2-240954226-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954226
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954226
    reference: chr 2
allele count: 15
allele frequency: 1.237848454339897e-4
allele num: 121178
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.599C>T
  hgvsp: ENSP00000385697.1:p.Pro200Leu
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3744C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.599C>T
  hgvsp: ENSP00000252711.2:p.Pro200Leu
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.719C>T
  hgvsp: ENSP00000302321.4:p.Pro240Leu
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*255C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.621C>T
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21045
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1562
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4783
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23152
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3291
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro200Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum

2-240954235-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954235
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954235
    reference: chr 2
allele count: 4
allele frequency: 3.301474108189306e-5
allele num: 121158
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.710A>G
  hgvsp: ENSP00000302321.4:p.Asp237Gly
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*246A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3735A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.590A>G
  hgvsp: ENSP00000385697.1:p.Asp197Gly
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.612A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.590A>G
  hgvsp: ENSP00000252711.2:p.Asp197Gly
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8258
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23142
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3468
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp197Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-240954236-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954236
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954236
    reference: chr 2
allele count: 4
allele frequency: 3.301474108189306e-5
allele num: 121158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.611G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*245G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.589G>A
  hgvsp: ENSP00000385697.1:p.Asp197Asn
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.589G>A
  hgvsp: ENSP00000252711.2:p.Asp197Asn
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.709G>A
  hgvsp: ENSP00000302321.4:p.Asp237Asn
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3734G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
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genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 13395
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3288
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4784
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23141
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp197Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD

2-240954237-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954237
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954237
    reference: chr 2
allele count: 3
allele frequency: 2.476228209191759e-5
allele num: 121152
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.588C>T
  hgvsp: ENST00000404554.1:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.610C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*244C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.708C>T
  hgvsp: ENST00000307300.4:c.708C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.588C>T
  hgvsp: ENST00000252711.2:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3733C>T
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3288
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23139
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4784
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys196Cys
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

2-240954237-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954237
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954237
    reference: chr 2
allele count: 7
allele frequency: 5.777865821447438e-5
allele num: 121152
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3733C>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.588C>G
  hgvsp: ENSP00000252711.2:p.Cys196Trp
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.588C>G
  hgvsp: ENSP00000385697.1:p.Cys196Trp
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.610C>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.708C>G
  hgvsp: ENSP00000302321.4:p.Cys236Trp
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*244C>G
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8260
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4784
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3288
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13391
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys196Trp
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

2-240954242-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954242
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954242
    reference: chr 2
allele count: 1
allele frequency: 8.254911672445104e-6
allele num: 121140
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3728A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.583A>G
  hgvsp: ENSP00000252711.2:p.Ile195Val
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*239A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.703A>G
  hgvsp: ENSP00000302321.4:p.Ile235Val
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.583A>G
  hgvsp: ENSP00000385697.1:p.Ile195Val
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.605A>G
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8257
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4785
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3467
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile195Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

2-240954248-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954248
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954248
    reference: chr 2
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.577G>A
  hgvsp: ENSP00000252711.2:p.Val193Ile
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*233G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.599G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.697G>A
  hgvsp: ENSP00000302321.4:p.Val233Ile
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.577G>A
  hgvsp: ENSP00000385697.1:p.Val193Ile
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3722G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3285
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23116
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2351
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val193Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum

2-240954249-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954249
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954249
    reference: chr 2
allele count: 2
allele frequency: 1.651254953764861e-5
allele num: 121120
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.576C>T
  hgvsp: ENST00000252711.2:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.576C>T
  hgvsp: ENST00000404554.1:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.696C>T
  hgvsp: ENST00000307300.4:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3721C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*232C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.598C>T
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23130
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3284
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser192Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

2-240954260-CGTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954260
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954257
    reference: chr 2
allele count: 1
allele frequency: 8.259820927082301e-6
allele num: 121068
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.584_586delAAC
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.562_564delAAC
  hgvsp: ENSP00000252711.2:p.Asn188del
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3707_547+3709delAAC
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.682_684delAAC
  hgvsp: ENSP00000302321.4:p.Asn228del
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.562_564delAAC
  hgvsp: ENSP00000385697.1:p.Asn188del
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*218_*220delAAC
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3280
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn188del
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: CGTT
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

2-240954261-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954261
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954261
    reference: chr 2
allele count: 2
allele frequency: 1.652127940787734e-5
allele num: 121056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*220C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.586C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3709C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.564C>T
  hgvsp: ENST00000252711.2:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.564C>T
  hgvsp: ENST00000404554.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.684C>T
  hgvsp: ENST00000307300.4:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3457
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3278
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4769
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asn188Asn
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

2-240954276-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954276
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954276
    reference: chr 2
allele count: 18
allele frequency: 1.488144449221204e-4
allele num: 120956
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.571T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.669T>C
  hgvsp: ENST00000307300.4:c.669T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*205T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.549T>C
  hgvsp: ENST00000404554.1:c.549T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3694T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.549T>C
  hgvsp: ENST00000252711.2:c.549T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20935
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6035
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13571
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4723
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23002
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
hgvs: c.549T>C
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum

2-240954282-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954282
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954282
    reference: chr 2
allele count: 1
allele frequency: 8.272940865018697e-6
allele num: 120876
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-5G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-5G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-5G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-5G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-5G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3688G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3388
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22901
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3214
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13320
  bin: 9.75e1
  variant carriers: 1
hgvs: c.548-5G>A
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

2-240954284-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954284
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954284
    reference: chr 2
allele count: 1
allele frequency: 8.273899157717065e-6
allele num: 120862
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3686G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-7G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-7G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-7G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-7G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-7G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20811
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22869
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3414
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8065
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1528
  bin: 8.75e1
  variant carriers: 0
hgvs: c.548-7G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

2-240954286-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954286
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954286
    reference: chr 2
allele count: 197
allele frequency: 1.630173940386939e-3
allele num: 120846
alternate allele: C
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-9A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3684A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-9A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-9A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  clinical significance: benign
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-9A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  clinical significance: benign
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-9A>G
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 4.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 6.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 20744
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 4.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5982
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 13366
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 5.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3202
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22767
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13369
  bin: 9.75e1
  variant carriers: 196
genotype quality: GenotypeQuality
  all individuals: 8052
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

2-240954292-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954292
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954292
    reference: chr 2
allele count: 8
allele frequency: 6.625588020936858e-5
allele num: 120744
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-15T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-15T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-15T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3678T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-15T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-15T>C
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13178
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13202
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4622
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22273
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-240954299-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954299
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954299
    reference: chr 2
allele count: 1
allele frequency: 8.292561572269675e-6
allele num: 120590
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3671G>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-22G>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-22G>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-22G>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-22G>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-22G>T
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13184
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3090
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7746
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

2-240954299-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954299
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954299
    reference: chr 2
allele count: 5
allele frequency: 4.146280786134837e-5
allele num: 120590
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-22G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-22G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-22G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3671G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-22G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-22G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3337
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3090
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

2-240954300-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954300
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954300
    reference: chr 2
allele count: 168
allele frequency: 1.393843856301336e-3
allele num: 120530
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-23C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-23C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-23C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-23C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3670C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-23C>T
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 3.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 19616
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6186
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12602
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 6.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4475
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7680
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 3
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

2-240954302-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954302
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954302
    reference: chr 2
allele count: 4
allele frequency: 3.3178500331785e-5
allele num: 120560
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-25A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3668A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-25A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-25A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-25A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-25A>G
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19416
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5806
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13130
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 7651
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

2-240954309-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954309
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954309
    reference: chr 2
allele count: 45
allele frequency: 3.73741736154945e-4
allele num: 120404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-32A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-32A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-32A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3661A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-32A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-32A>G
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18239
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6102
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11825
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4283
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3229
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 2
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

2-240954312-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954312
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954312
    reference: chr 2
allele count: 5
allele frequency: 4.154894465680572e-5
allele num: 120340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-35G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3658G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-35G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-35G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-35G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-35G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13103
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3214
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

2-240954323-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954323
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954323
    reference: chr 2
allele count: 4
allele frequency: 3.333833408344585e-5
allele num: 119982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-46G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-46G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-46G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3647G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-46G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-46G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9335
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5496
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9334
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3148
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2227
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3167
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5602
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13095
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

2-240954324-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954324
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954324
    reference: chr 2
allele count: 2
allele frequency: 1.668446342765617e-5
allele num: 119872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3646C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-47C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-47C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-47C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-47C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-47C>T
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3155
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1545
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2281
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5553
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13093
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3993
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2001
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

2-240954325-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240954325
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240954325
    reference: chr 2
allele count: 2
allele frequency: 1.66730580055688e-5
allele num: 119954
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+3645C>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.548-48C>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.570-48C>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.548-48C>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*204-48C>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.668-48C>A
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10423
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2228
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3991
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2303
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3152
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1999
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10938
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

2-240957205-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957205
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957205
    reference: chr 2
allele count: 6
allele frequency: 3.660768761439902e-4
allele num: 16390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+765G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+765G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+765G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.667+27G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+765G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+765G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37087
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5463
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2793
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4288
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2168
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3619
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

2-240957213-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957213
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957213
    reference: chr 2
allele count: 1
allele frequency: 5.99880023995201e-5
allele num: 16670
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+757A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+757A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+757A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+757A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.667+19A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+757A>G
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36505
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33481
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2287
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1086
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3170
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1654
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/2-240957217-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957217
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957217
    reference: chr 2
allele count: 22
allele frequency: 1.305328112020885e-3
allele num: 16854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+753G>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+753G>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+753G>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.667+15G>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+753G>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+753G>T
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9913
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35547
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33043
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7944
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1977
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

2-240957234-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957234
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957234
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 17728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+736C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+736C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+736C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+736C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.665C>T
  hgvsp: ENSP00000302321.4:p.Pro222Leu
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+736C>T
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29983
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17020
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1093
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3562
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1370
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13856
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28313
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro222Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

2-240957234-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957234
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957234
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 17728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+736C>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+736C>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+736C>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.665C>A
  hgvsp: ENSP00000302321.4:p.Pro222Gln
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+736C>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+736C>A
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17020
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29983
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28313
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3562
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1370
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2323
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro222Gln
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

2-240957239-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957239
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957239
    reference: chr 2
allele count: 1
allele frequency: 5.524861878453039e-5
allele num: 18100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+731C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+731C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+731C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.660C>T
  hgvsp: ENST00000307300.4:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+731C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+731C>T
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27979
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26695
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser220Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

2-240957243-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957243
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957243
    reference: chr 2
allele count: 4564
allele frequency: 2.115117249049958e-1
allele num: 21578
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+727G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.656G>A
  hgvsp: ENSP00000302321.4:p.Arg219Gln
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+727G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+727G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+727G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+727G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 156
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 21625
  bin: 7.5e0
  variant carriers: 4390
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 196
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 146
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 2.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 1.25e1
  variant carriers: 1599
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 173
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.25e1
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 3.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.75e1
  variant carriers: 314
genotype depth: GenotypeDepth
  all individuals: 22789
  bin: 2.5e0
  variant carriers: 839
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.75e1
  variant carriers: 470
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 2.25e1
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 3.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 1.25e1
  variant carriers: 302
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 7.25e1
  variant carriers: 223
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 3.25e1
  variant carriers: 268
genotype quality: GenotypeQuality
  all individuals: 19848
  bin: 7.5e0
  variant carriers: 263
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 2.75e1
  variant carriers: 413
genotype quality: GenotypeQuality
  all individuals: 2059
  bin: 1.75e1
  variant carriers: 460
genotype quality: GenotypeQuality
  all individuals: 5102
  bin: 9.75e1
  variant carriers: 4416
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 6.25e1
  variant carriers: 438
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 8.25e1
  variant carriers: 205
genotype quality: GenotypeQuality
  all individuals: 13446
  bin: 2.25e1
  variant carriers: 484
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.75e1
  variant carriers: 112
hgvs: p.Arg219Gln
num of homozygotes: 335
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

2-240957244-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957244
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957244
    reference: chr 2
allele count: 2
allele frequency: 9.824147755182238e-5
allele num: 20358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.655C>T
  hgvsp: ENSP00000302321.4:p.Arg219Ter
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+726C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+726C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+726C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+726C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+726C>T
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22245
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 24137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22591
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17767
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1235
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Arg219Ter
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

2-240957262-T-TCAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957262
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957265
    reference: chr 2
allele count: 1
allele frequency: 4.644681839294008e-5
allele num: 21530
alternate allele: TCAA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+705_547+707dupTTG
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+705_*203+707dupTTG
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+705_547+707dupTTG
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.634_636dupTTG
  hgvsp: ENSP00000302321.4:p.Leu212dup
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+705_569+707dupTTG
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+705_547+707dupTTG
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19595
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24452
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4168
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu212dup
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/2-240957264-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957264
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957264
    reference: chr 2
allele count: 3
allele frequency: 1.382743362831858e-4
allele num: 21696
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+706T>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+706T>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+706T>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+706T>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.635T>G
  hgvsp: ENSP00000302321.4:p.Leu212Trp
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+706T>G
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27617
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19042
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18270
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4255
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu212Trp
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

2-240957293-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957293
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957293
    reference: chr 2
allele count: 1
allele frequency: 4.482696790389098e-5
allele num: 22308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.606G>A
  hgvsp: ENST00000307300.4:c.606G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+677G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+677G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+677G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+677G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+677G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19831
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19513
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu202Leu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

2-240957297-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957297
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957297
    reference: chr 2
allele count: 1
allele frequency: 4.483500717360115e-5
allele num: 22304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+673A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+673A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.602A>G
  hgvsp: ENSP00000302321.4:p.Lys201Arg
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+673A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+673A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+673A>G
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20548
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25707
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4185
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 23544
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys201Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

2-240957309-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957309
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957309
    reference: chr 2
allele count: 2
allele frequency: 9.321401938851603e-5
allele num: 21456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+661G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.590G>A
  hgvsp: ENSP00000302321.4:p.Gly197Glu
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+661G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+661G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+661G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+661G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21334
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24539
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
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genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 650
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 554
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1440
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly197Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

2-240957317-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957317
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957317
    reference: chr 2
allele count: 1
allele frequency: 4.680333239726669e-5
allele num: 21366
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+653G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.582G>A
  hgvsp: ENST00000307300.4:c.582G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+653G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+653G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+653G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+653G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 650
  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly194Gly
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP

2-240957319-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957319
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957319
    reference: chr 2
allele count: 10
allele frequency: 4.723665564478035e-4
allele num: 21170
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.580G>C
  hgvsp: ENSP00000302321.4:p.Gly194Arg
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+651G>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+651G>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+651G>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+651G>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+651G>C
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 26943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3832
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26623
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly194Arg
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

2-240957326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957326
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957326
    reference: chr 2
allele count: 1
allele frequency: 4.820206304829847e-5
allele num: 20746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+644G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.577-4G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+644G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+644G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+644G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+644G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29405
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14084
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29088
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3754
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
hgvs: c.577-4G>A
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

2-240957336-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957336
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957336
    reference: chr 2
allele count: 46
allele frequency: 2.332657200811359e-3
allele num: 19720
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+634A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+634A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+634A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+634A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.577-14A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+634A>G
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11940
  bin: 7.5e0
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 32696
  bin: 2.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 31584
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 8.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3538
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8686
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum

2-240957339-CGTCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957339
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957335
    reference: chr 2
allele count: 1
allele frequency: 5.192647211548447e-5
allele num: 19258
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+627_547+630delTGAC
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+627_547+630delTGAC
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+627_*203+630delTGAC
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+627_569+630delTGAC
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.577-21_577-18delTGAC
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+627_547+630delTGAC
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33571
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3465
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2623
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: CGTCA
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD

2-240957340-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957340
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957340
    reference: chr 2
allele count: 1
allele frequency: 5.212677231025855e-5
allele num: 19184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+630C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+630C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+630C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+630C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.577-18C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+630C>T
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10503
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33798
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2726
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3445
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32226
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP

2-240957358-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957358
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957358
    reference: chr 2
allele count: 5
allele frequency: 2.788933511825078e-4
allele num: 17928
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+612G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+612G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.577-36G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+612G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+612G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+612G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7822
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5866
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29388
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3098
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2658
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

2-240957359-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957359
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957359
    reference: chr 2
allele count: 1
allele frequency: 5.569789461958338e-5
allele num: 17954
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.577-37T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+611T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+611T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+611T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+611T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+611T>C
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7784
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34342
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2749
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5630
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2818
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3093
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1541
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

2-240957861-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957861
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957861
    reference: chr 2
allele count: 2
allele frequency: 2.108992745064957e-5
allele num: 94832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+80A>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+109A>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+109A>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.*50A>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+109A>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+109A>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+109A>T
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19141
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11869
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11692
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4651
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3072
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3005
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

2-240957864-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957864
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957864
    reference: chr 2
allele count: 1
allele frequency: 1.054362953903252e-5
allele num: 94844
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+106A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.*47A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+77A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+106A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+106A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+106A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+106A>G
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19155
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10833
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3051
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6976
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8231
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2647
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7899
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2211
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

2-240957873-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957873
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957873
    reference: chr 2
allele count: 29
allele frequency: 3.039258840051144e-4
allele num: 95418
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+97G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+97G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.*38G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+68G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+97G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+97G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+97G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11866
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11824
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18068
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7906
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11065
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11131
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

2-240957874-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957874
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957874
    reference: chr 2
allele count: 2
allele frequency: 2.087595507494468e-5
allele num: 95804
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+96T>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+96T>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+67T>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+96T>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+96T>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.*37T>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+96T>A
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17710
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11864
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6141
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2215
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11677
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4625
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD

2-240957877-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957877
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957877
    reference: chr 2
allele count: 6
allele frequency: 6.233507178922434e-5
allele num: 96254
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+93G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+93G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+93G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+93G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+64G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.*34G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+93G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5001
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7907
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4504
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5642
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11061
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1916
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

2-240957881-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957881
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957881
    reference: chr 2
allele count: 1
allele frequency: 1.028891266770928e-5
allele num: 97192
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+89G>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+89G>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+89G>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+60G>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.*30G>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+89G>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+89G>C
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17701
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14620
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11021
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4209
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6732
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4588
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

2-240957881-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957881
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957881
    reference: chr 2
allele count: 1
allele frequency: 1.028891266770928e-5
allele num: 97192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+89G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.*30G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+60G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+89G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+89G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+89G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+89G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14620
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4588
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11021
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7909
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6732
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

2-240957882-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957882
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957882
    reference: chr 2
allele count: 1
allele frequency: 1.023143506108167e-5
allele num: 97738
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+88T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+88T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.*29T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+88T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+88T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+88T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+59T>C
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14008
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11263
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10914
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6468
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1885
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

2-240957896-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957896
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957896
    reference: chr 2
allele count: 3
allele frequency: 2.841393419332841e-5
allele num: 105582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+74A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+45A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+74A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.*15A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+74A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+74A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+74A>G
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5097
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7749
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

2-240957901-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957901
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957901
    reference: chr 2
allele count: 1
allele frequency: 9.115105552922302e-6
allele num: 109708
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.*10C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+40C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+69C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+69C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+69C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+69C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+69C>T
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1862
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2787
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34424
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7921
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

2-240957904-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957904
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957904
    reference: chr 2
allele count: 1
allele frequency: 8.958165367732689e-6
allele num: 111630
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+66C>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+66C>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+66C>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+37C>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.*7C>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+66C>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+66C>G
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34836
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2984
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7924
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-240957905-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957905
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957905
    reference: chr 2
allele count: 1
allele frequency: 8.920765758532712e-6
allele num: 112098
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+36T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+65T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+65T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.*6T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+65T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+65T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+65T>C
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6950
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4738
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD

2-240957914-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957914
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957914
    reference: chr 2
allele count: 261
allele frequency: 2.244157452150436e-3
allele num: 116302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+56G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+27G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+56G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+56G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+56G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+56G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.603G>A
  hgvsp: ENST00000407129.3:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37264
  bin: 2.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 8268
  bin: 2.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 3.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3251
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2635
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu201Leu
num of homozygotes: 3
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

2-240957917-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957917
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957917
    reference: chr 2
allele count: 1
allele frequency: 8.509769215058888e-6
allele num: 117512
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+53G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+24G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+53G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+53G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.600G>A
  hgvsp: ENST00000407129.3:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+53G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+53G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly200Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

2-240957919-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957919
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957919
    reference: chr 2
allele count: 4
allele frequency: 3.384610177522804e-5
allele num: 118182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+51G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.598G>A
  hgvsp: ENSP00000383975.3:p.Gly200Arg
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+51G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+51G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+51G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+51G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+22G>A
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8982
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38236
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7965
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly200Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

2-240957922-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957922
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957922
    reference: chr 2
allele count: 1
allele frequency: 8.409297319116015e-6
allele num: 118916
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+48C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+48C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+48C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+19C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+48C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+48C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.595C>T
  hgvsp: ENSP00000383975.3:p.Gln199Ter
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42625
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln199Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

2-240957930-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957930
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957930
    reference: chr 2
allele count: 2
allele frequency: 1.663506005256679e-5
allele num: 120228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.587C>T
  hgvsp: ENSP00000383975.3:p.Ala196Val
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.576+11C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+40C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+40C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+40C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+40C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+40C>T
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3619
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44087
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala196Val
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-240957943-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957943
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957943
    reference: chr 2
allele count: 3
allele frequency: 2.481102271035612e-5
allele num: 120914
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.574T>C
  hgvsp: ENSP00000383975.3:p.Trp192Arg
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+27T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+27T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+27T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.574T>C
  hgvsp: ENSP00000302321.4:p.Trp192Arg
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+27T>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+27T>C
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39003
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1109
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Trp192Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS

2-240957944-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957944
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957944
    reference: chr 2
allele count: 5
allele frequency: 4.134486579456563e-5
allele num: 120934
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+26C>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+26C>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.573C>G
  hgvsp: ENSP00000383975.3:p.Phe191Leu
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+26C>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+26C>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.573C>G
  hgvsp: ENSP00000302321.4:p.Phe191Leu
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+26C>G
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38985
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44904
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7970
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3703
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Phe191Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

2-240957948-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957948
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957948
    reference: chr 2
allele count: 1
allele frequency: 8.260776182530111e-6
allele num: 121054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.569A>G
  hgvsp: ENSP00000302321.4:p.His190Arg
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+22A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+22A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+22A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+22A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+22A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.569A>G
  hgvsp: ENSP00000383975.3:p.His190Arg
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45018
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3720
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His190Arg
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

2-240957948-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957948
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957948
    reference: chr 2
allele count: 1
allele frequency: 8.260776182530111e-6
allele num: 121054
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+22A>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.569A>C
  hgvsp: ENSP00000383975.3:p.His190Pro
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.569A>C
  hgvsp: ENSP00000302321.4:p.His190Pro
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+22A>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+22A>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+22A>C
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+22A>C
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3720
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His190Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

2-240957951-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957951
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957951
    reference: chr 2
allele count: 7
allele frequency: 5.780346820809248e-5
allele num: 121100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+19C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+19C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.566C>T
  hgvsp: ENSP00000302321.4:p.Thr189Ile
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.566C>T
  hgvsp: ENSP00000383975.3:p.Thr189Ile
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+19C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+19C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+19C>T
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3719
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr189Ile
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

2-240957952-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957952
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957952
    reference: chr 2
allele count: 10
allele frequency: 8.256547442121602e-5
allele num: 121116
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*203+18A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.547+18A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.547+18A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.565A>G
  hgvsp: ENSP00000383975.3:p.Thr189Ala
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.569+18A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.547+18A>G
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.565A>G
  hgvsp: ENSP00000302321.4:p.Thr189Ala
  variant of: http://identifiers.org/hgnc/7684
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10664
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3723
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7970
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr189Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

2-240957971-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957971
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957971
    reference: chr 2
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.546G>A
  hgvsp: ENST00000443626.1:c.546G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.546G>A
  hgvsp: ENST00000252711.2:c.546G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.546G>A
  hgvsp: ENST00000307300.4:c.546G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*202G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.568G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.546G>A
  hgvsp: ENST00000404554.1:c.546G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.546G>A
  hgvsp: ENST00000407129.3:c.546G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3731
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45331
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 7.25e1
  variant carriers: 0
hgvs: c.546G>A
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

2-240957974-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957974
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957974
    reference: chr 2
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*199G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.543G>A
  hgvsp: ENST00000252711.2:c.543G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.565G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.543G>A
  hgvsp: ENST00000404554.1:c.543G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.543G>A
  hgvsp: ENST00000443626.1:c.543G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.543G>A
  hgvsp: ENST00000307300.4:c.543G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.543G>A
  hgvsp: ENST00000407129.3:c.543G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3736
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys181Lys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

2-240957978-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957978
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957978
    reference: chr 2
allele count: 4
allele frequency: 3.297663605335619e-5
allele num: 121298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.561G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.539G>A
  hgvsp: ENSP00000385697.1:p.Arg180Gln
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.539G>A
  hgvsp: ENSP00000252711.2:p.Arg180Gln
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*195G>A
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.539G>A
  hgvsp: ENSP00000411527.1:p.Arg180Gln
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.539G>A
  hgvsp: ENSP00000302321.4:p.Arg180Gln
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.539G>A
  hgvsp: ENSP00000383975.3:p.Arg180Gln
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45323
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3735
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg180Gln
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

2-240957979-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957979
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957979
    reference: chr 2
allele count: 3
allele frequency: 2.47320692497939e-5
allele num: 121300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000302321
  ensembl transcript: ENST00000307300
  gene symbol: NDUFA10
  hgvsc: ENST00000307300.4:c.538C>T
  hgvsp: ENSP00000302321.4:p.Arg180Ter
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000252711
  ensembl transcript: ENST00000252711
  gene symbol: NDUFA10
  hgvsc: ENST00000252711.2:c.538C>T
  hgvsp: ENSP00000252711.2:p.Arg180Ter
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130414
  ensembl transcript: ENST00000485344
  gene symbol: NDUFA10
  hgvsc: ENST00000485344.2:n.560C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000411527
  ensembl transcript: ENST00000443626
  gene symbol: NDUFA10
  hgvsc: ENST00000443626.1:c.538C>T
  hgvsp: ENSP00000411527.1:p.Arg180Ter
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000385697
  ensembl transcript: ENST00000404554
  gene symbol: NDUFA10
  hgvsc: ENST00000404554.1:c.538C>T
  hgvsp: ENSP00000385697.1:p.Arg180Ter
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000388413
  ensembl transcript: ENST00000414580
  gene symbol: NDUFA10
  hgvsc: ENST00000414580.1:c.*194C>T
  variant of: http://identifiers.org/hgnc/7684
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000130414
  ensembl protein: ENSP00000383975
  ensembl transcript: ENST00000407129
  gene symbol: NDUFA10
  hgvsc: ENST00000407129.3:c.538C>T
  hgvsp: ENSP00000383975.3:p.Arg180Ter
  variant of: http://identifiers.org/hgnc/7684
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3732
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg180Ter
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

2-240957981-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 240957981
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 240957981
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: G
canonical: true
consequence: missense
filter: PASS
hgvs: p.Ile179Thr
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 3469
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13410
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 2350
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8261
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 1.450676982591876e-3
allele num: 10340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.48e-1

DP
type: SiteQuality
SIO_000300: 2.209121e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.186e0

QD
type: SiteQuality
SIO_000300: 1.505e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.22e-1

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13400
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3288
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1562
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4783
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.006186371963122e-5
allele num: 66598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.579e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.66e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 2.207945e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.16e-1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1562
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8259
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.504639778972342e-5
allele num: 66598
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

FS
type: SiteQuality
SIO_000300: 4.407e0

DP
type: SiteQuality
SIO_000300: 2.20773e6

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: 8.37e-1

QD
type: SiteQuality
SIO_000300: 1.411e1

GenotypeQuality
all individuals: 8260
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3467
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13391
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2350
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1561
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.671179883945841e-5
allele num: 10340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50159168718842e-5
allele num: 66596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.978e1

VQSLOD
type: SiteQuality
SIO_000300: 3.07e0

QD
type: SiteQuality
SIO_000300: 1.366e1

MQRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.081e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

FS
type: SiteQuality
SIO_000300: 5.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

DP
type: SiteQuality
SIO_000300: 2.207453e6

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23139
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1561
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3467
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.051114181031894e-4
allele num: 66596
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.081e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

DP
type: SiteQuality
SIO_000300: 2.207453e6

QD
type: SiteQuality
SIO_000300: 1.366e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.07e0

GenotypeQuality
all individuals: 209
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2351
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GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50177209106746e-5
allele num: 66588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.206546e6

FS
type: SiteQuality
SIO_000300: 1.2613e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.013e0

VQSLOD
type: SiteQuality
SIO_000300: -1.467e0

MQRankSum
type: SiteQuality
SIO_000300: 3.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.544e1

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13382
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4777
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variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8250
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variant carriers: 0

GenotypeQuality
all individuals: 3465
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501907422426482e-5
allele num: 66582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.82e-1

QD
type: SiteQuality
SIO_000300: 1.374e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.62e-1

DP
type: SiteQuality
SIO_000300: 2.206013e6

VQSLOD
type: SiteQuality
SIO_000300: 4.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8250
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501862309263487e-5
allele num: 66584
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.71e-1

QD
type: SiteQuality
SIO_000300: 1.299e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 7.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.56e-1

DP
type: SiteQuality
SIO_000300: 2.205906e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 8232
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13366
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23078
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.682416731216112e-5
allele num: 10328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66552
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

QD
type: SiteQuality
SIO_000300: 2.237e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.31e-1

FS
type: SiteQuality
SIO_000300: 4.882e0

DP
type: SiteQuality
SIO_000300: 2.203872e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -9.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.8e-2

MQ
type: SiteQuality
SIO_000300: 5.744e1

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 91
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variant carriers: 0

GenotypeQuality
all individuals: 23069
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13365
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.005349522149426e-5
allele num: 66548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.57e-1

QD
type: SiteQuality
SIO_000300: 1.31e1

MQ
type: SiteQuality
SIO_000300: 5.984e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.153e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.572e0

DP
type: SiteQuality
SIO_000300: 2.203415e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.419999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 145
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8133
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.517911353976928e-4
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

East Asian
type: Population
allele count: 13
allele frequency: 1.506373117033604e-3
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.512363877023043e-5
allele num: 66484
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.197787e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

MQRankSum
type: SiteQuality
SIO_000300: -1.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

QD
type: SiteQuality
SIO_000300: 1.448e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 1.667e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.08e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1528
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.676036786395974e-5
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66448
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.97e-1

FS
type: SiteQuality
SIO_000300: 7.451e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.009e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

DP
type: SiteQuality
SIO_000300: 2.193055e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.58e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.37e-1

QD
type: SiteQuality
SIO_000300: 1.325e1

GenotypeQuality
all individuals: 3208
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 208
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 4670
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-2

MQ
type: SiteQuality
SIO_000300: 5.844e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.245e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.191089e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.375e0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4649
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 63
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variant carriers: 0

GenotypeQuality
all individuals: 3403
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 152
allele frequency: 2.288260620841237e-3
allele num: 66426
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 7.886435331230284e-4
allele num: 16484
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.796116504854369e-4
allele num: 10300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 22
allele frequency: 1.908065915004336e-3
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.311258278145695e-3
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

FS
type: SiteQuality
SIO_000300: 6.860000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.462e1

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-2

DP
type: SiteQuality
SIO_000300: 2.190256e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7943
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1523
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3401
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.205509176938609e-4
allele num: 66362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.174837e6

MQ
type: SiteQuality
SIO_000300: 5.946e1

MQRankSum
type: SiteQuality
SIO_000300: -3.45e-1

FS
type: SiteQuality
SIO_000300: 1.543e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

QD
type: SiteQuality
SIO_000300: 1.371e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.69e-1

GenotypeQuality
all individuals: 1010
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4530
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3353
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21360
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.74089226573154e-5
allele num: 10266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66290
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.041e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 2.157399e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.364e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.17e-1

GenotypeQuality
all individuals: 531
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4530
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13184
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 7746
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3353
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21360
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.736714136853074e-4
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.215066828675577e-4
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508523155830442e-5
allele num: 66290
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.17e-1

DP
type: SiteQuality
SIO_000300: 2.157399e6

FS
type: SiteQuality
SIO_000300: 5.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.041e-1

QD
type: SiteQuality
SIO_000300: 1.364e1

GenotypeQuality
all individuals: 2264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3325
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3049
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13253
bin: 9.75e1
variant carriers: 164

GenotypeQuality
all individuals: 21192
bin: 6.25e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.018139015483053e-5
allele num: 66266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.215509906405737e-4
allele num: 16454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 154
allele frequency: 1.501852935439828e-2
allele num: 10254
num of homozygotes: 3

Latino
type: Population
allele count: 10
allele frequency: 8.691117677733357e-4
allele num: 11506
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.66e-1

MQ
type: SiteQuality
SIO_000300: 5.992e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.894e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

FS
type: SiteQuality
SIO_000300: 2.525e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.74e-2

DP
type: SiteQuality
SIO_000300: 2.1544e6

QD
type: SiteQuality
SIO_000300: 1.3e1

GenotypeQuality
all individuals: 634
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3029
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4461
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21082
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.035913686434284e-5
allele num: 66270
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.492e0

MQRankSum
type: SiteQuality
SIO_000300: 4.26e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 2.837e0

DP
type: SiteQuality
SIO_000300: 2.144588e6

QD
type: SiteQuality
SIO_000300: 1.365e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

GenotypeQuality
all individuals: 19674
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1405
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2884
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13126
bin: 9.75e1
variant carriers: 43

GenotypeQuality
all individuals: 7237
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1472
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.529051987767584e-4
allele num: 6540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 35
allele frequency: 2.128435903673072e-3
allele num: 16444
num of homozygotes: 2

African
type: Population
allele count: 1
allele frequency: 9.75800156128025e-5
allele num: 10248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.208787887945363e-4
allele num: 66182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.458e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.77e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: 3.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.54e0

FS
type: SiteQuality
SIO_000300: 2.532e0

DP
type: SiteQuality
SIO_000300: 2.117745e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6858
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4217
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18551
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2823
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2242
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66156
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.908540160250146e-4
allele num: 10234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.948e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.099122e6

MQRankSum
type: SiteQuality
SIO_000300: -1.04e-1

QD
type: SiteQuality
SIO_000300: 1.241e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3427
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1443
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12081
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2579
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4028
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1946
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65974
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.828153564899452e-4
allele num: 16410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168224299065421e-4
allele num: 8560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

DP
type: SiteQuality
SIO_000300: 2.031206e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-1

FS
type: SiteQuality
SIO_000300: 7.748e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.12e-1

QD
type: SiteQuality
SIO_000300: 1.292e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

GenotypeQuality
all individuals: 68
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2227
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3635
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3169
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11376
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1443
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2553
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.727526618956188e-5
allele num: 11458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517773123273533e-5
allele num: 65886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 2.026194e6

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

FS
type: SiteQuality
SIO_000300: 2.164e0

QD
type: SiteQuality
SIO_000300: 1.027e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

GenotypeQuality
all individuals: 1535
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3773
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1446
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13095
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3188
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2800
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5552
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.032876379958753e-5
allele num: 65944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.38e-1

FS
type: SiteQuality
SIO_000300: 3.621e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.419999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.022487e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.72e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

QD
type: SiteQuality
SIO_000300: 1.754e1

GenotypeQuality
all individuals: 1073
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 591
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31707
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 528
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 6.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 7.058823529411765e-3
allele num: 850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5386
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.573e0

MQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.594e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.75e-2

QD
type: SiteQuality
SIO_000300: 1.348e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.2e-1

DP
type: SiteQuality
SIO_000300: 3.57185e5

GenotypeQuality
all individuals: 6585
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5550
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.310615989515072e-4
allele num: 7630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.134e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.22e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.246e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.83949e5

MQRankSum
type: SiteQuality
SIO_000300: -1.122e0

GenotypeQuality
all individuals: 1177
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 416
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 9.75e1
variant carriers: 22

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

South Asian
type: Population
allele count: 21
allele frequency: 2.750130958617077e-3
allele num: 7636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.766160367361356e-4
allele num: 5662
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.293e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.94e-2

QD
type: SiteQuality
SIO_000300: 1.299e1

DP
type: SiteQuality
SIO_000300: 3.95506e5

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.82e0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2323
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7656
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.167e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.972e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.55e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

DP
type: SiteQuality
SIO_000300: 4.42683e5

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13856
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1093
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 976
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7656
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.972e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.55e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 4.42683e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 2.167e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

GenotypeQuality
all individuals: 1142
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3719
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16510
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7668
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.525252525252525e-3
allele num: 396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.154e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.941e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 4.58882e5

VQSLOD
type: SiteQuality
SIO_000300: -2.413e0

FS
type: SiteQuality
SIO_000300: 2.474e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.32e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4657
bin: 2.5e0
variant carriers: 10

GenotypeQuality
all individuals: 563
bin: 7.75e1
variant carriers: 142

GenotypeQuality
all individuals: 583
bin: 9.25e1
variant carriers: 429

GenotypeQuality
all individuals: 143
bin: 3.75e1
variant carriers: 52

GenotypeQuality
all individuals: 457
bin: 8.75e1
variant carriers: 320

GenotypeQuality
all individuals: 369
bin: 5.75e1
variant carriers: 355

GenotypeQuality
all individuals: 1169
bin: 6.75e1
variant carriers: 365

GenotypeQuality
all individuals: 233
bin: 5.25e1
variant carriers: 192

Other
type: Population
allele count: 35
allele frequency: 1.483050847457627e-1
allele num: 236
num of homozygotes: 2

East Asian
type: Population
allele count: 151
allele frequency: 1.981627296587926e-1
allele num: 762
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 301
allele frequency: 1.61480686695279e-1
allele num: 1864
num of homozygotes: 15

South Asian
type: Population
allele count: 1328
allele frequency: 1.700384122919334e-1
allele num: 7810
num of homozygotes: 108

African
type: Population
allele count: 73
allele frequency: 6.624319419237749e-2
allele num: 1102
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 2430
allele frequency: 2.687458526874585e-1
allele num: 9042
num of homozygotes: 191

Latino
type: Population
allele count: 246
allele frequency: 3.228346456692913e-1
allele num: 762
num of homozygotes: 13

VQSLOD
type: SiteQuality
SIO_000300: 6.53e0

QD
type: SiteQuality
SIO_000300: 1.551e1

DP
type: SiteQuality
SIO_000300: 5.91034e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.63e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

GenotypeQuality
all individuals: 3634
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1093
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3706
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.45398773006135e-4
allele num: 8150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.48e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 4.98374e5

MQRankSum
type: SiteQuality
SIO_000300: 6.67e-1

QD
type: SiteQuality
SIO_000300: 1.432e1

FS
type: SiteQuality
SIO_000300: 1.197e0

VQSLOD
type: SiteQuality
SIO_000300: -7.244e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

GenotypeQuality
all individuals: 1368
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18727
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2424
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1156
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8850
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.285016705217168e-4
allele num: 7782
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.77e-1

QD
type: SiteQuality
SIO_000300: 1.6e1

FS
type: SiteQuality
SIO_000300: 6.419e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.59e-1

MQ
type: SiteQuality
SIO_000300: 5.746e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.86e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.064e0

DP
type: SiteQuality
SIO_000300: 5.36816e5

GenotypeQuality
all individuals: 1163
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1244
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25466
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.115324559446799e-4
allele num: 8966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.659574468085106e-3
allele num: 752
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e0

QD
type: SiteQuality
SIO_000300: 1.108e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

FS
type: SiteQuality
SIO_000300: 9.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.77e-2

DP
type: SiteQuality
SIO_000300: 5.41545e5

VQSLOD
type: SiteQuality
SIO_000300: 9.4e-2

GenotypeQuality
all individuals: 24117
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 7.462686567164179e-4
allele num: 1340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1914
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e0

FS
type: SiteQuality
SIO_000300: 2.447e0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.57e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

VQSLOD
type: SiteQuality
SIO_000300: -1.275e0

DP
type: SiteQuality
SIO_000300: 5.42321e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.06e-2

GenotypeQuality
all individuals: 2171
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 391
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.073191672032625e-4
allele num: 9318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1910
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.14e-2

DP
type: SiteQuality
SIO_000300: 5.37956e5

QD
type: SiteQuality
SIO_000300: 1.132e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.945e0

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 5.875e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

GenotypeQuality
all individuals: 206
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3825
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3182
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1177
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 2.824858757062147e-3
allele num: 708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1862
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

DP
type: SiteQuality
SIO_000300: 5.10798e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.183e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

QD
type: SiteQuality
SIO_000300: 5.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.94e-2

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1178
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3864
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1232
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1880
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.150218541522889e-4
allele num: 8694
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.94e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.26e-2

QD
type: SiteQuality
SIO_000300: 1.069e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.75e-1

FS
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.35e-1

DP
type: SiteQuality
SIO_000300: 5.0156e5

GenotypeQuality
all individuals: 1238
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1727
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.453488372093023e-3
allele num: 688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1848
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 1.161290322580645e-3
allele num: 7750
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.198e1

FS
type: SiteQuality
SIO_000300: 1.202e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.308e0

DP
type: SiteQuality
SIO_000300: 4.97133e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.41e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.570000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

GenotypeQuality
all individuals: 1293
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7734
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.547987616099071e-3
allele num: 646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1820
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 4.79855e5

VQSLOD
type: SiteQuality
SIO_000300: -2.363e0

FS
type: SiteQuality
SIO_000300: 2.632e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

MQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.89e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 5.21e0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 546
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1263
bin: 9.75e1
variant carriers: 41

GenotypeQuality
all individuals: 657
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1465
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 8

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 1

African
type: Population
allele count: 44
allele frequency: 3.672787979966611e-2
allele num: 1198
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.923076923076923e-3
allele num: 520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.311647429171039e-4
allele num: 7624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 236
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.45e-2

FS
type: SiteQuality
SIO_000300: 5.81e-1

DP
type: SiteQuality
SIO_000300: 4.48589e5

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.192e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7309
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1229
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 213
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.297690111601349e-4
allele num: 7706
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7352
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.94e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.733e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 5.469e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.3861e5

QD
type: SiteQuality
SIO_000300: 2.807e1

GenotypeQuality
all individuals: 1159
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2054
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7038
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1228
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1138
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.369112814895947e-4
allele num: 7304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1764
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.197e1

VQSLOD
type: SiteQuality
SIO_000300: -3.832e-1

FS
type: SiteQuality
SIO_000300: 6.562e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.000000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.36147e5

GenotypeQuality
all individuals: 248
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2775
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 277
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 6.524008350730689e-4
allele num: 7664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 3.043e0

MQRankSum
type: SiteQuality
SIO_000300: -1.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.358e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.171e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-2

DP
type: SiteQuality
SIO_000300: 3.98891e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.74e-2

QD
type: SiteQuality
SIO_000300: 1.217e1

GenotypeQuality
all individuals: 247
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29642
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 483
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554243083618278e-4
allele num: 6434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.065e0

FS
type: SiteQuality
SIO_000300: 3.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

DP
type: SiteQuality
SIO_000300: 3.98723e5

MQRankSum
type: SiteQuality
SIO_000300: 2.85e0

QD
type: SiteQuality
SIO_000300: 1.277e1

GenotypeQuality
all individuals: 3764
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7901
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4785
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1399
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3148
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8688
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.8972680151214e-5
allele num: 51318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5826
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.68e0

MQRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

QD
type: SiteQuality
SIO_000300: 8.890000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 6.5e-2

DP
type: SiteQuality
SIO_000300: 1.270121e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

GenotypeQuality
all individuals: 515
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
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variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.948330280949227e-5
allele num: 51326
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5830
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.96e-1

DP
type: SiteQuality
SIO_000300: 1.274581e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.924e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

GenotypeQuality
all individuals: 2453
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6308
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4632
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.5e0
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GenotypeQuality
all individuals: 594
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7927
bin: 9.75e1
variant carriers: 28

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 386
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5822
num of homozygotes: 0

East Asian
type: Population
allele count: 29
allele frequency: 4.504504504504504e-3
allele num: 6438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

QD
type: SiteQuality
SIO_000300: 1.292e1

DP
type: SiteQuality
SIO_000300: 1.317037e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.12e0

GenotypeQuality
all individuals: 264
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 124
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11062
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2290
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7811
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 387
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variant carriers: 0

GenotypeQuality
all individuals: 7903
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.853267570900123e-5
allele num: 51904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8752
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 7.052e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.323734e6

QD
type: SiteQuality
SIO_000300: 1.536e1

GenotypeQuality
all individuals: 7490
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
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variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
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variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13074
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variant carriers: 0

GenotypeQuality
all individuals: 1908
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variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.150394968939336e-4
allele num: 52156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13946
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5854
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.921e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

QD
type: SiteQuality
SIO_000300: 1.513e1

FS
type: SiteQuality
SIO_000300: 4.462e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.49e-1

DP
type: SiteQuality
SIO_000300: 1.343917e6

GenotypeQuality
all individuals: 1354
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16904
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
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variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
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variant carriers: 0

GenotypeQuality
all individuals: 7909
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 621
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.899263085922662e-5
allele num: 52652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.614e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

MQRankSum
type: SiteQuality
SIO_000300: -6.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

DP
type: SiteQuality
SIO_000300: 1.378329e6

GenotypeQuality
all individuals: 385
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4209
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16904
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52652
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.127583749109053e-5
allele num: 14030
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6640
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.378329e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: -6.51e-1

QD
type: SiteQuality
SIO_000300: 1.614e1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4089
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1337
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17986
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7911
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5918
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6680
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.884729918202722e-5
allele num: 53058
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14030
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 3.854e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

DP
type: SiteQuality
SIO_000300: 1.388438e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.66e-2

QD
type: SiteQuality
SIO_000300: 7.85e0

GenotypeQuality
all individuals: 523
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7920
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2883
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30021
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2243
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1582
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2485
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14568
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.165892781764457e-4
allele num: 9476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57682
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.540767e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.448e0

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

QD
type: SiteQuality
SIO_000300: 1.412e1

VQSLOD
type: SiteQuality
SIO_000300: 9.7e-1

GenotypeQuality
all individuals: 428
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5844
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.696129637069774e-5
allele num: 14934
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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QD
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ReadPosRankSum
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BaseQRankSum
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MQ
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DP
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ClippingRankSum
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MQRankSum
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.929e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9814
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 15114
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Latino
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allele frequency: 9.650646593321752e-5
allele num: 10362
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East Asian
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allele frequency: 0.0e0
allele num: 7960
num of homozygotes: 0

DP
type: SiteQuality
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MQ
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.01e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 10440
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.626862757857747e-5
allele num: 61468
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East Asian
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allele frequency: 0.0e0
allele num: 7984
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Other
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ReadPosRankSum
type: SiteQuality
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FS
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DP
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

VQSLOD
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.38e-1

QD
type: SiteQuality
SIO_000300: 7.94e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6496
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Latino
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allele frequency: 9.074410163339383e-4
allele num: 11020
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 2.446513470681458e-2
allele num: 10096
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South Asian
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allele frequency: 6.411900487304436e-5
allele num: 15596
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European (Non-Finnish)
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allele frequency: 4.693219861706454e-5
allele num: 63922
num of homozygotes: 0

Other
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num of homozygotes: 0

QD
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: 8.999999999999999e-3

VQSLOD
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.605e0

MQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

DP
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SIO_000300: 1.69325e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 870
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South Asian
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allele count: 1
allele frequency: 6.356470887363335e-5
allele num: 15732
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8406
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11148
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

MQ
type: SiteQuality
SIO_000300: 5.992e1

VQSLOD
type: SiteQuality
SIO_000300: 3.63e-1

BaseQRankSum
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SIO_000300: -7.59e0

QD
type: SiteQuality
SIO_000300: 1.093e1

FS
type: SiteQuality
SIO_000300: 5.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -8.45e-1

DP
type: SiteQuality
SIO_000300: 1.707406e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.77e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 4
allele frequency: 2.525571410531633e-4
allele num: 15838
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6544
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65030
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Latino
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African
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allele frequency: 0.0e0
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East Asian
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Other
type: Population
allele count: 0
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allele num: 878
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
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QD
type: SiteQuality
SIO_000300: 1.263e1

VQSLOD
type: SiteQuality
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 15928
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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African
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allele frequency: 9.761811792268645e-5
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65468
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

InbreedingCoeff
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ClippingRankSum
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DP
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MQRankSum
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BaseQRankSum
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FS
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VQSLOD
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MQ
type: SiteQuality
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.022061045633122e-5
allele num: 66180
num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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MQRankSum
type: SiteQuality
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QD
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InbreedingCoeff
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DP
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VQSLOD
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ClippingRankSum
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FS
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MQ
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66534
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South Asian
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Other
type: Population
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allele num: 900
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African
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele num: 6606
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East Asian
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allele frequency: 3.474635163307853e-4
allele num: 8634
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BaseQRankSum
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DP
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QD
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MQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 2.892960462873674e-4
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.005620510354363e-5
allele num: 66542
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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Other
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allele num: 900
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East Asian
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501726986033939e-5
allele num: 66590
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-2

MQRankSum
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VQSLOD
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SIO_000300: -2.608e0

FS
type: SiteQuality
SIO_000300: 1.9605e1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.544e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.758103e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501726986033939e-5
allele num: 66590
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.27e0

MQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.9605e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.544e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.27e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 7
allele frequency: 4.265171825493541e-4
allele num: 16412
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.888e0

VQSLOD
type: SiteQuality
SIO_000300: 8.01e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.66e-1

DP
type: SiteQuality
SIO_000300: 1.759875e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

QD
type: SiteQuality
SIO_000300: 1.218e1

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 8
allele frequency: 4.872700694359849e-4
allele num: 16418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.161e0

DP
type: SiteQuality
SIO_000300: 1.759815e6

VQSLOD
type: SiteQuality
SIO_000300: 8.84e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.395e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7965
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1105
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.97e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.01e0

DP
type: SiteQuality
SIO_000300: 1.762126e6

GenotypeQuality
all individuals: 73
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 7964
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.28e0

VQSLOD
type: SiteQuality
SIO_000300: 7.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.0e-3

QD
type: SiteQuality
SIO_000300: 1.266e1

FS
type: SiteQuality
SIO_000300: 4.19e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.762426e6

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1110
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GenotypeQuality
all individuals: 666
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 2.426595486532395e-4
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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BaseQRankSum
type: SiteQuality
SIO_000300: -9.03e-1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

VQSLOD
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DP
type: SiteQuality
SIO_000300: 1.762849e6

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.762939e6

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0