5-72795130-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795130
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795130
    reference: chr 5
allele count: 1
allele frequency: 3.787018101946527e-5
allele num: 26406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+103G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+103G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.541G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+103G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+103G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+103G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+747G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+103G>A
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26737
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5120
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28879
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

5-72795133-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795133
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795133
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 25656
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+106T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+106T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+106T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.544T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+750T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+106T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+106T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+106T>C
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15839
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29868
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/5-72795136-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795136
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795136
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 24180
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+753C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.547C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+109C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+109C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+109C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+109C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+109C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+109C>A
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28082
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15299
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4627
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12505
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30768
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD

5-72795149-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795149
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795149
    reference: chr 5
allele count: 1
allele frequency: 5.222477543346563e-5
allele num: 19148
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+122C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+122C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+766C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+122C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+122C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.560C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+122C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+122C>T
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11092
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28605
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30713
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6853
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

5-72795150-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795150
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795150
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 18758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+123G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+767G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+123G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+123G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.561G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+123G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+123G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+123G>A
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 28513
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10627
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6649
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

5-72795150-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795150
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795150
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 18758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+767G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.561G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+123G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+123G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+123G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+123G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+123G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+123G>C
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10627
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28513
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30251
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

5-72795150-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795150
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795150
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 18758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+767G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.561G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+123G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+123G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+123G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+123G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+123G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+123G>T
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28513
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10627
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30251
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

5-72795154-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795154
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795154
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 17748
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+127C>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.565C>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+127C>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+771C>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+127C>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+127C>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+127C>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+127C>G
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9299
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28430
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5444
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

5-72795156-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795156
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795156
    reference: chr 5
allele count: 1
allele frequency: 5.696058327637275e-5
allele num: 17556
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.567A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+129A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+129A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+773A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+129A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+129A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+129A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+129A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28484
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5242
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29594
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

5-72795157-GCAAAT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795157
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795152
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 17406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+132_186+136delAAATC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+132_412+136delAAATC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+132_69+136delAAATC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+132_69+136delAAATC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+132_201+136delAAATC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+776_123+780delAAATC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.570_574delAAATC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+132_155+136delAAATC
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28408
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4122
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29410
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4996
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: GCAAAT
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP

5-72795159-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795159
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795159
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 17202
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+132A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+132A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+132A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+132A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.570A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+132A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+776A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+132A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8389
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4823
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29351
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4089
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP

5-72795160-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795160
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795160
    reference: chr 5
allele count: 6
allele frequency: 3.276897870016384e-4
allele num: 18310
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+133A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+133A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+133A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.571A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+133A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+777A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+133A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+133A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28923
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8664
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25754
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4173
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD

5-72795160-AATCTC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795160
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795155
    reference: chr 5
allele count: 2624
allele frequency: 1.433096668487165e-1
allele num: 18310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+134_69+138delATCTC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+134_201+138delATCTC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.572_576delATCTC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+778_123+782delATCTC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+134_155+138delATCTC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+134_412+138delATCTC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+134_186+138delATCTC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+134_69+138delATCTC
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 28923
  bin: 2.5e0
  variant carriers: 1433
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 9.75e1
  variant carriers: 334
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 1.25e1
  variant carriers: 436
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 2.25e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 3.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 2.75e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 8664
  bin: 7.5e0
  variant carriers: 2502
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 25754
  bin: 7.5e0
  variant carriers: 98
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.75e1
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 9.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 291
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 7.75e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 1.75e1
  variant carriers: 406
num of homozygotes: 319
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: AATCTC
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/5-72795165-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795165
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795165
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 13188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+138C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+138C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.576C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+138C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+138C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+138C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+782C>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+138C>A
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27134
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24918
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3971
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

5-72795173-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795173
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795173
    reference: chr 5
allele count: 1
allele frequency: 6.035731530661516e-5
allele num: 16568
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+146G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+790G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+146G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+146G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.584G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+146G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+146G>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+146G>C
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29931
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1471
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

5-72795176-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795176
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795176
    reference: chr 5
allele count: 2386
allele frequency: 1.442737936872657e-1
allele num: 16538
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+149G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+149G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+149G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+149G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+149G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.587G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+149G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+793G>A
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5584
  bin: 7.5e0
  variant carriers: 1857
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 27649
  bin: 2.5e0
  variant carriers: 1805
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.75e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 2.75e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 1.25e1
  variant carriers: 278
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 2.25e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.25e1
  variant carriers: 136
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 3.25e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 3.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 2.25e1
  variant carriers: 289
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 7.25e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 6.75e1
  variant carriers: 113
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 1.75e1
  variant carriers: 414
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 8.25e1
  variant carriers: 190
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.75e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 5.25e1
  variant carriers: 162
num of homozygotes: 300
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

5-72795181-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795181
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795181
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 15768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+154C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.592C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+154C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+154C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+154C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+154C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+154C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+798C>T
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29753
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27779
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

5-72795192-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795192
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795192
    reference: chr 5
allele count: 7
allele frequency: 4.588960272715353e-4
allele num: 15254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+165G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.603G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+165G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+809G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+165G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+165G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+165G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+165G>A
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

5-72795195-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795195
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795195
    reference: chr 5
allele count: 1
allele frequency: 6.60414740457007e-5
allele num: 15142
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+812A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+168A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+168A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.606A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+168A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+168A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+168A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+168A>T
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2403
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4715
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

5-72795197-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795197
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795197
    reference: chr 5
allele count: 24
allele frequency: 1.592990840302668e-3
allele num: 15066
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+170A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+170A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.608A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+170A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+814A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+170A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+170A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+170A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 25480
  bin: 2.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23493
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

5-72795210-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795210
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795210
    reference: chr 5
allele count: 1
allele frequency: 6.884207627702051e-5
allele num: 14526
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+183G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+183G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.621G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+183G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+827G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+183G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+183G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+183G>A
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21880
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19504
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4373
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

5-72795216-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72795216
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72795216
    reference: chr 5
allele count: 1
allele frequency: 6.953135864274787e-5
allele num: 14382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.69+189A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.123+833A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.155+189A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.186+189A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.69+189A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.201+189A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000512257
  gene symbol: BTF3
  hgvsc: ENST00000512257.1:n.627A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.412+189A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-72798262-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798262
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798262
    reference: chr 5
allele count: 3
allele frequency: 2.682211572848866e-5
allele num: 111848
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-479T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.202-51T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.187-51T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.124-51T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.156-51T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.70-51T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.413-51T>C
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14557
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10467
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14546
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5541
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3257
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18411
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

5-72798265-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798265
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798265
    reference: chr 5
allele count: 1
allele frequency: 8.950307890591436e-6
allele num: 111728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-476G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.187-48G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.124-48G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.413-48G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.70-48G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.202-48G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.156-48G>T
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11964
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10432
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4032
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3503
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5264
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23080
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2083
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

5-72798269-TGG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798269
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798267
    reference: chr 5
allele count: 1
allele frequency: 8.933357155619082e-6
allele num: 111940
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-471_70-470delGG
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.202-43_202-42delGG
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.70-43_70-42delGG
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.413-43_413-42delGG
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.124-43_124-42delGG
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.156-43_156-42delGG
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.187-43_187-42delGG
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10072
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10074
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7897
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2520
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4732
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27690
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3252
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: TGG
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

5-72798272-T-TTTTCAACAGAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798272
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798283
    reference: chr 5
allele count: 1
allele frequency: 8.908844701019172e-6
allele num: 112248
alternate allele: TTTTCAACAGAA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10506
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1935
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3006
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4179
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD

5-72798274-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798274
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798274
    reference: chr 5
allele count: 3
allele frequency: 2.668279493382667e-5
allele num: 112432
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.70-39T>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.202-39T>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.413-39T>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.156-39T>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.124-39T>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.187-39T>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-467T>A
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25669
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10687
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8723
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1895
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3311
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

5-72798293-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798293
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798293
    reference: chr 5
allele count: 1
allele frequency: 8.663259118080221e-6
allele num: 115430
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.202-20C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.156-20C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-448C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.70-20C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.413-20C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.187-20C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.124-20C>T
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
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genotype depth: GenotypeDepth
  all individuals: 562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12696
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44419
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3595
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

5-72798294-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798294
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798294
    reference: chr 5
allele count: 1
allele frequency: 8.639905997822744e-6
allele num: 115742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.70-19C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.202-19C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.124-19C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-447C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.413-19C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.187-19C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.156-19C>T
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44932
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
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genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3004
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

5-72798295-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798295
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798295
    reference: chr 5
allele count: 1
allele frequency: 8.615193755707565e-6
allele num: 116074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.70-18T>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.202-18T>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.156-18T>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.124-18T>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.187-18T>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-446T>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.413-18T>A
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12879
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 448
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genotype quality: GenotypeQuality
  all individuals: 3670
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

5-72798299-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798299
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798299
    reference: chr 5
allele count: 8
allele frequency: 6.845564074479737e-5
allele num: 116864
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.202-14C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.156-14C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.124-14C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-442C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.187-14C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.413-14C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.70-14C>T
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 189
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3008
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2255
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

5-72798301-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798301
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798301
    reference: chr 5
allele count: 1
allele frequency: 8.522097799594348e-6
allele num: 117342
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.187-12C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.202-12C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-440C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.156-12C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.70-12C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.124-12C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.413-12C>T
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

5-72798307-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798307
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798307
    reference: chr 5
allele count: 1
allele frequency: 8.440100605999223e-6
allele num: 118482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.70-6C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.413-6C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.187-6C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-434C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.124-6C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.156-6C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.202-6C>T
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3831
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47886
  bin: 6.25e1
  variant carriers: 0
hgvs: c.202-6C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

5-72798310-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798310
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798310
    reference: chr 5
allele count: 5
allele frequency: 4.203376151725065e-5
allele num: 118952
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.156-3T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.70-3T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.124-3T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.202-3T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.413-3T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.187-3T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-431T>C
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3008
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.75e1
  variant carriers: 0
hgvs: c.202-3T>C
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-72798323-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798323
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798323
    reference: chr 5
allele count: 1
allele frequency: 8.315870006320061e-6
allele num: 120252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-418G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.80G>A
  hgvsp: ENSP00000338516.8:p.Arg27His
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.423G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.197G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.212G>A
  hgvsp: ENSP00000369965.3:p.Arg71His
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.134G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.166G>A
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3900
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg71His
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

5-72798336-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798336
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798336
    reference: chr 5
allele count: 1
allele frequency: 8.278145695364238e-6
allele num: 120800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.147G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.225G>A
  hgvsp: ENST00000380591.3:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.93G>A
  hgvsp: ENST00000335895.8:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.436G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-405G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.179G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.210G>A
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys75Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

5-72798345-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798345
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798345
    reference: chr 5
allele count: 3
allele frequency: 2.482210822439186e-5
allele num: 120860
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.445T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-396T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.234T>C
  hgvsp: ENST00000380591.3:c.234T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.156T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.102T>C
  hgvsp: ENST00000335895.8:c.102T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.219T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.188T>C
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14798
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3927
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His78His
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-72798349-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798349
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798349
    reference: chr 5
allele count: 279
allele frequency: 2.36292494537324e-3
allele num: 118074
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.192A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.449A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.238A>C
  hgvsp: ENSP00000369965.3:p.Thr80Pro
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.106A>C
  hgvsp: ENSP00000338516.8:p.Thr36Pro
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.160A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.223A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-392A>C
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 37542
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14493
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 4.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.5e0
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 2.5e0
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 49512
  bin: 6.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 8.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.75e1
  variant carriers: 14
hgvs: p.Thr80Pro
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/5-72798351-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798351
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798351
    reference: chr 5
allele count: 3
allele frequency: 2.48147167813658e-5
allele num: 120896
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.240A>C
  hgvsp: ENST00000380591.3:c.240A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.194A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.162A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.451A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.108A>C
  hgvsp: ENST00000335895.8:c.108A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-390A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.225A>C
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15738
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37860
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51453
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr80Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP

5-72798368-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798368
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798368
    reference: chr 5
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.468A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.242A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.257A>G
  hgvsp: ENSP00000369965.3:p.Lys86Arg
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.125A>G
  hgvsp: ENSP00000338516.8:p.Lys42Arg
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.179A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-373A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.211A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4039
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys86Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

5-72798377-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798377
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798377
    reference: chr 5
allele count: 1
allele frequency: 8.302889405513118e-6
allele num: 120440
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.477A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.266A>G
  hgvsp: ENSP00000369965.3:p.Gln89Arg
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.220A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.188A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.251A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-364A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.134A>G
  hgvsp: ENSP00000338516.8:p.Gln45Arg
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50737
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln89Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

5-72798399-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798399
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798399
    reference: chr 5
allele count: 180
allele frequency: 1.523100355390083e-3
allele num: 118180
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.210G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.273G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.156G>T
  hgvsp: ENST00000335895.8:c.156G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.499G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-342G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.288G>T
  hgvsp: ENST00000380591.3:c.288G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.242G>T
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 3.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 34698
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 3.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15521
  bin: 2.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly96Gly
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

5-72798400-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798400
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798400
    reference: chr 5
allele count: 1
allele frequency: 8.476012883539584e-6
allele num: 117980
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.211G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.243G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.289G>A
  hgvsp: ENSP00000369965.3:p.Val97Ile
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.157G>A
  hgvsp: ENSP00000338516.8:p.Val53Ile
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.274G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.500G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-341G>A
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2958
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val97Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

5-72798400-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798400
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798400
    reference: chr 5
allele count: 1
allele frequency: 8.476012883539584e-6
allele num: 117980
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.211G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.243G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-341G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.157G>T
  hgvsp: ENSP00000338516.8:p.Val53Leu
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.274G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.500G>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.289G>T
  hgvsp: ENSP00000369965.3:p.Val97Leu
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3782
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val97Leu
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

5-72798407-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798407
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798407
    reference: chr 5
allele count: 1
allele frequency: 8.598008701184805e-6
allele num: 116306
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.250A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.507A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.296A>G
  hgvsp: ENSP00000369965.3:p.Asn99Ser
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.218A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-334A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.164A>G
  hgvsp: ENSP00000338516.8:p.Asn55Ser
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.281A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32712
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3701
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn99Ser
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

5-72798408-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798408
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798408
    reference: chr 5
allele count: 1
allele frequency: 8.667013347200554e-6
allele num: 115380
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.297T>C
  hgvsp: ENST00000380591.3:c.297T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-333T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.219T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.508T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.282T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.251T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.165T>C
  hgvsp: ENST00000335895.8:c.165T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44010
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn99Asn
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

5-72798414-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798414
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798414
    reference: chr 5
allele count: 1
allele frequency: 8.78487595755148e-6
allele num: 113832
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.303T>C
  hgvsp: ENST00000380591.3:c.303T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.225T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-327T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.288T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.257T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.514T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.171T>C
  hgvsp: ENST00000335895.8:c.171T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6848
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2099
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3462
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser101Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

5-72798428-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798428
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798428
    reference: chr 5
allele count: 1
allele frequency: 9.426136792097127e-6
allele num: 106088
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.315+2C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.183+2C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.237+2C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.528C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.269+2C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.11+2C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-313C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.302C>T
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: splice donor
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 10868
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1728
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
hgvs: c.315+2C>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

5-72798429-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798429
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798429
    reference: chr 5
allele count: 1
allele frequency: 9.465215333648841e-6
allele num: 105650
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-312A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.269+3A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.315+3A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.183+3A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.237+3A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.529A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.11+3A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.303A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2003
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2755
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 7.5e0
  variant carriers: 0
hgvs: c.315+3A>G
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

5-72798430-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798430
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798430
    reference: chr 5
allele count: 1
allele frequency: 9.524716639679969e-6
allele num: 104990
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.11+4A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.315+4A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.530A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.183+4A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.304A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.269+4A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.237+4A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-311A>T
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7745
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12238
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2141
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
hgvs: c.315+4A>T
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-72798431-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798431
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798431
    reference: chr 5
allele count: 1
allele frequency: 9.590854161471621e-6
allele num: 104266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.531G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-310G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.11+5G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.269+5G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.315+5G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.183+5G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.237+5G>A
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.305G>A
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17251
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29450
  bin: 6.25e1
  variant carriers: 0
hgvs: c.315+5G>A
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

5-72798437-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798437
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798437
    reference: chr 5
allele count: 1
allele frequency: 9.919060466592604e-6
allele num: 100816
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-304A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.237+11A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.315+11A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.537A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.11+11A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.183+11A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.311A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.269+11A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23149
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-72798446-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798446
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798446
    reference: chr 5
allele count: 1
allele frequency: 1.041840306717786e-5
allele num: 95984
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.320A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-295A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.183+20A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.546A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.315+20A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.237+20A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.269+20A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.11+20A>C
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8871
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4638
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1742
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25889
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13406
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4672
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-72798473-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798473
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798473
    reference: chr 5
allele count: 2
allele frequency: 2.488614588258716e-5
allele num: 80366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.347A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.183+47A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-268A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.237+47A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.315+47A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.573A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.269+47A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.11+47A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21913
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4483
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1274
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5866
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5397
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

5-72798477-TTAACG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798477
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798472
    reference: chr 5
allele count: 1
allele frequency: 1.386193512614361e-5
allele num: 72140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.269+53_269+57delAACGT
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-262_70-258delAACGT
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.183+53_183+57delAACGT
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.353_357delAACGT
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.11+53_11+57delAACGT
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.579_583delAACGT
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.237+53_237+57delAACGT
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.315+53_315+57delAACGT
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3262
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21470
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9969
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10421
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4288
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: TTAACG
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

5-72798478-T-TTCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798478
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798481
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 71834
alternate allele: TTCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-263_70-262insTCC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.269+52_269+53insTCC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000510787
  gene symbol: BTF3
  hgvsc: ENST00000510787.1:n.578_579insTCC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.237+52_237+53insTCC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.352_353insTCC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.315+52_315+53insTCC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.11+52_11+53insTCC
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.183+52_183+53insTCC
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16874
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5696
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4287
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10656
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5061
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

5-72798691-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798691
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798691
    reference: chr 5
allele count: 1
allele frequency: 8.938946992044337e-6
allele num: 111870
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.270-50T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.316-50T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.12-50T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.565T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-50T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.238-50T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.184-50T>C
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2540
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15091
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3288
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1899
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6029
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2466
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2830
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-72798709-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798709
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798709
    reference: chr 5
allele count: 359
allele frequency: 3.16930628387803e-3
allele num: 113274
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.12-32A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.184-32A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.238-32A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.583A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-32A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.316-32A>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.270-32A>C
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2715
  bin: 3.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 26093
  bin: 2.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 7280
  bin: 3.25e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 13837
  bin: 2.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 4.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7358
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6390
  bin: 9.75e1
  variant carriers: 358
genotype quality: GenotypeQuality
  all individuals: 1210
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24098
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ

5-72798711-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798711
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798711
    reference: chr 5
allele count: 1
allele frequency: 8.81010695469843e-6
allele num: 113506
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-30T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.585T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.12-30T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.238-30T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.184-30T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.316-30T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.270-30T>C
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4715
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3633
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24688
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

5-72798723-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798723
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798723
    reference: chr 5
allele count: 3
allele frequency: 2.603669438128135e-5
allele num: 115222
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.270-18T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-18T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.316-18T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.597T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.238-18T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.12-18T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.184-18T>C
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14458
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6332
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26461
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2249
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3431
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

5-72798723-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798723
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798723
    reference: chr 5
allele count: 2
allele frequency: 1.735779625418757e-5
allele num: 115222
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.597T>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-18T>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.12-18T>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.184-18T>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.270-18T>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.238-18T>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.316-18T>G
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3794
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7749
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26461
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2249
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

5-72798724-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798724
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798724
    reference: chr 5
allele count: 47337
allele frequency: 4.076558732345849e-1
allele num: 116120
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.238-17T>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.316-17T>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.12-17T>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.598T>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.184-17T>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-17T>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.270-17T>G
  variant of: http://identifiers.org/hgnc/1125
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11782
  bin: 2.25e1
  variant carriers: 762
genotype depth: GenotypeDepth
  all individuals: 6959
  bin: 2.75e1
  variant carriers: 1439
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 7.5e0
  variant carriers: 458
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 6.25e1
  variant carriers: 2668
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 1.25e1
  variant carriers: 459
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 8.25e1
  variant carriers: 473
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 2.5e0
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 696
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.75e1
  variant carriers: 486
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 5.25e1
  variant carriers: 4763
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 4.25e1
  variant carriers: 4879
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 8.75e1
  variant carriers: 339
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 3.25e1
  variant carriers: 2676
genotype depth: GenotypeDepth
  all individuals: 4856
  bin: 3.75e1
  variant carriers: 4039
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 9.75e1
  variant carriers: 1186
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.25e1
  variant carriers: 281
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 5.75e1
  variant carriers: 3803
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 7.25e1
  variant carriers: 1102
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 6.75e1
  variant carriers: 1667
genotype depth: GenotypeDepth
  all individuals: 5422
  bin: 4.75e1
  variant carriers: 5178
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 95
genotype quality: GenotypeQuality
  all individuals: 37108
  bin: 9.75e1
  variant carriers: 35547
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.75e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 7.5e0
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 7.75e1
  variant carriers: 145
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 2.25e1
  variant carriers: 95
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 3.25e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.75e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 8.75e1
  variant carriers: 165
num of homozygotes: 10476
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

5-72798733-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798733
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798733
    reference: chr 5
allele count: 1
allele frequency: 8.567071603584462e-6
allele num: 116726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.607C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.270-8C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.12-8C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.316-8C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.184-8C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-8C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.238-8C>T
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3514
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.75e1
  variant carriers: 0
hgvs: c.316-8C>T
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-72798737-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798737
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798737
    reference: chr 5
allele count: 1
allele frequency: 8.553588230262596e-6
allele num: 116910
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.270-4A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.316-4A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.611A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.184-4A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.238-4A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.12-4A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.70-4A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2361
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2749
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7498
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
hgvs: c.316-4A>G
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff

5-72798745-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798745
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798745
    reference: chr 5
allele count: 1
allele frequency: 8.5260214173658e-6
allele num: 117288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.74A>G
  hgvsp: ENSP00000420978.2:p.Asn25Ser
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.274A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.242A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.16A>G
  hgvsp: ENSP00000425490.2:p.Asn6Ser
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.188A>G
  hgvsp: ENSP00000338516.8:p.Asn63Ser
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.320A>G
  hgvsp: ENSP00000369965.3:p.Asn107Ser
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.619A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9658
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30580
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn107Ser
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

5-72798756-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798756
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798756
    reference: chr 5
allele count: 1
allele frequency: 8.500365515717176e-6
allele num: 117642
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.630A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.285A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.199A>G
  hgvsp: ENSP00000338516.8:p.Asn67Asp
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.85A>G
  hgvsp: ENSP00000420978.2:p.Asn29Asp
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.331A>G
  hgvsp: ENSP00000369965.3:p.Asn111Asp
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.253A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.27A>G
  hgvsp: ENSP00000425490.2:p.Asn10Asp
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3568
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30831
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2778
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7565
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asn111Asp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-72798761-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798761
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798761
    reference: chr 5
allele count: 1
allele frequency: 8.484498820654664e-6
allele num: 117862
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.336A>G
  hgvsp: ENST00000380591.3:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.290A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.32A>G
  hgvsp: ENST00000509708.2:c.32A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.90A>G
  hgvsp: ENST00000507081.2:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.635A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.204A>G
  hgvsp: ENST00000335895.8:c.204A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.258A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7582
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln112Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

5-72798765-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798765
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798765
    reference: chr 5
allele count: 2
allele frequency: 1.692448295704566e-5
allele num: 118172
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.36A>G
  hgvsp: ENSP00000425490.2:p.Thr13Ala
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.208A>G
  hgvsp: ENSP00000338516.8:p.Thr70Ala
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.262A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.94A>G
  hgvsp: ENSP00000420978.2:p.Thr32Ala
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.294A>G
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.340A>G
  hgvsp: ENSP00000369965.3:p.Thr114Ala
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.639A>G
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8623
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31081
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3589
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7601
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr114Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-72798765-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798765
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798765
    reference: chr 5
allele count: 2
allele frequency: 1.692448295704566e-5
allele num: 118172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.639A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.94A>T
  hgvsp: ENSP00000420978.2:p.Thr32Ser
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.294A>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.36A>T
  hgvsp: ENSP00000425490.2:p.Thr13Ser
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.208A>T
  hgvsp: ENSP00000338516.8:p.Thr70Ser
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.340A>T
  hgvsp: ENSP00000369965.3:p.Thr114Ser
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.262A>T
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8623
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2787
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr114Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

5-72798769-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798769
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798769
    reference: chr 5
allele count: 3
allele frequency: 2.533527007397899e-5
allele num: 118412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.344T>C
  hgvsp: ENSP00000369965.3:p.Val115Ala
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.98T>C
  hgvsp: ENSP00000420978.2:p.Val33Ala
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.643T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.298T>C
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.40T>C
  hgvsp: ENSP00000425490.2:p.Val14Ala
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.212T>C
  hgvsp: ENSP00000338516.8:p.Val71Ala
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.266T>C
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8627
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3587
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2796
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val115Ala
num of homozygotes: 1
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-72798776-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72798776
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 72798776
    reference: chr 5
allele count: 44
allele frequency: 3.702394776257552e-4
allele num: 118842
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000338516
  ensembl transcript: ENST00000335895
  gene symbol: BTF3
  hgvsc: ENST00000335895.8:c.219C>T
  hgvsp: ENST00000335895.8:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000369965
  ensembl transcript: ENST00000380591
  gene symbol: BTF3
  hgvsc: ENST00000380591.3:c.351C>T
  hgvsp: ENST00000380591.3:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000508901
  gene symbol: BTF3
  hgvsc: ENST00000508901.1:n.305C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000425490
  ensembl transcript: ENST00000509708
  gene symbol: BTF3
  hgvsc: ENST00000509708.2:c.47C>T
  hgvsp: ENST00000509708.2:c.47C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145741
  ensembl protein: ENSP00000420978
  ensembl transcript: ENST00000507081
  gene symbol: BTF3
  hgvsc: ENST00000507081.2:c.105C>T
  hgvsp: ENST00000507081.2:c.105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514505
  gene symbol: BTF3
  hgvsc: ENST00000514505.2:n.273C>T
  variant of: http://identifiers.org/hgnc/1125
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145741
  ensembl transcript: ENST00000514360
  gene symbol: BTF3
  hgvsc: ENST00000514360.1:n.650C>T
  variant of: http://identifiers.org/hgnc/1125
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17682
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31344
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1525
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7644
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3589
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His117His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum

GenotypeQuality
all individuals: 273
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1302
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4747
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 960
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1762
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.82e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.72e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.386e0

DP
type: SiteQuality
SIO_000300: 5.48563e5

QD
type: SiteQuality
SIO_000300: 1.311e1

GenotypeQuality
all individuals: 318
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13718
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 287
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4715
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2072
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1050
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.623e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.86e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 5.38671e5

GenotypeQuality
all individuals: 1161
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 5.26688e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.11e-2

QD
type: SiteQuality
SIO_000300: 1.171e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

GenotypeQuality
all individuals: 1980
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4263
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.297690111601349e-4
allele num: 7706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.70683e5

QD
type: SiteQuality
SIO_000300: 1.826e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.05e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.95e0

MQ
type: SiteQuality
SIO_000300: 5.794e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.03e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.83e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1104
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.425e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 4.768e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.24e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

DP
type: SiteQuality
SIO_000300: 4.66693e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

QD
type: SiteQuality
SIO_000300: 1.53e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7566
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

DP
type: SiteQuality
SIO_000300: 4.66693e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.425e-1

QD
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SIO_000300: 1.53e1

FS
type: SiteQuality
SIO_000300: 4.768e0

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.24e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1104
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

FS
type: SiteQuality
SIO_000300: 4.768e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 4.66693e5

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.425e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.53e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7962
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1000
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.647e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.07e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.153e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.31e-1

DP
type: SiteQuality
SIO_000300: 4.49983e5

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
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variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.008064516129032e-3
allele num: 992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7016
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.884e0

MQRankSum
type: SiteQuality
SIO_000300: 7.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.12e-1

DP
type: SiteQuality
SIO_000300: 4.45991e5

QD
type: SiteQuality
SIO_000300: 1.746e1

FS
type: SiteQuality
SIO_000300: 9.069000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -6.807e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.049999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-1

MQ
type: SiteQuality
SIO_000300: 5.137e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 939
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GenotypeQuality
all individuals: 856
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.13e-2

MQ
type: SiteQuality
SIO_000300: 5.211e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 6.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.43418e5

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 153
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variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 978
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.13e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
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SIO_000300: -1.92e0

VQSLOD
type: SiteQuality
SIO_000300: -2.508e0

MQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

QD
type: SiteQuality
SIO_000300: 9.69e0

DP
type: SiteQuality
SIO_000300: 4.38814e5

GenotypeQuality
all individuals: 47
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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GenotypeQuality
all individuals: 285
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.871088142405972e-4
allele num: 6966
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 4.966476285075739e-4
allele num: 8054
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.32032e5

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.577e1

MQRankSum
type: SiteQuality
SIO_000300: -1.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.298e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

FS
type: SiteQuality
SIO_000300: 2.726e0

QD
type: SiteQuality
SIO_000300: 1.262e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 33

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 68

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 1481
bin: 1.25e1
variant carriers: 920

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
all individuals: 161
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GenotypeQuality
all individuals: 104
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GenotypeQuality
all individuals: 41
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GenotypeQuality
all individuals: 4242
bin: 2.25e1
variant carriers: 146

European (Finnish)
type: Population
allele count: 90
allele frequency: 1.495016611295681e-1
allele num: 602
num of homozygotes: 3

East Asian
type: Population
allele count: 340
allele frequency: 5.743243243243243e-1
allele num: 592
num of homozygotes: 93

Latino
type: Population
allele count: 63
allele frequency: 1.290983606557377e-1
allele num: 488
num of homozygotes: 5

African
type: Population
allele count: 648
allele frequency: 4.615384615384616e-1
allele num: 1404
num of homozygotes: 143

Other
type: Population
allele count: 34
allele frequency: 1.666666666666667e-1
allele num: 204
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 510
allele frequency: 7.321274763135228e-2
allele num: 6966
num of homozygotes: 15

South Asian
type: Population
allele count: 939
allele frequency: 1.16588030792153e-1
allele num: 8054
num of homozygotes: 58

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQRankSum
type: SiteQuality
SIO_000300: -1.92e0

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.298e-1

FS
type: SiteQuality
SIO_000300: 2.726e0

QD
type: SiteQuality
SIO_000300: 1.262e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 4.32032e5

MQ
type: SiteQuality
SIO_000300: 4.577e1

GenotypeQuality
all individuals: 176
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
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GenotypeQuality
all individuals: 29
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GenotypeQuality
all individuals: 18
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GenotypeQuality
all individuals: 3387
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3915
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 94
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5668
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.019999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 2.74057e5

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.78e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 1.39e1

VQSLOD
type: SiteQuality
SIO_000300: -3.329e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

GenotypeQuality
all individuals: 28358
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 187
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2986
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3949
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6008
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.258811681772407e-4
allele num: 7944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.387e0

FS
type: SiteQuality
SIO_000300: 2.334e0

QD
type: SiteQuality
SIO_000300: 1.091e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.41e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.65e0

VQSLOD
type: SiteQuality
SIO_000300: -2.033e0

MQ
type: SiteQuality
SIO_000300: 5.074e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.24e0

DP
type: SiteQuality
SIO_000300: 3.73188e5

GenotypeQuality
all individuals: 4451
bin: 2.5e0
variant carriers: 51

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 41

GenotypeQuality
all individuals: 484
bin: 2.75e1
variant carriers: 325

GenotypeQuality
all individuals: 23311
bin: 7.5e0
variant carriers: 692

GenotypeQuality
all individuals: 90
bin: 8.75e1
variant carriers: 55

GenotypeQuality
all individuals: 2134
bin: 9.75e1
variant carriers: 2082

GenotypeQuality
all individuals: 268
bin: 3.25e1
variant carriers: 157

GenotypeQuality
all individuals: 813
bin: 1.25e1
variant carriers: 431

GenotypeQuality
all individuals: 3956
bin: 6.25e1
variant carriers: 158

GenotypeQuality
all individuals: 259
bin: 5.75e1
variant carriers: 246

GenotypeQuality
all individuals: 106
bin: 9.25e1
variant carriers: 76

GenotypeQuality
all individuals: 285
bin: 7.75e1
variant carriers: 81

Latino
type: Population
allele count: 49
allele frequency: 1.262886597938144e-1
allele num: 388
num of homozygotes: 6

African
type: Population
allele count: 594
allele frequency: 4.677165354330708e-1
allele num: 1270
num of homozygotes: 133

European (Non-Finnish)
type: Population
allele count: 439
allele frequency: 7.336229946524064e-2
allele num: 5984
num of homozygotes: 13

East Asian
type: Population
allele count: 301
allele frequency: 5.85603112840467e-1
allele num: 514
num of homozygotes: 87

Other
type: Population
allele count: 33
allele frequency: 1.875e-1
allele num: 176
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 48
allele frequency: 1.791044776119403e-1
allele num: 268
num of homozygotes: 0

South Asian
type: Population
allele count: 922
allele frequency: 1.161501637692114e-1
allele num: 7938
num of homozygotes: 58

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.151e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.754e0

DP
type: SiteQuality
SIO_000300: 3.66629e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.558e1

VQSLOD
type: SiteQuality
SIO_000300: 4.38e0

QD
type: SiteQuality
SIO_000300: 1.623e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2478
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
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variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
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variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4884
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5656
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.97851e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.131e0

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.95e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.462e1

GenotypeQuality
all individuals: 2387
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 25304
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 232
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variant carriers: 0

GenotypeQuality
all individuals: 4766
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1078
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 8.91492613346918e-4
allele num: 7852
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.894e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.099e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.19e-1

MQ
type: SiteQuality
SIO_000300: 4.926e1

DP
type: SiteQuality
SIO_000300: 2.79148e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.99e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.389e1

VQSLOD
type: SiteQuality
SIO_000300: -1.861e0

GenotypeQuality
all individuals: 65
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24054
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.27420998980632e-4
allele num: 7848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 82
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.99e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.496e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.513e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.069999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.868e0

DP
type: SiteQuality
SIO_000300: 2.73273e5

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 989
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variant carriers: 0

GenotypeQuality
all individuals: 81
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variant carriers: 30

GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
all individuals: 161
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
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GenotypeQuality
all individuals: 227
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 100
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 215
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4673
bin: 6.25e1
variant carriers: 3

Other
type: Population
allele count: 1
allele frequency: 6.329113924050633e-3
allele num: 158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5212
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.906976744186046e-3
allele num: 344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

African
type: Population
allele count: 21
allele frequency: 1.977401129943503e-2
allele num: 1062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.274534794799898e-4
allele num: 7846
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.779999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.103e-1

QD
type: SiteQuality
SIO_000300: 1.482e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.916e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 2.69651e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

GenotypeQuality
all individuals: 1991
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2615
bin: 2.5e0
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GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 932
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variant carriers: 0

GenotypeQuality
all individuals: 262
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variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 230
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1012
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.059308072487644e-4
allele num: 4856
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-2

DP
type: SiteQuality
SIO_000300: 2.46264e5

BaseQRankSum
type: SiteQuality
SIO_000300: -4.561e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.245e-1

QD
type: SiteQuality
SIO_000300: 1.186e1

MQ
type: SiteQuality
SIO_000300: 5.458e1

MQRankSum
type: SiteQuality
SIO_000300: 3.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.795e0

GenotypeQuality
all individuals: 1959
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
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variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 298
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GenotypeQuality
all individuals: 215
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GenotypeQuality
all individuals: 2937
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GenotypeQuality
all individuals: 283
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GenotypeQuality
all individuals: 46
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GenotypeQuality
all individuals: 17435
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GenotypeQuality
all individuals: 188
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variant carriers: 0

GenotypeQuality
all individuals: 4151
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.09643605870021e-4
allele num: 4770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1012
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.98e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.25e-1

FS
type: SiteQuality
SIO_000300: 3.554e0

VQSLOD
type: SiteQuality
SIO_000300: -1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

QD
type: SiteQuality
SIO_000300: 1.422e1

DP
type: SiteQuality
SIO_000300: 2.35049e5

GenotypeQuality
all individuals: 2955
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2065
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4995
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5610
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4036
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3009
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 992
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2575
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.187648456057007e-3
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62804
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8242
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11142
num of homozygotes: 0

European (Finnish)
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allele count: 2
allele frequency: 3.054367745876604e-4
allele num: 6548
num of homozygotes: 0

ClippingRankSum
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VQSLOD
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MQRankSum
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FS
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BaseQRankSum
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MQ
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InbreedingCoeff
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QD
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DP
type: SiteQuality
SIO_000300: 1.339645e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.41e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.594082764777147e-5
allele num: 62732
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQ
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MQRankSum
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BaseQRankSum
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FS
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SIO_000300: 0.0e0

DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
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ClippingRankSum
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SIO_000300: -1.733e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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South Asian
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allele frequency: 8.065817067268914e-5
allele num: 12398
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 62862
num of homozygotes: 0

FS
type: SiteQuality
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QD
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SIO_000300: 1.6e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.95e-1

ReadPosRankSum
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DP
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SIO_000300: 1.373461e6

VQSLOD
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BaseQRankSum
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SIO_000300: 4.77e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 8.01153661272232e-5
allele num: 12482
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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SIO_000300: -1.538e0

VQSLOD
type: SiteQuality
SIO_000300: 6.06e-1

InbreedingCoeff
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SIO_000300: 1.1e-3

FS
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QD
type: SiteQuality
SIO_000300: 4.84e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.168266641320533e-5
allele num: 63126
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11186
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 7.984669434685404e-5
allele num: 12524
num of homozygotes: 0

African
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: -3.13e-1

FS
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BaseQRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
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QD
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DP
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VQSLOD
type: SiteQuality
SIO_000300: -2.912e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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Other
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allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.546742560168286e-5
allele num: 64652
num of homozygotes: 0

InbreedingCoeff
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BaseQRankSum
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SIO_000300: -1.313e0

VQSLOD
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FS
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DP
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MQ
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SIO_000300: 5.907e1

ClippingRankSum
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SIO_000300: -3.28e-1

QD
type: SiteQuality
SIO_000300: 7.81e0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8520
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 64810
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Other
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South Asian
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African
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allele num: 10098
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Latino
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VQSLOD
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InbreedingCoeff
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FS
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DP
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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South Asian
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

BaseQRankSum
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FS
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ClippingRankSum
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MQ
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QD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

South Asian
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Latino
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African
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European (Non-Finnish)
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Other
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East Asian
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ClippingRankSum
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MQ
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DP
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QD
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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MQ
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 165
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65770
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14916
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.569713e6

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.311e0

FS
type: SiteQuality
SIO_000300: 2.969e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.186e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.99e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.033152355242804e-5
allele num: 65938
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10224
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 1.977066034005536e-4
allele num: 15174
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.93e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.604e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 6.57e-1

DP
type: SiteQuality
SIO_000300: 1.574688e6

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 90
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15990
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507386192342478e-5
allele num: 66340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.926e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.175e0

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

FS
type: SiteQuality
SIO_000300: 2.87e0

DP
type: SiteQuality
SIO_000300: 1.591811e6

QD
type: SiteQuality
SIO_000300: 4.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.558e0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66492
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.848e-1

QD
type: SiteQuality
SIO_000300: 1.067e1

MQ
type: SiteQuality
SIO_000300: 5.921e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.409e0

DP
type: SiteQuality
SIO_000300: 1.598281e6

FS
type: SiteQuality
SIO_000300: 8.384e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.24e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

GenotypeQuality
all individuals: 332
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variant carriers: 0

GenotypeQuality
all individuals: 50015
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 275
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.510735550610453e-5
allele num: 66508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.43e-1

QD
type: SiteQuality
SIO_000300: 1.108e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

DP
type: SiteQuality
SIO_000300: 1.599261e6

VQSLOD
type: SiteQuality
SIO_000300: 4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

GenotypeQuality
all individuals: 445
bin: 2.25e1
variant carriers: 16

GenotypeQuality
all individuals: 665
bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 250
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GenotypeQuality
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variant carriers: 71

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
all individuals: 668
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GenotypeQuality
all individuals: 139
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variant carriers: 14

GenotypeQuality
all individuals: 196
bin: 3.75e1
variant carriers: 15

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.149425287356322e-3
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 70
allele frequency: 7.241878750258638e-3
allele num: 9666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16767865483419e-4
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 172
allele frequency: 2.651947331092541e-3
allele num: 64858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 35
allele frequency: 5.64880568108457e-3
allele num: 6196
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.745e0

QD
type: SiteQuality
SIO_000300: 6.5e-1

DP
type: SiteQuality
SIO_000300: 1.635348e6

VQSLOD
type: SiteQuality
SIO_000300: -2.374e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.2e-1

FS
type: SiteQuality
SIO_000300: 2.25371e2

MQ
type: SiteQuality
SIO_000300: 5.857e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.510328652614487e-5
allele num: 66514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.214e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.861e1

FS
type: SiteQuality
SIO_000300: 3.047e0

DP
type: SiteQuality
SIO_000300: 1.577159e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505389293671343e-5
allele num: 66428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.662e0

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.575685e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 6.41e-1

QD
type: SiteQuality
SIO_000300: 1.702e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
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Other
type: Population
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allele frequency: 0.0e0
allele num: 904
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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allele num: 8608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.16e-1

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.570858e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
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European (Non-Finnish)
type: Population
allele count: 40
allele frequency: 6.164088023176971e-4
allele num: 64892
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Other
type: Population
allele count: 5
allele frequency: 5.63063063063063e-3
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
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European (Finnish)
type: Population
allele count: 135
allele frequency: 2.052919708029197e-2
allele num: 6576
num of homozygotes: 1

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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MQ
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FS
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 6.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.933e0

MQRankSum
type: SiteQuality
SIO_000300: 4.83e-1

DP
type: SiteQuality
SIO_000300: 1.542438e6

QD
type: SiteQuality
SIO_000300: 1.319e1

VQSLOD
type: SiteQuality
SIO_000300: 2.47e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.008471157724889e-4
allele num: 9916
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64784
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.384e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

QD
type: SiteQuality
SIO_000300: 1.7e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15956
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.543591010125957e-5
allele num: 64784
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.536512e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

QD
type: SiteQuality
SIO_000300: 1.7e1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.567348985925206e-5
allele num: 63802
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8308
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 15662
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.511736e6

FS
type: SiteQuality
SIO_000300: 1.724e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.866e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 4.95e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.75e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.580827721394922e-5
allele num: 63258
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11230
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -9.825e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 1.498648e6

FS
type: SiteQuality
SIO_000300: 2.538e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.60374635147705e-5
allele num: 62354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15262
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 7.215e0

DP
type: SiteQuality
SIO_000300: 1.476841e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.072e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.6e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57890
num of homozygotes: 0

African
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allele frequency: 1.108401684770561e-4
allele num: 9022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14172
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.14e0

VQSLOD
type: SiteQuality
SIO_000300: -1.238e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

BaseQRankSum
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SIO_000300: -5.78e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

MQRankSum
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DP
type: SiteQuality
SIO_000300: 1.34003e6

FS
type: SiteQuality
SIO_000300: 4.8608e1

QD
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7408
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 57602
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6320
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African
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allele count: 1
allele frequency: 1.110864252388358e-4
allele num: 9002
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.722e1

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 4.1265e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.327319e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.77e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

Other
type: Population
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.747885059078515e-5
allele num: 57212
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.312719e6

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 6.07e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.124606387764283e-4
allele num: 8892
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 56822
num of homozygotes: 0

East Asian
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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MQRankSum
type: SiteQuality
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ClippingRankSum
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MQ
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FS
type: SiteQuality
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DP
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VQSLOD
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QD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 275
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6152
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.42e-1

QD
type: SiteQuality
SIO_000300: 1.186e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.211405e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

GenotypeQuality
all individuals: 1715
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 437
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GenotypeQuality
all individuals: 4621
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6012
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.919091118446304e-5
allele num: 52108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13022
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

QD
type: SiteQuality
SIO_000300: 1.483e1

VQSLOD
type: SiteQuality
SIO_000300: 5.32e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

MQRankSum
type: SiteQuality
SIO_000300: 5.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.08721e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.32e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 300
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variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43170
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.83116645303058e-4
allele num: 10922
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.107e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

DP
type: SiteQuality
SIO_000300: 9.18497e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.27e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

QD
type: SiteQuality
SIO_000300: 1.021e1

VQSLOD
type: SiteQuality
SIO_000300: -1.575e0

GenotypeQuality
all individuals: 5066
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 502
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GenotypeQuality
all individuals: 5699
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.568053415511043e-5
allele num: 38940
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5340
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.04e-1

QD
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 4.606e0

MQRankSum
type: SiteQuality
SIO_000300: -8.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 3.459e1

DP
type: SiteQuality
SIO_000300: 9.14046e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.48e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.614e0

VQSLOD
type: SiteQuality
SIO_000300: -1.57e0

GenotypeQuality
all individuals: 2086
bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 233
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GenotypeQuality
all individuals: 298
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.49e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.331e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.51e-1

DP
type: SiteQuality
SIO_000300: 9.14111e5

QD
type: SiteQuality
SIO_000300: 3.59e0

MQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.51e-1

GenotypeQuality
all individuals: 1071
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4062
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variant carriers: 0

GenotypeQuality
all individuals: 4641
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10278
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2997
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GenotypeQuality
all individuals: 1290
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variant carriers: 0

GenotypeQuality
all individuals: 5891
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variant carriers: 1

GenotypeQuality
all individuals: 1796
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.160670280926565e-5
allele num: 16232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11182
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.32e0

MQRankSum
type: SiteQuality
SIO_000300: -3.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.359e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.306e1

DP
type: SiteQuality
SIO_000300: 1.416624e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1581
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GenotypeQuality
all individuals: 2089
bin: 9.25e1
variant carriers: 1

African
type: Population
allele count: 9
allele frequency: 1.066603460535672e-3
allele num: 8438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.222120378857317e-3
allele num: 6546
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.119951040391677e-5
allele num: 16340
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.653458340704051e-4
allele num: 11306
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.15473441108545e-3
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 337
allele frequency: 5.458197013378251e-3
allele num: 61742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.572e1

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

DP
type: SiteQuality
SIO_000300: 1.543966e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 243
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GenotypeQuality
all individuals: 3319
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GenotypeQuality
all individuals: 1608
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.240079365079365e-4
allele num: 8064
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.225e0

FS
type: SiteQuality
SIO_000300: 3.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.35e-1

DP
type: SiteQuality
SIO_000300: 1.552024e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e0

MQRankSum
type: SiteQuality
SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 1.599e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
all individuals: 60
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 71
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GenotypeQuality
all individuals: 4898
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.626050420168067e-4
allele num: 11424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63016
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

FS
type: SiteQuality
SIO_000300: 3.53e0

VQSLOD
type: SiteQuality
SIO_000300: 6.8e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.586466e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

MQ
type: SiteQuality
SIO_000300: 5.994e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

GenotypeQuality
all individuals: 1469
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6332
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GenotypeQuality
all individuals: 4898
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GenotypeQuality
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GenotypeQuality
all individuals: 72
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GenotypeQuality
all individuals: 60
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GenotypeQuality
all individuals: 55
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.217285453438831e-4
allele num: 16430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.531e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

FS
type: SiteQuality
SIO_000300: 3.53e0

DP
type: SiteQuality
SIO_000300: 1.586466e6

VQSLOD
type: SiteQuality
SIO_000300: 6.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-2

MQ
type: SiteQuality
SIO_000300: 5.994e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.01e-1

GenotypeQuality
all individuals: 182
bin: 5.25e1
variant carriers: 92

GenotypeQuality
all individuals: 11871
bin: 6.25e1
variant carriers: 115

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 79

GenotypeQuality
all individuals: 117
bin: 1.25e1
variant carriers: 58

GenotypeQuality
all individuals: 174
bin: 1.75e1
variant carriers: 82

GenotypeQuality
all individuals: 2740
bin: 6.75e1
variant carriers: 104

GenotypeQuality
all individuals: 144
bin: 4.25e1
variant carriers: 49

GenotypeQuality
all individuals: 826
bin: 9.25e1
variant carriers: 282

GenotypeQuality
all individuals: 230
bin: 5.75e1
variant carriers: 94

GenotypeQuality
all individuals: 1140
bin: 8.25e1
variant carriers: 205

Other
type: Population
allele count: 364
allele frequency: 4.108352144469526e-1
allele num: 886
num of homozygotes: 75

African
type: Population
allele count: 670
allele frequency: 7.717115871918913e-2
allele num: 8682
num of homozygotes: 30

East Asian
type: Population
allele count: 2276
allele frequency: 2.732949087415946e-1
allele num: 8328
num of homozygotes: 285

European (Finnish)
type: Population
allele count: 2462
allele frequency: 3.746195982958004e-1
allele num: 6572
num of homozygotes: 446

European (Non-Finnish)
type: Population
allele count: 27486
allele frequency: 4.309501411100659e-1
allele num: 63780
num of homozygotes: 5880

South Asian
type: Population
allele count: 6847
allele frequency: 4.167884100316533e-1
allele num: 16428
num of homozygotes: 1438

Latino
type: Population
allele count: 7232
allele frequency: 6.319468717231738e-1
allele num: 11444
num of homozygotes: 2322

BaseQRankSum
type: SiteQuality
SIO_000300: 4.02e0

QD
type: SiteQuality
SIO_000300: 2.373e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.97e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.49e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.68e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.447143e6

GenotypeQuality
all individuals: 7461
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8591
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1505
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2738
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30164
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2352
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.144688644688645e-4
allele num: 8736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.435e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

DP
type: SiteQuality
SIO_000300: 1.790331e6

MQRankSum
type: SiteQuality
SIO_000300: -2.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.693e0

QD
type: SiteQuality
SIO_000300: 1.527e1

MQ
type: SiteQuality
SIO_000300: 5.783e1

VQSLOD
type: SiteQuality
SIO_000300: -1.442e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.3e-2

GenotypeQuality
all individuals: 189
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30361
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8601
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 967
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3528
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557632398753894e-5
allele num: 64200
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.228e0

FS
type: SiteQuality
SIO_000300: 1.476e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.55e-1

QD
type: SiteQuality
SIO_000300: 1.58e1

DP
type: SiteQuality
SIO_000300: 1.79373e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
all individuals: 7545
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2767
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1199
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3551
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8609
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1518
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552168379225778e-5
allele num: 64426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.79999e6

MQRankSum
type: SiteQuality
SIO_000300: 1.85e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.569e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-1

QD
type: SiteQuality
SIO_000300: 1.527e1

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2375
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1066
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8617
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1522
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546838262591263e-5
allele num: 64648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.76e-1

DP
type: SiteQuality
SIO_000300: 1.805615e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.13e-1

FS
type: SiteQuality
SIO_000300: 1.698e0

VQSLOD
type: SiteQuality
SIO_000300: 6.919999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.517e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.81e0

GenotypeQuality
all individuals: 2380
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3576
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1070
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30956
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2783
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8620
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1525
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543686322939179e-5
allele num: 64780
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.212e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.94e0

FS
type: SiteQuality
SIO_000300: 3.524e0

QD
type: SiteQuality
SIO_000300: 1.455e1

VQSLOD
type: SiteQuality
SIO_000300: -1.127e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 1.80856e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1335
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2380
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1526
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.095530236634531e-4
allele num: 9128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539219307966999e-5
allele num: 64968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.44e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

VQSLOD
type: SiteQuality
SIO_000300: 4.93e-1

FS
type: SiteQuality
SIO_000300: 5.226e0

DP
type: SiteQuality
SIO_000300: 1.812322e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

GenotypeQuality
all individuals: 305
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31081
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2380
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3589
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1526
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.078438615933998e-5
allele num: 64968
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 5.226e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: 4.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

DP
type: SiteQuality
SIO_000300: 1.812322e6

QD
type: SiteQuality
SIO_000300: 1.44e1

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31186
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7618
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1527
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9200
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535720867375146e-5
allele num: 65116
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213297743266198e-4
allele num: 16484
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.08e0

DP
type: SiteQuality
SIO_000300: 1.815246e6

QD
type: SiteQuality
SIO_000300: 2.403e1

VQSLOD
type: SiteQuality
SIO_000300: -2.061e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

FS
type: SiteQuality
SIO_000300: 5.53e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.793e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

GenotypeQuality
all individuals: 1156
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8668
bin: 9.75e1
variant carriers: 46

GenotypeQuality
all individuals: 2388
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2812
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65352
num of homozygotes: 0

African
type: Population
allele count: 43
allele frequency: 4.587155963302753e-3
allele num: 9374
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.618e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

VQSLOD
type: SiteQuality
SIO_000300: 3.76e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.822517e6

MQRankSum
type: SiteQuality
SIO_000300: 3.56e-1