411e-5
allele num: 65778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16144
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

DP
type: SiteQuality
SIO_000300: 1.379569e6

FS
type: SiteQuality
SIO_000300: 9.478999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -3.769e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.904e1

QD
type: SiteQuality
SIO_000300: 1.061e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 201
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variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52031135976648e-5
allele num: 65776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9552
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

DP
type: SiteQuality
SIO_000300: 1.378701e6

MQ
type: SiteQuality
SIO_000300: 5.855e1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

FS
type: SiteQuality
SIO_000300: 8.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.465e0

QD
type: SiteQuality
SIO_000300: 1.001e1

GenotypeQuality
all individuals: 642
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 103
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GenotypeQuality
all individuals: 47
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 213
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16082
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.122700319294511e-5
allele num: 65770
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.004e1

FS
type: SiteQuality
SIO_000300: 5.41e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 1.378959e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65708
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.294850812035755e-5
allele num: 15886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9560
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QD
type: SiteQuality
SIO_000300: 3.79e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.373857e6

FS
type: SiteQuality
SIO_000300: 2.821e0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.57e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.384e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 200
bin: 9.25e1
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GenotypeQuality
all individuals: 450
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524622655892666e-5
allele num: 65590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9554
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

FS
type: SiteQuality
SIO_000300: 3.604e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.364044e6

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9554
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.286504567091213e-4
allele num: 15546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.67e-1

FS
type: SiteQuality
SIO_000300: 6.09e0

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

DP
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.68e0

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 122
bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9534
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65402
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.379999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

DP
type: SiteQuality
SIO_000300: 1.349157e6

QD
type: SiteQuality
SIO_000300: 1.354e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.47e0

FS
type: SiteQuality
SIO_000300: 2.98e0

MQ
type: SiteQuality
SIO_000300: 5.932e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535579374097847e-5
allele num: 65122
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.145e0

QD
type: SiteQuality
SIO_000300: 1.073e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e0

MQRankSum
type: SiteQuality
SIO_000300: -3.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 4.254e0

DP
type: SiteQuality
SIO_000300: 1.325724e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.074e0

MQ
type: SiteQuality
SIO_000300: 5.879e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13972
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64976
num of homozygotes: 0

East Asian
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allele count: 3
allele frequency: 3.504672897196261e-4
allele num: 8560
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.906e0

VQSLOD
type: SiteQuality
SIO_000300: 7.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.28e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.205e1

FS
type: SiteQuality
SIO_000300: 4.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.37e-1

DP
type: SiteQuality
SIO_000300: 1.314148e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64896
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.243227582210633e-5
allele num: 13806
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.309758e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.541e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.77e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 7.57e0

VQSLOD
type: SiteQuality
SIO_000300: -5.377999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.626916314506925e-5
allele num: 64838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.684055408193339e-4
allele num: 13572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.02e-1

DP
type: SiteQuality
SIO_000300: 1.301569e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

QD
type: SiteQuality
SIO_000300: 1.185e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-2

FS
type: SiteQuality
SIO_000300: 2.167e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 702
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GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.76731544800982e-5
allele num: 11406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546025169289756e-5
allele num: 64682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -4.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

DP
type: SiteQuality
SIO_000300: 1.293911e6

QD
type: SiteQuality
SIO_000300: 1.056e1

MQ
type: SiteQuality
SIO_000300: 5.919e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13268
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.092050338579512e-5
allele num: 64682
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

DP
type: SiteQuality
SIO_000300: 1.293911e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

QD
type: SiteQuality
SIO_000300: 1.056e1

MQRankSum
type: SiteQuality
SIO_000300: -4.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.466e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.568233855032463e-5
allele num: 63766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.078050884001725e-4
allele num: 9276
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.249861e6

MQ
type: SiteQuality
SIO_000300: 6.044e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.53e-1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.845e0

MQRankSum
type: SiteQuality
SIO_000300: 8.84e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

African
type: Population
allele count: 0
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East Asian
type: Population
allele count: 2
allele frequency: 2.350176263219741e-4
allele num: 8510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63762
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11070
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

DP
type: SiteQuality
SIO_000300: 1.249001e6

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.251e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.52e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 9
allele frequency: 1.145329600407228e-3
allele num: 7858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.81e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -6.69e-2

MQ
type: SiteQuality
SIO_000300: 5.962e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.079e0

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

DP
type: SiteQuality
SIO_000300: 2.55656e5

QD
type: SiteQuality
SIO_000300: 1.314e1

GenotypeQuality
all individuals: 2626
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2083
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 378
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6952
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 5.050505050505051e-3
allele num: 198
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.96e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

DP
type: SiteQuality
SIO_000300: 2.72043e5

MQRankSum
type: SiteQuality
SIO_000300: -8.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.215e0

QD
type: SiteQuality
SIO_000300: 6.56e0

FS
type: SiteQuality
SIO_000300: 3.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

GenotypeQuality
all individuals: 186
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8908
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.432254368375824e-4
allele num: 6982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.72e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.93e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.067e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 2.73943e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.733e0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6254
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16334
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7946
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.265182186234818e-4
allele num: 7904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.322259136212625e-3
allele num: 602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1936
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 960
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.136e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.1e-1

FS
type: SiteQuality
SIO_000300: 1.843e0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

DP
type: SiteQuality
SIO_000300: 3.14868e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.510000000000001e-2

GenotypeQuality
all individuals: 184
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 450
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6306
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1868
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1443
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1907
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.249063202598052e-4
allele num: 8006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.045e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

VQSLOD
type: SiteQuality
SIO_000300: -1.946e0

FS
type: SiteQuality
SIO_000300: 8.255000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQRankSum
type: SiteQuality
SIO_000300: -6.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.24e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.51e0

DP
type: SiteQuality
SIO_000300: 3.16468e5

GenotypeQuality
all individuals: 6306
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1907
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1443
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1950
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.264862130027827e-4
allele num: 7906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8006
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

QD
type: SiteQuality
SIO_000300: 9.51e0

DP
type: SiteQuality
SIO_000300: 3.16468e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.24e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.255000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.045e0

VQSLOD
type: SiteQuality
SIO_000300: -1.946e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1451
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1932
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 9.75e1
variant carriers: 114

GenotypeQuality
all individuals: 502
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1896
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 7.352941176470588e-3
allele num: 408
num of homozygotes: 0

African
type: Population
allele count: 110
allele frequency: 5.522088353413655e-2
allele num: 1992
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8076
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.264542235710673e-4
allele num: 7908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 966
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.17e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.55e0

DP
type: SiteQuality
SIO_000300: 3.21315e5

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.88e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.78e-1

QD
type: SiteQuality
SIO_000300: 1.252e1

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 206
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6632
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 132
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1490
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 9.75e1
variant carriers: 48

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

African
type: Population
allele count: 46
allele frequency: 2.19256434699714e-2
allele num: 2098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1004
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.900000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

DP
type: SiteQuality
SIO_000300: 3.35741e5

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.272e1

GenotypeQuality
all individuals: 98
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1951
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.75e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 8.270321361058601e-4
allele num: 8464
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1010
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.000000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.78e-1

FS
type: SiteQuality
SIO_000300: 2.613e0

QD
type: SiteQuality
SIO_000300: 1.776e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.32e-1

DP
type: SiteQuality
SIO_000300: 3.37099e5

GenotypeQuality
all individuals: 3256
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1526
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2233
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 77
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1012
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.859999999999999e0

DP
type: SiteQuality
SIO_000300: 3.51237e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: 1.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2848
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6721
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25798
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2170
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8782
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1000
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.251e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.26e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

DP
type: SiteQuality
SIO_000300: 3.61691e5

QD
type: SiteQuality
SIO_000300: 9.74e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1008
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.133016088828461e-4
allele num: 8826
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

MQ
type: SiteQuality
SIO_000300: 5.82e1

DP
type: SiteQuality
SIO_000300: 3.65345e5

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.190000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

FS
type: SiteQuality
SIO_000300: 1.202e0

QD
type: SiteQuality
SIO_000300: 4.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.61e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1010
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.128668171557562e-4
allele num: 8860
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.076e0

FS
type: SiteQuality
SIO_000300: 2.195e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.035e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.16e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.15e-1

DP
type: SiteQuality
SIO_000300: 3.68882e5

QD
type: SiteQuality
SIO_000300: 9.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: -1.765e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 113
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2246
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.127649977447e-4
allele num: 8868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1014
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.68e-1

FS
type: SiteQuality
SIO_000300: 3.356e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.625e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.576e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.140000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

QD
type: SiteQuality
SIO_000300: 1.313e1

DP
type: SiteQuality
SIO_000300: 3.7224e5

VQSLOD
type: SiteQuality
SIO_000300: -7.775e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 461
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 75
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variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.06224771616741e-4
allele num: 9414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1028
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.024e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.569999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.88e0

DP
type: SiteQuality
SIO_000300: 4.14609e5

QD
type: SiteQuality
SIO_000300: 1.649e1

GenotypeQuality
all individuals: 203
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30023
bin: 7.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
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variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 896
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variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1024
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7916
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9446
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.17077e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.818e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.58e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1010
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2282
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.263583522870862e-4
allele num: 7914
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.135e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 4.2337e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.231e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.16e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

QD
type: SiteQuality
SIO_000300: 8.91e0

GenotypeQuality
all individuals: 70
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 870
bin: 1.75e1
variant carriers: 3

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 5

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 91
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variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 9.75e1
variant carriers: 53

Other
type: Population
allele count: 1
allele frequency: 4.347826086956522e-3
allele num: 230
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.622418879056047e-2
allele num: 678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1010
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.314636283961437e-3
allele num: 2282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 4.185851820845542e-4
allele num: 9556
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 1.516300227445034e-3
allele num: 7914
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.91e0

MQRankSum
type: SiteQuality
SIO_000300: -1.231e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.135e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 4.2337e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.16e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 472
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 946
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.32152117545376e-4
allele num: 2314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 468
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.38e-2

DP
type: SiteQuality
SIO_000300: 4.30204e5

FS
type: SiteQuality
SIO_000300: 2.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.56e-1

GenotypeQuality
all individuals: 6956
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 88
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GenotypeQuality
all individuals: 173
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GenotypeQuality
all individuals: 467
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GenotypeQuality
all individuals: 8792
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GenotypeQuality
all individuals: 111
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variant carriers: 1

African
type: Population
allele count: 16
allele frequency: 6.84931506849315e-3
allele num: 2336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7926
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.39e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

DP
type: SiteQuality
SIO_000300: 4.29331e5

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.749e1

QD
type: SiteQuality
SIO_000300: 1.557e1