3-185146522-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146522
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146522
    reference: chr 3
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.153G>A
  hgvsp: ENSP00000389495.1:p.Met51Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.153G>A
  hgvsp: ENSP00000407361.1:p.Met51Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8713G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.153G>A
  hgvsp: ENSP00000399910.1:p.Met51Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8713G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.153G>A
  hgvsp: ENSP00000405163.1:p.Met51Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.153G>A
  hgvsp: ENSP00000389798.1:p.Met51Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14711G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.153G>A
  hgvsp: ENSP00000265026.3:p.Met51Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.153G>A
  hgvsp: ENSP00000403561.1:p.Met51Ile
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Met51Ile
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

3-185146527-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146527
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146527
    reference: chr 3
allele count: 2
allele frequency: 1.649348507339601e-5
allele num: 121260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.158G>A
  hgvsp: ENSP00000405163.1:p.Arg53Gln
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.158G>A
  hgvsp: ENSP00000389495.1:p.Arg53Gln
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14706G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.158G>A
  hgvsp: ENSP00000403561.1:p.Arg53Gln
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.158G>A
  hgvsp: ENSP00000407361.1:p.Arg53Gln
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8708G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.158G>A
  hgvsp: ENSP00000399910.1:p.Arg53Gln
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.158G>A
  hgvsp: ENSP00000389798.1:p.Arg53Gln
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.158G>A
  hgvsp: ENSP00000265026.3:p.Arg53Gln
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8708G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg53Gln
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

3-185146535-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146535
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146535
    reference: chr 3
allele count: 2
allele frequency: 1.649321304283287e-5
allele num: 121262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.166C>G
  hgvsp: ENSP00000405163.1:p.Leu56Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.166C>G
  hgvsp: ENSP00000389495.1:p.Leu56Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.166C>G
  hgvsp: ENSP00000399910.1:p.Leu56Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.166C>G
  hgvsp: ENSP00000265026.3:p.Leu56Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.166C>G
  hgvsp: ENSP00000389798.1:p.Leu56Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8700C>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.166C>G
  hgvsp: ENSP00000403561.1:p.Leu56Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8700C>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14698C>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.166C>G
  hgvsp: ENSP00000407361.1:p.Leu56Val
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu56Val
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

3-185146535-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146535
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146535
    reference: chr 3
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.166C>T
  hgvsp: ENST00000424227.1:c.166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.166C>T
  hgvsp: ENST00000428617.1:c.166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.166C>T
  hgvsp: ENST00000433092.1:c.166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8700C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.166C>T
  hgvsp: ENST00000439882.1:c.166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.166C>T
  hgvsp: ENST00000438053.1:c.166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8700C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.166C>T
  hgvsp: ENST00000265026.3:c.166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.166C>T
  hgvsp: ENST00000447637.1:c.166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14698C>T
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu56Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

3-185146540-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146540
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146540
    reference: chr 3
allele count: 3
allele frequency: 2.474267616785431e-5
allele num: 121248
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.171C>G
  hgvsp: ENSP00000403561.1:p.Ile57Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.171C>G
  hgvsp: ENSP00000389495.1:p.Ile57Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.171C>G
  hgvsp: ENSP00000407361.1:p.Ile57Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.171C>G
  hgvsp: ENSP00000265026.3:p.Ile57Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.171C>G
  hgvsp: ENSP00000405163.1:p.Ile57Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8695C>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14693C>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.171C>G
  hgvsp: ENSP00000399910.1:p.Ile57Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8695C>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.171C>G
  hgvsp: ENSP00000389798.1:p.Ile57Met
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile57Met
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

3-185146541-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146541
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146541
    reference: chr 3
allele count: 2
allele frequency: 1.649402916144356e-5
allele num: 121256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.172G>A
  hgvsp: ENSP00000399910.1:p.Glu58Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8694G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.172G>A
  hgvsp: ENSP00000407361.1:p.Glu58Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.172G>A
  hgvsp: ENSP00000389495.1:p.Glu58Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14692G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.172G>A
  hgvsp: ENSP00000389798.1:p.Glu58Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.172G>A
  hgvsp: ENSP00000265026.3:p.Glu58Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8694G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.172G>A
  hgvsp: ENSP00000403561.1:p.Glu58Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.172G>A
  hgvsp: ENSP00000405163.1:p.Glu58Lys
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu58Lys
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

3-185146543-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146543
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146543
    reference: chr 3
allele count: 9
allele frequency: 7.421823459559309e-5
allele num: 121264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.174G>A
  hgvsp: ENST00000438053.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.174G>A
  hgvsp: ENST00000265026.3:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.174G>A
  hgvsp: ENST00000428617.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.174G>A
  hgvsp: ENST00000424227.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.174G>A
  hgvsp: ENST00000433092.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14690G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.174G>A
  hgvsp: ENST00000439882.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.174G>A
  hgvsp: ENST00000447637.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8692G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8692G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu58Glu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-185146543-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146543
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146543
    reference: chr 3
allele count: 58
allele frequency: 4.782952896160443e-4
allele num: 121264
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8692G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.174G>C
  hgvsp: ENSP00000405163.1:p.Glu58Asp
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.174G>C
  hgvsp: ENSP00000403561.1:p.Glu58Asp
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8692G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.174G>C
  hgvsp: ENSP00000407361.1:p.Glu58Asp
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.174G>C
  hgvsp: ENSP00000399910.1:p.Glu58Asp
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.174G>C
  hgvsp: ENSP00000389798.1:p.Glu58Asp
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.174G>C
  hgvsp: ENSP00000389495.1:p.Glu58Asp
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.174G>C
  hgvsp: ENSP00000265026.3:p.Glu58Asp
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14690G>C
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18871
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30614
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu58Asp
num of homozygotes: 1
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

3-185146546-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146546
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146546
    reference: chr 3
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.177C>T
  hgvsp: ENST00000438053.1:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.177C>T
  hgvsp: ENST00000265026.3:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.177C>T
  hgvsp: ENST00000424227.1:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14687C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8689C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.177C>T
  hgvsp: ENST00000447637.1:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8689C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.177C>T
  hgvsp: ENST00000428617.1:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.177C>T
  hgvsp: ENST00000439882.1:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.177C>T
  hgvsp: ENST00000433092.1:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser59Ser
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

3-185146547-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146547
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146547
    reference: chr 3
allele count: 225
allele frequency: 1.855823160673045e-3
allele num: 121240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.178G>A
  hgvsp: ENSP00000403561.1:p.Val60Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.178G>A
  hgvsp: ENSP00000407361.1:p.Val60Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.178G>A
  hgvsp: ENSP00000399910.1:p.Val60Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8688G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14686G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.178G>A
  hgvsp: ENSP00000405163.1:p.Val60Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.178G>A
  hgvsp: ENSP00000389798.1:p.Val60Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.178G>A
  hgvsp: ENSP00000265026.3:p.Val60Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.178G>A
  hgvsp: ENSP00000389495.1:p.Val60Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8688G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 18915
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6032
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 30293
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 3.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val60Met
num of homozygotes: 3
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

3-185146548-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146548
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146548
    reference: chr 3
allele count: 1
allele frequency: 8.24715060946443e-6
allele num: 121254
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8687T>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.179T>G
  hgvsp: ENSP00000405163.1:p.Val60Gly
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.179T>G
  hgvsp: ENSP00000389798.1:p.Val60Gly
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.179T>G
  hgvsp: ENSP00000265026.3:p.Val60Gly
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.179T>G
  hgvsp: ENSP00000407361.1:p.Val60Gly
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.179T>G
  hgvsp: ENSP00000399910.1:p.Val60Gly
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.179T>G
  hgvsp: ENSP00000389495.1:p.Val60Gly
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.179T>G
  hgvsp: ENSP00000403561.1:p.Val60Gly
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8687T>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14685T>G
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val60Gly
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

3-185146549-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146549
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146549
    reference: chr 3
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.180G>C
  hgvsp: ENST00000424227.1:c.180G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8686G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.180G>C
  hgvsp: ENST00000447637.1:c.180G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.180G>C
  hgvsp: ENST00000433092.1:c.180G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.180G>C
  hgvsp: ENST00000428617.1:c.180G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.180G>C
  hgvsp: ENST00000438053.1:c.180G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.180G>C
  hgvsp: ENST00000265026.3:c.180G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8686G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14684G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.180G>C
  hgvsp: ENST00000439882.1:c.180G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val60Val
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP

3-185146551-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146551
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146551
    reference: chr 3
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.182A>G
  hgvsp: ENSP00000407361.1:p.His61Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8684A>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.182A>G
  hgvsp: ENSP00000403561.1:p.His61Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.182A>G
  hgvsp: ENSP00000405163.1:p.His61Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14682A>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.182A>G
  hgvsp: ENSP00000389495.1:p.His61Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.182A>G
  hgvsp: ENSP00000389798.1:p.His61Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8684A>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.182A>G
  hgvsp: ENSP00000265026.3:p.His61Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.182A>G
  hgvsp: ENSP00000399910.1:p.His61Arg
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6027
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19120
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His61Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

3-185146554-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146554
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146554
    reference: chr 3
allele count: 1
allele frequency: 8.24905548314718e-6
allele num: 121226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.185G>A
  hgvsp: ENSP00000399910.1:p.Ser62Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14679G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.185G>A
  hgvsp: ENSP00000405163.1:p.Ser62Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.185G>A
  hgvsp: ENSP00000389495.1:p.Ser62Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.185G>A
  hgvsp: ENSP00000265026.3:p.Ser62Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.185G>A
  hgvsp: ENSP00000407361.1:p.Ser62Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.185G>A
  hgvsp: ENSP00000403561.1:p.Ser62Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.185G>A
  hgvsp: ENSP00000389798.1:p.Ser62Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8681G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8681G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6053
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser62Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

3-185146557-C-CCGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146557
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146560
    reference: chr 3
allele count: 2
allele frequency: 1.649484536082474e-5
allele num: 121250
alternate allele: CCGT
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.190_192dupGTC
  hgvsp: ENSP00000399910.1:p.Val64dup
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.190_192dupGTC
  hgvsp: ENSP00000389798.1:p.Val64dup
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8676_44-8674dupGTC
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.190_192dupGTC
  hgvsp: ENSP00000265026.3:p.Val64dup
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.190_192dupGTC
  hgvsp: ENSP00000407361.1:p.Val64dup
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8676_44-8674dupGTC
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.190_192dupGTC
  hgvsp: ENSP00000403561.1:p.Val64dup
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14674_39-14672dupGTC
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.190_192dupGTC
  hgvsp: ENSP00000405163.1:p.Val64dup
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.190_192dupGTC
  hgvsp: ENSP00000389495.1:p.Val64dup
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19225
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val64dup
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

3-185146558-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146558
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146558
    reference: chr 3
allele count: 3
allele frequency: 2.474879968321537e-5
allele num: 121218
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.189C>G
  hgvsp: ENST00000424227.1:c.189C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.189C>G
  hgvsp: ENST00000438053.1:c.189C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.189C>G
  hgvsp: ENST00000265026.3:c.189C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8677C>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.189C>G
  hgvsp: ENST00000447637.1:c.189C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.189C>G
  hgvsp: ENST00000433092.1:c.189C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.189C>G
  hgvsp: ENST00000428617.1:c.189C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8677C>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.189C>G
  hgvsp: ENST00000439882.1:c.189C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14675C>G
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19212
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6081
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro63Pro
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

3-185146558-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146558
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146558
    reference: chr 3
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8677C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.189C>T
  hgvsp: ENST00000439882.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.189C>T
  hgvsp: ENST00000447637.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8677C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.189C>T
  hgvsp: ENST00000265026.3:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.189C>T
  hgvsp: ENST00000424227.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.189C>T
  hgvsp: ENST00000433092.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.189C>T
  hgvsp: ENST00000438053.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.189C>T
  hgvsp: ENST00000428617.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14675C>T
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1483
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro63Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-185146559-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146559
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146559
    reference: chr 3
allele count: 3
allele frequency: 2.474716644944154e-5
allele num: 121226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.190G>A
  hgvsp: ENSP00000389495.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14674G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8676G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.190G>A
  hgvsp: ENSP00000389798.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.190G>A
  hgvsp: ENSP00000265026.3:p.Val64Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.190G>A
  hgvsp: ENSP00000399910.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.190G>A
  hgvsp: ENSP00000405163.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.190G>A
  hgvsp: ENSP00000403561.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.190G>A
  hgvsp: ENSP00000407361.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8676G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6507
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val64Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-185146567-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146567
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146567
    reference: chr 3
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.198A>G
  hgvsp: ENST00000265026.3:c.198A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8668A>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.198A>G
  hgvsp: ENST00000439882.1:c.198A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.198A>G
  hgvsp: ENST00000447637.1:c.198A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.198A>G
  hgvsp: ENST00000424227.1:c.198A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.198A>G
  hgvsp: ENST00000433092.1:c.198A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.198A>G
  hgvsp: ENST00000438053.1:c.198A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14666A>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.198A>G
  hgvsp: ENST00000428617.1:c.198A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8668A>G
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr66Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

3-185146573-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146573
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146573
    reference: chr 3
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.204G>C
  hgvsp: ENST00000447637.1:c.204G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.204G>C
  hgvsp: ENST00000433092.1:c.204G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8662G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.204G>C
  hgvsp: ENST00000438053.1:c.204G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.204G>C
  hgvsp: ENST00000265026.3:c.204G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.204G>C
  hgvsp: ENST00000424227.1:c.204G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.204G>C
  hgvsp: ENST00000428617.1:c.204G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14660G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8662G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.204G>C
  hgvsp: ENST00000439882.1:c.204G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val68Val
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

3-185146578-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146578
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146578
    reference: chr 3
allele count: 2
allele frequency: 1.649947201689546e-5
allele num: 121216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.209C>T
  hgvsp: ENSP00000407361.1:p.Thr70Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8657C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.209C>T
  hgvsp: ENSP00000405163.1:p.Thr70Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14655C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.209C>T
  hgvsp: ENSP00000265026.3:p.Thr70Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.209C>T
  hgvsp: ENSP00000389495.1:p.Thr70Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.209C>T
  hgvsp: ENSP00000399910.1:p.Thr70Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.209C>T
  hgvsp: ENSP00000389798.1:p.Thr70Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8657C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.209C>T
  hgvsp: ENSP00000403561.1:p.Thr70Met
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr70Met
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ

3-185146579-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146579
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146579
    reference: chr 3
allele count: 3
allele frequency: 2.474798303938229e-5
allele num: 121222
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.210G>A
  hgvsp: ENST00000424227.1:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.210G>A
  hgvsp: ENST00000433092.1:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8656G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.210G>A
  hgvsp: ENST00000447637.1:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8656G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.210G>A
  hgvsp: ENST00000438053.1:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.210G>A
  hgvsp: ENST00000439882.1:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.210G>A
  hgvsp: ENST00000428617.1:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.210G>A
  hgvsp: ENST00000265026.3:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14654G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6193
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr70Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-185146581-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146581
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146581
    reference: chr 3
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.212G>T
  hgvsp: ENSP00000389798.1:p.Ser71Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.212G>T
  hgvsp: ENSP00000405163.1:p.Ser71Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.212G>T
  hgvsp: ENSP00000403561.1:p.Ser71Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14652G>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.212G>T
  hgvsp: ENSP00000389495.1:p.Ser71Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.212G>T
  hgvsp: ENSP00000265026.3:p.Ser71Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.212G>T
  hgvsp: ENSP00000399910.1:p.Ser71Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8654G>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8654G>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.212G>T
  hgvsp: ENSP00000407361.1:p.Ser71Ile
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser71Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-185146582-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146582
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146582
    reference: chr 3
allele count: 3
allele frequency: 2.474716644944154e-5
allele num: 121226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14651C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.213C>T
  hgvsp: ENST00000265026.3:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.213C>T
  hgvsp: ENST00000433092.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8653C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.213C>T
  hgvsp: ENST00000438053.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.213C>T
  hgvsp: ENST00000428617.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.213C>T
  hgvsp: ENST00000424227.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8653C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.213C>T
  hgvsp: ENST00000439882.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.213C>T
  hgvsp: ENST00000447637.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser71Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS

3-185146583-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146583
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146583
    reference: chr 3
allele count: 2
allele frequency: 1.650382888830209e-5
allele num: 121184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.214G>A
  hgvsp: ENSP00000405163.1:p.Val72Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.214G>A
  hgvsp: ENSP00000399910.1:p.Val72Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.214G>A
  hgvsp: ENSP00000265026.3:p.Val72Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.214G>A
  hgvsp: ENSP00000407361.1:p.Val72Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8652G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.214G>A
  hgvsp: ENSP00000389798.1:p.Val72Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.214G>A
  hgvsp: ENSP00000389495.1:p.Val72Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.214G>A
  hgvsp: ENSP00000403561.1:p.Val72Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8652G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14650G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19763
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val72Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

3-185146588-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146588
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146588
    reference: chr 3
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.219T>C
  hgvsp: ENST00000265026.3:c.219T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.219T>C
  hgvsp: ENST00000428617.1:c.219T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.219T>C
  hgvsp: ENST00000424227.1:c.219T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.219T>C
  hgvsp: ENST00000438053.1:c.219T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.219T>C
  hgvsp: ENST00000447637.1:c.219T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.219T>C
  hgvsp: ENST00000439882.1:c.219T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.219T>C
  hgvsp: ENST00000433092.1:c.219T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14645T>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8647T>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8647T>C
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser73Ser
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-185146598-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146598
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146598
    reference: chr 3
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.229A>C
  hgvsp: ENST00000424227.1:c.229A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.229A>C
  hgvsp: ENST00000265026.3:c.229A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.229A>C
  hgvsp: ENST00000447637.1:c.229A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8637A>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.229A>C
  hgvsp: ENST00000428617.1:c.229A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.229A>C
  hgvsp: ENST00000438053.1:c.229A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14635A>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8637A>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.229A>C
  hgvsp: ENST00000433092.1:c.229A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.229A>C
  hgvsp: ENST00000439882.1:c.229A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg77Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: A
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

3-185146600-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146600
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146600
    reference: chr 3
allele count: 5
allele frequency: 4.124119500486646e-5
allele num: 121238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.231G>A
  hgvsp: ENST00000428617.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.231G>A
  hgvsp: ENST00000439882.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.231G>A
  hgvsp: ENST00000447637.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14633G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8635G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.231G>A
  hgvsp: ENST00000433092.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.231G>A
  hgvsp: ENST00000438053.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.231G>A
  hgvsp: ENST00000265026.3:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.231G>A
  hgvsp: ENST00000424227.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8635G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3294
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Arg77Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-185146603-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146603
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146603
    reference: chr 3
allele count: 11
allele frequency: 9.071716038793956e-5
allele num: 121256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.234C>A
  hgvsp: ENSP00000399910.1:p.Asp78Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.234C>A
  hgvsp: ENSP00000403561.1:p.Asp78Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14630C>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.234C>A
  hgvsp: ENSP00000389798.1:p.Asp78Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.234C>A
  hgvsp: ENSP00000389495.1:p.Asp78Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.234C>A
  hgvsp: ENSP00000407361.1:p.Asp78Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.234C>A
  hgvsp: ENSP00000265026.3:p.Asp78Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.234C>A
  hgvsp: ENSP00000405163.1:p.Asp78Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8632C>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8632C>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6335
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20225
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp78Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

3-185146615-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146615
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146615
    reference: chr 3
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.246C>G
  hgvsp: ENSP00000399910.1:p.Asn82Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14618C>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.246C>G
  hgvsp: ENSP00000389798.1:p.Asn82Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.246C>G
  hgvsp: ENSP00000389495.1:p.Asn82Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.246C>G
  hgvsp: ENSP00000405163.1:p.Asn82Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.246C>G
  hgvsp: ENSP00000403561.1:p.Asn82Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8620C>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8620C>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.246C>G
  hgvsp: ENSP00000407361.1:p.Asn82Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.246C>G
  hgvsp: ENSP00000265026.3:p.Asn82Lys
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6421
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asn82Lys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

3-185146618-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146618
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146618
    reference: chr 3
allele count: 131
allele frequency: 1.080305454305553e-3
allele num: 121262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14615C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.249C>T
  hgvsp: ENST00000428617.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.249C>T
  hgvsp: ENST00000433092.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.249C>T
  hgvsp: ENST00000438053.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.249C>T
  hgvsp: ENST00000439882.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.249C>T
  hgvsp: ENST00000447637.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.249C>T
  hgvsp: ENST00000265026.3:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.249C>T
  hgvsp: ENST00000424227.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8617C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8617C>T
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 20548
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28486
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser83Ser
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

3-185146619-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146619
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146619
    reference: chr 3
allele count: 4
allele frequency: 3.298261816022956e-5
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8616G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.250G>A
  hgvsp: ENSP00000403561.1:p.Val84Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.250G>A
  hgvsp: ENSP00000389495.1:p.Val84Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.250G>A
  hgvsp: ENSP00000407361.1:p.Val84Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.250G>A
  hgvsp: ENSP00000265026.3:p.Val84Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.250G>A
  hgvsp: ENSP00000389798.1:p.Val84Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.250G>A
  hgvsp: ENSP00000399910.1:p.Val84Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14614G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8616G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.250G>A
  hgvsp: ENSP00000405163.1:p.Val84Ile
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20652
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val84Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

3-185146623-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146623
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146623
    reference: chr 3
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.254T>C
  hgvsp: ENSP00000265026.3:p.Leu85Pro
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8612T>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.254T>C
  hgvsp: ENSP00000407361.1:p.Leu85Pro
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8612T>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.254T>C
  hgvsp: ENSP00000389798.1:p.Leu85Pro
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14610T>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.254T>C
  hgvsp: ENSP00000399910.1:p.Leu85Pro
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.254T>C
  hgvsp: ENSP00000405163.1:p.Leu85Pro
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.254T>C
  hgvsp: ENSP00000389495.1:p.Leu85Pro
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.254T>C
  hgvsp: ENSP00000403561.1:p.Leu85Pro
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6571
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu85Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

3-185146627-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146627
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146627
    reference: chr 3
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14606G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8608G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.258G>C
  hgvsp: ENSP00000389798.1:p.Gln86His
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.258G>C
  hgvsp: ENSP00000389495.1:p.Gln86His
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.258G>C
  hgvsp: ENSP00000407361.1:p.Gln86His
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.258G>C
  hgvsp: ENSP00000265026.3:p.Gln86His
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8608G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.258G>C
  hgvsp: ENSP00000399910.1:p.Gln86His
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.258G>C
  hgvsp: ENSP00000403561.1:p.Gln86His
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.258G>C
  hgvsp: ENSP00000405163.1:p.Gln86His
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln86His
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/3-185146635-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146635
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146636
    reference: chr 3
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.266_267insC
  hgvsp: ENSP00000407361.1:p.Glu89AspfsTer4
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.266_267insC
  hgvsp: ENSP00000265026.3:p.Glu89AspfsTer4
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.266_267insC
  hgvsp: ENSP00000389798.1:p.Glu89AspfsTer4
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8600_44-8599insC
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.266_267insC
  hgvsp: ENSP00000399910.1:p.Glu89AspfsTer4
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.266_267insC
  hgvsp: ENSP00000405163.1:p.Glu89AspfsTer4
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14598_39-14597insC
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.266_267insC
  hgvsp: ENSP00000389495.1:p.Glu89AspfsTer4
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8600_44-8599insC
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.266_267insC
  hgvsp: ENSP00000403561.1:p.Glu89AspfsTer4
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu89AspfsTer4
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

3-185146639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146639
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146639
    reference: chr 3
allele count: 10
allele frequency: 8.243207596940122e-5
allele num: 121312
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.270C>T
  hgvsp: ENST00000433092.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.270C>T
  hgvsp: ENST00000439882.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.270C>T
  hgvsp: ENST00000447637.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8596C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.270C>T
  hgvsp: ENST00000438053.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14594C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.270C>T
  hgvsp: ENST00000424227.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.270C>T
  hgvsp: ENST00000265026.3:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.270C>T
  hgvsp: ENST00000428617.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8596C>T
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6585
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His90His
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD

3-185146640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146640
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146640
    reference: chr 3
allele count: 7
allele frequency: 5.770055062811171e-5
allele num: 121316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.271G>A
  hgvsp: ENSP00000399910.1:p.Asp91Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8595G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.271G>A
  hgvsp: ENSP00000389798.1:p.Asp91Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.271G>A
  hgvsp: ENSP00000403561.1:p.Asp91Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.271G>A
  hgvsp: ENSP00000265026.3:p.Asp91Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.271G>A
  hgvsp: ENSP00000407361.1:p.Asp91Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.271G>A
  hgvsp: ENSP00000389495.1:p.Asp91Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14593G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.271G>A
  hgvsp: ENSP00000405163.1:p.Asp91Asn
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8595G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20899
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp91Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-185146644-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146644
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146644
    reference: chr 3
allele count: 45
allele frequency: 3.708954239746802e-4
allele num: 121328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.275A>C
  hgvsp: ENSP00000405163.1:p.Glu92Ala
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8591A>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.275A>C
  hgvsp: ENSP00000389495.1:p.Glu92Ala
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.275A>C
  hgvsp: ENSP00000407361.1:p.Glu92Ala
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.275A>C
  hgvsp: ENSP00000403561.1:p.Glu92Ala
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.275A>C
  hgvsp: ENSP00000399910.1:p.Glu92Ala
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8591A>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.275A>C
  hgvsp: ENSP00000389798.1:p.Glu92Ala
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14589A>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.275A>C
  hgvsp: ENSP00000265026.3:p.Glu92Ala
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28384
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20905
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3374
  bin: 9.75e1
  variant carriers: 45
hgvs: p.Glu92Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

3-185146646-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146646
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146646
    reference: chr 3
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.277T>C
  hgvsp: ENSP00000265026.3:p.Ser93Pro
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.277T>C
  hgvsp: ENSP00000389798.1:p.Ser93Pro
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8589T>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.277T>C
  hgvsp: ENSP00000399910.1:p.Ser93Pro
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.277T>C
  hgvsp: ENSP00000403561.1:p.Ser93Pro
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.277T>C
  hgvsp: ENSP00000389495.1:p.Ser93Pro
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.277T>C
  hgvsp: ENSP00000407361.1:p.Ser93Pro
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14587T>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8589T>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.277T>C
  hgvsp: ENSP00000405163.1:p.Ser93Pro
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser93Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD

3-185146653-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146653
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146653
    reference: chr 3
allele count: 5
allele frequency: 4.121128200056047e-5
allele num: 121326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.284C>T
  hgvsp: ENSP00000389495.1:p.Thr95Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.284C>T
  hgvsp: ENSP00000405163.1:p.Thr95Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.284C>T
  hgvsp: ENSP00000407361.1:p.Thr95Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.284C>T
  hgvsp: ENSP00000403561.1:p.Thr95Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.284C>T
  hgvsp: ENSP00000265026.3:p.Thr95Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8582C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8582C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.284C>T
  hgvsp: ENSP00000399910.1:p.Thr95Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.284C>T
  hgvsp: ENSP00000389798.1:p.Thr95Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14580C>T
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr95Met
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

3-185146654-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146654
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146654
    reference: chr 3
allele count: 7
allele frequency: 5.769103975736797e-5
allele num: 121336
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.285G>A
  hgvsp: ENST00000424227.1:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.285G>A
  hgvsp: ENST00000439882.1:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.285G>A
  hgvsp: ENST00000433092.1:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8581G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.285G>A
  hgvsp: ENST00000438053.1:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14579G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.285G>A
  hgvsp: ENST00000447637.1:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.285G>A
  hgvsp: ENST00000265026.3:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.285G>A
  hgvsp: ENST00000428617.1:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8581G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28324
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2412
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr95Thr
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

3-185146654-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146654
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146654
    reference: chr 3
allele count: 3
allele frequency: 2.472473132458627e-5
allele num: 121336
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.285G>C
  hgvsp: ENST00000438053.1:c.285G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.285G>C
  hgvsp: ENST00000439882.1:c.285G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8581G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8581G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.285G>C
  hgvsp: ENST00000433092.1:c.285G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.285G>C
  hgvsp: ENST00000428617.1:c.285G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.285G>C
  hgvsp: ENST00000447637.1:c.285G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.285G>C
  hgvsp: ENST00000265026.3:c.285G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.285G>C
  hgvsp: ENST00000424227.1:c.285G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14579G>C
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28324
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr95Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

3-185146656-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146656
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146656
    reference: chr 3
allele count: 41
allele frequency: 3.379213714662491e-4
allele num: 121330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.287C>T
  hgvsp: ENSP00000389798.1:p.Ala96Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.287C>T
  hgvsp: ENSP00000265026.3:p.Ala96Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14577C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.287C>T
  hgvsp: ENSP00000405163.1:p.Ala96Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8579C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.287C>T
  hgvsp: ENSP00000403561.1:p.Ala96Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.287C>T
  hgvsp: ENSP00000407361.1:p.Ala96Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8579C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.287C>T
  hgvsp: ENSP00000399910.1:p.Ala96Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.287C>T
  hgvsp: ENSP00000389495.1:p.Ala96Val
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 20960
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala96Val
num of homozygotes: 1
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

3-185146660-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146660
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146660
    reference: chr 3
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.291G>A
  hgvsp: ENST00000438053.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8575G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.291G>A
  hgvsp: ENST00000433092.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.291G>A
  hgvsp: ENST00000424227.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.291G>A
  hgvsp: ENST00000447637.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8575G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.291G>A
  hgvsp: ENST00000428617.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.291G>A
  hgvsp: ENST00000265026.3:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.291G>A
  hgvsp: ENST00000439882.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14573G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val97Val
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

3-185146662-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146662
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146662
    reference: chr 3
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.293C>T
  hgvsp: ENSP00000389495.1:p.Ser98Phe
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8573C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.293C>T
  hgvsp: ENSP00000407361.1:p.Ser98Phe
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.293C>T
  hgvsp: ENSP00000389798.1:p.Ser98Phe
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.293C>T
  hgvsp: ENSP00000403561.1:p.Ser98Phe
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.293C>T
  hgvsp: ENSP00000405163.1:p.Ser98Phe
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.293C>T
  hgvsp: ENSP00000265026.3:p.Ser98Phe
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.293C>T
  hgvsp: ENSP00000399910.1:p.Ser98Phe
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14571C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8573C>T
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser98Phe
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

3-185146667-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146667
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146667
    reference: chr 3
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.298G>C
  hgvsp: ENSP00000389798.1:p.Gly100Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.298G>C
  hgvsp: ENSP00000399910.1:p.Gly100Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8568G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.298G>C
  hgvsp: ENSP00000403561.1:p.Gly100Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.298G>C
  hgvsp: ENSP00000265026.3:p.Gly100Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.298G>C
  hgvsp: ENSP00000407361.1:p.Gly100Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8568G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14566G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.298G>C
  hgvsp: ENSP00000405163.1:p.Gly100Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.298G>C
  hgvsp: ENSP00000389495.1:p.Gly100Arg
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28295
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly100Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum

3-185146671-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146671
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146671
    reference: chr 3
allele count: 3
allele frequency: 2.471780505891077e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.302A>T
  hgvsp: ENSP00000405163.1:p.Asn101Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.302A>T
  hgvsp: ENSP00000389495.1:p.Asn101Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.302A>T
  hgvsp: ENSP00000265026.3:p.Asn101Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.302A>T
  hgvsp: ENSP00000407361.1:p.Asn101Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.302A>T
  hgvsp: ENSP00000389798.1:p.Asn101Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.302A>T
  hgvsp: ENSP00000399910.1:p.Asn101Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8564A>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.302A>T
  hgvsp: ENSP00000403561.1:p.Asn101Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8564A>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14562A>T
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28280
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn101Ile
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-185146675-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146675
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146675
    reference: chr 3
allele count: 2
allele frequency: 1.647826516824309e-5
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.306C>A
  hgvsp: ENSP00000399910.1:p.Ser102Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.306C>A
  hgvsp: ENSP00000265026.3:p.Ser102Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8560C>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.306C>A
  hgvsp: ENSP00000405163.1:p.Ser102Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14558C>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.306C>A
  hgvsp: ENSP00000389798.1:p.Ser102Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.306C>A
  hgvsp: ENSP00000407361.1:p.Ser102Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8560C>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.306C>A
  hgvsp: ENSP00000389495.1:p.Ser102Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.306C>A
  hgvsp: ENSP00000403561.1:p.Ser102Arg
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3357
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ser102Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

3-185146680-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146680
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146680
    reference: chr 3
allele count: 13
allele frequency: 1.071175491504754e-4
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.311C>T
  hgvsp: ENSP00000399910.1:p.Thr104Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.311C>T
  hgvsp: ENSP00000403561.1:p.Thr104Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8555C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14553C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.311C>T
  hgvsp: ENSP00000407361.1:p.Thr104Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.311C>T
  hgvsp: ENSP00000389798.1:p.Thr104Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.311C>T
  hgvsp: ENSP00000389495.1:p.Thr104Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.311C>T
  hgvsp: ENSP00000405163.1:p.Thr104Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.311C>T
  hgvsp: ENSP00000265026.3:p.Thr104Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8555C>T
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6671
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr104Met
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-185146687-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146687
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146687
    reference: chr 3
allele count: 2
allele frequency: 1.647880825258717e-5
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.318C>T
  hgvsp: ENST00000439882.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8548C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.318C>T
  hgvsp: ENST00000428617.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.318C>T
  hgvsp: ENST00000265026.3:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.318C>T
  hgvsp: ENST00000433092.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.318C>T
  hgvsp: ENST00000424227.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14546C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.318C>T
  hgvsp: ENST00000438053.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.318C>T
  hgvsp: ENST00000447637.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8548C>T
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42770
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp106Asp
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS

3-185146688-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146688
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146688
    reference: chr 3
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.319G>A
  hgvsp: ENSP00000265026.3:p.Gly107Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8547G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.319G>A
  hgvsp: ENSP00000403561.1:p.Gly107Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14545G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.319G>A
  hgvsp: ENSP00000389495.1:p.Gly107Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8547G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.319G>A
  hgvsp: ENSP00000405163.1:p.Gly107Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.319G>A
  hgvsp: ENSP00000389798.1:p.Gly107Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.319G>A
  hgvsp: ENSP00000399910.1:p.Gly107Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.319G>A
  hgvsp: ENSP00000407361.1:p.Gly107Arg
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6635
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly107Arg
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP

3-185146689-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146689
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146689
    reference: chr 3
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.320G>A
  hgvsp: ENSP00000399910.1:p.Gly107Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8546G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.320G>A
  hgvsp: ENSP00000405163.1:p.Gly107Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.320G>A
  hgvsp: ENSP00000265026.3:p.Gly107Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.320G>A
  hgvsp: ENSP00000403561.1:p.Gly107Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.320G>A
  hgvsp: ENSP00000389495.1:p.Gly107Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8546G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14544G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.320G>A
  hgvsp: ENSP00000389798.1:p.Gly107Glu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.320G>A
  hgvsp: ENSP00000407361.1:p.Gly107Glu
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6679
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly107Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-185146696-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146696
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146696
    reference: chr 3
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.327C>T
  hgvsp: ENST00000438053.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.327C>T
  hgvsp: ENST00000428617.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.327C>T
  hgvsp: ENST00000424227.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.327C>T
  hgvsp: ENST00000439882.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8539C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14537C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.327C>T
  hgvsp: ENST00000265026.3:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.327C>T
  hgvsp: ENST00000433092.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8539C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.327C>T
  hgvsp: ENST00000447637.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser109Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum

3-185146699-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146699
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146699
    reference: chr 3
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8536A>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.330A>G
  hgvsp: ENST00000439882.1:c.330A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8536A>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.330A>G
  hgvsp: ENST00000265026.3:c.330A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.330A>G
  hgvsp: ENST00000438053.1:c.330A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.330A>G
  hgvsp: ENST00000424227.1:c.330A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.330A>G
  hgvsp: ENST00000433092.1:c.330A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.330A>G
  hgvsp: ENST00000447637.1:c.330A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.330A>G
  hgvsp: ENST00000428617.1:c.330A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14534A>G
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr110Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

3-185146702-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146702
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146702
    reference: chr 3
allele count: 19167
allele frequency: 1.579793284209485e-1
allele num: 121326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.333C>T
  hgvsp: ENST00000428617.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8533C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.333C>T
  hgvsp: ENST00000438053.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389495
  ensembl transcript: ENST00000447637
  gene symbol: MAP3K13
  hgvsc: ENST00000447637.1:c.333C>T
  hgvsp: ENST00000447637.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.333C>T
  hgvsp: ENST00000433092.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.333C>T
  hgvsp: ENST00000439882.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.333C>T
  hgvsp: ENST00000265026.3:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.333C>T
  hgvsp: ENST00000424227.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14531C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8533C>T
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 7.25e1
  variant carriers: 1246
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 5.25e1
  variant carriers: 1441
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.25e1
  variant carriers: 841
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 3.75e1
  variant carriers: 570
genotype depth: GenotypeDepth
  all individuals: 16617
  bin: 2.75e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.75e1
  variant carriers: 655
genotype depth: GenotypeDepth
  all individuals: 4147
  bin: 3.25e1
  variant carriers: 299
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 9.25e1
  variant carriers: 456
genotype depth: GenotypeDepth
  all individuals: 21007
  bin: 2.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 828
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 5.75e1
  variant carriers: 1608
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 4.75e1
  variant carriers: 1169
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 6.75e1
  variant carriers: 1411
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 6.25e1
  variant carriers: 1576
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4160
  bin: 9.75e1
  variant carriers: 4144
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.75e1
  variant carriers: 976
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 6
hgvs: p.Ser111Ser
num of homozygotes: 1737
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

3-185146713-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146713
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146713
    reference: chr 3
allele count: 10
allele frequency: 8.238182327451271e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14520A>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8522A>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.344A>T
  hgvsp: ENSP00000399910.1:p.Asp115Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.344A>T
  hgvsp: ENSP00000405163.1:p.Asp115Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.344A>T
  hgvsp: ENSP00000407361.1:p.Asp115Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.344A>T
  hgvsp: ENSP00000403561.1:p.Asp115Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.344A>T
  hgvsp: ENSP00000389798.1:p.Asp115Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8522A>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.344A>T
  hgvsp: ENSP00000265026.3:p.Asp115Val
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp115Val
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

3-185146717-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146717
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146717
    reference: chr 3
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.348A>G
  hgvsp: ENSP00000389798.1:p.Ile116Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.348A>G
  hgvsp: ENSP00000407361.1:p.Ile116Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.348A>G
  hgvsp: ENSP00000403561.1:p.Ile116Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.348A>G
  hgvsp: ENSP00000399910.1:p.Ile116Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.348A>G
  hgvsp: ENSP00000265026.3:p.Ile116Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8518A>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8518A>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.348A>G
  hgvsp: ENSP00000405163.1:p.Ile116Met
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14516A>G
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6362
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile116Met
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-185146724-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146724
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146724
    reference: chr 3
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.355C>A
  hgvsp: ENSP00000405163.1:p.Gln119Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14509C>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.355C>A
  hgvsp: ENSP00000389798.1:p.Gln119Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8511C>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.355C>A
  hgvsp: ENSP00000403561.1:p.Gln119Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.355C>A
  hgvsp: ENSP00000399910.1:p.Gln119Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.355C>A
  hgvsp: ENSP00000265026.3:p.Gln119Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.355C>A
  hgvsp: ENSP00000407361.1:p.Gln119Lys
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8511C>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48179
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1247
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln119Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

3-185146726-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146726
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146726
    reference: chr 3
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.357G>T
  hgvsp: ENSP00000403561.1:p.Gln119His
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.357G>T
  hgvsp: ENSP00000407361.1:p.Gln119His
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.357G>T
  hgvsp: ENSP00000399910.1:p.Gln119His
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.357G>T
  hgvsp: ENSP00000405163.1:p.Gln119His
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.357G>T
  hgvsp: ENSP00000389798.1:p.Gln119His
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8509G>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8509G>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14507G>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.357G>T
  hgvsp: ENSP00000265026.3:p.Gln119His
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln119His
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ

3-185146727-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146727
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146727
    reference: chr 3
allele count: 5
allele frequency: 4.11936265221045e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.358T>A
  hgvsp: ENSP00000405163.1:p.Phe120Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.358T>A
  hgvsp: ENSP00000389798.1:p.Phe120Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.358T>A
  hgvsp: ENSP00000265026.3:p.Phe120Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8508T>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.358T>A
  hgvsp: ENSP00000403561.1:p.Phe120Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.358T>A
  hgvsp: ENSP00000399910.1:p.Phe120Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8508T>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.358T>A
  hgvsp: ENSP00000407361.1:p.Phe120Ile
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14506T>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6365
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48200
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Phe120Ile
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

3-185146732-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146732
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146732
    reference: chr 3
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.363C>T
  hgvsp: ENST00000433092.1:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8503C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8503C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.363C>T
  hgvsp: ENST00000428617.1:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.363C>T
  hgvsp: ENST00000438053.1:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.363C>T
  hgvsp: ENST00000439882.1:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14501C>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.363C>T
  hgvsp: ENST00000424227.1:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.363C>T
  hgvsp: ENST00000265026.3:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 7.75e1
  variant carriers: 0
hgvs: c.363C>T
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-185146735-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146735
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146735
    reference: chr 3
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8500G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.366G>A
  hgvsp: ENST00000438053.1:c.366G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.366G>A
  hgvsp: ENST00000424227.1:c.366G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.366G>A
  hgvsp: ENST00000439882.1:c.366G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14498G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.366G>A
  hgvsp: ENST00000428617.1:c.366G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.365+1G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8500G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.366G>A
  hgvsp: ENST00000265026.3:c.366G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
hgvs: c.365+1G>A
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

3-185146739-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146739
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146739
    reference: chr 3
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.370G>A
  hgvsp: ENSP00000407361.1:p.Gly124Ser
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.370G>A
  hgvsp: ENSP00000405163.1:p.Gly124Ser
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.365+5G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.370G>A
  hgvsp: ENSP00000399910.1:p.Gly124Ser
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.370G>A
  hgvsp: ENSP00000403561.1:p.Gly124Ser
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.370G>A
  hgvsp: ENSP00000265026.3:p.Gly124Ser
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8496G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14494G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8496G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly124Ser
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

3-185146743-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146743
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146743
    reference: chr 3
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.374G>C
  hgvsp: ENSP00000399910.1:p.Ser125Thr
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.374G>C
  hgvsp: ENSP00000405163.1:p.Ser125Thr
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.374G>C
  hgvsp: ENSP00000265026.3:p.Ser125Thr
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.365+9G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8492G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14490G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8492G>C
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.374G>C
  hgvsp: ENSP00000407361.1:p.Ser125Thr
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.374G>C
  hgvsp: ENSP00000403561.1:p.Ser125Thr
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1308
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser125Thr
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

3-185146750-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146750
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146750
    reference: chr 3
allele count: 22
allele frequency: 1.815211472136504e-4
allele num: 121198
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.381T>G
  hgvsp: ENSP00000399910.1:p.Ser127Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8485T>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14483T>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.381T>G
  hgvsp: ENSP00000403561.1:p.Ser127Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.381T>G
  hgvsp: ENSP00000405163.1:p.Ser127Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.381T>G
  hgvsp: ENSP00000265026.3:p.Ser127Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.365+16T>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.381T>G
  hgvsp: ENSP00000407361.1:p.Ser127Arg
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8485T>G
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7824
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 26112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 1
hgvs: p.Ser127Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

3-185146751-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146751
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146751
    reference: chr 3
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14482G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.382G>A
  hgvsp: ENSP00000407361.1:p.Gly128Ser
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8484G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.382G>A
  hgvsp: ENSP00000399910.1:p.Gly128Ser
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.365+17G>A
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.382G>A
  hgvsp: ENSP00000265026.3:p.Gly128Ser
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.382G>A
  hgvsp: ENSP00000403561.1:p.Gly128Ser
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.382G>A
  hgvsp: ENSP00000405163.1:p.Gly128Ser
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8484G>A
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6460
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly128Ser
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

3-185146753-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146753
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146753
    reference: chr 3
allele count: 20
allele frequency: 1.650137786505173e-4
allele num: 121202
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.384T>G
  hgvsp: ENST00000439882.1:c.384T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.384T>G
  hgvsp: ENST00000424227.1:c.384T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8482T>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.384T>G
  hgvsp: ENST00000265026.3:c.384T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.384T>G
  hgvsp: ENST00000428617.1:c.384T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.365+19T>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.384T>G
  hgvsp: ENST00000438053.1:c.384T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8482T>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14480T>G
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly128Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

3-185146757-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146757
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146757
    reference: chr 3
allele count: 19
allele frequency: 1.567579162747719e-4
allele num: 121206
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.388T>G
  hgvsp: ENSP00000265026.3:p.Phe130Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8478T>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000405163
  ensembl transcript: ENST00000428617
  gene symbol: MAP3K13
  hgvsc: ENST00000428617.1:c.388T>G
  hgvsp: ENSP00000405163.1:p.Phe130Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.388T>G
  hgvsp: ENSP00000407361.1:p.Phe130Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.365+23T>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.388T>G
  hgvsp: ENSP00000399910.1:p.Phe130Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8478T>G
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.388T>G
  hgvsp: ENSP00000403561.1:p.Phe130Val
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14476T>G
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6427
  bin: 6.75e1
  variant carriers: 1
hgvs: p.Phe130Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

3-185146790-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 185146790
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 185146790
    reference: chr 3
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000399910
  ensembl transcript: ENST00000424227
  gene symbol: MAP3K13
  hgvsc: ENST00000424227.1:c.421G>T
  hgvsp: ENSP00000399910.1:p.Val141Leu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000409325
  ensembl transcript: ENST00000443863
  gene symbol: MAP3K13
  hgvsc: ENST00000443863.1:c.44-8445G>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000407361
  ensembl transcript: ENST00000439882
  gene symbol: MAP3K13
  hgvsc: ENST00000439882.1:c.421G>T
  hgvsp: ENSP00000407361.1:p.Val141Leu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000389798
  ensembl transcript: ENST00000433092
  gene symbol: MAP3K13
  hgvsc: ENST00000433092.1:c.365+56G>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000265026
  ensembl transcript: ENST00000265026
  gene symbol: MAP3K13
  hgvsc: ENST00000265026.3:c.421G>T
  hgvsp: ENSP00000265026.3:p.Val141Leu
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000439257
  ensembl transcript: ENST00000535426
  gene symbol: MAP3K13
  hgvsc: ENST00000535426.1:c.44-8445G>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000411483
  ensembl transcript: ENST00000446828
  gene symbol: MAP3K13
  hgvsc: ENST00000446828.1:c.39-14443G>T
  variant of: http://identifiers.org/hgnc/6852
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000073803
  ensembl protein: ENSP00000403561
  ensembl transcript: ENST00000438053
  gene symbol: MAP3K13
  hgvsc: ENST00000438053.1:c.421G>T
  hgvsp: ENSP00000403561.1:p.Val141Leu
  variant of: http://identifiers.org/hgnc/6852
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val141Leu
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 6582
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42653
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3273
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2294
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1972
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.94e-1

FS
type: SiteQuality
SIO_000300: 3.117e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.87e-1

QD
type: SiteQuality
SIO_000300: 1.456e1

DP
type: SiteQuality
SIO_000300: 1.578137e6

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42613
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2298
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6576
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3273
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1977
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1506
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.368e1

MQRankSum
type: SiteQuality
SIO_000300: -7.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

DP
type: SiteQuality
SIO_000300: 1.578559e6

FS
type: SiteQuality
SIO_000300: 1.106e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.48e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

GenotypeQuality
all individuals: 42335
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1506
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2295
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3273
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.318571759795966e-4
allele num: 8626
num of homozygotes: 1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

FS
type: SiteQuality
SIO_000300: 1.3827e1

DP
type: SiteQuality
SIO_000300: 1.578224e6

QD
type: SiteQuality
SIO_000300: 2.39e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.192e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.04e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.454e-1

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 7
bin: 2.5e0
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 3273
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.04e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

DP
type: SiteQuality
SIO_000300: 1.578224e6

FS
type: SiteQuality
SIO_000300: 1.3827e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.192e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

QD
type: SiteQuality
SIO_000300: 2.39e1

VQSLOD
type: SiteQuality
SIO_000300: -1.454e-1

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 194
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variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999850007499625e-5
allele num: 66670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.087999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.28e-1

DP
type: SiteQuality
SIO_000300: 1.578513e6

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

QD
type: SiteQuality
SIO_000300: 1.545e1

GenotypeQuality
all individuals: 42282
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variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 700
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 172
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6564
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999490086685263e-5
allele num: 66678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

DP
type: SiteQuality
SIO_000300: 1.578414e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.152e1

FS
type: SiteQuality
SIO_000300: 1.1558e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.674e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.194e0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
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variant carriers: 0

GenotypeQuality
all individuals: 150
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variant carriers: 0

GenotypeQuality
all individuals: 168
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 64
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 139
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variant carriers: 0

GenotypeQuality
all individuals: 1990
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variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6570
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2297
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3327
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 42314
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.349851516333203e-4
allele num: 66674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.52e0

QD
type: SiteQuality
SIO_000300: 1.478e1

MQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.580641e6

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.95e-1

GenotypeQuality
all individuals: 177
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1990
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 4
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 57

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2297
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 56
allele frequency: 5.385651086747451e-3
allele num: 10398
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731601731601732e-4
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.580641e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

QD
type: SiteQuality
SIO_000300: 1.478e1

MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 6.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1987
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variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.578715e6

MQRankSum
type: SiteQuality
SIO_000300: 1.27e-1

FS
type: SiteQuality
SIO_000300: 1.014e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.686e0

QD
type: SiteQuality
SIO_000300: 8.75e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

VQSLOD
type: SiteQuality
SIO_000300: 3.85e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 868
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GenotypeQuality
all individuals: 1954
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 170
allele frequency: 2.550102004080163e-3
allele num: 66664
num of homozygotes: 1

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 53
allele frequency: 8.015728977616455e-3
allele num: 6612
num of homozygotes: 2

DP
type: SiteQuality
SIO_000300: 1.5849e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.86e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.395e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

GenotypeQuality
all individuals: 215
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3266
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42244
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2299
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: -6.909999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e-1

FS
type: SiteQuality
SIO_000300: 7.538e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.809e0

DP
type: SiteQuality
SIO_000300: 1.57967e6

QD
type: SiteQuality
SIO_000300: 1.473e1

GenotypeQuality
all individuals: 1963
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3266
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 292
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2295
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6523
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41853
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.179e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.574e0

QD
type: SiteQuality
SIO_000300: 1.093e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.0146e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.579672e6

GenotypeQuality
all individuals: 212
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41990
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 695
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variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3268
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6532
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.04e0

MQRankSum
type: SiteQuality
SIO_000300: -4.61e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e-1

DP
type: SiteQuality
SIO_000300: 1.579646e6

GenotypeQuality
all individuals: 2293
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41799
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1488
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3267
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6508
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.856e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.15e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.085e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.386e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-2

QD
type: SiteQuality
SIO_000300: 2.84e0

DP
type: SiteQuality
SIO_000300: 1.581701e6

GenotypeQuality
all individuals: 1953
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3269
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2285
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 1489
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6524
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 874
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41875
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

DP
type: SiteQuality
SIO_000300: 1.580362e6

MQRankSum
type: SiteQuality
SIO_000300: -3.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.303e0

MQ
type: SiteQuality
SIO_000300: 5.79e1

FS
type: SiteQuality
SIO_000300: 3.33e0

VQSLOD
type: SiteQuality
SIO_000300: 2.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

QD
type: SiteQuality
SIO_000300: 1.44e1

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1948
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6499
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41817
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3273
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.500855162480871e-5
allele num: 66654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.581381e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.72e-1

FS
type: SiteQuality
SIO_000300: 1.744e0

VQSLOD
type: SiteQuality
SIO_000300: 9.92e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

QD
type: SiteQuality
SIO_000300: 1.177e1

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

GenotypeQuality
all individuals: 168
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6499
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41817
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3273
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1948
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2273
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.177e1

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

FS
type: SiteQuality
SIO_000300: 1.744e0

DP
type: SiteQuality
SIO_000300: 1.581381e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.72e-1

GenotypeQuality
all individuals: 146
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.25e1
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GenotypeQuality
all individuals: 3273
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 872
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 272
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41873
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73190162798753e-4
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

QD
type: SiteQuality
SIO_000300: 8.869999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

FS
type: SiteQuality
SIO_000300: 5.38e-1

DP
type: SiteQuality
SIO_000300: 1.581047e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.69e-1

GenotypeQuality
all individuals: 1956
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 873
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3271
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.984e1

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 1.264e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

MQ
type: SiteQuality
SIO_000300: 5.705e1

DP
type: SiteQuality
SIO_000300: 1.580982e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e0

VQSLOD
type: SiteQuality
SIO_000300: -1.079e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1940
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.581468e6

FS
type: SiteQuality
SIO_000300: 2.993e0

QD
type: SiteQuality
SIO_000300: 1.884e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

VQSLOD
type: SiteQuality
SIO_000300: -1.921e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.779e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
all individuals: 205
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 490
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3273
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6432
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

FS
type: SiteQuality
SIO_000300: 2.014e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.55e-1

DP
type: SiteQuality
SIO_000300: 1.583149e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.679999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.08e-1

QD
type: SiteQuality
SIO_000300: 1.004e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.714e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeQuality
all individuals: 1484
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 434
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variant carriers: 0

GenotypeQuality
all individuals: 288
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GenotypeQuality
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GenotypeQuality
all individuals: 6
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 1949
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variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000660145231951e-5
allele num: 66652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.62e-1

QD
type: SiteQuality
SIO_000300: 1.321e1

VQSLOD
type: SiteQuality
SIO_000300: 8.46e-1

DP
type: SiteQuality
SIO_000300: 1.583838e6

MQ
type: SiteQuality
SIO_000300: 5.939e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

FS
type: SiteQuality
SIO_000300: 1.833e0

MQRankSum
type: SiteQuality
SIO_000300: -5.590000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.77e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 700
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.994e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.19e-2

QD
type: SiteQuality
SIO_000300: 9.77e0

DP
type: SiteQuality
SIO_000300: 1.583865e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.967e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.500180007200288e-5
allele num: 66664
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

DP
type: SiteQuality
SIO_000300: 1.584795e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.91e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.01e-1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -2.08e-1

QD
type: SiteQuality
SIO_000300: 1.138e1

FS
type: SiteQuality
SIO_000300: 4.708e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1954
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.586181e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

FS
type: SiteQuality
SIO_000300: 2.099e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -4.708e-1

BaseQRankSum
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SIO_000300: -1.75e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
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SIO_000300: -1.04e0

MQ
type: SiteQuality
SIO_000300: 5.894e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.39e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 227
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GenotypeQuality
all individuals: 1973
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GenotypeQuality
all individuals: 256
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.924e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

QD
type: SiteQuality
SIO_000300: 1.188e1

DP
type: SiteQuality
SIO_000300: 1.586378e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e-1

GenotypeQuality
all individuals: 892
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 3292
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.590652e6

QD
type: SiteQuality
SIO_000300: 1.019e1

MQRankSum
type: SiteQuality
SIO_000300: -1.046e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.0e-2

MQ
type: SiteQuality
SIO_000300: 5.964e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.91e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.999880002399952e-5
allele num: 66668
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

DP
type: SiteQuality
SIO_000300: 1.591337e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.621e0

QD
type: SiteQuality
SIO_000300: 1.166e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: 7.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.46e-1

FS
type: SiteQuality
SIO_000300: 5.108e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.058099268949596e-3
allele num: 10396
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

FS
type: SiteQuality
SIO_000300: 1.764e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 1.412e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.144e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

DP
type: SiteQuality
SIO_000300: 1.592639e6

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1991
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
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GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 160
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GenotypeQuality
all individuals: 132
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GenotypeQuality
all individuals: 272
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GenotypeQuality
all individuals: 3302
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1554
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 2.428e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.262e1

DP
type: SiteQuality
SIO_000300: 1.59729e6

VQSLOD
type: SiteQuality
SIO_000300: -1.13e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.549e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 3415
bin: 9.75e1
variant carriers: 131

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 153
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 110
allele frequency: 1.05708245243129e-2
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.465003465003465e-4
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.100021000210002e-4
allele num: 66666
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.109e0

MQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

DP
type: SiteQuality
SIO_000300: 1.605089e6

VQSLOD
type: SiteQuality
SIO_000300: 6.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.311e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3318
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 897
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.498965237995261e-5
allele num: 66682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.694e0

DP
type: SiteQuality
SIO_000300: 1.600006e6

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.259e1

VQSLOD
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SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 900
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2008
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GenotypeQuality
all individuals: 1574
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GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.843e1

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.120000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.71e-1

DP
type: SiteQuality
SIO_000300: 1.600815e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 5.447e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

QD
type: SiteQuality
SIO_000300: 1.643e1

VQSLOD
type: SiteQuality
SIO_000300: -1.615e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 3324
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.602338e6

InbreedingCoeff
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SIO_000300: -4.0e-4

VQSLOD
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SIO_000300: -1.808e-1

ReadPosRankSum
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SIO_000300: -1.158e0

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-1

FS
type: SiteQuality
SIO_000300: 5.805e0

BaseQRankSum
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SIO_000300: -1.766e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e0

QD
type: SiteQuality
SIO_000300: 1.42e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.515e0

DP
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SIO_000300: 1.603772e6

FS
type: SiteQuality
SIO_000300: 2.872e0

VQSLOD
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SIO_000300: 1.78e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.353e0

QD
type: SiteQuality
SIO_000300: 1.27e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2024
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.349406261245052e-4
allele num: 66696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 1.605215e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.791e0

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

FS
type: SiteQuality
SIO_000300: 1.878e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

QD
type: SiteQuality
SIO_000300: 1.205e1

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.496476655971693e-5
allele num: 66698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e-1

BaseQRankSum
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SIO_000300: 1.0e0

QD
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SIO_000300: 1.373e1

VQSLOD
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SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 1.605275e6

FS
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 45
allele frequency: 2.725951054034407e-3
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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FS
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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SIO_000300: -4.4e-2

MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
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allele count: 0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e0

MQRankSum
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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MQ
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FS
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.07e0

QD
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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DP
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MQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 5.924e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3349
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

African
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allele count: 4
allele frequency: 3.843936190659235e-4
allele num: 10406
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729505361466621e-4
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

ClippingRankSum
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SIO_000300: -4.43e-1

FS
type: SiteQuality
SIO_000300: 5.24e-1

MQRankSum
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SIO_000300: -2.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 1.607907e6

QD
type: SiteQuality
SIO_000300: 1.234e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.07e-1

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.07e-1

DP
type: SiteQuality
SIO_000300: 1.607907e6

QD
type: SiteQuality
SIO_000300: 1.234e1

MQRankSum
type: SiteQuality
SIO_000300: -2.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 5.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 39

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
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allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 40
allele frequency: 5.996641880546894e-4
allele num: 66704
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.061e0

QD
type: SiteQuality
SIO_000300: 1.183e1

MQRankSum
type: SiteQuality
SIO_000300: -9.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 5.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

DP
type: SiteQuality
SIO_000300: 1.609478e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.52e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2047
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 915
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GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.13e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 2.017e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.493e0

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 1.608197e6

QD
type: SiteQuality
SIO_000300: 1.352e1

GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 3343
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variant carriers: 1

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

MQ
type: SiteQuality
SIO_000300: 5.858e1

VQSLOD
type: SiteQuality
SIO_000300: -1.914e0

FS
type: SiteQuality
SIO_000300: 9.186999999999999e0

DP
type: SiteQuality
SIO_000300: 1.608329e6

QD
type: SiteQuality
SIO_000300: 1.721e1

ReadPosRankSum
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SIO_000300: 2.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.018e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.393e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.503e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

BaseQRankSum
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.608798e6

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

MQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
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DP
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.27e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997512064986062e-5
allele num: 66722
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

QD
type: SiteQuality
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BaseQRankSum
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FS
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SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-2

DP
type: SiteQuality
SIO_000300: 1.609439e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.946e1

VQSLOD
type: SiteQuality
SIO_000300: 8.19e-1

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 13

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.156871818602499e-3
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.49667246237784e-5
allele num: 66716
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.5e-2

MQ
type: SiteQuality
SIO_000300: 5.939e1

FS
type: SiteQuality
SIO_000300: 3.264e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.609951e6

QD
type: SiteQuality
SIO_000300: 1.006e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2032
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997601918465228e-5
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.287e1

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.3e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.17e0

DP
type: SiteQuality
SIO_000300: 1.610575e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

FS
type: SiteQuality
SIO_000300: 2.157e0

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42784
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2034
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.516e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.577e0

MQRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.128e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-2

QD
type: SiteQuality
SIO_000300: 2.185e1

MQ
type: SiteQuality
SIO_000300: 5.888e1

DP
type: SiteQuality
SIO_000300: 1.610744e6

GenotypeQuality
all individuals: 1617
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2040
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3382
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 42787
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2412
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.610707e6

FS
type: SiteQuality
SIO_000300: 1.872e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-1

QD
type: SiteQuality
SIO_000300: 1.211e1

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.889e0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42770
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6634
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.532e0

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

DP
type: SiteQuality
SIO_000300: 1.611293e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.523e0

MQ
type: SiteQuality
SIO_000300: 5.805e1

QD
type: SiteQuality
SIO_000300: 1.139e1

FS
type: SiteQuality
SIO_000300: 1.183e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.93e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2419
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.611311e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.56e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.199e1

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 6

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 35330
bin: 6.25e1
variant carriers: 4

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
all individuals: 838
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variant carriers: 7

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 6
bin: 7.5e0
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GenotypeQuality
all individuals: 4094
bin: 6.75e1
variant carriers: 12

GenotypeQuality
all individuals: 34
bin: 2.25e1
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GenotypeQuality
all individuals: 199
bin: 8.75e1
variant carriers: 6

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 447
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variant carriers: 18

GenotypeQuality
all individuals: 809
bin: 7.75e1
variant carriers: 8

GenotypeQuality
all individuals: 219
bin: 9.25e1
variant carriers: 12

GenotypeQuality
all individuals: 18487
bin: 9.75e1
variant carriers: 17338

Latino
type: Population
allele count: 1326
allele frequency: 1.146067415730337e-1
allele num: 11570
num of homozygotes: 78

African
type: Population
allele count: 360
allele frequency: 3.460872909055951e-2
allele num: 10402
num of homozygotes: 5

European (Non-Finnish)
type: Population
allele count: 10020
allele frequency: 1.50197865451493e-1
allele num: 66712
num of homozygotes: 792

South Asian
type: Population
allele count: 3983
allele frequency: 2.412477286493034e-1
allele num: 16510
num of homozygotes: 500

European (Finnish)
type: Population
allele count: 1287
allele frequency: 1.948228882833787e-1
allele num: 6606
num of homozygotes: 123

East Asian
type: Population
allele count: 2019
allele frequency: 2.342227378190255e-1
allele num: 8620
num of homozygotes: 219

Other
type: Population
allele count: 172
allele frequency: 1.898454746136865e-1
allele num: 906
num of homozygotes: 20

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

FS
type: SiteQuality
SIO_000300: 5.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.05e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

DP
type: SiteQuality
SIO_000300: 2.584161e6

QD
type: SiteQuality
SIO_000300: 1.538e1

GenotypeQuality
all individuals: 6361
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 30
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 646
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 1314
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 48163
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 2193
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 342
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

African
type: Population
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
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allele count: 9
allele frequency: 5.450581395348837e-4
allele num: 16512
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

DP
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ReadPosRankSum
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SIO_000300: 5.13e-1

InbreedingCoeff
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SIO_000300: -2.0e-4

VQSLOD
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MQ
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SIO_000300: 5.959e1

BaseQRankSum
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SIO_000300: -1.006e0

MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

FS
type: SiteQuality
SIO_000300: 5.23e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
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SIO_000300: -1.73e-1

QD
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DP
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

FS
type: SiteQuality
SIO_000300: 5.265e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.106e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.669e0

QD
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SIO_000300: 6.63e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.957e0

VQSLOD
type: SiteQuality
SIO_000300: -8.938e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.12e-1

DP
type: SiteQuality
SIO_000300: 1.646627e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 1.0576e1

QD
type: SiteQuality
SIO_000300: 1.384e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994664748373947e-5
allele num: 66726
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.646854e6

VQSLOD
type: SiteQuality
SIO_000300: 3.54e0

MQRankSum
type: SiteQuality
SIO_000300: 5.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.28e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.481e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

DP
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MQ
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BaseQRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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FS
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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Latino
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Other
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South Asian
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MQ
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InbreedingCoeff
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QD
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Other
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MQ
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QD
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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European (Non-Finnish)
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allele num: 66722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.916e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.74e-1

DP
type: SiteQuality
SIO_000300: 1.646411e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

QD
type: SiteQuality
SIO_000300: 1.432e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.464e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 6440
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1294
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48760
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.5220700152207e-4
allele num: 6570
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.928268414963363e-4
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.851397184620464e-4
allele num: 66634
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.38e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.254e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.44e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

FS
type: SiteQuality
SIO_000300: 2.27217e2

QD
type: SiteQuality
SIO_000300: 2.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e0

DP
type: SiteQuality
SIO_000300: 1.631591e6

GenotypeQuality
all individuals: 48854
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1533
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 4.581e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

MQRankSum
type: SiteQuality
SIO_000300: 7.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.403e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-2

DP
type: SiteQuality
SIO_000300: 1.627851e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-2

QD
type: SiteQuality
SIO_000300: 1.423e1

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 62
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 48814
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6452
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1181
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1295
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1473
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 252
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.522997258604935e-4
allele num: 6566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.55079074513099e-4
allele num: 66646
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92789666473877e-4
allele num: 10374
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.237e0

FS
type: SiteQuality
SIO_000300: 1.89246e2

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.588e0

VQSLOD
type: SiteQuality
SIO_000300: -1.67e2

DP
type: SiteQuality
SIO_000300: 1.627044e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.348e0

QD
type: SiteQuality
SIO_000300: 3.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 5.9e1

GenotypeQuality
all individuals: 246
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 48831
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1278
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1378
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 560
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 58
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 2

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.529051987767584e-3
allele num: 6540
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.001170152119776e-5
allele num: 66658
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.72651e2

QD
type: SiteQuality
SIO_000300: 4.6e-1

DP
type: SiteQuality
SIO_000300: 1.620312e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.955e1

VQSLOD
type: SiteQuality
SIO_000300: -3.384e2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.145e0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6462
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 8.75e1
variant carriers: 0