5-150422236-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422236
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422236
    reference: chr 5
allele count: 1
allele frequency: 8.274720728175424e-6
allele num: 120850
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1003-4C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1003-4C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3246C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1003-4C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1003-4C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1003-4C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.844-4C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1003-4C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.844-4C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1003-4C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1003-4C>G
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11277
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.1003-4C>G
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD

5-150422250-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422250
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422250
    reference: chr 5
allele count: 3
allele frequency: 2.483772685123857e-5
allele num: 120784
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1003-18C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1003-18C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1003-18C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1003-18C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.844-18C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1003-18C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3232C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1003-18C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1003-18C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1003-18C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.844-18C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12678
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14510
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

5-150422250-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422250
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422250
    reference: chr 5
allele count: 2
allele frequency: 1.655848456749238e-5
allele num: 120784
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.844-18C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.844-18C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1003-18C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1003-18C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1003-18C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1003-18C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1003-18C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3232C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1003-18C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1003-18C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1003-18C>G
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

5-150422253-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422253
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422253
    reference: chr 5
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1003-21C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1003-21C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.844-21C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.844-21C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1003-21C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3229C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1003-21C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1003-21C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1003-21C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1003-21C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1003-21C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14345
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

5-150422257-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422257
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422257
    reference: chr 5
allele count: 5
allele frequency: 4.141335497871354e-5
allele num: 120734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3225C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.844-25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.844-25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1003-25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1003-25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1003-25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1003-25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1003-25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1003-25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1003-25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1003-25C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14259
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

5-150422257-G-GTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422257
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422259
    reference: chr 5
allele count: 21
allele frequency: 1.739360909105968e-4
allele num: 120734
alternate allele: GTC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.844-26_844-25insGA
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.844-26_844-25insGA
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1003-26_1003-25insGA
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3224_110+3225insGA
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1003-26_1003-25insGA
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1003-26_1003-25insGA
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1003-26_1003-25insGA
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1003-26_1003-25insGA
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1003-26_1003-25insGA
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1003-26_1003-25insGA
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1003-26_1003-25insGA
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12566
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11243
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14259
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ

5-150422263-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422263
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422263
    reference: chr 5
allele count: 1
allele frequency: 8.286926544683108e-6
allele num: 120672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1003-31C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1003-31C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1003-31C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1003-31C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1003-31C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.844-31C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.844-31C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1003-31C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1003-31C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3219C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1003-31C>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4493
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

5-150422268-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422268
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422268
    reference: chr 5
allele count: 1
allele frequency: 8.286102548805144e-6
allele num: 120684
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1003-36C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.844-36C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1003-36C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3214C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1003-36C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1003-36C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1003-36C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1003-36C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1003-36C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1003-36C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.844-36C>G
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14181
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12108
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

5-150422271-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422271
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422271
    reference: chr 5
allele count: 25
allele frequency: 2.071285356841041e-4
allele num: 120698
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1003-39A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1003-39A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.844-39A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1003-39A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.844-39A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1003-39A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1003-39A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1003-39A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3211A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1003-39A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1003-39A>G
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12137
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14120
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7305
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4508
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

5-150422273-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422273
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422273
    reference: chr 5
allele count: 1
allele frequency: 8.285690612312537e-6
allele num: 120690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1003-41A>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.844-41A>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1003-41A>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1003-41A>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1003-41A>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3209A>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1003-41A>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.844-41A>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1003-41A>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1003-41A>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1003-41A>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12178
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

5-150422273-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422273
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422273
    reference: chr 5
allele count: 2
allele frequency: 1.657138122462507e-5
allele num: 120690
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1003-41A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.844-41A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.844-41A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1003-41A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1003-41A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1003-41A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1003-41A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1003-41A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1003-41A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1003-41A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3209A>C
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14099
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

5-150422279-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422279
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422279
    reference: chr 5
allele count: 1
allele frequency: 8.286789200656313e-6
allele num: 120674
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1003-47T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1003-47T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1003-47T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.844-47T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1003-47T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3203T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1003-47T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.844-47T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1003-47T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1003-47T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1003-47T>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14071
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4279
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

5-150422406-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422406
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422406
    reference: chr 5
allele count: 3
allele frequency: 2.47255464345762e-5
allele num: 121332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3076C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1002+51C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.843+51C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1002+51C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.843+51C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1002+51C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1002+51C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1002+51C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1002+51C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1002+51C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1002+51C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4084
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25323
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

5-150422420-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422420
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422420
    reference: chr 5
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1002+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.843+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3062C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1002+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1002+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1002+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1002+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1002+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.843+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1002+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1002+37C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25321
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53763
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

5-150422426-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422426
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422426
    reference: chr 5
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.843+31G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1002+31G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1002+31G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1002+31G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.843+31G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1002+31G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1002+31G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1002+31G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1002+31G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3056G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1002+31G>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25321
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2477
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

5-150422427-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422427
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422427
    reference: chr 5
allele count: 6
allele frequency: 4.943561011782154e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3055G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1002+30G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1002+30G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1002+30G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.843+30G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1002+30G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1002+30G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1002+30G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1002+30G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.843+30G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1002+30G>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25320
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4191
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

5-150422429-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422429
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422429
    reference: chr 5
allele count: 2
allele frequency: 1.647907980818351e-5
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1002+28C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.843+28C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1002+28C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1002+28C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1002+28C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1002+28C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1002+28C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1002+28C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1002+28C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.843+28C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3053C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25314
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2505
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

5-150422432-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422432
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422432
    reference: chr 5
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1002+25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1002+25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1002+25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1002+25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3050C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.843+25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1002+25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1002+25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.843+25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1002+25C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1002+25C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25314
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

5-150422434-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422434
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422434
    reference: chr 5
allele count: 2
allele frequency: 1.647826516824309e-5
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.843+23G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1002+23G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1002+23G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1002+23G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.843+23G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1002+23G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1002+23G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1002+23G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3048G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1002+23G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1002+23G>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25313
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4189
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD

5-150422435-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422435
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422435
    reference: chr 5
allele count: 2
allele frequency: 1.647826516824309e-5
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3047C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1002+22C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1002+22C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.843+22C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1002+22C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1002+22C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1002+22C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.843+22C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1002+22C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1002+22C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1002+22C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25312
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4189
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

5-150422440-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422440
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422440
    reference: chr 5
allele count: 50
allele frequency: 4.119226903494752e-4
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1002+17G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1002+17G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1002+17G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1002+17G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1002+17G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1002+17G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.843+17G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3042G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1002+17G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.843+17G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1002+17G>C
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25311
  bin: 9.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4189
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

5-150422443-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422443
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422443
    reference: chr 5
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1002+14C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1002+14C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3039C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1002+14C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1002+14C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.843+14C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.843+14C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1002+14C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1002+14C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1002+14C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1002+14C>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25284
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-150422445-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422445
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422444
    reference: chr 5
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.843+11delG
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.1002+11delG
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3036delG
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.1002+11delG
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.1002+11delG
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.1002+11delG
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.1002+11delG
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.1002+11delG
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.1002+11delG
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.843+11delG
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.1002+11delG
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25284
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: AC
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-150422461-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422461
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422461
    reference: chr 5
allele count: 5
allele frequency: 4.118548294097296e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.998A>C
  hgvsp: ENSP00000430760.1:p.Gln333Pro
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3021A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.998A>C
  hgvsp: ENSP00000429912.1:p.Gln333Pro
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.998A>C
  hgvsp: ENSP00000428243.1:p.Gln333Pro
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.563A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.998A>C
  hgvsp: ENSP00000374029.2:p.Gln333Pro
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.998A>C
  hgvsp: ENSP00000430971.1:p.Gln333Pro
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.839A>C
  hgvsp: ENSP00000427854.1:p.Gln280Pro
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.998A>C
  hgvsp: ENSP00000428187.1:p.Gln333Pro
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.998A>C
  hgvsp: ENSP00000431105.1:p.Gln333Pro
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.839A>C
  hgvsp: ENSP00000429891.1:p.Gln280Pro
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.998A>C
  hgvsp: ENSP00000317891.7:p.Gln333Pro
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25284
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln333Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

5-150422480-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422480
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422480
    reference: chr 5
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.979A>G
  hgvsp: ENSP00000431105.1:p.Met327Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.820A>G
  hgvsp: ENSP00000427854.1:p.Met274Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.979A>G
  hgvsp: ENSP00000374029.2:p.Met327Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.979A>G
  hgvsp: ENSP00000317891.7:p.Met327Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.820A>G
  hgvsp: ENSP00000429891.1:p.Met274Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.979A>G
  hgvsp: ENSP00000430760.1:p.Met327Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.979A>G
  hgvsp: ENSP00000429912.1:p.Met327Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.979A>G
  hgvsp: ENSP00000428243.1:p.Met327Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.979A>G
  hgvsp: ENSP00000428187.1:p.Met327Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.979A>G
  hgvsp: ENSP00000430971.1:p.Met327Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+3002A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.544A>G
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25282
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met327Val
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

5-150422486-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422486
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422486
    reference: chr 5
allele count: 3
allele frequency: 2.471210398853358e-5
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.973C>T
  hgvsp: ENSP00000374029.2:p.Arg325Trp
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.973C>T
  hgvsp: ENSP00000430760.1:p.Arg325Trp
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.538C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.973C>T
  hgvsp: ENSP00000317891.7:p.Arg325Trp
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.973C>T
  hgvsp: ENSP00000431105.1:p.Arg325Trp
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.814C>T
  hgvsp: ENSP00000427854.1:p.Arg272Trp
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.973C>T
  hgvsp: ENSP00000428243.1:p.Arg325Trp
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.814C>T
  hgvsp: ENSP00000429891.1:p.Arg272Trp
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.973C>T
  hgvsp: ENSP00000429912.1:p.Arg325Trp
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2996C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.973C>T
  hgvsp: ENSP00000430971.1:p.Arg325Trp
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.973C>T
  hgvsp: ENSP00000428187.1:p.Arg325Trp
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg325Trp
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP

5-150422502-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422502
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422502
    reference: chr 5
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.957G>A
  hgvsp: ENST00000518977.1:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.798G>A
  hgvsp: ENST00000519339.1:c.798G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.798G>A
  hgvsp: ENST00000520931.1:c.798G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.957G>A
  hgvsp: ENST00000315050.7:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.957G>A
  hgvsp: ENST00000389378.2:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.957G>A
  hgvsp: ENST00000523338.1:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.957G>A
  hgvsp: ENST00000521591.1:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.957G>A
  hgvsp: ENST00000524280.1:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2980G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.957G>A
  hgvsp: ENST00000523200.1:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.522G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.957G>A
  hgvsp: ENST00000522226.1:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25281
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln319Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

5-150422508-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422508
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422508
    reference: chr 5
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2974C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.951C>T
  hgvsp: ENST00000523338.1:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.951C>T
  hgvsp: ENST00000523200.1:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.951C>T
  hgvsp: ENST00000524280.1:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.951C>T
  hgvsp: ENST00000518977.1:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.951C>T
  hgvsp: ENST00000389378.2:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.951C>T
  hgvsp: ENST00000521591.1:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.951C>T
  hgvsp: ENST00000522226.1:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.792C>T
  hgvsp: ENST00000519339.1:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.792C>T
  hgvsp: ENST00000520931.1:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.516C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.951C>T
  hgvsp: ENST00000315050.7:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn317Asn
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-150422527-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422527
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422527
    reference: chr 5
allele count: 4
allele frequency: 3.295978905735003e-5
allele num: 121360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.778-5C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.937-5C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.502-5C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.937-5C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.937-5C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.937-5C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.937-5C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.778-5C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.937-5C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.937-5C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.937-5C>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2955C>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25281
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.937-5C>A
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

5-150422528-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422528
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422528
    reference: chr 5
allele count: 10
allele frequency: 8.240218860212928e-5
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.937-6C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.937-6C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.937-6C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2954C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.937-6C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.937-6C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.937-6C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.778-6C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.937-6C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.778-6C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.937-6C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.502-6C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25279
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
hgvs: c.937-6C>T
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-150422536-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422536
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422536
    reference: chr 5
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.778-14G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.937-14G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.937-14G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.937-14G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2946G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.937-14G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.937-14G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.937-14G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.937-14G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.937-14G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.502-14G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.778-14G>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

5-150422539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422539
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422539
    reference: chr 5
allele count: 2
allele frequency: 1.648342591524222e-5
allele num: 121334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.937-17C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.778-17C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.937-17C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.937-17C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.778-17C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.937-17C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2943C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.937-17C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.937-17C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.937-17C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.502-17C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.937-17C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25271
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

5-150422539-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422539
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422539
    reference: chr 5
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.937-17C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.937-17C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.778-17C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.937-17C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.937-17C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2943C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.778-17C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.937-17C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.937-17C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.502-17C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.937-17C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.937-17C>G
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

5-150422546-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422546
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422546
    reference: chr 5
allele count: 2
allele frequency: 1.648559982854976e-5
allele num: 121318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.937-24G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.937-24G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.778-24G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.937-24G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.937-24G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.937-24G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.778-24G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.937-24G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2936G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.937-24G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.937-24G>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.502-24G>C
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25268
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

5-150422551-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422551
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422551
    reference: chr 5
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.937-29C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.778-29C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.937-29C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.778-29C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.937-29C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.502-29C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.937-29C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.937-29C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.937-29C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.937-29C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.937-29C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2931C>G
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

5-150422554-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422554
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422554
    reference: chr 5
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.937-32C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.778-32C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.937-32C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.937-32C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.778-32C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2928C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.502-32C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.937-32C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.937-32C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.937-32C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.937-32C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.937-32C>G
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

5-150422559-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422559
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422559
    reference: chr 5
allele count: 2
allele frequency: 1.649022129876983e-5
allele num: 121284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.778-37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.937-37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.937-37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.937-37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.937-37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.502-37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2923C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.937-37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.937-37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.937-37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.778-37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.937-37C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

5-150422565-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422565
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422565
    reference: chr 5
allele count: 3
allele frequency: 2.474267616785431e-5
allele num: 121248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.937-43C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2917C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.937-43C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.937-43C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.937-43C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.937-43C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.937-43C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.502-43C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.937-43C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.937-43C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.778-43C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.778-43C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

5-150422568-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422568
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422568
    reference: chr 5
allele count: 1
allele frequency: 8.247422680412371e-6
allele num: 121250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.937-46G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.937-46G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.937-46G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.937-46G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.778-46G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.937-46G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.778-46G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2914G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.937-46G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.502-46G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.937-46G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.937-46G>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25263
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

5-150422574-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150422574
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150422574
    reference: chr 5
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.937-52C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.937-52C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.502-52C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.937-52C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.937-52C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.937-52C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.778-52C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.937-52C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.778-52C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.937-52C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+2908C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.937-52C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25262
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

5-150425375-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425375
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425375
    reference: chr 5
allele count: 4
allele frequency: 3.30698766493601e-5
allele num: 120956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.936+47G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.501+47G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.936+47G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.936+47G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.777+47G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.936+47G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.936+47G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.936+47G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+107G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.936+47G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.936+47G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.777+47G>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12157
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

5-150425376-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425376
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425376
    reference: chr 5
allele count: 3
allele frequency: 2.479379824459908e-5
allele num: 120998
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.501+46C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.777+46C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.936+46C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.936+46C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+106C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.936+46C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.777+46C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.936+46C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.936+46C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.936+46C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.936+46C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.936+46C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13289
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

5-150425384-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425384
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425384
    reference: chr 5
allele count: 1
allele frequency: 8.259684480052863e-6
allele num: 121070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.501+38T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.777+38T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.936+38T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.936+38T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.777+38T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+98T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.936+38T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.936+38T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.936+38T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.936+38T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.936+38T>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.936+38T>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5340
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-150425385-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425385
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425385
    reference: chr 5
allele count: 1
allele frequency: 8.259411599517651e-6
allele num: 121074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.777+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+97C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.936+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.501+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.777+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.936+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.936+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.936+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.936+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.936+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.936+37C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.936+37C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: G
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

5-150425393-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425393
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425393
    reference: chr 5
allele count: 1
allele frequency: 8.256547442121603e-6
allele num: 121116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.777+29G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.936+29G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+89G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.936+29G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.936+29G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.936+29G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.501+29G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.936+29G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.936+29G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.936+29G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.936+29G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.777+29G>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

5-150425397-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425397
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425397
    reference: chr 5
allele count: 1
allele frequency: 8.255729476256522e-6
allele num: 121128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.936+25G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.936+25G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.936+25G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.777+25G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.936+25G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.936+25G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.501+25G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.936+25G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.777+25G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.936+25G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.936+25G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+85G>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

5-150425408-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425408
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425408
    reference: chr 5
allele count: 8
allele frequency: 6.602621240632531e-5
allele num: 121164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.777+14G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.501+14G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+74G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.936+14G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.936+14G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.936+14G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.936+14G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.936+14G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.936+14G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.936+14G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.777+14G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.936+14G>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4073
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/5-150425411-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425411
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425411
    reference: chr 5
allele count: 1
allele frequency: 8.252323028932645e-6
allele num: 121178
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.936+11G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.936+11G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.936+11G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+71G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.936+11G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.936+11G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.501+11G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.936+11G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.936+11G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.777+11G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.936+11G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.777+11G>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

5-150425411-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425411
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425411
    reference: chr 5
allele count: 342
allele frequency: 2.822294475894964e-3
allele num: 121178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.936+11G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.777+11G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.501+11G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.936+11G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+71G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.936+11G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.936+11G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.936+11G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.936+11G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.777+11G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.936+11G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.936+11G>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 5.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7868
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 12377
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 7.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 6.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13439
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 7.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS

5-150425412-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425412
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425412
    reference: chr 5
allele count: 4
allele frequency: 3.301092661671013e-5
allele num: 121172
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.777+10C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.936+10C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.936+10C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.936+10C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+70C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.777+10C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.936+10C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.936+10C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.936+10C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.936+10C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.936+10C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.501+10C>T
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5361
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

5-150425419-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425419
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425419
    reference: chr 5
allele count: 1
allele frequency: 8.251505899826718e-6
allele num: 121190
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.936+3A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.936+3A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.936+3A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.777+3A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.936+3A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.777+3A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.936+3A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.936+3A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.501+3A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.936+3A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.936+3A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+63A>G
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.936+3A>G
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD

5-150425430-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425430
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425430
    reference: chr 5
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.928C>T
  hgvsp: ENSP00000317891.7:p.Arg310Cys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+52C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.769C>T
  hgvsp: ENSP00000427854.1:p.Arg257Cys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.769C>T
  hgvsp: ENSP00000428487.1:p.Arg257Cys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.769C>T
  hgvsp: ENSP00000429891.1:p.Arg257Cys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.928C>T
  hgvsp: ENSP00000431105.1:p.Arg310Cys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.928C>T
  hgvsp: ENSP00000374029.2:p.Arg310Cys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.928C>T
  hgvsp: ENSP00000430971.1:p.Arg310Cys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.493C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.928C>T
  hgvsp: ENSP00000429912.1:p.Arg310Cys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.928C>T
  hgvsp: ENSP00000430760.1:p.Arg310Cys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.928C>T
  hgvsp: ENSP00000428243.1:p.Arg310Cys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.928C>T
  hgvsp: ENSP00000428187.1:p.Arg310Cys
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12488
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg310Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

5-150425440-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425440
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425440
    reference: chr 5
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.918G>A
  hgvsp: ENST00000523200.1:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.918G>A
  hgvsp: ENST00000521591.1:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.918G>A
  hgvsp: ENST00000522226.1:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.759G>A
  hgvsp: ENST00000519339.1:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.483G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.759G>A
  hgvsp: ENST00000522100.1:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.918G>A
  hgvsp: ENST00000315050.7:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.918G>A
  hgvsp: ENST00000524280.1:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.918G>A
  hgvsp: ENST00000389378.2:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.918G>A
  hgvsp: ENST00000523338.1:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.918G>A
  hgvsp: ENST00000518977.1:c.918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+42G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.759G>A
  hgvsp: ENST00000520931.1:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu306Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

5-150425443-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425443
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425443
    reference: chr 5
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+39G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.915G>A
  hgvsp: ENSP00000430971.1:p.Met305Ile
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.915G>A
  hgvsp: ENSP00000429912.1:p.Met305Ile
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.915G>A
  hgvsp: ENSP00000374029.2:p.Met305Ile
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.915G>A
  hgvsp: ENSP00000428243.1:p.Met305Ile
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.756G>A
  hgvsp: ENSP00000429891.1:p.Met252Ile
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.915G>A
  hgvsp: ENSP00000430760.1:p.Met305Ile
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.480G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.756G>A
  hgvsp: ENSP00000427854.1:p.Met252Ile
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.756G>A
  hgvsp: ENSP00000428487.1:p.Met252Ile
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.915G>A
  hgvsp: ENSP00000317891.7:p.Met305Ile
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.915G>A
  hgvsp: ENSP00000428187.1:p.Met305Ile
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.915G>A
  hgvsp: ENSP00000431105.1:p.Met305Ile
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met305Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

5-150425445-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425445
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425445
    reference: chr 5
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.913A>G
  hgvsp: ENSP00000430760.1:p.Met305Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+37A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.913A>G
  hgvsp: ENSP00000430971.1:p.Met305Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.478A>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.754A>G
  hgvsp: ENSP00000429891.1:p.Met252Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.913A>G
  hgvsp: ENSP00000428243.1:p.Met305Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.754A>G
  hgvsp: ENSP00000427854.1:p.Met252Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.913A>G
  hgvsp: ENSP00000374029.2:p.Met305Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.913A>G
  hgvsp: ENSP00000431105.1:p.Met305Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.913A>G
  hgvsp: ENSP00000429912.1:p.Met305Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.913A>G
  hgvsp: ENSP00000428187.1:p.Met305Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.754A>G
  hgvsp: ENSP00000428487.1:p.Met252Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.913A>G
  hgvsp: ENSP00000317891.7:p.Met305Val
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met305Val
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

5-150425453-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425453
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425453
    reference: chr 5
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.905A>C
  hgvsp: ENSP00000428187.1:p.Lys302Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.746A>C
  hgvsp: ENSP00000428487.1:p.Lys249Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.905A>C
  hgvsp: ENSP00000431105.1:p.Lys302Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.905A>C
  hgvsp: ENSP00000430760.1:p.Lys302Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.905A>C
  hgvsp: ENSP00000317891.7:p.Lys302Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.905A>C
  hgvsp: ENSP00000428243.1:p.Lys302Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.470A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.746A>C
  hgvsp: ENSP00000427854.1:p.Lys249Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.905A>C
  hgvsp: ENSP00000430971.1:p.Lys302Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.905A>C
  hgvsp: ENSP00000374029.2:p.Lys302Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.905A>C
  hgvsp: ENSP00000429912.1:p.Lys302Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+29A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.746A>C
  hgvsp: ENSP00000429891.1:p.Lys249Thr
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys302Thr
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

5-150425460-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425460
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425460
    reference: chr 5
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.898G>A
  hgvsp: ENSP00000374029.2:p.Glu300Lys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.739G>A
  hgvsp: ENSP00000427854.1:p.Glu247Lys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.898G>A
  hgvsp: ENSP00000429912.1:p.Glu300Lys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.898G>A
  hgvsp: ENSP00000431105.1:p.Glu300Lys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.898G>A
  hgvsp: ENSP00000430760.1:p.Glu300Lys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.739G>A
  hgvsp: ENSP00000428487.1:p.Glu247Lys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.898G>A
  hgvsp: ENSP00000428243.1:p.Glu300Lys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.463G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.898G>A
  hgvsp: ENSP00000428187.1:p.Glu300Lys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.898G>A
  hgvsp: ENSP00000317891.7:p.Glu300Lys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.739G>A
  hgvsp: ENSP00000429891.1:p.Glu247Lys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.898G>A
  hgvsp: ENSP00000430971.1:p.Glu300Lys
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+22G>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu300Lys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

5-150425461-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425461
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425461
    reference: chr 5
allele count: 2
allele frequency: 1.649647800194658e-5
allele num: 121238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+21C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.897C>T
  hgvsp: ENST00000315050.7:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.897C>T
  hgvsp: ENST00000521591.1:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.738C>T
  hgvsp: ENST00000519339.1:c.738C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.462C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.897C>T
  hgvsp: ENST00000523200.1:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.897C>T
  hgvsp: ENST00000518977.1:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.897C>T
  hgvsp: ENST00000389378.2:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.897C>T
  hgvsp: ENST00000523338.1:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.897C>T
  hgvsp: ENST00000522226.1:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.897C>T
  hgvsp: ENST00000524280.1:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.738C>T
  hgvsp: ENST00000520931.1:c.738C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.738C>T
  hgvsp: ENST00000522100.1:c.738C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala299Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ

5-150425461-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425461
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425461
    reference: chr 5
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.897C>G
  hgvsp: ENST00000523200.1:c.897C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.897C>G
  hgvsp: ENST00000389378.2:c.897C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.897C>G
  hgvsp: ENST00000524280.1:c.897C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.897C>G
  hgvsp: ENST00000518977.1:c.897C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.897C>G
  hgvsp: ENST00000523338.1:c.897C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.897C>G
  hgvsp: ENST00000522226.1:c.897C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.738C>G
  hgvsp: ENST00000522100.1:c.738C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.897C>G
  hgvsp: ENST00000521591.1:c.897C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.462C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.738C>G
  hgvsp: ENST00000520931.1:c.738C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+21C>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.897C>G
  hgvsp: ENST00000315050.7:c.897C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.738C>G
  hgvsp: ENST00000519339.1:c.738C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala299Ala
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

5-150425466-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425466
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425466
    reference: chr 5
allele count: 14
allele frequency: 1.154791560123398e-4
allele num: 121234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.892G>A
  hgvsp: ENSP00000428187.1:p.Ala298Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.892G>A
  hgvsp: ENSP00000430760.1:p.Ala298Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+16G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.457G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.892G>A
  hgvsp: ENSP00000374029.2:p.Ala298Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.892G>A
  hgvsp: ENSP00000428243.1:p.Ala298Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.892G>A
  hgvsp: ENSP00000430971.1:p.Ala298Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.733G>A
  hgvsp: ENSP00000429891.1:p.Ala245Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.892G>A
  hgvsp: ENSP00000317891.7:p.Ala298Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.892G>A
  hgvsp: ENSP00000431105.1:p.Ala298Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.733G>A
  hgvsp: ENSP00000428487.1:p.Ala245Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.892G>A
  hgvsp: ENSP00000429912.1:p.Ala298Thr
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.733G>A
  hgvsp: ENSP00000427854.1:p.Ala245Thr
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala298Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

5-150425467-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425467
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425467
    reference: chr 5
allele count: 25154
allele frequency: 2.075378294087556e-1
allele num: 121202
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.891C>T
  hgvsp: ENST00000389378.2:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.732C>T
  hgvsp: ENST00000520931.1:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.732C>T
  hgvsp: ENST00000519339.1:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.891C>T
  hgvsp: ENST00000518977.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.891C>T
  hgvsp: ENST00000522226.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.456C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.891C>T
  hgvsp: ENST00000524280.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.891C>T
  hgvsp: ENST00000521591.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.891C>T
  hgvsp: ENST00000523338.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.891C>T
  hgvsp: ENST00000523200.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.732C>T
  hgvsp: ENST00000522100.1:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+15C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.891C>T
  hgvsp: ENST00000315050.7:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.25e1
  variant carriers: 562
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 442
genotype depth: GenotypeDepth
  all individuals: 6158
  bin: 3.75e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 4.75e1
  variant carriers: 309
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 2.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 4.25e1
  variant carriers: 230
genotype depth: GenotypeDepth
  all individuals: 11553
  bin: 2.75e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.25e1
  variant carriers: 473
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 13340
  bin: 9.75e1
  variant carriers: 13242
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.75e1
  variant carriers: 1009
genotype depth: GenotypeDepth
  all individuals: 12006
  bin: 3.25e1
  variant carriers: 174
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 8.25e1
  variant carriers: 1107
genotype quality: GenotypeQuality
hgvs: p.Gly297Gly
num of homozygotes: 3046
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

5-150425474-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425474
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425474
    reference: chr 5
allele count: 5
allele frequency: 4.125889129107322e-5
allele num: 121186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+8C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.884C>T
  hgvsp: ENSP00000428243.1:p.Ala295Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.884C>T
  hgvsp: ENSP00000431105.1:p.Ala295Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.884C>T
  hgvsp: ENSP00000317891.7:p.Ala295Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.884C>T
  hgvsp: ENSP00000374029.2:p.Ala295Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.449C>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.884C>T
  hgvsp: ENSP00000429912.1:p.Ala295Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.725C>T
  hgvsp: ENSP00000429891.1:p.Ala242Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.725C>T
  hgvsp: ENSP00000428487.1:p.Ala242Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.884C>T
  hgvsp: ENSP00000430971.1:p.Ala295Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.884C>T
  hgvsp: ENSP00000430760.1:p.Ala295Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.884C>T
  hgvsp: ENSP00000428187.1:p.Ala295Val
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.725C>T
  hgvsp: ENSP00000427854.1:p.Ala242Val
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17541
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala295Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-150425475-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425475
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425475
    reference: chr 5
allele count: 4
allele frequency: 3.300602359930687e-5
allele num: 121190
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.883G>T
  hgvsp: ENSP00000317891.7:p.Ala295Ser
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.724G>T
  hgvsp: ENSP00000428487.1:p.Ala242Ser
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.883G>T
  hgvsp: ENSP00000431105.1:p.Ala295Ser
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.724G>T
  hgvsp: ENSP00000427854.1:p.Ala242Ser
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+7G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.883G>T
  hgvsp: ENSP00000429912.1:p.Ala295Ser
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.883G>T
  hgvsp: ENSP00000428243.1:p.Ala295Ser
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.724G>T
  hgvsp: ENSP00000429891.1:p.Ala242Ser
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.883G>T
  hgvsp: ENSP00000430971.1:p.Ala295Ser
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.448G>T
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.883G>T
  hgvsp: ENSP00000428187.1:p.Ala295Ser
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.883G>T
  hgvsp: ENSP00000430760.1:p.Ala295Ser
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.883G>T
  hgvsp: ENSP00000374029.2:p.Ala295Ser
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4722
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala295Ser
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

5-150425478-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425478
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425478
    reference: chr 5
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.880G>A
  hgvsp: ENSP00000428243.1:p.Val294Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.880G>A
  hgvsp: ENSP00000374029.2:p.Val294Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.880G>A
  hgvsp: ENSP00000428187.1:p.Val294Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.721G>A
  hgvsp: ENSP00000427854.1:p.Val241Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.445G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.880G>A
  hgvsp: ENSP00000430760.1:p.Val294Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.721G>A
  hgvsp: ENSP00000428487.1:p.Val241Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.721G>A
  hgvsp: ENSP00000429891.1:p.Val241Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.880G>A
  hgvsp: ENSP00000431105.1:p.Val294Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.880G>A
  hgvsp: ENSP00000430971.1:p.Val294Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.880G>A
  hgvsp: ENSP00000317891.7:p.Val294Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.880G>A
  hgvsp: ENSP00000429912.1:p.Val294Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+4G>A
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9491
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val294Met
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

5-150425481-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425481
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425481
    reference: chr 5
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.877G>A
  hgvsp: ENSP00000428187.1:p.Val293Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.877G>A
  hgvsp: ENSP00000430971.1:p.Val293Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.718G>A
  hgvsp: ENSP00000429891.1:p.Val240Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.877G>A
  hgvsp: ENSP00000317891.7:p.Val293Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.877G>A
  hgvsp: ENSP00000431105.1:p.Val293Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.442G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.877G>A
  hgvsp: ENSP00000430760.1:p.Val293Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.110+1G>A
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.718G>A
  hgvsp: ENSP00000428487.1:p.Val240Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.877G>A
  hgvsp: ENSP00000428243.1:p.Val293Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.718G>A
  hgvsp: ENSP00000427854.1:p.Val240Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.877G>A
  hgvsp: ENSP00000429912.1:p.Val293Met
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.877G>A
  hgvsp: ENSP00000374029.2:p.Val293Met
  variant of: http://identifiers.org/hgnc/16903
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9455
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.110+1G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

5-150425485-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425485
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425485
    reference: chr 5
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.873A>C
  hgvsp: ENST00000518977.1:c.873A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.873A>C
  hgvsp: ENST00000315050.7:c.873A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.714A>C
  hgvsp: ENST00000519339.1:c.714A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.714A>C
  hgvsp: ENST00000522100.1:c.714A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.107A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.873A>C
  hgvsp: ENST00000521591.1:c.873A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.714A>C
  hgvsp: ENST00000520931.1:c.714A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.873A>C
  hgvsp: ENST00000523200.1:c.873A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.873A>C
  hgvsp: ENST00000522226.1:c.873A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.873A>C
  hgvsp: ENST00000389378.2:c.873A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.873A>C
  hgvsp: ENST00000523338.1:c.873A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.438A>C
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.873A>C
  hgvsp: ENST00000524280.1:c.873A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17587
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro291Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/5-150425489-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 150425489
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 150425489
    reference: chr 5
allele count: 2
allele frequency: 1.65169133192389e-5
allele num: 121088
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428187
  ensembl transcript: ENST00000522226
  gene symbol: TNIP1
  hgvsc: ENST00000522226.1:c.869T>G
  hgvsp: ENSP00000428187.1:p.Val290Gly
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521782
  gene symbol: TNIP1
  hgvsc: ENST00000521782.1:n.434T>G
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429912
  ensembl transcript: ENST00000524280
  gene symbol: TNIP1
  hgvsc: ENST00000524280.1:c.869T>G
  hgvsp: ENSP00000429912.1:p.Val290Gly
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428243
  ensembl transcript: ENST00000523338
  gene symbol: TNIP1
  hgvsc: ENST00000523338.1:c.869T>G
  hgvsp: ENSP00000428243.1:p.Val290Gly
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000374029
  ensembl transcript: ENST00000389378
  gene symbol: TNIP1
  hgvsc: ENST00000389378.2:c.869T>G
  hgvsp: ENSP00000374029.2:p.Val290Gly
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000431105
  ensembl transcript: ENST00000523200
  gene symbol: TNIP1
  hgvsc: ENST00000523200.1:c.869T>G
  hgvsp: ENSP00000431105.1:p.Val290Gly
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000429891
  ensembl transcript: ENST00000520931
  gene symbol: TNIP1
  hgvsc: ENST00000520931.1:c.710T>G
  hgvsp: ENSP00000429891.1:p.Val237Gly
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430971
  ensembl transcript: ENST00000518977
  gene symbol: TNIP1
  hgvsc: ENST00000518977.1:c.869T>G
  hgvsp: ENSP00000430971.1:p.Val290Gly
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000427854
  ensembl transcript: ENST00000519339
  gene symbol: TNIP1
  hgvsc: ENST00000519339.1:c.710T>G
  hgvsp: ENSP00000427854.1:p.Val237Gly
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000428487
  ensembl transcript: ENST00000522100
  gene symbol: TNIP1
  hgvsc: ENST00000522100.1:c.710T>G
  hgvsp: ENSP00000428487.1:p.Val237Gly
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000430760
  ensembl transcript: ENST00000521591
  gene symbol: TNIP1
  hgvsc: ENST00000521591.1:c.869T>G
  hgvsp: ENSP00000430760.1:p.Val290Gly
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145901
  ensembl protein: ENSP00000317891
  ensembl transcript: ENST00000315050
  gene symbol: TNIP1
  hgvsc: ENST00000315050.7:c.869T>G
  hgvsp: ENSP00000317891.7:p.Val290Gly
  variant of: http://identifiers.org/hgnc/16903
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145901
  ensembl transcript: ENST00000521423
  gene symbol: TNIP1
  hgvsc: ENST00000521423.1:n.103T>G
  variant of: http://identifiers.org/hgnc/16903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18573
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val290Gly
num of homozygotes: 0
reference allele: A

GenotypeDepth
all individuals: 59
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19541
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7488
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10571
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2561
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4185
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3836
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4716
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505253334136135e-5
allele num: 66434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.32e-1

DP
type: SiteQuality
SIO_000300: 1.899954e6

VQSLOD
type: SiteQuality
SIO_000300: -1.755e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.81e-1

MQ
type: SiteQuality
SIO_000300: 5.811e1

FS
type: SiteQuality
SIO_000300: 4.847e0

MQRankSum
type: SiteQuality
SIO_000300: 1.92e0

QD
type: SiteQuality
SIO_000300: 1.308e1

GenotypeQuality
all individuals: 331
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19032
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2576
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10581
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2186
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7425
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3882
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4822
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.518208379770475e-5
allele num: 66398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

QD
type: SiteQuality
SIO_000300: 1.242e1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

DP
type: SiteQuality
SIO_000300: 1.891828e6

FS
type: SiteQuality
SIO_000300: 1.643e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.53e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.373e0

GenotypeQuality
all individuals: 3882
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7425
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19032
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4822
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2186
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10581
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2576
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.051571559353067e-4
allele num: 6554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

FS
type: SiteQuality
SIO_000300: 1.643e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.373e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 1.242e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.56e-1

DP
type: SiteQuality
SIO_000300: 1.891828e6

GenotypeQuality
all individuals: 545
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4253
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7403
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1070
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10581
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4863
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2578
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18526
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3897
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505751972535084e-5
allele num: 66412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

FS
type: SiteQuality
SIO_000300: 3.352e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.166e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.889775e6

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

QD
type: SiteQuality
SIO_000300: 1.536e1

GenotypeQuality
all individuals: 2204
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7448
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4297
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10612
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4905
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1068
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2583
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3949
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18367
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.677542519958348e-5
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.02663773880552e-5
allele num: 66372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

DP
type: SiteQuality
SIO_000300: 1.890054e6

FS
type: SiteQuality
SIO_000300: 2.472e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

QD
type: SiteQuality
SIO_000300: 1.75e1

MQ
type: SiteQuality
SIO_000300: 6.029e1

GenotypeQuality
all individuals: 1068
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3949
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4297
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73550850399167e-4
allele num: 11524
num of homozygotes: 0

South Asian
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allele count: 16
allele frequency: 9.754907938056335e-4
allele num: 16402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.51997830410414e-5
allele num: 66372
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.472e0

BaseQRankSum
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SIO_000300: -3.43e-1

DP
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SIO_000300: 1.890054e6

MQRankSum
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SIO_000300: 3.94e-1

VQSLOD
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ReadPosRankSum
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SIO_000300: -7.43e-1

InbreedingCoeff
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SIO_000300: 1.9e-3

QD
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SIO_000300: 1.75e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

MQ
type: SiteQuality
SIO_000300: 6.029e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66336
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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SIO_000300: -3.065e0

FS
type: SiteQuality
SIO_000300: 2.836e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: -2.376e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.507340749449821e-5
allele num: 66342
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
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QD
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ClippingRankSum
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SIO_000300: -5.01e-1

MQ
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SIO_000300: 6.0e1

DP
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SIO_000300: 1.892706e6

BaseQRankSum
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SIO_000300: -2.207e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 25

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 25
allele frequency: 2.900905082385704e-3
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66358
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

DP
type: SiteQuality
SIO_000300: 1.893596e6

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.473e0

VQSLOD
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SIO_000300: 1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.44e-1

QD
type: SiteQuality
SIO_000300: 1.294e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66346
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

ReadPosRankSum
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BaseQRankSum
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FS
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QD
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InbreedingCoeff
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MQ
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MQRankSum
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DP
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ClippingRankSum
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SIO_000300: -1.47e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.014499743767522e-5
allele num: 66346
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
type: Population
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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FS
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QD
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.507249871883761e-5
allele num: 66346
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African
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European (Finnish)
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MQ
type: SiteQuality
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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DP
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BaseQRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 1
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allele num: 8654
num of homozygotes: 0

African
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allele count: 0
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Latino
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allele count: 0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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European (Non-Finnish)
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Other
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South Asian
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QD
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FS
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
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SIO_000300: 5.0e-3

MQ
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SIO_000300: 5.977e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66692
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Latino
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East Asian
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African
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MQ
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
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FS
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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South Asian
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allele frequency: 0.0e0
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Latino
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ClippingRankSum
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MQ
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 7.495577609210566e-5
allele num: 66706
num of homozygotes: 0

African
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allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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FS
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ClippingRankSum
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DP
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QD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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SIO_000300: 5.968e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 1.921968095329617e-4
allele num: 10406
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

MQ
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QD
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BaseQRankSum
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DP
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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Latino
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allele num: 11578
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FS
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ReadPosRankSum
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QD
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DP
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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South Asian
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FS
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ReadPosRankSum
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DP
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VQSLOD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Latino
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European (Non-Finnish)
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African
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South Asian
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MQ
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DP
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InbreedingCoeff
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ClippingRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 4.612723428791082e-3
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66712
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South Asian
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num of homozygotes: 0

Other
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allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
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VQSLOD
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MQRankSum
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BaseQRankSum
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FS
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QD
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DP
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ReadPosRankSum
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ClippingRankSum
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MQ
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SIO_000300: 5.965e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

Latino
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
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QD
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MQ
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DP
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ReadPosRankSum
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FS
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 16510
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: -2.299e0

MQRankSum
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DP
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InbreedingCoeff
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FS
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SIO_000300: 0.0e0

QD
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VQSLOD
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MQ
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SIO_000300: 5.966e1

BaseQRankSum
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SIO_000300: 3.62e-1

ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.777675063554426e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

African
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num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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DP
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SIO_000300: 5.323601e6

FS
type: SiteQuality
SIO_000300: 5.22e-1

ClippingRankSum
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QD
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InbreedingCoeff
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MQRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: 8.22e-1

MQ
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SIO_000300: 5.973e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66732
num of homozygotes: 0

East Asian
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InbreedingCoeff
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VQSLOD
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MQ
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DP
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BaseQRankSum
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QD
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FS
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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num of homozygotes: 0

South Asian
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allele num: 16512
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Other
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European (Finnish)
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East Asian
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African
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European (Non-Finnish)
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allele num: 66728
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FS
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VQSLOD
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MQ
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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Other
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European (Finnish)
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East Asian
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African
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European (Non-Finnish)
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MQ
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FS
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ClippingRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 421
bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
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SIO_000300: -6.088e0

MQ
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SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 6.75e-1

QD
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SIO_000300: 1.543e1

MQRankSum
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DP
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VQSLOD
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SIO_000300: -8.118e-1

ClippingRankSum
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SIO_000300: -1.016e0

ReadPosRankSum
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SIO_000300: 9.97e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.886836027713626e-4
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.319403e6

BaseQRankSum
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SIO_000300: -7.361e0

MQRankSum
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SIO_000300: 6.1e-1

ClippingRankSum
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VQSLOD
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MQ
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SIO_000300: 5.968e1

FS
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SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: 2.7e-3

QD
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SIO_000300: 1.554e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
all individuals: 562
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 10
allele frequency: 1.15606936416185e-3
allele num: 8650
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DP
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SIO_000300: 5.318251e6

VQSLOD
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SIO_000300: 2.6e0

InbreedingCoeff
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SIO_000300: 2.0e-3

MQ
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ReadPosRankSum
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FS
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SIO_000300: 8.33e-1

MQRankSum
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SIO_000300: 8.799999999999999e-2

BaseQRankSum
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SIO_000300: -4.266e0

QD
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SIO_000300: 1.477e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.64e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.556e1

MQRankSum
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SIO_000300: -1.9e-2

ClippingRankSum
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SIO_000300: 4.84e-1

DP
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VQSLOD
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SIO_000300: 2.02e0

InbreedingCoeff
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SIO_000300: 2.1e-3

FS
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SIO_000300: 1.179e0

BaseQRankSum
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SIO_000300: -9.285e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-2

MQ
type: SiteQuality
SIO_000300: 5.978e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.999040307101727e-5
allele num: 66688
num of homozygotes: 0

MQRankSum
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DP
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BaseQRankSum
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MQ
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FS
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VQSLOD
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ClippingRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

South Asian
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MQ
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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DP
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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Other
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African
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European (Finnish)
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MQ
type: SiteQuality
SIO_000300: 5.925e1

QD
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FS
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DP
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.310133e6

VQSLOD
type: SiteQuality
SIO_000300: -3.167e0

MQRankSum
type: SiteQuality
SIO_000300: -2.34e-1

ClippingRankSum
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SIO_000300: -8.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 5.987e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

QD
type: SiteQuality
SIO_000300: 3.222e1

GenotypeDepth
all individuals: 25267
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 970
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 1.781e1

ReadPosRankSum
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SIO_000300: -3.6e-1

MQRankSum
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SIO_000300: 6.45e-1

InbreedingCoeff
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SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: -5.311e-1

DP
type: SiteQuality
SIO_000300: 5.309375e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

GenotypeDepth
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 53749
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.307704e6

VQSLOD
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SIO_000300: 1.59e0

BaseQRankSum
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SIO_000300: -5.905e0

ClippingRankSum
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SIO_000300: -7.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.61e-1

QD
type: SiteQuality
SIO_000300: 1.356e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeDepth
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1519
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502476361999099e-5
allele num: 66630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 5.305166e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.889999999999999e-1

FS
type: SiteQuality
SIO_000300: 2.921e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.961e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 53748
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 308
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 166
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GenotypeQuality
all individuals: 135
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variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.304538e6

ClippingRankSum
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SIO_000300: -2.08e0

ReadPosRankSum
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VQSLOD
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MQ
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BaseQRankSum
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QD
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SIO_000300: 9.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501185936890143e-5
allele num: 66614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
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allele count: 0
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num of homozygotes: 0

ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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MQ
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DP
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QD
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VQSLOD
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ClippingRankSum
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.010778587342687e-5
allele num: 66428
num of homozygotes: 0

Latino
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allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

East Asian
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African
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allele frequency: 9.645061728395061e-5
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South Asian
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MQRankSum
type: SiteQuality
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VQSLOD
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DP
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MQ
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FS
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ClippingRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.515624059244988e-5
allele num: 66436
num of homozygotes: 0

Latino
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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MQRankSum
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 9.633911368015414e-5
allele num: 10380
num of homozygotes: 0

South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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VQSLOD
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DP
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MQ
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FS
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QD
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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Other
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East Asian
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Latino
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South Asian
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African
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FS
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MQ
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QD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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allele num: 66506
num of homozygotes: 0

European (Finnish)
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South Asian
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African
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Other
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QD
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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FS
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MQ
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
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African
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European (Non-Finnish)
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Latino
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South Asian
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European (Finnish)
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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African
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Other
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South Asian
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allele frequency: 4.240882103477523e-4
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Latino
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ClippingRankSum
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DP
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VQSLOD
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BaseQRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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African
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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VQSLOD
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FS
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ReadPosRankSum
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DP
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MQ
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QD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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allele num: 66554
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South Asian
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European (Finnish)
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Latino
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East Asian
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African
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MQ
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ReadPosRankSum
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QD
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MQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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SIO_000300: -2.139e0

VQSLOD
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FS
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SIO_000300: 5.89e-1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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allele frequency: 0.0e0
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African
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Latino
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East Asian
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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QD
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

African
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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VQSLOD
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FS
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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MQ
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DP
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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Other
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South Asian
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African
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European (Non-Finnish)
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BaseQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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QD
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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Other
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Latino
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European (Finnish)
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FS
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QD
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MQ
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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Latino
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East Asian
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South Asian
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InbreedingCoeff
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MQ
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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QD
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FS
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DP
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BaseQRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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MQRankSum
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FS
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BaseQRankSum
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MQ
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DP
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InbreedingCoeff
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QD
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158211721102618e-4
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

QD
type: SiteQuality
SIO_000300: 9.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 8.77e-1

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.49e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.470801e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 19032
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
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SIO_000300: 3.32e-1

MQ
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SIO_000300: 5.97e1

FS
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SIO_000300: 1.315e0

BaseQRankSum
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SIO_000300: -1.345e0

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.541e1

DP
type: SiteQuality
SIO_000300: 2.470835e6

GenotypeDepth
all individuals: 844
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501140867058965e-5
allele num: 66616
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

QD
type: SiteQuality
SIO_000300: 1.141e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 2.471082e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.84e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeDepth
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 606
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variant carriers: 0

GenotypeDepth
all individuals: 7910
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 3117
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2691
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8335
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3903
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1226
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.471082e6

VQSLOD
type: SiteQuality
SIO_000300: 2.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.84e-1

QD
type: SiteQuality
SIO_000300: 1.141e1

GenotypeDepth
all individuals: 2640
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 84
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variant carriers: 0

GenotypeDepth
all individuals: 5361
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4053
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 340
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 442
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variant carriers: 0

GenotypeQuality
all individuals: 3116
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 36
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GenotypeQuality
all individuals: 20172
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 2689
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GenotypeQuality
all individuals: 1225
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 3
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 65
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GenotypeQuality
all individuals: 1857
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.951424539914137e-4
allele num: 66618
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

DP
type: SiteQuality
SIO_000300: 2.471255e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.059e1

FS
type: SiteQuality
SIO_000300: 1.113e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

GenotypeDepth
all individuals: 75
bin: 7.5e0
variant carriers: 7

GenotypeDepth
all individuals: 1214
bin: 8.75e1
variant carriers: 1168

GenotypeDepth
all individuals: 991
bin: 7.25e1
variant carriers: 865

GenotypeDepth
all individuals: 1356
bin: 9.25e1
variant carriers: 1330

GenotypeDepth
all individuals: 825
bin: 6.75e1
variant carriers: 677

GenotypeDepth
all individuals: 119
bin: 1.25e1
variant carriers: 31

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 106
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 7760
bin: 6.75e1
variant carriers: 7

GenotypeQuality
all individuals: 18168
bin: 6.25e1
variant carriers: 10

GenotypeQuality
all individuals: 1064
bin: 9.25e1
variant carriers: 8

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 24657
bin: 9.75e1
variant carriers: 22025

GenotypeQuality
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variant carriers: 5

GenotypeQuality
all individuals: 34
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GenotypeQuality
all individuals: 8
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variant carriers: 1

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 13
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variant carriers: 4

GenotypeQuality
all individuals: 19
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variant carriers: 3

GenotypeQuality
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bin: 7.25e1
variant carriers: 10

GenotypeQuality
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bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1968
bin: 8.25e1
variant carriers: 11

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 3

East Asian
type: Population
allele count: 570
allele frequency: 6.612529002320186e-2
allele num: 8620
num of homozygotes: 18

European (Finnish)
type: Population
allele count: 1679
allele frequency: 2.543168736746441e-1
allele num: 6602
num of homozygotes: 231

South Asian
type: Population
allele count: 2421
allele frequency: 1.466739367502726e-1
allele num: 16506
num of homozygotes: 212

European (Non-Finnish)
type: Population
allele count: 17615
allele frequency: 2.644259637324367e-1
allele num: 66616
num of homozygotes: 2366

African
type: Population
allele count: 1064
allele frequency: 1.02485070314005e-1
allele num: 10382
num of homozygotes: 55

Latino
type: Population
allele count: 1579
allele frequency: 1.364736387208297e-1
allele num: 11570
num of homozygotes: 148

Other
type: Population
allele count: 226
allele frequency: 2.49448123620309e-1
allele num: 906
num of homozygotes: 16

MQ
type: SiteQuality
SIO_000300: 5.952e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.23e-2

DP
type: SiteQuality
SIO_000300: 3.6163e6

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.81e-1

QD
type: SiteQuality
SIO_000300: 1.496e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.181e0

VQSLOD
type: SiteQuality
SIO_000300: 6.77e0

GenotypeDepth
all individuals: 114
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 763
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 160
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GenotypeDepth
all individuals: 64
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GenotypeDepth
all individuals: 176
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variant carriers: 2

GenotypeDepth
all individuals: 9489
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GenotypeQuality
all individuals: 12312
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GenotypeQuality
all individuals: 182
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GenotypeQuality
all individuals: 68
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GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 61
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 4240
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GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 18
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4505
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variant carriers: 5

GenotypeQuality
all individuals: 1637
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.539951573849879e-4
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.320185614849188e-4
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: -8.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

QD
type: SiteQuality
SIO_000300: 2.68e1

DP
type: SiteQuality
SIO_000300: 2.056127e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-1

FS
type: SiteQuality
SIO_000300: 5.37e-1

InbreedingCoeff
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 3
allele frequency: 4.537205081669691e-4
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501636784094663e-5
allele num: 66594
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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ClippingRankSum
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QD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 5.33e-1

BaseQRankSum
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MQ
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SIO_000300: 5.975e1

DP
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SIO_000300: 2.05581e6

VQSLOD
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SIO_000300: 4.14e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.086e1

InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
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DP
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SIO_000300: 2.055328e6

FS
type: SiteQuality
SIO_000300: 6.48e0

ReadPosRankSum
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SIO_000300: 1.68e0

ClippingRankSum
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SIO_000300: -1.599e0

VQSLOD
type: SiteQuality
SIO_000300: -9.193e-1

BaseQRankSum
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SIO_000300: -2.856e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502133028901039e-5
allele num: 66572
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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VQSLOD
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FS
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SIO_000300: 9.647e0

DP
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SIO_000300: 2.053078e6

BaseQRankSum
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SIO_000300: -4.0e-1

ReadPosRankSum
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SIO_000300: 5.44e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502313562886846e-5
allele num: 66564
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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African
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VQSLOD
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FS
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InbreedingCoeff
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MQ
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QD
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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