1-45097840-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097840
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097840
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 16706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-175G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-175G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.201G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.14G>A
  hgvsp: ENSP00000388533.2:p.Arg5Gln
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-175G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-175G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.14G>A
  hgvsp: ENSP00000475383.1:p.Arg5Gln
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.14G>A
  hgvsp: ENSP00000335580.7:p.Arg5Gln
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-175G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.194G>A
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24553
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21131
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg5Gln
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-45097844-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097844
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097844
    reference: chr 1
allele count: 1
allele frequency: 5.665080444142307e-5
allele num: 17652
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-171C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-171C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.18C>A
  hgvsp: ENSP00000388533.2:p.Ser6Arg
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-171C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.198C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-171C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.18C>A
  hgvsp: ENSP00000475383.1:p.Ser6Arg
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.18C>A
  hgvsp: ENSP00000335580.7:p.Ser6Arg
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-171C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.205C>A
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22087
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21239
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser6Arg
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD

1-45097844-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097844
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097844
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 17652
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.18C>T
  hgvsp: ENST00000335497.7:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.18C>T
  hgvsp: ENST00000488865.2:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.205C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.198C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-171C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-171C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-171C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-171C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-171C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.18C>T
  hgvsp: ENST00000440132.2:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26325
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22087
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4723
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser6Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

1-45097849-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097849
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097849
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 20566
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.23G>A
  hgvsp: ENSP00000388533.2:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-166G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-166G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.203G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-166G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-166G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.23G>A
  hgvsp: ENSP00000475383.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-166G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.23G>A
  hgvsp: ENSP00000335580.7:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.210G>A
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17663
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30113
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg8Gln
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

1-45097850-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097850
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097850
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 21132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.211G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-165G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.24G>C
  hgvsp: ENST00000335497.7:c.24G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.24G>C
  hgvsp: ENST00000440132.2:c.24G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-165G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.204G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-165G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.24G>C
  hgvsp: ENST00000488865.2:c.24G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-165G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-165G>C
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30564
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg8Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP

1-45097851-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097851
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097851
    reference: chr 1
allele count: 1
allele frequency: 4.65419342827888e-5
allele num: 21486
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.205A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.25A>G
  hgvsp: ENSP00000335580.7:p.Arg9Gly
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.25A>G
  hgvsp: ENSP00000475383.1:p.Arg9Gly
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.212A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.25A>G
  hgvsp: ENSP00000388533.2:p.Arg9Gly
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-164A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-164A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-164A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-164A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-164A>G
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16420
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28688
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1662
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg9Gly
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

1-45097863-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097863
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097863
    reference: chr 1
allele count: 1
allele frequency: 3.547860640034059e-5
allele num: 28186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-152G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.37G>A
  hgvsp: ENSP00000475383.1:p.Ala13Thr
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-152G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.37G>A
  hgvsp: ENSP00000388533.2:p.Ala13Thr
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.224G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.217G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-152G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.37G>A
  hgvsp: ENSP00000335580.7:p.Ala13Thr
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-152G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-152G>A
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5255
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33440
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5749
  bin: 6.25e1
  variant carriers: 1
hgvs: p.Ala13Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

1-45097868-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097868
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097868
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 32966
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.222C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-147C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-147C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.42C>T
  hgvsp: ENST00000335497.7:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.42C>T
  hgvsp: ENST00000440132.2:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.229C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.42C>T
  hgvsp: ENST00000488865.2:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-147C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-147C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-147C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33175
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8692
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly14Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

1-45097870-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097870
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097870
    reference: chr 1
allele count: 1
allele frequency: 2.639218791237794e-5
allele num: 37890
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.224G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-145G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-145G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.44G>A
  hgvsp: ENSP00000388533.2:p.Gly15Glu
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.231G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.44G>A
  hgvsp: ENSP00000475383.1:p.Gly15Glu
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-145G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-145G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.44G>A
  hgvsp: ENSP00000335580.7:p.Gly15Glu
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-145G>A
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33150
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7056
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2039
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2083
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly15Glu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS

1-45097895-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097895
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097895
    reference: chr 1
allele count: 1
allele frequency: 1.126100763496318e-5
allele num: 88802
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+11G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-120G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+11G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-120G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-120G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-120G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+11G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-120G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+15G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+15G>T
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14884
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

1-45097899-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097899
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097899
    reference: chr 1
allele count: 2
allele frequency: 2.096655833944858e-5
allele num: 95390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-116T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+15T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+15T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+19T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+15T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-116T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-116T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-116T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+19T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-116T>C
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-45097900-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097900
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097900
    reference: chr 1
allele count: 1
allele frequency: 1.033869567015425e-5
allele num: 96724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-115G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+20G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-115G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+20G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-115G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+16G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-115G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+16G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-115G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+16G>C
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34936
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

1-45097903-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097903
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097903
    reference: chr 1
allele count: 1
allele frequency: 1.002385677913434e-5
allele num: 99762
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-112T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-112T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-112T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+23T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-112T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+19T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+19T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+19T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+23T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-112T>C
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36382
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10021
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10249
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum

1-45097903-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097903
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097902
    reference: chr 1
allele count: 1
allele frequency: 1.002385677913434e-5
allele num: 99762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+23delG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+23delG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-108delG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+27delG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+23delG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-108delG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-108delG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-108delG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-108delG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+27delG
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10021
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10249
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: TG
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum

1-45097923-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097923
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097923
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 112764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-92C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-92C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-92C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+43C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+39C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+39C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.17C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+43C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-92C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-92C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+39C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2852
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

1-45097924-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097924
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097924
    reference: chr 1
allele count: 1
allele frequency: 8.816320773015006e-6
allele num: 113426
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.18G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-91G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-91G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-91G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+44G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-91G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+40G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-91G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+44G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+40G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+40G>T
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4515
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

1-45097926-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097926
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097926
    reference: chr 1
allele count: 1
allele frequency: 8.760863470703673e-6
allele num: 114144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+42G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-89G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-89G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-89G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+46G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+42G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+46G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-89G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-89G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.20G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+42G>A
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

1-45097927-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097927
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097927
    reference: chr 1
allele count: 2
allele frequency: 1.74797671695013e-5
allele num: 114418
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+43G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+47G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+43G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.1G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-88G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-88G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-88G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-88G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.21G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+47G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-88G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+43G>T
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9759
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP

1-45097929-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097929
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097929
    reference: chr 1
allele count: 1
allele frequency: 8.720676724513823e-6
allele num: 114670
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-86T>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+45T>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-86T>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+45T>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.23T>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+49T>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-86T>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-86T>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.3T>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+45T>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-86T>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+49T>G
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3006
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9929
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

1-45097929-T-TCCGGTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097929
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097935
    reference: chr 1
allele count: 6
allele frequency: 5.232406034708293e-5
allele num: 114670
alternate allele: TCCGGTG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-84_907-79dupCGGTGC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.5_10dupCGGTGC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-84_74-79dupCGGTGC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+47_58+52dupCGGTGC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+47_238+52dupCGGTGC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+51_54+56dupCGGTGC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.25_30dupCGGTGC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+51_54+56dupCGGTGC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-84_907-79dupCGGTGC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-84_190-79dupCGGTGC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+47_245+52dupCGGTGC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-84_907-79dupCGGTGC
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3006
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9929
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4783
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

1-45097931-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097931
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097931
    reference: chr 1
allele count: 1440
allele frequency: 1.246213760276936e-2
allele num: 115550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-84C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.5C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+47C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+51C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.25C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-84C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+51C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+47C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-84C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-84C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-84C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+47C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 5019
  bin: 3.25e1
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38737
  bin: 2.25e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 195
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 7.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 3.75e1
  variant carriers: 206
genotype depth: GenotypeDepth
  all individuals: 10091
  bin: 2.75e1
  variant carriers: 173
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.75e1
  variant carriers: 153
genotype quality: GenotypeQuality
num of homozygotes: 14
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-45097932-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097932
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097932
    reference: chr 1
allele count: 1
allele frequency: 8.61163259330704e-6
allele num: 116122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-83G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-83G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+52G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+52G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+48G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.6G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+48G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-83G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-83G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.26G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-83G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+48G>A
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5119
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

1-45097934-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097934
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097934
    reference: chr 1
allele count: 1
allele frequency: 8.587966541282354e-6
allele num: 116442
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.58+50T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.54+54T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.28T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-81T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-81T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-81T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.54+54T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.8T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-81T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-81T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.245+50T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.238+50T>C
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

1-45097967-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097967
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097967
    reference: chr 1
allele count: 1
allele frequency: 8.294349888855711e-6
allele num: 120564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-48C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-48C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-48C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-48C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-48C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.41C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.61C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-48C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-48C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-48C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-48C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-48C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

1-45097972-GCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097972
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097970
    reference: chr 1
allele count: 1
allele frequency: 8.295450774795103e-6
allele num: 120548
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.51_52delCT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-38_55-37delCT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-38_246-37delCT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-38_239-37delCT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-38_907-37delCT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-38_74-37delCT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-38_907-37delCT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.71_72delCT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-38_55-37delCT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-38_190-37delCT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-38_907-37delCT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-38_59-37delCT
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: GCT
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

1-45097975-C-CTCTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097975
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097980
    reference: chr 1
allele count: 7
allele frequency: 5.806430206708915e-5
allele num: 120556
alternate allele: CTCTTT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-30_59-26dupTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.59_63dupTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-30_907-26dupTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.79_83dupTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-30_74-26dupTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-30_239-26dupTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-30_907-26dupTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-30_55-26dupTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-30_190-26dupTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-30_55-26dupTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-30_246-26dupTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-30_907-26dupTTCTT
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3877
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17347
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-45097975-C-CTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097975
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097978
    reference: chr 1
allele count: 1
allele frequency: 8.294900295298451e-6
allele num: 120556
alternate allele: CTTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.70_71insTTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-39_74-38insTTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-39_190-38insTTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-39_55-38insTTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-39_907-38insTTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.50_51insTTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-39_239-38insTTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-39_907-38insTTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-39_55-38insTTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-39_59-38insTTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-39_246-38insTTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-39_907-38insTTT
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD

1-45097975-CTCTTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097975
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097970
    reference: chr 1
allele count: 2
allele frequency: 1.65898005905969e-5
allele num: 120556
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-30_246-26delTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.79_83delTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.59_63delTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-30_907-26delTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-30_59-26delTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-30_55-26delTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-30_239-26delTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-30_74-26delTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-30_907-26delTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-30_190-26delTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-30_55-26delTTCTT
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-30_907-26delTTCTT
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: CTCTTT
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD

1-45097977-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097977
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097977
    reference: chr 1
allele count: 1
allele frequency: 8.29462508294625e-6
allele num: 120560
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-38C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-38C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-38C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-38C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-38C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-38C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.71C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-38C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-38C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.51C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-38C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-38C>G
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16904
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

1-45097982-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097982
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097982
    reference: chr 1
allele count: 2
allele frequency: 1.658952537367906e-5
allele num: 120558
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-33C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.56C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-33C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-33C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-33C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.76C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-33C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-33C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-33C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-33C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-33C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-33C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-45097985-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097985
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097985
    reference: chr 1
allele count: 18
allele frequency: 1.493032514930325e-4
allele num: 120560
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-30T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-30T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-30T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-30T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-30T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-30T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.79T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-30T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.59T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-30T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-30T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-30T>C
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-45097987-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097987
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097987
    reference: chr 1
allele count: 1
allele frequency: 8.295037908323241e-6
allele num: 120554
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.81C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.61C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-28C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/1-45097991-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097991
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097991
    reference: chr 1
allele count: 112
allele frequency: 9.290596589023824e-4
allele num: 120552
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-24C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.85C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.65C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-24C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-24C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-24C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-24C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-24C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-24C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-24C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-24C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-24C>A
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9167
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16899
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17368
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-45097992-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097992
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097992
    reference: chr 1
allele count: 2
allele frequency: 1.659090154959021e-5
allele num: 120548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-23A>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-23A>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-23A>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-23A>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-23A>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-23A>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-23A>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.86A>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-23A>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.66A>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-23A>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-23A>T
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17400
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

1-45097993-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097993
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097993
    reference: chr 1
allele count: 1
allele frequency: 8.295037908323241e-6
allele num: 120554
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-22T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-22T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-22T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-22T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-22T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-22T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-22T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.87T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-22T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-22T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.67T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-22T>C
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17400
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/1-45097994-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097994
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097994
    reference: chr 1
allele count: 4
allele frequency: 3.318015163329296e-5
allele num: 120554
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.88C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-21C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.68C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-21C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-21C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-21C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-21C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-21C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-21C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-21C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-21C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-21C>A
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17402
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

1-45097996-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097996
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097996
    reference: chr 1
allele count: 1
allele frequency: 8.29531314807134e-6
allele num: 120550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-19G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-19G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.70G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-19G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-19G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-19G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.90G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-19G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-19G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-19G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-19G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-19G>A
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17408
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

1-45097998-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45097998
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45097998
    reference: chr 1
allele count: 3
allele frequency: 2.488759104710391e-5
allele num: 120542
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-17C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-17C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-17C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-17C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.72C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-17C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-17C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-17C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-17C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-17C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.92C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-17C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

1-45098008-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098008
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098008
    reference: chr 1
allele count: 1
allele frequency: 8.29737802854298e-6
allele num: 120520
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.907-7C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.55-7C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.907-7C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.907-7C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.55-7C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.102C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.74-7C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.59-7C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.246-7C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.239-7C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.82C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.190-7C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.907-7C>T
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

1-45098016-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098016
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098016
    reference: chr 1
allele count: 40
allele frequency: 3.320053120849933e-4
allele num: 120480
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.110C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.191C>G
  hgvsp: ENSP00000414640.2:p.Thr64Ser
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.908C>G
  hgvsp: ENSP00000361321.2:p.Thr303Ser
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.56C>G
  hgvsp: ENSP00000388533.2:p.Thr19Ser
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.908C>G
  hgvsp: ENSP00000354872.2:p.Thr303Ser
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.60C>G
  hgvsp: ENSP00000475383.1:p.Asp20Glu
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.56C>G
  hgvsp: ENSP00000335580.7:p.Thr19Ser
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.247C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.75C>G
  hgvsp: ENSP00000411541.1:p.Thr26Ser
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.240C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.908C>G
  hgvsp: ENSP00000347548.2:p.Thr303Ser
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.90C>G
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9178
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16916
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr303Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

1-45098017-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098017
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098017
    reference: chr 1
allele count: 5
allele frequency: 4.150273087969188e-5
allele num: 120474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.76C>T
  hgvsp: ENST00000453863.1:c.76C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.192C>T
  hgvsp: ENST00000443020.2:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.57C>T
  hgvsp: ENST00000335497.7:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.61C>T
  hgvsp: ENSP00000475383.1:p.Leu21Phe
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.248C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.909C>T
  hgvsp: ENST00000372247.2:c.909C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.57C>T
  hgvsp: ENST00000440132.2:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.241C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.909C>T
  hgvsp: ENST00000355387.2:c.909C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.909C>T
  hgvsp: ENST00000361799.2:c.909C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.91C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.111C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17404
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu21Phe
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

1-45098017-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098017
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098017
    reference: chr 1
allele count: 1
allele frequency: 8.300546175938376e-6
allele num: 120474
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.76C>G
  hgvsp: ENST00000453863.1:c.76C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.909C>G
  hgvsp: ENST00000355387.2:c.909C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.91C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.57C>G
  hgvsp: ENST00000335497.7:c.57C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.909C>G
  hgvsp: ENST00000372247.2:c.909C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.909C>G
  hgvsp: ENST00000361799.2:c.909C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.57C>G
  hgvsp: ENST00000440132.2:c.57C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.192C>G
  hgvsp: ENST00000443020.2:c.192C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.61C>G
  hgvsp: ENSP00000475383.1:p.Leu21Val
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.241C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.111C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.248C>G
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu21Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

1-45098025-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098025
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098025
    reference: chr 1
allele count: 1
allele frequency: 8.304406317992327e-6
allele num: 120418
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.917G>T
  hgvsp: ENSP00000354872.2:p.Arg306Leu
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.84G>T
  hgvsp: ENSP00000411541.1:p.Arg29Leu
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.200G>T
  hgvsp: ENSP00000414640.2:p.Arg67Leu
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.917G>T
  hgvsp: ENSP00000361321.2:p.Arg306Leu
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.917G>T
  hgvsp: ENSP00000347548.2:p.Arg306Leu
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.65G>T
  hgvsp: ENSP00000388533.2:p.Arg22Leu
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.99G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.65G>T
  hgvsp: ENSP00000335580.7:p.Arg22Leu
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.119G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.69G>T
  hgvsp: ENST00000488865.2:c.69G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.256G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.249G>T
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg306Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-45098029-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098029
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098029
    reference: chr 1
allele count: 1
allele frequency: 8.307441806370146e-6
allele num: 120374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.123A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.69A>G
  hgvsp: ENST00000335497.7:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.204A>G
  hgvsp: ENST00000443020.2:c.204A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.253A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.103A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.73A>G
  hgvsp: ENSP00000475383.1:p.Thr25Ala
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.921A>G
  hgvsp: ENST00000361799.2:c.921A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.921A>G
  hgvsp: ENST00000372247.2:c.921A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.88A>G
  hgvsp: ENST00000453863.1:c.88A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.921A>G
  hgvsp: ENST00000355387.2:c.921A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.260A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.69A>G
  hgvsp: ENST00000440132.2:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr25Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ

1-45098034-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098034
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098034
    reference: chr 1
allele count: 24
allele frequency: 1.994747165796735e-4
allele num: 120316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.926C>G
  hgvsp: ENSP00000361321.2:p.Ala309Gly
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.926C>G
  hgvsp: ENSP00000347548.2:p.Ala309Gly
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.74C>G
  hgvsp: ENSP00000388533.2:p.Ala25Gly
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.128C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.108C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.78C>G
  hgvsp: ENSP00000475383.1:p.Ser26Arg
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.926C>G
  hgvsp: ENSP00000354872.2:p.Ala309Gly
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.209C>G
  hgvsp: ENSP00000414640.2:p.Ala70Gly
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.74C>G
  hgvsp: ENSP00000335580.7:p.Ala25Gly
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.258C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.93C>G
  hgvsp: ENSP00000411541.1:p.Ala32Gly
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.265C>G
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Ala309Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

1-45098047-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098047
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098047
    reference: chr 1
allele count: 1
allele frequency: 8.324038157390913e-6
allele num: 120134
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.141C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.121C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.106C>G
  hgvsp: ENST00000453863.1:c.106C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.222C>G
  hgvsp: ENST00000443020.2:c.222C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.87C>G
  hgvsp: ENST00000335497.7:c.87C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.271C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.91C>G
  hgvsp: ENSP00000475383.1:p.Pro31Ala
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.939C>G
  hgvsp: ENST00000361799.2:c.939C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.278C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.939C>G
  hgvsp: ENST00000372247.2:c.939C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.87C>G
  hgvsp: ENST00000440132.2:c.87C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.939C>G
  hgvsp: ENST00000355387.2:c.939C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro31Ala
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

1-45098051-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098051
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098051
    reference: chr 1
allele count: 1
allele frequency: 8.330695279828055e-6
allele num: 120038
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.95C>T
  hgvsp: ENSP00000475383.1:p.Thr32Ile
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.110C>T
  hgvsp: ENST00000453863.1:c.110C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.91C>T
  hgvsp: ENST00000440132.2:c.91C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.226C>T
  hgvsp: ENST00000443020.2:c.226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.943C>T
  hgvsp: ENST00000361799.2:c.943C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.943C>T
  hgvsp: ENST00000355387.2:c.943C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.125C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.91C>T
  hgvsp: ENST00000335497.7:c.91C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.275C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.943C>T
  hgvsp: ENST00000372247.2:c.943C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.282C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.145C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr32Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ

1-45098054-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098054
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098054
    reference: chr 1
allele count: 1
allele frequency: 8.339031671642289e-6
allele num: 119918
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.946A>G
  hgvsp: ENSP00000347548.2:p.Asn316Asp
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.94A>G
  hgvsp: ENSP00000335580.7:p.Asn32Asp
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.285A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.98A>G
  hgvsp: ENSP00000475383.1:p.Glu33Gly
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.278A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.94A>G
  hgvsp: ENSP00000388533.2:p.Asn32Asp
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.148A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.128A>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.113A>G
  hgvsp: ENSP00000411541.1:p.Asn39Asp
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.946A>G
  hgvsp: ENSP00000361321.2:p.Asn316Asp
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.946A>G
  hgvsp: ENSP00000354872.2:p.Asn316Asp
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.229A>G
  hgvsp: ENSP00000414640.2:p.Asn77Asp
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asn316Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-45098072-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098072
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098072
    reference: chr 1
allele count: 1
allele frequency: 8.498776176230622e-6
allele num: 117664
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+15G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+15G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+15G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+15G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+15G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+15G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+15G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+15G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+15G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+15G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+15G>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+15G>A
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 4489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8400
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum

1-45098072-G-GCCCCCCCCCCCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098072
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098084
    reference: chr 1
allele count: 1
allele frequency: 8.498776176230622e-6
allele num: 117664
alternate allele: GCCCCCCCCCCCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 13662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8400
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

1-45098072-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098072
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098072
    reference: chr 1
allele count: 4
allele frequency: 3.399510470492249e-5
allele num: 117664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+15G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+15G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+15G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+15G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+15G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+15G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+15G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+15G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+15G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+15G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+15G>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+15G>T
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14824
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8400
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

1-45098073-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098073
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098073
    reference: chr 1
allele count: 1
allele frequency: 8.559738414394057e-6
allele num: 116826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+16C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+16C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+16C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+16C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+16C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+16C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+16C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+16C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+16C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+16C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+16C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+16C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7876
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

1-45098074-C-CCCTCCCTCCGCCCCACCCCCGGCCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098074
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098099
    reference: chr 1
allele count: 1
allele frequency: 8.558566268978621e-6
allele num: 116842
alternate allele: CCCTCCCTCCGCCCCACCCCCGGCCT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

1-45098074-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098074
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098074
    reference: chr 1
allele count: 1
allele frequency: 8.558566268978621e-6
allele num: 116842
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+17C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+17C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+17C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+17C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+17C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+17C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+17C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+17C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+17C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+17C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+17C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+17C>G
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7863
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

1-45098074-CCCTCCCTCCGCCCCACCCCCGGCCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098074
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098049
    reference: chr 1
allele count: 1
allele frequency: 8.558566268978621e-6
allele num: 116842
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7863
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: CCCTCCCTCCGCCCCACCCCCGGCCT
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-45098077-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098077
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098077
    reference: chr 1
allele count: 23
allele frequency: 1.993827802628385e-4
allele num: 115356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+20T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+20T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+20T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+20T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+20T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+20T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+20T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+20T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+20T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+20T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+20T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+20T>C
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10719
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6872
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11326
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9796
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

1-45098079-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098079
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098079
    reference: chr 1
allele count: 1
allele frequency: 8.742022904100009e-6
allele num: 114390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+22C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+22C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+22C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+22C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+22C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+22C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+22C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+22C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+22C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+22C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+22C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+22C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12734
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5627
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6024
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-45098080-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098080
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098080
    reference: chr 1
allele count: 1
allele frequency: 8.896163974094371e-6
allele num: 112408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+23C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+23C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+23C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+23C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+23C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+23C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+23C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+23C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+23C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+23C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+23C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+23C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13741
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

1-45098081-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098081
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098081
    reference: chr 1
allele count: 26
allele frequency: 2.333806078667217e-4
allele num: 111406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+24T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+24T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+24T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+24T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+24T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+24T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+24T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+24T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+24T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+24T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+24T>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+24T>C
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 6183
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4997
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13759
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7464
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

1-45098084-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098084
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098084
    reference: chr 1
allele count: 25
allele frequency: 2.382949519597377e-4
allele num: 104912
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+27G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+27G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+27G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+27G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+27G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+27G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+27G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+27G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+27G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+27G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+27G>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+27G>C
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 4635
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13838
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4490
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

1-45098085-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098085
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098085
    reference: chr 1
allele count: 1
allele frequency: 9.938579578206683e-6
allele num: 100618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+28C>T
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+28C>T
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13574
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/1-45098089-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098089
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098089
    reference: chr 1
allele count: 23
allele frequency: 3.20727353859884e-4
allele num: 71712
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+32A>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+32A>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+32A>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+32A>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+32A>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+32A>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+32A>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+32A>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+32A>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+32A>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+32A>C
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+32A>C
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5197
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11887
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8934
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

1-45098090-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098090
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098090
    reference: chr 1
allele count: 2
allele frequency: 4.029171199484266e-5
allele num: 49638
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+33C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+33C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+33C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+33C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+33C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+33C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+33C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+33C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+33C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+33C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+33C>G
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+33C>G
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8907
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9515
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/1-45098091-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098091
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098091
    reference: chr 1
allele count: 1
allele frequency: 1.997762505993287e-5
allele num: 50056
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+34C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+34C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+34C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+34C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+34C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+34C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+34C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+34C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+34C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+34C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+34C>A
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+34C>A
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8981
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

1-45098094-CGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098094
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098092
    reference: chr 1
allele count: 1
allele frequency: 3.415300546448087e-5
allele num: 29280
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+38_101+39delGG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+38_949+39delGG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+38_97+39delGG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+38_232+39delGG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+38_288+39delGG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+38_116+39delGG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+38_949+39delGG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+38_281+39delGG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+38_131+39delGG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+38_949+39delGG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+38_97+39delGG
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+38_151+39delGG
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7762
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15065
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10093
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: CGG
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

1-45098099-T-TCCTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098099
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098103
    reference: chr 1
allele count: 155
allele frequency: 7.016749660479855e-3
allele num: 22090
alternate allele: TCCTC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  hgvsc: ENST00000488865.2:c.101+55_101+58dupCCTC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  hgvsc: ENST00000453863.1:c.116+55_116+58dupCCTC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  hgvsc: ENST00000497469.1:n.151+55_151+58dupCCTC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  hgvsc: ENST00000443020.2:c.232+55_232+58dupCCTC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  hgvsc: ENST00000361799.2:c.949+55_949+58dupCCTC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  hgvsc: ENST00000475378.1:n.131+55_131+58dupCCTC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  hgvsc: ENST00000372247.2:c.949+55_949+58dupCCTC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  hgvsc: ENST00000355387.2:c.949+55_949+58dupCCTC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  hgvsc: ENST00000474064.1:n.288+55_288+58dupCCTC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  hgvsc: ENST00000335497.7:c.97+55_97+58dupCCTC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  hgvsc: ENST00000471494.1:n.281+55_281+58dupCCTC
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  hgvsc: ENST00000440132.2:c.97+55_97+58dupCCTC
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 19669
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 2.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 12301
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 3.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 3.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4900
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 2.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 2
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

1-45098099-T-TCCTCCCTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098099
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098107
    reference: chr 1
allele count: 2
allele frequency: 9.053870529651426e-5
allele num: 22090
alternate allele: TCCTCCCTC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000411541
  ensembl transcript: ENST00000453863
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000475378
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000471494
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000474064
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000361321
  ensembl transcript: ENST00000372247
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000414640
  ensembl transcript: ENST00000443020
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl transcript: ENST00000497469
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000347548
  ensembl transcript: ENST00000355387
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000388533
  ensembl transcript: ENST00000440132
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000354872
  ensembl transcript: ENST00000361799
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000475383
  ensembl transcript: ENST00000488865
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187147
  ensembl protein: ENSP00000335580
  ensembl transcript: ENST00000335497
  gene symbol: RNF220
  variant of: http://identifiers.org/hgnc/25552
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19669
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4900
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20008
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-45098099-TCCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45098099
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 45098095
    reference: chr 1
allele count: 24
allele frequency: 1.086464463558171e-3
allele num: 22090
alternate allele: T
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
num of homozygotes: 0
reference allele: TCCTC

GenotypeQuality
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1101
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23126
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4562
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 4.13153e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-2

QD
type: SiteQuality
SIO_000300: 5.53e0

MQ
type: SiteQuality
SIO_000300: 5.705e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

VQSLOD
type: SiteQuality
SIO_000300: -1.713e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 196
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23151
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1091
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1768
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4723
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1082
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.445086705202312e-4
allele num: 6920
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.072e0

VQSLOD
type: SiteQuality
SIO_000300: -9.046e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.036e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.95e-2

DP
type: SiteQuality
SIO_000300: 4.33028e5

MQRankSum
type: SiteQuality
SIO_000300: -1.036e0

QD
type: SiteQuality
SIO_000300: 1.149e1

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21239
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23151
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1768
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1091
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1082
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.036e0

MQRankSum
type: SiteQuality
SIO_000300: -1.036e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.33028e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 1.149e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.95e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.072e0

VQSLOD
type: SiteQuality
SIO_000300: -9.046e-1

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1426
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27882
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1237
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17369
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5170
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 982
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.96e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.202e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.522e0

QD
type: SiteQuality
SIO_000300: 5.63e0

DP
type: SiteQuality
SIO_000300: 4.77453e5

GenotypeQuality
all individuals: 16823
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1095
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5155
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1092
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1907
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27947
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 219
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1038
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8818
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.76e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.713e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.48e-1

FS
type: SiteQuality
SIO_000300: 3.136e0

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.313e1

DP
type: SiteQuality
SIO_000300: 4.83074e5

GenotypeQuality
all individuals: 221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16128
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1227
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5244
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.176470588235294e-3
allele num: 850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1064
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.913e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.242e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

QD
type: SiteQuality
SIO_000300: 8.76e0

DP
type: SiteQuality
SIO_000300: 4.89813e5

GenotypeQuality
all individuals: 344
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1095
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30096
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2946
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11233
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 269
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1597
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12790
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 6.858710562414266e-4
allele num: 1458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1128
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1812
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.76e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

VQSLOD
type: SiteQuality
SIO_000300: -1.202e0

FS
type: SiteQuality
SIO_000300: 5.228e0

DP
type: SiteQuality
SIO_000300: 5.55786e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.495e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.392e0

MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 9.220000000000001e0

GenotypeQuality
all individuals: 276
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2113
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9041
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6610
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31572
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1769
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 364
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 9.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2050
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.48e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

DP
type: SiteQuality
SIO_000300: 6.02557e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e0

QD
type: SiteQuality
SIO_000300: 8.0e0

GenotypeQuality
all individuals: 7582
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32932
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7696
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1374
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1706
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18414
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.946290033817386e-5
allele num: 10054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.88e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

QD
type: SiteQuality
SIO_000300: 8.699999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.391e0

DP
type: SiteQuality
SIO_000300: 6.32626e5

FS
type: SiteQuality
SIO_000300: 1.71e0

GenotypeQuality
all individuals: 170
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15215
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26909
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4767
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1470
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 5.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4478
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.497454327643007e-4
allele num: 6678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48076
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14358
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.201e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

DP
type: SiteQuality
SIO_000300: 1.090125e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 4.39e0

MQ
type: SiteQuality
SIO_000300: 5.863e1

GenotypeQuality
all individuals: 177
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1345
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1372
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12318
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31455
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5325
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51778
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.939447383891828e-4
allele num: 6804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14852
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.11e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.153114e6

VQSLOD
type: SiteQuality
SIO_000300: 8.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 1310
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5412
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1314
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1700
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11658
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31404
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 633
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6932
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.901791487581302e-5
allele num: 52582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14950
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4952
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.189e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.061e0

DP
type: SiteQuality
SIO_000300: 1.167021e6

MQRankSum
type: SiteQuality
SIO_000300: -1.823e0

QD
type: SiteQuality
SIO_000300: 8.33e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5642
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1082
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1143
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1823
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33303
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.844950370835025e-5
allele num: 54202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.81e-1

DP
type: SiteQuality
SIO_000300: 1.196859e6

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 6.053e1

FS
type: SiteQuality
SIO_000300: 3.632e0

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

GenotypeQuality
all individuals: 85
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 109
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33303
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5642
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1823
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1082
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5206
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.844950370835025e-5
allele num: 54202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.81e-1

MQ
type: SiteQuality
SIO_000300: 6.053e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

DP
type: SiteQuality
SIO_000300: 1.196859e6

FS
type: SiteQuality
SIO_000300: 3.632e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

GenotypeQuality
all individuals: 730
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3956
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1882
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 131
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7051
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36095
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11022
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16050
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.588e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.394e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

QD
type: SiteQuality
SIO_000300: 1.234e1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

DP
type: SiteQuality
SIO_000300: 1.349525e6

GenotypeQuality
all individuals: 423
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36633
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2944
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7206
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2625
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3721
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6148
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.610720958701115e-5
allele num: 62084
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11088
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8318
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.119e1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.99e0

DP
type: SiteQuality
SIO_000300: 1.357136e6

VQSLOD
type: SiteQuality
SIO_000300: -1.704e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 8.07e0

GenotypeQuality
all individuals: 307
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3445
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7374
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3089
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2700
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36992
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 173
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2061
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11146
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.614987080103359e-4
allele num: 6192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62480
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.364877e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.576e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.86e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.08e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.109e-1

MQ
type: SiteQuality
SIO_000300: 5.615e1

QD
type: SiteQuality
SIO_000300: 1.692e1

GenotypeDepth
all individuals: 4699
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37119
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2713
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7386
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3102
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 468
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2082
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8366
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.104240282685512e-4
allele num: 9056
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.610305958132045e-4
allele num: 6210
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11168
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

FS
type: SiteQuality
SIO_000300: 2.113e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.514e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.282e1

DP
type: SiteQuality
SIO_000300: 1.368828e6

GenotypeDepth
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2133
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2727
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3094
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36607
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7333
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3132
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.592610288262462e-5
allele num: 62790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16160
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

FS
type: SiteQuality
SIO_000300: 6.037e0

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

MQRankSum
type: SiteQuality
SIO_000300: -2.763e0

DP
type: SiteQuality
SIO_000300: 1.374725e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

MQ
type: SiteQuality
SIO_000300: 5.402e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.54e-1

QD
type: SiteQuality
SIO_000300: 1.146e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.53e-1

GenotypeDepth
all individuals: 20
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36607
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7333
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2727
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3094
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2133
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3132
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 9.75e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62790
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.712871287128713e-4
allele num: 16160
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.146e1

MQRankSum
type: SiteQuality
SIO_000300: -2.763e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.54e-1

MQ
type: SiteQuality
SIO_000300: 5.402e1

FS
type: SiteQuality
SIO_000300: 6.037e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 1.374725e6

GenotypeDepth
all individuals: 15
bin: 8.25e1
variant carriers: 8

GenotypeQuality
all individuals: 7378
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 35942
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 201
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 289
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 355
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 859
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3171
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 353
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2158
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 271
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 484
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2687
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2098
bin: 9.75e1
variant carriers: 1416

GenotypeQuality
all individuals: 2750
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

South Asian
type: Population
allele count: 119
allele frequency: 7.340241796200345e-3
allele num: 16212
num of homozygotes: 3

Other
type: Population
allele count: 13
allele frequency: 1.540284360189573e-2
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 97
allele frequency: 8.619157632841656e-3
allele num: 11254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1054
allele frequency: 1.665139498878321e-2
allele num: 63298
num of homozygotes: 10

African
type: Population
allele count: 40
allele frequency: 4.337453914552158e-3
allele num: 9222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 117
allele frequency: 1.854787571337984e-2
allele num: 6308
num of homozygotes: 1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.81e0

MQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.412e1

DP
type: SiteQuality
SIO_000300: 1.412697e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

GenotypeDepth
all individuals: 56
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2468
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1655
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2828
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7565
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2290
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36166
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.157635467980295e-5
allele num: 16240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9366
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.87e0

DP
type: SiteQuality
SIO_000300: 1.421758e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.377e1

VQSLOD
type: SiteQuality
SIO_000300: -2.146e0

GenotypeDepth
all individuals: 871
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36035
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2357
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2267
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7593
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3357
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2852
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.567447255399856e-5
allele num: 63798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6338
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.54e-1

FS
type: SiteQuality
SIO_000300: 3.033e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.97e-1

DP
type: SiteQuality
SIO_000300: 1.426822e6

QD
type: SiteQuality
SIO_000300: 1.246e1

GenotypeDepth
all individuals: 96
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3299
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3233
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14839
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3734
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31644
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513683700653911e-5
allele num: 66064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.554e0

FS
type: SiteQuality
SIO_000300: 1.158e0

QD
type: SiteQuality
SIO_000300: 6.61e0

MQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.031e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

MQ
type: SiteQuality
SIO_000300: 5.908e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.570000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.233527e6

GenotypeDepth
all individuals: 62
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3727
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3287
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31916
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1370
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14846
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513867021920794e-5
allele num: 66056
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

QD
type: SiteQuality
SIO_000300: 1.477e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

MQ
type: SiteQuality
SIO_000300: 5.987e1

DP
type: SiteQuality
SIO_000300: 2.234482e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.135e0

MQRankSum
type: SiteQuality
SIO_000300: -1.052e0

FS
type: SiteQuality
SIO_000300: 5.024e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.5e-1

GenotypeDepth
all individuals: 9168
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3281
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14848
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3233
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3726
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16144018583043e-4
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66056
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.635041802980734e-4
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.824e0

FS
type: SiteQuality
SIO_000300: 8.079000000000001e0

DP
type: SiteQuality
SIO_000300: 2.23482e6

MQ
type: SiteQuality
SIO_000300: 5.157e1

QD
type: SiteQuality
SIO_000300: 1.002e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

GenotypeDepth
all individuals: 336
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3233
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 78
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3281
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3726
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14848
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66056
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.157e1

MQRankSum
type: SiteQuality
SIO_000300: -5.824e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.56e-1

FS
type: SiteQuality
SIO_000300: 8.079000000000001e0

DP
type: SiteQuality
SIO_000300: 2.23482e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 1.002e1

GenotypeDepth
all individuals: 155
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3281
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14848
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3726
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3233
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513867021920794e-5
allele num: 66056
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.002e1

MQRankSum
type: SiteQuality
SIO_000300: -5.824e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 8.079000000000001e0

DP
type: SiteQuality
SIO_000300: 2.23482e6

MQ
type: SiteQuality
SIO_000300: 5.157e1

VQSLOD
type: SiteQuality
SIO_000300: 7.56e-1

GenotypeDepth
all individuals: 1633
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 392
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3728
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32002
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14845
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3282
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66060
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

FS
type: SiteQuality
SIO_000300: 5.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.76e-1

DP
type: SiteQuality
SIO_000300: 2.234686e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.392e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e0

GenotypeDepth
all individuals: 1629
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3282
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14850
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3728
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.235338e6

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: -8.9e-2

MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.1e-1

FS
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

QD
type: SiteQuality
SIO_000300: 1.128e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

GenotypeDepth
all individuals: 3875
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32154
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14848
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3223
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3727
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3282
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 18
allele frequency: 2.091564025098768e-3
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66064
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.293e1

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

DP
type: SiteQuality
SIO_000300: 2.235874e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

FS
type: SiteQuality
SIO_000300: 1.123e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.89e-1

GenotypeDepth
all individuals: 63
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3207
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3730
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32169
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3284
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14858
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.688044952528579e-5
allele num: 10322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66060
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.72e-1

QD
type: SiteQuality
SIO_000300: 9.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.509e0

VQSLOD
type: SiteQuality
SIO_000300: -5.039e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.951e0

MQ
type: SiteQuality
SIO_000300: 5.662e1

DP
type: SiteQuality
SIO_000300: 2.234978e6

GenotypeDepth
all individuals: 193
bin: 9.75e1
variant carriers: 47

GenotypeQuality
all individuals: 3279
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3730
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 697
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3219
bin: 9.75e1
variant carriers: 112

GenotypeQuality
all individuals: 32165
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14864
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 90
allele frequency: 1.362480319728715e-3
allele num: 66056
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.298701298701299e-3
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.843084075939558e-4
allele num: 10324
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-1

FS
type: SiteQuality
SIO_000300: 5.27e-1

DP
type: SiteQuality
SIO_000300: 2.238368e6

QD
type: SiteQuality
SIO_000300: 1.139e1

MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
SIO_000300: 2.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

GenotypeDepth
all individuals: 148
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14895
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3107
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3734
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32252
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66050
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: 2.19e0

DP
type: SiteQuality
SIO_000300: 2.23223e6

QD
type: SiteQuality
SIO_000300: 1.234e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 5.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.857e-1

GenotypeDepth
all individuals: 6803
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3106
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32255
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3734
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14900
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66054
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.8e-2

FS
type: SiteQuality
SIO_000300: 3.586e0

DP
type: SiteQuality
SIO_000300: 2.232077e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.192e0

VQSLOD
type: SiteQuality
SIO_000300: -1.706e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.81e-1

QD
type: SiteQuality
SIO_000300: 1.099e1

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-1

MQ
type: SiteQuality
SIO_000300: 5.807e1

GenotypeDepth
all individuals: 146
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14900
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3106
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3734
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32273
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.874467260751647e-4
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66054
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

FS
type: SiteQuality
SIO_000300: 1.754e0

MQRankSum
type: SiteQuality
SIO_000300: 5.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.006e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.053e1

DP
type: SiteQuality
SIO_000300: 2.232188e6

GenotypeDepth
all individuals: 47
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3734
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14897
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3102
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3285
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32306
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66048
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.913e0

FS
type: SiteQuality
SIO_000300: 3.349e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.53e0

DP
type: SiteQuality
SIO_000300: 2.23237e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.28e-1

MQ
type: SiteQuality
SIO_000300: 5.884e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.83e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.834e0

QD
type: SiteQuality
SIO_000300: 1.784e1

GenotypeDepth
all individuals: 47
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3103
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3733
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32311
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14901
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.028467595396729e-5
allele num: 66040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.68429207824908e-5
allele num: 10326
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.631e0

QD
type: SiteQuality
SIO_000300: 6.96e0

VQSLOD
type: SiteQuality
SIO_000300: -1.364e0

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.439e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.01e-1

FS
type: SiteQuality
SIO_000300: 1.688e0

DP
type: SiteQuality
SIO_000300: 2.232261e6

GenotypeDepth
all individuals: 3871
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 148
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 552
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 322
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32280
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3100
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 71
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3732
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14889
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514738404677512e-5
allele num: 66018
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: -5.4e-2

MQ
type: SiteQuality
SIO_000300: 5.987e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

FS
type: SiteQuality
SIO_000300: 2.623e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-2

QD
type: SiteQuality
SIO_000300: 8.720000000000001e0

DP
type: SiteQuality
SIO_000300: 2.231849e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.594e0

GenotypeDepth
all individuals: 215
bin: 7.25e1
variant carriers: 3

GenotypeDepth
all individuals: 47
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 149
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 258
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1620
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 87
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 688
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14881
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3727
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32213
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3113
bin: 9.75e1
variant carriers: 40

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 40
allele frequency: 6.06134076857801e-4
allele num: 65992
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e-1

FS
type: SiteQuality
SIO_000300: 1.116e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.15e-1

MQ
type: SiteQuality
SIO_000300: 5.929e1

QD
type: SiteQuality
SIO_000300: 1.037e1

DP
type: SiteQuality
SIO_000300: 2.232938e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e-1

GenotypeDepth
all individuals: 9184
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 262
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1619
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 60
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 552
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1575
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3732
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14887
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32226
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3078
bin: 9.75e1
variant carriers: 5

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.062075654704171e-5
allele num: 65984
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.061e0

MQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-1

DP
type: SiteQuality
SIO_000300: 2.230556e6

FS
type: SiteQuality
SIO_000300: 5.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

QD
type: SiteQuality
SIO_000300: 1.034e1

GenotypeDepth
all individuals: 145
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 60
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 321
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17404
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 383
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3732
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14887
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32226
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3078
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515518913676043e-5
allele num: 65984
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 1.034e1

MQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.061e0

FS
type: SiteQuality
SIO_000300: 5.41e-1

DP
type: SiteQuality
SIO_000300: 2.230556e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-1

GenotypeDepth
all individuals: 144
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 212
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9184
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3281
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14874
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3072
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32150
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3729
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516208266367468e-5
allele num: 65954
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.19e-1

QD
type: SiteQuality
SIO_000300: 1.213e1

MQRankSum
type: SiteQuality
SIO_000300: 2.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

DP
type: SiteQuality
SIO_000300: 2.228975e6

MQ
type: SiteQuality
SIO_000300: 5.763e1

VQSLOD
type: SiteQuality
SIO_000300: -6.157e-1

FS
type: SiteQuality
SIO_000300: 1.497e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.658e0

GenotypeDepth
all individuals: 59
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 930
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 320
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1353
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3727
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32105
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3071
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14869
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516944267467613e-5
allele num: 65922
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.821e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 6.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.755e0

DP
type: SiteQuality
SIO_000300: 2.227956e6

MQ
type: SiteQuality
SIO_000300: 5.898e1

GenotypeDepth
all individuals: 319
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 545
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14854
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32053
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1347
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3719
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3069
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 3275
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.491090130839987e-4
allele num: 65882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
SIO_000300: 1.049e1

DP
type: SiteQuality
SIO_000300: 2.227319e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 2.812e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

GenotypeDepth
all individuals: 16919
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3041
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14814
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3261
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31697
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520635017183176e-5
allele num: 65762
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.69e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.562e-1

FS
type: SiteQuality
SIO_000300: 1.075e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 2.219477e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

QD
type: SiteQuality
SIO_000300: 8.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e0

GenotypeDepth
all individuals: 141
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1615
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 930
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3696
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3038
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31498
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1336
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3252
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14788
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521977352976988e-5
allele num: 65704
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.555e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.897e0

DP
type: SiteQuality
SIO_000300: 2.215688e6

QD
type: SiteQuality
SIO_000300: 1.531e1

MQ
type: SiteQuality
SIO_000300: 5.907e1

GenotypeDepth
all individuals: 46
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 545
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14766
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1332
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3243
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31229
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3692
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.211237e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

QD
type: SiteQuality
SIO_000300: 1.118e1

VQSLOD
type: SiteQuality
SIO_000300: 5.17e-1

FS
type: SiteQuality
SIO_000300: 1.479e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.588e0

GenotypeDepth
all individuals: 4676
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25081
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8172
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2721
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12358
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3100
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64240
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.183712121212121e-4
allele num: 8448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.28e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.933e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.964e0

DP
type: SiteQuality
SIO_000300: 2.034538e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

FS
type: SiteQuality
SIO_000300: 1.4468e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

QD
type: SiteQuality
SIO_000300: 8.09e0

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-2

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25081
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12358
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8172
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3100
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2721
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.183712121212121e-4
allele num: 8448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.964e0

FS
type: SiteQuality
SIO_000300: 1.4468e1

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.933e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

QD
type: SiteQuality
SIO_000300: 8.09e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

DP
type: SiteQuality
SIO_000300: 2.034538e6

GenotypeDepth
all individuals: 916
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8172
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3100
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 25081
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2721
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12358
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.445286709866732e-4
allele num: 16358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.4468e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.964e0

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-2

QD
type: SiteQuality
SIO_000300: 8.09e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: -4.933e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

DP
type: SiteQuality
SIO_000300: 2.034538e6

GenotypeDepth
all individuals: 318
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2323
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1473
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2057
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2674
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11574
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10711
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3003
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1169
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22412
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9734
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.127450980392157e-5
allele num: 16320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.945792e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.466e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.382e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.936e0

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

QD
type: SiteQuality
SIO_000300: 1.116e1

FS
type: SiteQuality
SIO_000300: 6.102e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.876e1

GenotypeQuality
all individuals: 10708
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11609
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1098
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2067
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22500
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2669
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.568135486906069e-5
allele num: 63770
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.64e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

DP
type: SiteQuality
SIO_000300: 1.944536e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e-1

MQ
type: SiteQuality
SIO_000300: 5.602e1

MQRankSum
type: SiteQuality
SIO_000300: -2.855e0

FS
type: SiteQuality
SIO_000300: 5.382e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.24e-2

QD
type: SiteQuality
SIO_000300: 2.46e0

GenotypeDepth
all individuals: 1756
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2067
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22500
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1098
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11609
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10708
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11326
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.026904908605463e-4
allele num: 9738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.24e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.56e-1

FS
type: SiteQuality
SIO_000300: 5.382e0

MQRankSum
type: SiteQuality
SIO_000300: -2.855e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.64e-2

QD
type: SiteQuality
SIO_000300: 2.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e-1

DP
type: SiteQuality
SIO_000300: 1.944536e6

MQ
type: SiteQuality
SIO_000300: 5.602e1

GenotypeQuality
all individuals: 22500
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2067
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11609
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1098
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10708
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.568135486906069e-5
allele num: 63770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.382e0

QD
type: SiteQuality
SIO_000300: 2.46e0

MQRankSum
type: SiteQuality
SIO_000300: -2.855e0

VQSLOD
type: SiteQuality
SIO_000300: -9.24e-2

MQ
type: SiteQuality
SIO_000300: 5.602e1

DP
type: SiteQuality
SIO_000300: 1.944536e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.64e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

GenotypeDepth
all individuals: 58
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 194
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 171
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1023
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1745
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2979
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2004
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 395
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2260
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 15243
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1846
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 8851
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2883
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 19104
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 617
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.268633047890898e-4
allele num: 63060
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.975143403441683e-4
allele num: 8368
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.23998304006784e-4
allele num: 9434
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.715170278637771e-4
allele num: 16150
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.362e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.104e0

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

MQ
type: SiteQuality
SIO_000300: 5.889e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e0

VQSLOD
type: SiteQuality
SIO_000300: -2.27e2

FS
type: SiteQuality
SIO_000300: 2.2172e2

DP
type: SiteQuality
SIO_000300: 1.838185e6

QD
type: SiteQuality
SIO_000300: 1.29e0

GenotypeDepth
all individuals: 527
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1874
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2306
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18266
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15736
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3850
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7496
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2962
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.600819619645258e-5
allele num: 62468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9238
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 1.749037e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: 6.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.377e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-3

GenotypeDepth
all individuals: 137
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4820
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2964
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1802
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1732
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3043
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21048
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3164
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11706
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6046
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.12739571589628e-4
allele num: 8870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11038
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16052
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61410
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.86e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

FS
type: SiteQuality
SIO_000300: 5.7058e1

DP
type: SiteQuality
SIO_000300: 1.658057e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.837e0

QD
type: SiteQuality
SIO_000300: 3.009e1

GenotypeDepth
all individuals: 888
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2745
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 581
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 122
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 5918
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 335
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1667
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 137
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21172
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3133
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 11616
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 115
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4853
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3151
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1743
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 662
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 151
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 506
bin: 8.75e1
variant carriers: 1

East Asian
type: Population
allele count: 5
allele frequency: 6.0960741282614e-4
allele num: 8202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.474877912883878e-4
allele num: 61022
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 6.909258406264394e-4
allele num: 8684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10950
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5914
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.785966683493185e-4
allele num: 15848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.59e0

VQSLOD
type: SiteQuality
SIO_000300: -2.831e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.542e0

FS
type: SiteQuality
SIO_000300: 2.47937e2

DP
type: SiteQuality
SIO_000300: 1.651776e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.7e-3

MQ
type: SiteQuality
SIO_000300: 5.848e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e0

MQRankSum
type: SiteQuality
SIO_000300: -4.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.211e0

GenotypeDepth
all individuals: 84
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 7472
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 123
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 151
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 139
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 475
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 403
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5703
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3397
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 809
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5241
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2684
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 24214
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1112
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 792
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4034
bin: 3.25e1
variant carriers: 1

South Asian
type: Population
allele count: 6
allele frequency: 3.922594142259414e-4
allele num: 15296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5412
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 7.944915254237289e-4
allele num: 7552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 5.039052658100278e-4
allele num: 7938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.566852367688022e-4
allele num: 57440
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.841e1

VQSLOD
type: SiteQuality
SIO_000300: -2.899e2

DP
type: SiteQuality
SIO_000300: 1.502973e6

MQRankSum
type: SiteQuality
SIO_000300: -6.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.63e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.94e0

QD
type: SiteQuality
SIO_000300: 1.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 2.50419e2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.935e0

GenotypeDepth
all individuals: 1894
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4845
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2506
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4553
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7241
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2913
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5996
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 997
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24656
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.822888184038791e-5
allele num: 54858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6974
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15084
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.469e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-2

QD
type: SiteQuality
SIO_000300: 2.009e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.43e0

VQSLOD
type: SiteQuality
SIO_000300: -1.603e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 1.433006e6

GenotypeDepth
all individuals: 6697
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16090
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 644
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2022
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 177
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2239
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 4536
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 202
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 398
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19110
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1197
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 745
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3673
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 183
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 619
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 441
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.415300546448087e-4
allele num: 11712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 3.054212267752609e-4
allele num: 39290
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.105513955071477e-4
allele num: 5876
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 8.960573476702509e-4
allele num: 4464
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e0

FS
type: SiteQuality
SIO_000300: 1.57276e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.26e0

QD
type: SiteQuality
SIO_000300: 1.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.82e-1

DP
type: SiteQuality
SIO_000300: 1.211761e6

VQSLOD
type: SiteQuality
SIO_000300: -1.167e2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.91e-2

MQ
type: SiteQuality
SIO_000300: 5.844e1

GenotypeDepth
all individuals: 43
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1411
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1711
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2348
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3015
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2064
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12268
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22882
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1189
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2574
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3044
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 7.686985932815743e-5
allele num: 26018
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.424e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.77e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.449e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

DP
type: SiteQuality
SIO_000300: 1.009439e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e0

FS
type: SiteQuality
SIO_000300: 5.444e0

QD
type: SiteQuality
SIO_000300: 1.845e1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 646
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22982
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12540
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2573
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 358
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1664
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.809523809523809e-5
allele num: 26250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1166
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4242
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.81e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
SIO_000300: 1.005297e6

MQ
type: SiteQuality
SIO_000300: 5.878e1

VQSLOD
type: SiteQuality
SIO_000300: -2.329e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.215e0

MQRankSum
type: SiteQuality
SIO_000300: 3.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.762e0

QD
type: SiteQuality
SIO_000300: 1.598e1

GenotypeDepth
all individuals: 22
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1754
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5623
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3643
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23763
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5233
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1157
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2572
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.13564929693962e-4
allele num: 2418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.26e-2

FS
type: SiteQuality
SIO_000300: 1.07352e2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.08e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.689e0

QD
type: SiteQuality
SIO_000300: 4.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.736e0

DP
type: SiteQuality
SIO_000300: 7.50395e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

GenotypeDepth
all individuals: 18
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 20008
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2469
bin: 9.75e1
variant carriers: 157

GenotypeQuality
all individuals: 449
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 202
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10123
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 682
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3860
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 434
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1019
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 313
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2742
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 1.471515661130965e-3
allele num: 9514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

East Asian
type: Population
allele count: 13
allele frequency: 7.377979568671963e-3
allele num: 1762
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1316
num of homozygotes: 0

South Asian
type: Population
allele count: 125
allele frequency: 1.57748611812216e-2
allele num: 7924
num of homozygotes: 2

Other
type: Population
allele count: 1
allele frequency: 4.901960784313725e-3
allele num: 204
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.828153564899452e-3
allele num: 1094
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.097e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

MQ
type: SiteQuality
SIO_000300: 5.769e1

QD
type: SiteQuality
SIO_000300: 1.045e1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.69e-1

DP
type: SiteQuality
SIO_000300: 6.14112e5

GenotypeQuality
all individuals: 1019
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10123
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2742
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3860
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2469
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 434
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9514
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.523977788995457e-4
allele num: 7924
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.045e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.097e0

MQ
type: SiteQuality
SIO_000300: 5.769e1

DP
type: SiteQuality
SIO_000300: 6.14112e5

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e-1