6-44198309-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198309
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198309
    reference: chr 6
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.594C>T
  hgvsp: ENST00000371724.1:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.594C>T
  hgvsp: ENST00000371708.1:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.594C>T
  hgvsp: ENST00000393844.1:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.594C>T
  hgvsp: ENST00000393841.1:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.783C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.594C>T
  hgvsp: ENST00000427851.2:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.594C>T
  hgvsp: ENST00000371731.1:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.831C>T
  hgvsp: ENST00000313248.7:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.594C>T
  hgvsp: ENST00000371755.3:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.594C>T
  hgvsp: ENST00000371740.5:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.594C>T
  hgvsp: ENST00000371713.1:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly198Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

6-44198311-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198311
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198311
    reference: chr 6
allele count: 4
allele frequency: 3.295272930980509e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.596C>T
  hgvsp: ENSP00000377427.1:p.Ser199Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.596C>T
  hgvsp: ENSP00000360805.5:p.Ser199Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.596C>T
  hgvsp: ENSP00000360796.1:p.Ser199Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.596C>T
  hgvsp: ENSP00000360778.1:p.Ser199Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.596C>T
  hgvsp: ENSP00000360773.1:p.Ser199Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.596C>T
  hgvsp: ENSP00000360820.3:p.Ser199Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.596C>T
  hgvsp: ENSP00000360789.1:p.Ser199Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.785C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.833C>T
  hgvsp: ENSP00000319152.6:p.Ser278Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.596C>T
  hgvsp: ENSP00000377424.1:p.Ser199Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.596C>T
  hgvsp: ENSP00000392668.2:p.Ser199Leu
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6780
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser199Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

6-44198312-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198312
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198312
    reference: chr 6
allele count: 791
allele frequency: 6.516509589402228e-3
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.597G>A
  hgvsp: ENST00000371740.5:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.597G>A
  hgvsp: ENST00000371731.1:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.597G>A
  hgvsp: ENST00000393841.1:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.597G>A
  hgvsp: ENST00000427851.2:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.597G>A
  hgvsp: ENST00000393844.1:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.834G>A
  hgvsp: ENST00000313248.7:c.834G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.597G>A
  hgvsp: ENST00000371708.1:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.786G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.597G>A
  hgvsp: ENST00000371755.3:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.597G>A
  hgvsp: ENST00000371713.1:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.597G>A
  hgvsp: ENST00000371724.1:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19040
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 4.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 4.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.75e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 6778
  bin: 3.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 5.25e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 21152
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.75e1
  variant carriers: 60
genotype quality: GenotypeQuality
hgvs: p.Ser199Ser
num of homozygotes: 4
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

6-44198322-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198322
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198322
    reference: chr 6
allele count: 3
allele frequency: 2.47133254250692e-5
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.607G>C
  hgvsp: ENSP00000360796.1:p.Glu203Gln
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.607G>C
  hgvsp: ENSP00000360820.3:p.Glu203Gln
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.607G>C
  hgvsp: ENSP00000360805.5:p.Glu203Gln
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.607G>C
  hgvsp: ENSP00000377427.1:p.Glu203Gln
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.607G>C
  hgvsp: ENSP00000377424.1:p.Glu203Gln
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.844G>C
  hgvsp: ENSP00000319152.6:p.Glu282Gln
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.796G>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.607G>C
  hgvsp: ENSP00000360773.1:p.Glu203Gln
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.607G>C
  hgvsp: ENSP00000360789.1:p.Glu203Gln
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.607G>C
  hgvsp: ENSP00000360778.1:p.Glu203Gln
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.607G>C
  hgvsp: ENSP00000392668.2:p.Glu203Gln
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19229
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Glu203Gln
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

6-44198326-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198326
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198326
    reference: chr 6
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.848G>A
  hgvsp: ENSP00000319152.6:p.Ser283Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.800G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.611G>A
  hgvsp: ENSP00000360796.1:p.Ser204Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.611G>A
  hgvsp: ENSP00000360789.1:p.Ser204Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.611G>A
  hgvsp: ENSP00000360773.1:p.Ser204Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.611G>A
  hgvsp: ENSP00000392668.2:p.Ser204Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.611G>A
  hgvsp: ENSP00000360820.3:p.Ser204Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.611G>A
  hgvsp: ENSP00000360778.1:p.Ser204Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.611G>A
  hgvsp: ENSP00000377427.1:p.Ser204Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.611G>A
  hgvsp: ENSP00000377424.1:p.Ser204Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.611G>A
  hgvsp: ENSP00000360805.5:p.Ser204Asn
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser204Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS

6-44198333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198333
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198333
    reference: chr 6
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.618C>T
  hgvsp: ENST00000371713.1:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.618C>T
  hgvsp: ENST00000371724.1:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.855C>T
  hgvsp: ENST00000313248.7:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.618C>T
  hgvsp: ENST00000371708.1:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.618C>T
  hgvsp: ENST00000393841.1:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.807C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.618C>T
  hgvsp: ENST00000393844.1:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.618C>T
  hgvsp: ENST00000371755.3:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.618C>T
  hgvsp: ENST00000371731.1:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.618C>T
  hgvsp: ENST00000427851.2:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.618C>T
  hgvsp: ENST00000371740.5:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6858
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe206Phe
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

6-44198335-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198335
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198335
    reference: chr 6
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.620G>A
  hgvsp: ENSP00000360796.1:p.Gly207Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.620G>A
  hgvsp: ENSP00000360773.1:p.Gly207Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.809G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.857G>A
  hgvsp: ENSP00000319152.6:p.Gly286Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.620G>A
  hgvsp: ENSP00000360805.5:p.Gly207Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.620G>A
  hgvsp: ENSP00000377424.1:p.Gly207Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.620G>A
  hgvsp: ENSP00000360789.1:p.Gly207Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.620G>A
  hgvsp: ENSP00000392668.2:p.Gly207Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.620G>A
  hgvsp: ENSP00000377427.1:p.Gly207Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.620G>A
  hgvsp: ENSP00000360778.1:p.Gly207Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.620G>A
  hgvsp: ENSP00000360820.3:p.Gly207Asp
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly207Asp
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

6-44198342-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198342
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198342
    reference: chr 6
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.627T>A
  hgvsp: ENSP00000360820.3:p.Phe209Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.627T>A
  hgvsp: ENSP00000360805.5:p.Phe209Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.816T>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.864T>A
  hgvsp: ENSP00000319152.6:p.Phe288Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.627T>A
  hgvsp: ENSP00000377427.1:p.Phe209Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.627T>A
  hgvsp: ENSP00000360789.1:p.Phe209Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.627T>A
  hgvsp: ENSP00000360773.1:p.Phe209Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.627T>A
  hgvsp: ENSP00000360796.1:p.Phe209Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.627T>A
  hgvsp: ENSP00000360778.1:p.Phe209Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.627T>A
  hgvsp: ENSP00000377424.1:p.Phe209Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.627T>A
  hgvsp: ENSP00000392668.2:p.Phe209Leu
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe209Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

6-44198348-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198348
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198348
    reference: chr 6
allele count: 45
allele frequency: 3.707182047353072e-4
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.633A>T
  hgvsp: ENST00000371713.1:c.633A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.633A>T
  hgvsp: ENST00000371708.1:c.633A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.633A>T
  hgvsp: ENST00000371731.1:c.633A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.870A>T
  hgvsp: ENST00000313248.7:c.870A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.633A>T
  hgvsp: ENST00000393844.1:c.633A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.633A>T
  hgvsp: ENST00000371740.5:c.633A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.633A>T
  hgvsp: ENST00000371724.1:c.633A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.822A>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.633A>T
  hgvsp: ENST00000371755.3:c.633A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.633A>T
  hgvsp: ENST00000393841.1:c.633A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.633A>T
  hgvsp: ENST00000427851.2:c.633A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 21455
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr211Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

6-44198350-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198350
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198350
    reference: chr 6
allele count: 7
allele frequency: 5.766537606063102e-5
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.635C>G
  hgvsp: ENSP00000360805.5:p.Ala212Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.635C>G
  hgvsp: ENSP00000377424.1:p.Ala212Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.635C>G
  hgvsp: ENSP00000360796.1:p.Ala212Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.635C>G
  hgvsp: ENSP00000360773.1:p.Ala212Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.635C>G
  hgvsp: ENSP00000377427.1:p.Ala212Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.635C>G
  hgvsp: ENSP00000360789.1:p.Ala212Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.635C>G
  hgvsp: ENSP00000360778.1:p.Ala212Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.872C>G
  hgvsp: ENSP00000319152.6:p.Ala291Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.635C>G
  hgvsp: ENSP00000392668.2:p.Ala212Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.824C>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.635C>G
  hgvsp: ENSP00000360820.3:p.Ala212Gly
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6831
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Ala212Gly
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

6-44198353-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198353
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198353
    reference: chr 6
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.638G>A
  hgvsp: ENSP00000360805.5:p.Cys213Tyr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.638G>A
  hgvsp: ENSP00000360789.1:p.Cys213Tyr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.638G>A
  hgvsp: ENSP00000360773.1:p.Cys213Tyr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.638G>A
  hgvsp: ENSP00000377424.1:p.Cys213Tyr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.638G>A
  hgvsp: ENSP00000360796.1:p.Cys213Tyr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.875G>A
  hgvsp: ENSP00000319152.6:p.Cys292Tyr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.638G>A
  hgvsp: ENSP00000392668.2:p.Cys213Tyr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.638G>A
  hgvsp: ENSP00000360778.1:p.Cys213Tyr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.638G>A
  hgvsp: ENSP00000360820.3:p.Cys213Tyr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.827G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.638G>A
  hgvsp: ENSP00000377427.1:p.Cys213Tyr
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5455
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys213Tyr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

6-44198358-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198358
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198358
    reference: chr 6
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.643G>A
  hgvsp: ENSP00000392668.2:p.Val215Ile
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.643G>A
  hgvsp: ENSP00000377424.1:p.Val215Ile
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.643G>A
  hgvsp: ENSP00000360773.1:p.Val215Ile
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.832G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.643G>A
  hgvsp: ENSP00000360789.1:p.Val215Ile
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.643G>A
  hgvsp: ENSP00000360796.1:p.Val215Ile
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.643G>A
  hgvsp: ENSP00000377427.1:p.Val215Ile
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.643G>A
  hgvsp: ENSP00000360778.1:p.Val215Ile
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.643G>A
  hgvsp: ENSP00000360820.3:p.Val215Ile
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.643G>A
  hgvsp: ENSP00000360805.5:p.Val215Ile
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.880G>A
  hgvsp: ENSP00000319152.6:p.Val294Ile
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val215Ile
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

6-44198360-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198360
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198360
    reference: chr 6
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.882T>A
  hgvsp: ENST00000313248.7:c.882T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.645T>A
  hgvsp: ENST00000371708.1:c.645T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.645T>A
  hgvsp: ENST00000371713.1:c.645T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.645T>A
  hgvsp: ENST00000393841.1:c.645T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.645T>A
  hgvsp: ENST00000371731.1:c.645T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.645T>A
  hgvsp: ENST00000371724.1:c.645T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.645T>A
  hgvsp: ENST00000371755.3:c.645T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.645T>A
  hgvsp: ENST00000393844.1:c.645T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.834T>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.645T>A
  hgvsp: ENST00000371740.5:c.645T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.645T>A
  hgvsp: ENST00000427851.2:c.645T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val215Val
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

6-44198362-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198362
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198362
    reference: chr 6
allele count: 2327
allele frequency: 1.917182968626417e-2
allele num: 121376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.647T>C
  hgvsp: ENSP00000360778.1:p.Ile216Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.647T>C
  hgvsp: ENSP00000377424.1:p.Ile216Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.884T>C
  hgvsp: ENSP00000319152.6:p.Ile295Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.647T>C
  hgvsp: ENSP00000360796.1:p.Ile216Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.647T>C
  hgvsp: ENSP00000360820.3:p.Ile216Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.647T>C
  hgvsp: ENSP00000377427.1:p.Ile216Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.647T>C
  hgvsp: ENSP00000392668.2:p.Ile216Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.647T>C
  hgvsp: ENSP00000360773.1:p.Ile216Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.647T>C
  hgvsp: ENSP00000360789.1:p.Ile216Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.647T>C
  hgvsp: ENSP00000360805.5:p.Ile216Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.836T>C
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 257
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 266
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 3.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 269
genotype depth: GenotypeDepth
  all individuals: 21384
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19063
  bin: 3.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 211
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.25e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 4.25e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 171
genotype quality: GenotypeQuality
hgvs: p.Ile216Thr
num of homozygotes: 25
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

6-44198365-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198365
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198365
    reference: chr 6
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.650T>C
  hgvsp: ENSP00000360778.1:p.Ile217Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.650T>C
  hgvsp: ENSP00000377427.1:p.Ile217Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.887T>C
  hgvsp: ENSP00000319152.6:p.Ile296Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.650T>C
  hgvsp: ENSP00000360773.1:p.Ile217Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.650T>C
  hgvsp: ENSP00000392668.2:p.Ile217Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.650T>C
  hgvsp: ENSP00000360805.5:p.Ile217Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.650T>C
  hgvsp: ENSP00000360820.3:p.Ile217Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.650T>C
  hgvsp: ENSP00000360796.1:p.Ile217Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.839T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.650T>C
  hgvsp: ENSP00000377424.1:p.Ile217Thr
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.650T>C
  hgvsp: ENSP00000360789.1:p.Ile217Thr
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19845
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6955
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile217Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

6-44198378-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198378
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198378
    reference: chr 6
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.663C>T
  hgvsp: ENST00000427851.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.663C>T
  hgvsp: ENST00000371708.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.663C>T
  hgvsp: ENST00000393844.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.663C>T
  hgvsp: ENST00000371713.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.663C>T
  hgvsp: ENST00000371724.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.900C>T
  hgvsp: ENST00000313248.7:c.900C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.663C>T
  hgvsp: ENST00000393841.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.663C>T
  hgvsp: ENST00000371755.3:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.663C>T
  hgvsp: ENST00000371731.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.663C>T
  hgvsp: ENST00000371740.5:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.852C>T
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile221Ile
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

6-44198380-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198380
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198380
    reference: chr 6
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.665G>C
  hgvsp: ENSP00000360789.1:p.Cys222Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.902G>C
  hgvsp: ENSP00000319152.6:p.Cys301Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.665G>C
  hgvsp: ENSP00000360820.3:p.Cys222Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.665G>C
  hgvsp: ENSP00000360773.1:p.Cys222Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.665G>C
  hgvsp: ENSP00000360796.1:p.Cys222Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.665G>C
  hgvsp: ENSP00000392668.2:p.Cys222Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.665G>C
  hgvsp: ENSP00000377427.1:p.Cys222Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.665G>C
  hgvsp: ENSP00000377424.1:p.Cys222Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.665G>C
  hgvsp: ENSP00000360805.5:p.Cys222Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.854G>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.665G>C
  hgvsp: ENSP00000360778.1:p.Cys222Ser
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19784
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys222Ser
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

6-44198388-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198388
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198388
    reference: chr 6
allele count: 17
allele frequency: 1.402431982048871e-4
allele num: 121218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.862G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.673G>A
  hgvsp: ENSP00000360820.3:p.Gly225Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.673G>A
  hgvsp: ENSP00000360796.1:p.Gly225Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.673G>A
  hgvsp: ENSP00000392668.2:p.Gly225Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.910G>A
  hgvsp: ENSP00000319152.6:p.Gly304Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.673G>A
  hgvsp: ENSP00000360778.1:p.Gly225Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.673G>A
  hgvsp: ENSP00000360789.1:p.Gly225Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.673G>A
  hgvsp: ENSP00000360773.1:p.Gly225Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.673G>A
  hgvsp: ENSP00000377427.1:p.Gly225Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.673G>A
  hgvsp: ENSP00000377424.1:p.Gly225Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.673G>A
  hgvsp: ENSP00000360805.5:p.Gly225Ser
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21923
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19623
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly225Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD

6-44198388-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198388
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198388
    reference: chr 6
allele count: 2
allele frequency: 1.649919978881024e-5
allele num: 121218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.862G>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.673G>C
  hgvsp: ENSP00000360796.1:p.Gly225Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.673G>C
  hgvsp: ENSP00000377427.1:p.Gly225Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.673G>C
  hgvsp: ENSP00000360773.1:p.Gly225Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.673G>C
  hgvsp: ENSP00000360820.3:p.Gly225Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.673G>C
  hgvsp: ENSP00000377424.1:p.Gly225Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.673G>C
  hgvsp: ENSP00000360789.1:p.Gly225Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.910G>C
  hgvsp: ENSP00000319152.6:p.Gly304Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.673G>C
  hgvsp: ENSP00000360805.5:p.Gly225Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.673G>C
  hgvsp: ENSP00000360778.1:p.Gly225Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.673G>C
  hgvsp: ENSP00000392668.2:p.Gly225Arg
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly225Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

6-44198391-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198391
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198391
    reference: chr 6
allele count: 2
allele frequency: 1.650301179965344e-5
allele num: 121190
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.676C>T
  hgvsp: ENST00000371713.1:c.676C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.913C>T
  hgvsp: ENST00000313248.7:c.913C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.676C>T
  hgvsp: ENST00000371755.3:c.676C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.865C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.676C>T
  hgvsp: ENST00000371731.1:c.676C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.676C>T
  hgvsp: ENST00000393841.1:c.676C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.676C>T
  hgvsp: ENST00000371708.1:c.676C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.676C>T
  hgvsp: ENST00000393844.1:c.676C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.676C>T
  hgvsp: ENST00000371740.5:c.676C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.676C>T
  hgvsp: ENST00000371724.1:c.676C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.676C>T
  hgvsp: ENST00000427851.2:c.676C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu226Leu
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

6-44198394-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198394
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198394
    reference: chr 6
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.679C>T
  hgvsp: ENSP00000360796.1:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.679C>T
  hgvsp: ENSP00000360773.1:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.679C>T
  hgvsp: ENSP00000360820.3:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.916C>T
  hgvsp: ENSP00000319152.6:p.Pro306Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.868C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.679C>T
  hgvsp: ENSP00000377424.1:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.679C>T
  hgvsp: ENSP00000360778.1:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.679C>T
  hgvsp: ENSP00000392668.2:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.679C>T
  hgvsp: ENSP00000360789.1:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.679C>T
  hgvsp: ENSP00000377427.1:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.679C>T
  hgvsp: ENSP00000360805.5:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro227Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

6-44198395-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198395
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198395
    reference: chr 6
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.680C>T
  hgvsp: ENSP00000360789.1:p.Pro227Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.680C>T
  hgvsp: ENSP00000377424.1:p.Pro227Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.680C>T
  hgvsp: ENSP00000360805.5:p.Pro227Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.680C>T
  hgvsp: ENSP00000360773.1:p.Pro227Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.680C>T
  hgvsp: ENSP00000360778.1:p.Pro227Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.680C>T
  hgvsp: ENSP00000392668.2:p.Pro227Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.680C>T
  hgvsp: ENSP00000360796.1:p.Pro227Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.680C>T
  hgvsp: ENSP00000360820.3:p.Pro227Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.917C>T
  hgvsp: ENSP00000319152.6:p.Pro306Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.869C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.680C>T
  hgvsp: ENSP00000377427.1:p.Pro227Leu
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro227Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

6-44198397-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198397
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198397
    reference: chr 6
allele count: 2
allele frequency: 1.651118632873772e-5
allele num: 121130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.682C>T
  hgvsp: ENSP00000360796.1:p.Arg228Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.919C>T
  hgvsp: ENSP00000319152.6:p.Arg307Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.682C>T
  hgvsp: ENSP00000360773.1:p.Arg228Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.682C>T
  hgvsp: ENSP00000360805.5:p.Arg228Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.682C>T
  hgvsp: ENSP00000360778.1:p.Arg228Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.682C>T
  hgvsp: ENSP00000377424.1:p.Arg228Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.871C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.682C>T
  hgvsp: ENSP00000360789.1:p.Arg228Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.682C>T
  hgvsp: ENSP00000377427.1:p.Arg228Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.682C>T
  hgvsp: ENSP00000360820.3:p.Arg228Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.682C>T
  hgvsp: ENSP00000392668.2:p.Arg228Cys
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5557
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg228Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

6-44198402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198402
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198402
    reference: chr 6
allele count: 8
allele frequency: 6.609712973214139e-5
allele num: 121034
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924G>A
  hgvsp: ENST00000313248.7:c.924G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687G>A
  hgvsp: ENST00000371708.1:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687G>A
  hgvsp: ENST00000371740.5:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687G>A
  hgvsp: ENST00000371713.1:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687G>A
  hgvsp: ENST00000371755.3:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687G>A
  hgvsp: ENST00000393844.1:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687G>A
  hgvsp: ENST00000371731.1:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687G>A
  hgvsp: ENST00000393841.1:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687G>A
  hgvsp: ENST00000371724.1:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687G>A
  hgvsp: ENST00000427851.2:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.687G>A
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-44198409-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198409
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198409
    reference: chr 6
allele count: 1
allele frequency: 8.278145695364238e-6
allele num: 120800
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+7A>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+7A>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+7A>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+7A>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+7A>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+7A>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+7A>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+7A>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+7A>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+7A>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+7A>C
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.687+7A>C
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-44198422-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198422
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198422
    reference: chr 6
allele count: 7
allele frequency: 5.872778831149219e-5
allele num: 119194
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+20T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+20T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+20T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+20T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+20T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+20T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+20T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+20T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+20T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+20T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+20T>G
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12058
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15424
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4725
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6666
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

6-44198425-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198425
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198425
    reference: chr 6
allele count: 1
allele frequency: 8.360225391676559e-6
allele num: 119614
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+23G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+23G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+23G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+23G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+23G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+23G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+23G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+23G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+23G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+23G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+23G>A
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16181
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4815
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4917
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

6-44198429-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198429
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198428
    reference: chr 6
allele count: 1
allele frequency: 8.557101538566857e-6
allele num: 116862
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+31delG
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+31delG
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+31delG
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+31delG
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+31delG
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+31delG
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+31delG
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+31delG
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+31delG
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+31delG
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+31delG
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 14510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9711
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10220
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: TG
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

6-44198430-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198430
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198430
    reference: chr 6
allele count: 2
allele frequency: 1.720489307158956e-5
allele num: 116246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+28G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+28G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+28G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+28G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+28G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+28G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+28G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+28G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+28G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+28G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+28G>A
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4990
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11214
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-44198434-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198434
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198434
    reference: chr 6
allele count: 1
allele frequency: 8.535044894336143e-6
allele num: 117164
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+32T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+32T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+32T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+32T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+32T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+32T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+32T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+32T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+32T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+32T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+32T>C
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8490
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

6-44198434-TATAGGGGTCTGGGG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198434
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198420
    reference: chr 6
allele count: 14
allele frequency: 1.19490628520706e-4
allele num: 117164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 8490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10478
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12068
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5560
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3968
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2508
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: TATAGGGGTCTGGGG
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP

6-44198437-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198437
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198437
    reference: chr 6
allele count: 33
allele frequency: 3.213743134276031e-4
allele num: 102684
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+35A>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+35A>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+35A>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+35A>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+35A>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+35A>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+35A>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+35A>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+35A>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+35A>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+35A>G
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10396
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 8412
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12237
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5019
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12867
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4631
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD

6-44198438-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198438
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198438
    reference: chr 6
allele count: 6
allele frequency: 5.124525981346726e-5
allele num: 117084
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+36G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+36G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+36G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+36G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+36G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+36G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+36G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+36G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+36G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+36G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+36G>A
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12113
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13150
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

6-44198443-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198443
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198443
    reference: chr 6
allele count: 11
allele frequency: 9.829678480152986e-5
allele num: 111906
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+41C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+41C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+41C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+41C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+41C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+41C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+41C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+41C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+41C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+41C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+41C>T
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 12695
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7908
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13173
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10052
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5118
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ

6-44198444-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198444
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198444
    reference: chr 6
allele count: 98
allele frequency: 1.143310467123991e-3
allele num: 85716
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+42T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+42T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+42T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+42T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+42T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+42T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+42T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+42T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+42T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+42T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+42T>G
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 12622
  bin: 2.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9364
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8538
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12523
  bin: 2.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3295
  bin: 3.25e1
  variant carriers: 17
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

6-44198445-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198445
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198445
    reference: chr 6
allele count: 1
allele frequency: 8.510638297872341e-6
allele num: 117500
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+43G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+43G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+43G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+43G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+43G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+43G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+43G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+43G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+43G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+43G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+43G>A
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8033
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9256
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4410
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

6-44198446-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198446
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198446
    reference: chr 6
allele count: 1
allele frequency: 8.491559389966374e-6
allele num: 117764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+44G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+44G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+44G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+44G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+44G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+44G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+44G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+44G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+44G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+44G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+44G>T
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12280
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6689
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

6-44198448-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198448
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198448
    reference: chr 6
allele count: 5
allele frequency: 4.552987670509388e-5
allele num: 109818
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+46G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+46G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+46G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+46G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+46G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+46G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+46G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+46G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+46G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+46G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+46G>T
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7480
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13074
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9267
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12604
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5649
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

6-44198451-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198451
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198451
    reference: chr 6
allele count: 2
allele frequency: 1.697331794419173e-5
allele num: 117832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.687+49C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.687+49C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.687+49C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.687+49C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.687+49C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.687+49C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.687+49C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.924+49C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.687+49C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.876+49C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.687+49C>T
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5696
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

6-44198509-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198509
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198509
    reference: chr 6
allele count: 1
allele frequency: 8.258865892535638e-6
allele num: 121082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-39G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-39G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-39G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-39G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-39G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-39G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-39G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-39G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-39G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-39G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-39G>A
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8712
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum

6-44198510-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198510
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198510
    reference: chr 6
allele count: 3
allele frequency: 2.477659767760691e-5
allele num: 121082
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-38C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-38C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-38C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-38C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-38C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-38C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-38C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-38C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-38C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-38C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-38C>T
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7568
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6352
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

6-44198513-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198513
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198513
    reference: chr 6
allele count: 1
allele frequency: 8.258047467256841e-6
allele num: 121094
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-35C>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-35C>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-35C>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-35C>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-35C>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-35C>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-35C>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-35C>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-35C>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-35C>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-35C>G
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6356
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-44198523-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198523
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198523
    reference: chr 6
allele count: 1
allele frequency: 8.269930532583527e-6
allele num: 120920
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-25C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-25C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-25C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-25C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-25C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-25C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-25C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-25C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-25C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-25C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-25C>T
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

6-44198524-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198524
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198524
    reference: chr 6
allele count: 1
allele frequency: 8.269109913008963e-6
allele num: 120932
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-24T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-24T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-24T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-24T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-24T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-24T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-24T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-24T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-24T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-24T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-24T>C
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 6358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP

6-44198524-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198524
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198523
    reference: chr 6
allele count: 1
allele frequency: 8.269109913008963e-6
allele num: 120932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-19delC
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-19delC
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-19delC
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-19delC
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-19delC
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-19delC
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-19delC
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-19delC
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-19delC
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-19delC
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-19delC
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7569
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6358
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: TC
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

6-44198529-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198529
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198529
    reference: chr 6
allele count: 6
allele frequency: 4.956465709518066e-5
allele num: 121054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-19C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-19C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-19C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-19C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-19C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-19C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-19C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-19C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-19C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-19C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-19C>T
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4952
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7675
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

6-44198530-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198530
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198530
    reference: chr 6
allele count: 17
allele frequency: 1.404192754365388e-4
allele num: 121066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-18G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-18G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-18G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-18G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-18G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-18G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-18G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-18G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-18G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-18G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-18G>A
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7689
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4952
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5131
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

6-44198530-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198530
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198530
    reference: chr 6
allele count: 1
allele frequency: 8.259957378619926e-6
allele num: 121066
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-18G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-18G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-18G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-18G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-18G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-18G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-18G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-18G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-18G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-18G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-18G>T
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4952
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6350
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS

6-44198535-CCTTA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198535
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198531
    reference: chr 6
allele count: 1
allele frequency: 8.258047467256841e-6
allele num: 121094
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-9_688-6delACTT
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-9_688-6delACTT
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-9_877-6delACTT
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-9_925-6delACTT
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-9_688-6delACTT
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-9_688-6delACTT
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-9_688-6delACTT
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-9_688-6delACTT
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-9_688-6delACTT
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-9_688-6delACTT
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-9_688-6delACTT
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6350
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4391
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: CCTTA
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

6-44198536-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198536
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198536
    reference: chr 6
allele count: 669
allele frequency: 5.524816252374267e-3
allele num: 121090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-12C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-12C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-12C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-12C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-12C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-12C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-12C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-12C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-12C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-12C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-12C>T
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 7.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 6.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 7491
  bin: 4.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 6.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 6287
  bin: 4.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 7630
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 5.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 7.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 9946
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8626
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 8.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 5.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 8.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 9.75e1
  variant carriers: 146
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5103
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 2
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-44198538-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198538
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198538
    reference: chr 6
allele count: 1
allele frequency: 8.258320257659592e-6
allele num: 121090
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-10T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-10T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-10T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-10T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-10T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-10T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-10T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-10T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-10T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-10T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-10T>C
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

6-44198542-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198542
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198542
    reference: chr 6
allele count: 1
allele frequency: 8.25695648583932e-6
allele num: 121110
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.688-6T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.688-6T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.688-6T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.688-6T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.877-6T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.925-6T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.688-6T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.688-6T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.688-6T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.688-6T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.688-6T>G
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.688-6T>G
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP

6-44198550-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198550
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198550
    reference: chr 6
allele count: 4
allele frequency: 3.301419610432486e-5
allele num: 121160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.690A>G
  hgvsp: ENST00000371708.1:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.690A>G
  hgvsp: ENST00000427851.2:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.690A>G
  hgvsp: ENST00000371755.3:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.879A>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.927A>G
  hgvsp: ENST00000313248.7:c.927A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.690A>G
  hgvsp: ENST00000371740.5:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.690A>G
  hgvsp: ENST00000371713.1:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.690A>G
  hgvsp: ENST00000393844.1:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.690A>G
  hgvsp: ENST00000393841.1:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.690A>G
  hgvsp: ENST00000371724.1:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.690A>G
  hgvsp: ENST00000371731.1:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.690A>G
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

6-44198557-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198557
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198557
    reference: chr 6
allele count: 3
allele frequency: 2.475247524752475e-5
allele num: 121200
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.697C>T
  hgvsp: ENSP00000377424.1:p.Arg233Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.697C>T
  hgvsp: ENSP00000360796.1:p.Arg233Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.697C>T
  hgvsp: ENSP00000360805.5:p.Arg233Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.697C>T
  hgvsp: ENSP00000360820.3:p.Arg233Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.697C>T
  hgvsp: ENSP00000377427.1:p.Arg233Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.697C>T
  hgvsp: ENSP00000360789.1:p.Arg233Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.697C>T
  hgvsp: ENSP00000360778.1:p.Arg233Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.697C>T
  hgvsp: ENSP00000392668.2:p.Arg233Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.934C>T
  hgvsp: ENSP00000319152.6:p.Arg312Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.697C>T
  hgvsp: ENSP00000360773.1:p.Arg233Cys
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.886C>T
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg233Cys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

6-44198558-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198558
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198558
    reference: chr 6
allele count: 4
allele frequency: 3.300275573010346e-5
allele num: 121202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.935G>A
  hgvsp: ENSP00000319152.6:p.Arg312His
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.698G>A
  hgvsp: ENSP00000377427.1:p.Arg233His
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.698G>A
  hgvsp: ENSP00000360820.3:p.Arg233His
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.698G>A
  hgvsp: ENSP00000360773.1:p.Arg233His
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.698G>A
  hgvsp: ENSP00000377424.1:p.Arg233His
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.698G>A
  hgvsp: ENSP00000360778.1:p.Arg233His
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.698G>A
  hgvsp: ENSP00000360789.1:p.Arg233His
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.698G>A
  hgvsp: ENSP00000360796.1:p.Arg233His
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.698G>A
  hgvsp: ENSP00000392668.2:p.Arg233His
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.698G>A
  hgvsp: ENSP00000360805.5:p.Arg233His
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.887G>A
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg233His
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

6-44198562-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198562
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198562
    reference: chr 6
allele count: 1
allele frequency: 8.248919391559706e-6
allele num: 121228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.702C>T
  hgvsp: ENST00000371708.1:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.939C>T
  hgvsp: ENST00000313248.7:c.939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.702C>T
  hgvsp: ENST00000371755.3:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.702C>T
  hgvsp: ENST00000371731.1:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.702C>T
  hgvsp: ENST00000393844.1:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.702C>T
  hgvsp: ENST00000371713.1:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.702C>T
  hgvsp: ENST00000393841.1:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.702C>T
  hgvsp: ENST00000371724.1:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.702C>T
  hgvsp: ENST00000371740.5:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.702C>T
  hgvsp: ENST00000427851.2:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.891C>T
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr234Tyr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

6-44198565-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198565
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198565
    reference: chr 6
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.894C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.705C>T
  hgvsp: ENST00000371724.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.942C>T
  hgvsp: ENST00000313248.7:c.942C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.705C>T
  hgvsp: ENST00000371740.5:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.705C>T
  hgvsp: ENST00000427851.2:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.705C>T
  hgvsp: ENST00000393844.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.705C>T
  hgvsp: ENST00000393841.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.705C>T
  hgvsp: ENST00000371755.3:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.705C>T
  hgvsp: ENST00000371708.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.705C>T
  hgvsp: ENST00000371731.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.705C>T
  hgvsp: ENST00000371713.1:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7733
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr235Tyr
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS

6-44198570-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198570
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198570
    reference: chr 6
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.710A>T
  hgvsp: ENSP00000360773.1:p.Gln237Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.710A>T
  hgvsp: ENSP00000360805.5:p.Gln237Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.710A>T
  hgvsp: ENSP00000377424.1:p.Gln237Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.899A>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.710A>T
  hgvsp: ENSP00000360789.1:p.Gln237Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.710A>T
  hgvsp: ENSP00000377427.1:p.Gln237Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.947A>T
  hgvsp: ENSP00000319152.6:p.Gln316Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.710A>T
  hgvsp: ENSP00000360796.1:p.Gln237Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.710A>T
  hgvsp: ENSP00000360778.1:p.Gln237Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.710A>T
  hgvsp: ENSP00000360820.3:p.Gln237Leu
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.710A>T
  hgvsp: ENSP00000392668.2:p.Gln237Leu
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4957
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln237Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

6-44198580-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198580
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198580
    reference: chr 6
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.957T>G
  hgvsp: ENST00000313248.7:c.957T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.720T>G
  hgvsp: ENST00000371724.1:c.720T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.720T>G
  hgvsp: ENST00000371708.1:c.720T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.720T>G
  hgvsp: ENST00000371731.1:c.720T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.720T>G
  hgvsp: ENST00000393844.1:c.720T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.720T>G
  hgvsp: ENST00000393841.1:c.720T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.909T>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.720T>G
  hgvsp: ENST00000371755.3:c.720T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.720T>G
  hgvsp: ENST00000371713.1:c.720T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.720T>G
  hgvsp: ENST00000371740.5:c.720T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.720T>G
  hgvsp: ENST00000427851.2:c.720T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu240Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum

6-44198582-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198582
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198582
    reference: chr 6
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.722A>G
  hgvsp: ENSP00000360796.1:p.Glu241Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.722A>G
  hgvsp: ENSP00000360773.1:p.Glu241Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.959A>G
  hgvsp: ENSP00000319152.6:p.Glu320Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.722A>G
  hgvsp: ENSP00000360789.1:p.Glu241Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.722A>G
  hgvsp: ENSP00000360820.3:p.Glu241Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.722A>G
  hgvsp: ENSP00000392668.2:p.Glu241Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.722A>G
  hgvsp: ENSP00000360778.1:p.Glu241Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.911A>G
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.722A>G
  hgvsp: ENSP00000377424.1:p.Glu241Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.722A>G
  hgvsp: ENSP00000377427.1:p.Glu241Gly
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.722A>G
  hgvsp: ENSP00000360805.5:p.Glu241Gly
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu241Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

6-44198589-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198589
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198589
    reference: chr 6
allele count: 6
allele frequency: 4.94600610007419e-5
allele num: 121310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.729C>T
  hgvsp: ENST00000371713.1:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.729C>T
  hgvsp: ENST00000371731.1:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.729C>T
  hgvsp: ENST00000393844.1:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.729C>T
  hgvsp: ENST00000371740.5:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.729C>T
  hgvsp: ENST00000371755.3:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.918C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.729C>T
  hgvsp: ENST00000427851.2:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.729C>T
  hgvsp: ENST00000371708.1:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.966C>T
  hgvsp: ENST00000313248.7:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.729C>T
  hgvsp: ENST00000393841.1:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.729C>T
  hgvsp: ENST00000371724.1:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro243Pro
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/6-44198589-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198589
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198589
    reference: chr 6
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.729C>A
  hgvsp: ENST00000371713.1:c.729C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.729C>A
  hgvsp: ENST00000371755.3:c.729C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.966C>A
  hgvsp: ENST00000313248.7:c.966C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.729C>A
  hgvsp: ENST00000393841.1:c.729C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.918C>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.729C>A
  hgvsp: ENST00000371740.5:c.729C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.729C>A
  hgvsp: ENST00000371724.1:c.729C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.729C>A
  hgvsp: ENST00000371708.1:c.729C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.729C>A
  hgvsp: ENST00000427851.2:c.729C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.729C>A
  hgvsp: ENST00000371731.1:c.729C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.729C>A
  hgvsp: ENST00000393844.1:c.729C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro243Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

6-44198590-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198590
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198590
    reference: chr 6
allele count: 7
allele frequency: 5.770435585451908e-5
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.730G>A
  hgvsp: ENSP00000360789.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.730G>A
  hgvsp: ENSP00000360773.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.730G>A
  hgvsp: ENSP00000360796.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.730G>A
  hgvsp: ENSP00000377424.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.919G>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.967G>A
  hgvsp: ENSP00000319152.6:p.Gly323Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.730G>A
  hgvsp: ENSP00000377427.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.730G>A
  hgvsp: ENSP00000392668.2:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.730G>A
  hgvsp: ENSP00000360820.3:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.730G>A
  hgvsp: ENSP00000360805.5:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.730G>A
  hgvsp: ENSP00000360778.1:p.Gly244Arg
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly244Arg
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

6-44198601-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198601
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198601
    reference: chr 6
allele count: 7
allele frequency: 5.771862992463596e-5
allele num: 121278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.978G>T
  hgvsp: ENSP00000319152.6:p.Glu326Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.930G>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.741G>T
  hgvsp: ENSP00000360778.1:p.Glu247Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.741G>T
  hgvsp: ENSP00000377427.1:p.Glu247Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.741G>T
  hgvsp: ENSP00000392668.2:p.Glu247Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.741G>T
  hgvsp: ENSP00000360773.1:p.Glu247Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.741G>T
  hgvsp: ENSP00000377424.1:p.Glu247Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.741G>T
  hgvsp: ENSP00000360789.1:p.Glu247Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.741G>T
  hgvsp: ENSP00000360820.3:p.Glu247Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.741G>T
  hgvsp: ENSP00000360796.1:p.Glu247Asp
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.741G>T
  hgvsp: ENSP00000360805.5:p.Glu247Asp
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu247Asp
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/6-44198603-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198603
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198603
    reference: chr 6
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.980C>A
  hgvsp: ENSP00000319152.6:p.Thr327Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.743C>A
  hgvsp: ENSP00000360789.1:p.Thr248Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.743C>A
  hgvsp: ENSP00000360773.1:p.Thr248Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.932C>A
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.743C>A
  hgvsp: ENSP00000360796.1:p.Thr248Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.743C>A
  hgvsp: ENSP00000360805.5:p.Thr248Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.743C>A
  hgvsp: ENSP00000360778.1:p.Thr248Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.743C>A
  hgvsp: ENSP00000377427.1:p.Thr248Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.743C>A
  hgvsp: ENSP00000360820.3:p.Thr248Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.743C>A
  hgvsp: ENSP00000377424.1:p.Thr248Asn
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.743C>A
  hgvsp: ENSP00000392668.2:p.Thr248Asn
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr248Asn
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

6-44198613-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198613
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198613
    reference: chr 6
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.942C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.753C>T
  hgvsp: ENST00000371708.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.753C>T
  hgvsp: ENST00000371731.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.753C>T
  hgvsp: ENST00000393841.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.990C>T
  hgvsp: ENST00000313248.7:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.753C>T
  hgvsp: ENST00000427851.2:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.753C>T
  hgvsp: ENST00000371755.3:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.753C>T
  hgvsp: ENST00000393844.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.753C>T
  hgvsp: ENST00000371724.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.753C>T
  hgvsp: ENST00000371740.5:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.753C>T
  hgvsp: ENST00000371713.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6341
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp251Asp
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

6-44198616-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198616
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198616
    reference: chr 6
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.756C>T
  hgvsp: ENST00000371755.3:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.993C>T
  hgvsp: ENST00000313248.7:c.993C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.756C>T
  hgvsp: ENST00000371713.1:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.756C>T
  hgvsp: ENST00000393844.1:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.756C>T
  hgvsp: ENST00000371731.1:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.756C>T
  hgvsp: ENST00000371708.1:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.756C>T
  hgvsp: ENST00000371724.1:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.756C>T
  hgvsp: ENST00000371740.5:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.756C>T
  hgvsp: ENST00000427851.2:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.945C>T
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.756C>T
  hgvsp: ENST00000393841.1:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu252Leu
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

6-44198619-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 44198619
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 44198619
    reference: chr 6
allele count: 1
allele frequency: 8.251097395953662e-6
allele num: 121196
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360796
  ensembl transcript: ENST00000371731
  gene symbol: SLC29A1
  hgvsc: ENST00000371731.1:c.759T>C
  hgvsp: ENST00000371731.1:c.759T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360805
  ensembl transcript: ENST00000371740
  gene symbol: SLC29A1
  hgvsc: ENST00000371740.5:c.759T>C
  hgvsp: ENST00000371740.5:c.759T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360789
  ensembl transcript: ENST00000371724
  gene symbol: SLC29A1
  hgvsc: ENST00000371724.1:c.759T>C
  hgvsp: ENST00000371724.1:c.759T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000112759
  ensembl transcript: ENST00000472176
  gene symbol: SLC29A1
  hgvsc: ENST00000472176.1:n.948T>C
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360820
  ensembl transcript: ENST00000371755
  gene symbol: SLC29A1
  hgvsc: ENST00000371755.3:c.759T>C
  hgvsp: ENST00000371755.3:c.759T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377427
  ensembl transcript: ENST00000393844
  gene symbol: SLC29A1
  hgvsc: ENST00000393844.1:c.759T>C
  hgvsp: ENST00000393844.1:c.759T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360773
  ensembl transcript: ENST00000371708
  gene symbol: SLC29A1
  hgvsc: ENST00000371708.1:c.759T>C
  hgvsp: ENST00000371708.1:c.759T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000319152
  ensembl transcript: ENST00000313248
  gene symbol: SLC29A1
  hgvsc: ENST00000313248.7:c.996T>C
  hgvsp: ENST00000313248.7:c.996T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000360778
  ensembl transcript: ENST00000371713
  gene symbol: SLC29A1
  hgvsc: ENST00000371713.1:c.759T>C
  hgvsp: ENST00000371713.1:c.759T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000377424
  ensembl transcript: ENST00000393841
  gene symbol: SLC29A1
  hgvsc: ENST00000393841.1:c.759T>C
  hgvsp: ENST00000393841.1:c.759T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112759
  ensembl protein: ENSP00000392668
  ensembl transcript: ENST00000427851
  gene symbol: SLC29A1
  hgvsc: ENST00000427851.2:c.759T>C
  hgvsp: ENST00000427851.2:c.759T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11003
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile253Ile
num of homozygotes: 0
reference allele: T

GenotypeDepth
all individuals: 137
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3512
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31003
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11535
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3831
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6260
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

QD
type: SiteQuality
SIO_000300: 1.398e1

DP
type: SiteQuality
SIO_000300: 1.984519e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.632e0

FS
type: SiteQuality
SIO_000300: 1.047e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.488e0

MQ
type: SiteQuality
SIO_000300: 5.805e1

GenotypeDepth
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31012
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6263
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11534
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3829
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997601918465228e-5
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-3

DP
type: SiteQuality
SIO_000300: 1.984702e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.25e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

QD
type: SiteQuality
SIO_000300: 1.32e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.72e-1

GenotypeDepth
all individuals: 220
bin: 7.75e1
variant carriers: 59

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3482
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30846
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6594
bin: 9.75e1
variant carriers: 786

GenotypeQuality
all individuals: 3794
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11477
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 225
allele frequency: 3.372403249497887e-3
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 39
allele frequency: 3.36962156557802e-3
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.728181468665898e-4
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 5.506607929515419e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 506
allele frequency: 3.064437984496124e-2
allele num: 16512
num of homozygotes: 4

East Asian
type: Population
allele count: 8
allele frequency: 9.244280101687081e-4
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: 3.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.38e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

DP
type: SiteQuality
SIO_000300: 1.99826e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.391e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

GenotypeDepth
all individuals: 5359
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3847
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3537
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11620
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5942
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31250
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1053
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728309713100588e-4
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.78e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.46e-1

DP
type: SiteQuality
SIO_000300: 1.976653e6

FS
type: SiteQuality
SIO_000300: 3.927e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.011e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.06e-1

GenotypeDepth
all individuals: 1499
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31251
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3850
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1053
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11616
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3535
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5940
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.993e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.825e0

QD
type: SiteQuality
SIO_000300: 1.29e1

MQ
type: SiteQuality
SIO_000300: 5.92e1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

DP
type: SiteQuality
SIO_000300: 1.976478e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.744e-1

FS
type: SiteQuality
SIO_000300: 4.123e0

GenotypeDepth
all individuals: 260
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3532
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3842
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5937
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31226
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

DP
type: SiteQuality
SIO_000300: 1.976297e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.328e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

QD
type: SiteQuality
SIO_000300: 1.901e1

GenotypeDepth
all individuals: 5388
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3531
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5939
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11597
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31250
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3840
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.299e0

MQ
type: SiteQuality
SIO_000300: 5.885e1

QD
type: SiteQuality
SIO_000300: 1.062e1

DP
type: SiteQuality
SIO_000300: 1.976079e6

VQSLOD
type: SiteQuality
SIO_000300: -5.332e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 2.172e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.628e0

GenotypeDepth
all individuals: 59
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31270
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3831
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5924
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3516
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2173
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.18e-1

QD
type: SiteQuality
SIO_000300: 1.037e1

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 1.974536e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 5.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeDepth
all individuals: 258
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3833
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2165
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3518
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11591
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5934
bin: 9.75e1
variant carriers: 45

GenotypeQuality
all individuals: 31301
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 43
allele frequency: 6.444264604501994e-4
allele num: 66726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.975039e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

QD
type: SiteQuality
SIO_000300: 1.3e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.68e0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

FS
type: SiteQuality
SIO_000300: 5.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeDepth
all individuals: 19166
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3832
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5903
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 11594
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2165
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3520
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31341
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.991e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.55e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

VQSLOD
type: SiteQuality
SIO_000300: 4.67e-1

DP
type: SiteQuality
SIO_000300: 1.973541e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.138e1

GenotypeDepth
all individuals: 58
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11591
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5897
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3832
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31351
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3517
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -9.59e-1

FS
type: SiteQuality
SIO_000300: 5.157e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.011e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.303e0

DP
type: SiteQuality
SIO_000300: 1.973154e6

QD
type: SiteQuality
SIO_000300: 1.526e1

VQSLOD
type: SiteQuality
SIO_000300: -2.45e-2

GenotypeDepth
all individuals: 257
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3825
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5893
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31353
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3518
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11581
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.85e1

FS
type: SiteQuality
SIO_000300: 1.032e0

QD
type: SiteQuality
SIO_000300: 1.349e1

VQSLOD
type: SiteQuality
SIO_000300: -1.263e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-2

DP
type: SiteQuality
SIO_000300: 1.972957e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.122e0

GenotypeDepth
all individuals: 141
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3824
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3517
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5893
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11586
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31365
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.317e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.58e-1

FS
type: SiteQuality
SIO_000300: 1.905e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.27e0

MQRankSum
type: SiteQuality
SIO_000300: 9.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.3e-1

DP
type: SiteQuality
SIO_000300: 1.972831e6

GenotypeDepth
all individuals: 1432
bin: 4.75e1
variant carriers: 161

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11528
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3772
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6373
bin: 9.75e1
variant carriers: 2300

GenotypeQuality
all individuals: 2096
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31224
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 43
allele frequency: 4.134615384615385e-3
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 251
allele frequency: 1.520290732889158e-2
allele num: 16510
num of homozygotes: 1

East Asian
type: Population
allele count: 3
allele frequency: 3.466605038132656e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 137
allele frequency: 2.071990320629159e-2
allele num: 6612
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 1724
allele frequency: 2.583623066778564e-2
allele num: 66728
num of homozygotes: 21

Latino
type: Population
allele count: 154
allele frequency: 1.331719128329298e-2
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 15
allele frequency: 1.651982378854626e-2
allele num: 908
num of homozygotes: 2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.86e0

QD
type: SiteQuality
SIO_000300: 1.357e1

DP
type: SiteQuality
SIO_000300: 2.006182e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeDepth
all individuals: 208
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32420
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11976
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3913
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3594
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2185
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.86e-1

QD
type: SiteQuality
SIO_000300: 1.273e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.921e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
SIO_000300: 1.921471e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 7.044e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

GenotypeDepth
all individuals: 207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1155
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3575
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32286
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11947
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3908
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4285
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.77e0

FS
type: SiteQuality
SIO_000300: 1.511e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.8e-1

DP
type: SiteQuality
SIO_000300: 1.918663e6

QD
type: SiteQuality
SIO_000300: 1.169e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

VQSLOD
type: SiteQuality
SIO_000300: 3.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.06e-1

GenotypeDepth
all individuals: 326
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3901
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11929
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4283
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2169
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3572
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32246
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.99e-1

QD
type: SiteQuality
SIO_000300: 1.388e1

FS
type: SiteQuality
SIO_000300: 6.62e-1

MQ
type: SiteQuality
SIO_000300: 5.893e1

DP
type: SiteQuality
SIO_000300: 1.917791e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: -3.082e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.7e-2

GenotypeDepth
all individuals: 23
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3531
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11791
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3855
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31937
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4249
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 17
allele frequency: 1.472881649627448e-3
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

FS
type: SiteQuality
SIO_000300: 5.570000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.181e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.246e1

DP
type: SiteQuality
SIO_000300: 1.908935e6

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

GenotypeDepth
all individuals: 22
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3531
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3855
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4249
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 31937
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11791
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732801940738174e-4
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.246e1

DP
type: SiteQuality
SIO_000300: 1.908935e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.181e0

MQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

FS
type: SiteQuality
SIO_000300: 5.570000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

GenotypeDepth
all individuals: 5448
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11641
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2127
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31657
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3491
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3826
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4226
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002191599867904e-5
allele num: 66618
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

FS
type: SiteQuality
SIO_000300: 6.373e0

MQRankSum
type: SiteQuality
SIO_000300: -1.002e0

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e0

QD
type: SiteQuality
SIO_000300: 1.15e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.903056e6

GenotypeDepth
all individuals: 1293
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3796
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31860
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4212
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 176
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2106
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1130
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3464
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11578
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50154659299078e-5
allele num: 66598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.86e-1

DP
type: SiteQuality
SIO_000300: 1.901059e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.415e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.428e1

MQ
type: SiteQuality
SIO_000300: 5.857e1

VQSLOD
type: SiteQuality
SIO_000300: -1.052e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

FS
type: SiteQuality
SIO_000300: 2.908e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.79e-1

GenotypeDepth
all individuals: 117
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11578
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3798
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3461
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4211
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31872
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2108
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.344e1

DP
type: SiteQuality
SIO_000300: 1.899086e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 8.56e-1

MQ
type: SiteQuality
SIO_000300: 5.876e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.134e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.429999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.404e0

GenotypeDepth
all individuals: 2578
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31724
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11542
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4202
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3777
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3427
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501862309263487e-5
allele num: 66584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.588e0

DP
type: SiteQuality
SIO_000300: 1.895087e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.903e1

FS
type: SiteQuality
SIO_000300: 1.547e0

QD
type: SiteQuality
SIO_000300: 1.061e1

VQSLOD
type: SiteQuality
SIO_000300: -1.212e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

GenotypeDepth
all individuals: 205
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 463
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11430
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3715
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3361
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1093
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2039
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1284
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31108
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4182
bin: 9.75e1
variant carriers: 8

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 7.730962504831851e-4
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.429e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

FS
type: SiteQuality
SIO_000300: 1.237e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.878878e6

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

QD
type: SiteQuality
SIO_000300: 1.436e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

GenotypeDepth
all individuals: 23
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2001
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1219
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2661
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3557
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4165
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10606
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28014
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3258
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506114826194349e-5
allele num: 66396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.82544e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.112e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.84e-1

QD
type: SiteQuality
SIO_000300: 1.497e1

MQRankSum
type: SiteQuality
SIO_000300: -1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.07e-1

GenotypeQuality
all individuals: 2832
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5192
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2758
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4152
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 16383
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3539
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1849
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1978
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3166
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2277
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10050
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.069453356555749e-4
allele num: 65454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.95e-1

QD
type: SiteQuality
SIO_000300: 1.507e1

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.67191e6

FS
type: SiteQuality
SIO_000300: 5.019e0

MQRankSum
type: SiteQuality
SIO_000300: -1.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.72e-1

GenotypeQuality
all individuals: 1203
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3500
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4150
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 213
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1860
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5392
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2755
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7085
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2738
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21331
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522209029743965e-5
allele num: 65694
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.81e-1

QD
type: SiteQuality
SIO_000300: 2.007e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.272e0

VQSLOD
type: SiteQuality
SIO_000300: -1.938e0

DP
type: SiteQuality
SIO_000300: 1.665818e6

MQ
type: SiteQuality
SIO_000300: 5.939e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.178e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

GenotypeQuality
all individuals: 411
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3758
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1767
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4114
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1814
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5630
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17062
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4125
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2557
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2627
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6376
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64110
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11100
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.204819277108434e-4
allele num: 8300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16150
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.56e0

MQRankSum
type: SiteQuality
SIO_000300: -4.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.476e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

DP
type: SiteQuality
SIO_000300: 1.628553e6

VQSLOD
type: SiteQuality
SIO_000300: 8.89e-1

GenotypeQuality
all individuals: 575
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3979
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2533
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2551
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5501
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1626
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5739
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4440
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2410
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4129
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1020
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3931
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1780
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13713
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.050861361771944e-4
allele num: 9752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.396e0

DP
type: SiteQuality
SIO_000300: 1.602866e6

VQSLOD
type: SiteQuality
SIO_000300: -5.125e0

QD
type: SiteQuality
SIO_000300: 1.544e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.13e-1

FS
type: SiteQuality
SIO_000300: 3.0038e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

GenotypeQuality
all individuals: 347
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5560
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4096
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4161
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 184
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5864
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3968
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2018
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14102
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4513
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2608
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2508
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11206
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.139489194499017e-5
allele num: 16288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8304
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

VQSLOD
type: SiteQuality
SIO_000300: -5.752e0

FS
type: SiteQuality
SIO_000300: 6.2336e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.263e0

MQ
type: SiteQuality
SIO_000300: 5.924e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.81e0

DP
type: SiteQuality
SIO_000300: 1.582659e6

GenotypeQuality
all individuals: 1107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 552
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14102
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2018
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 513
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2181
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4513
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4096
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1816
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4161
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 5864
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 9.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9702
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.069744597249509e-4
allele num: 16288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.408477842003854e-4
allele num: 8304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.089528078695057e-4
allele num: 64248
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.752e0

QD
type: SiteQuality
SIO_000300: 2.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.263e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.81e0

MQ
type: SiteQuality
SIO_000300: 5.924e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

FS
type: SiteQuality
SIO_000300: 6.2336e1

DP
type: SiteQuality
SIO_000300: 1.582659e6

GenotypeQuality
all individuals: 807
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1402
bin: 7.5e0
variant carriers: 7

GenotypeQuality
all individuals: 4368
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3631
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3779
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1217
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2696
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10569
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2351
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5006
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4026
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2145
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1559
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1568
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4009
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2093
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2417
bin: 4.25e1
variant carriers: 7

GenotypeQuality
all individuals: 1461
bin: 5.75e1
variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.334757074212493e-4
allele num: 7492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.200704225352113e-4
allele num: 9088
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 5.005005005005005e-4
allele num: 9990
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 4.16470503023938e-4
allele num: 55226
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.411432604093155e-4
allele num: 14170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5910
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.591749e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.735e0

VQSLOD
type: SiteQuality
SIO_000300: -3.459e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.11e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 8.6264e1

QD
type: SiteQuality
SIO_000300: 9.7e-1

GenotypeQuality
all individuals: 3681
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6444
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5326
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3996
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13613
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2097
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1743
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2106
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4274
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3041
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3072
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4366
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2288
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.349872218413016e-5
allele num: 64172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9684
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11232
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16308
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.083e1

FS
type: SiteQuality
SIO_000300: 5.98e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.581449e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
all individuals: 4223
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1083
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2334
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2790
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2772
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3599
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1563
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3938
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13139
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1934
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2289
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5597
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4267
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 867
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.774181616423155e-4
allele num: 10814
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.520605112154408e-5
allele num: 15336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.817075166072188e-5
allele num: 61118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6356
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.061345786457228e-4
allele num: 9422
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.572649e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.367e0

FS
type: SiteQuality
SIO_000300: 5.9172e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.78e1

MQRankSum
type: SiteQuality
SIO_000300: -3.82e-1

QD
type: SiteQuality
SIO_000300: 2.89e0

MQ
type: SiteQuality
SIO_000300: 5.886e1

GenotypeQuality
all individuals: 8694
bin: 6.25e1
variant carriers: 6

GenotypeQuality
all individuals: 3568
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2057
bin: 4.25e1
variant carriers: 14

GenotypeQuality
all individuals: 3046
bin: 2.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3988
bin: 2.25e1
variant carriers: 12

GenotypeQuality
all individuals: 1685
bin: 1.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1691
bin: 1.75e1
variant carriers: 11

GenotypeQuality
all individuals: 12167
bin: 2.5e0
variant carriers: 7

GenotypeQuality
all individuals: 1710
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 1436
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2986
bin: 3.75e1
variant carriers: 8

GenotypeQuality
all individuals: 758
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1935
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1614
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1832
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 879
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3892
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1264
bin: 5.75e1
variant carriers: 5

Latino
type: Population
allele count: 9
allele frequency: 1.070154577883472e-3
allele num: 8410
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 1.051340459085334e-3
allele num: 11414
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.613964933866503e-4
allele num: 6502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 5.584512285927029e-4
allele num: 5372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 68
allele frequency: 1.509232954545455e-3
allele num: 45056
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.629324945560126e-4
allele num: 8266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.31e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.177e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.67e-1

FS
type: SiteQuality
SIO_000300: 1.34511e2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.147e0

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

DP
type: SiteQuality
SIO_000300: 1.624309e6

GenotypeQuality
all individuals: 233
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3227
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2861
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3554
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7246
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1989
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2681
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1683
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3833
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1241
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13798
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6656
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2466
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64484
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.032844453625284e-4
allele num: 9682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.95e-1

DP
type: SiteQuality
SIO_000300: 1.67297e6

MQRankSum
type: SiteQuality
SIO_000300: -1.075e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.114e0

FS
type: SiteQuality
SIO_000300: 1.352e0

QD
type: SiteQuality
SIO_000300: 1.135e1

GenotypeQuality
all individuals: 136
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1435
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2574
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3463
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7369
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2744
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1647
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2355
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4467
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3889
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1684
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14376
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.844861135680169e-5
allele num: 11306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.943e0

FS
type: SiteQuality
SIO_000300: 1.822e0

QD
type: SiteQuality
SIO_000300: 1.172e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

DP
type: SiteQuality
SIO_000300: 1.674158e6

VQSLOD
type: SiteQuality
SIO_000300: 2.53e-1

GenotypeQuality
all individuals: 1523
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5886
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12050
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1976
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2589
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 862
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 755
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3194
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2847
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2637
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 844
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2932
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3539
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1589
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2618
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3460
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2277
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.538725602380096e-5
allele num: 61174
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.269357705001269e-4
allele num: 7878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.21e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.131e0

DP
type: SiteQuality
SIO_000300: 1.678661e6

VQSLOD
type: SiteQuality
SIO_000300: -1.029e2

FS
type: SiteQuality
SIO_000300: 1.48456e2

MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.209e0

QD
type: SiteQuality
SIO_000300: 1.5e-1

GenotypeQuality
all individuals: 152
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2109
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1573
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1903
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7622
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3503
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4027
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2394
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1793
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2872
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7005
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 14560
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4704
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1419
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2253
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.218175173589962e-4
allele num: 16418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.095e1

MQRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-1

DP
type: SiteQuality
SIO_000300: 1.701287e6

GenotypeQuality
all individuals: 28669
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4388
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8435
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4213
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2308
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3816
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2751
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5065
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.622564e6

QD
type: SiteQuality
SIO_000300: 1.478e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.06e-1

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8460
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2753
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4384
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5054
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28668
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3815
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2308
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4216
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499235130027895e-5
allele num: 66678
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.08e-1

QD
type: SiteQuality
SIO_000300: 1.337e1

FS
type: SiteQuality
SIO_000300: 2.8403e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.833e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.993e0

DP
type: SiteQuality
SIO_000300: 2.623229e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.07e-1

GenotypeQuality
all individuals: 124
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2752
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5093
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4393
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8613
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28670
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3819
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4227
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.27e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.3e-1

DP
type: SiteQuality
SIO_000300: 2.624665e6

MQRankSum
type: SiteQuality
SIO_000300: -5.649999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.544e1

FS
type: SiteQuality
SIO_000300: 3.739e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8722
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28639
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2741
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4213
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5086
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3801
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.509e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

FS
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

DP
type: SiteQuality
SIO_000300: 2.627565e6

MQRankSum
type: SiteQuality
SIO_000300: -7.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.62e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

GenotypeQuality
all individuals: 103
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4379
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5093
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28640
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8761
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3800
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4216
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2740
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500870504892838e-5
allele num: 66628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.012e0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

FS
type: SiteQuality
SIO_000300: 1.2073e1

VQSLOD
type: SiteQuality
SIO_000300: -3.294e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e0

MQ
type: SiteQuality
SIO_000300: 6.14e1

QD
type: SiteQuality
SIO_000300: 9.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

DP
type: SiteQuality
SIO_000300: 2.627711e6

GenotypeQuality
all individuals: 54
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3800
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4216
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8761
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5093
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4379
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2740
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28640
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.936406995230525e-5
allele num: 10064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.2073e1

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

DP
type: SiteQuality
SIO_000300: 2.627711e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.012e0

QD
type: SiteQuality
SIO_000300: 9.09e0

MQ
type: SiteQuality
SIO_000300: 6.14e1

VQSLOD
type: SiteQuality
SIO_000300: -3.294e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8944
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2747
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28640
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3800
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5123
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4390
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4218
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.941230911614993e-4
allele num: 8644
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.196e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.02e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-3

DP
type: SiteQuality
SIO_000300: 2.627394e6

QD
type: SiteQuality
SIO_000300: 1.659e1

VQSLOD
type: SiteQuality
SIO_000300: 3.87e0

GenotypeQuality
all individuals: 28646
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 2311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3799
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4218
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2747
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4391
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8985
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.182732111176819e-3
allele num: 10146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.592464569650881e-4
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 2.627411e6

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

QD
type: SiteQuality
SIO_000300: 1.485e1

VQSLOD
type: SiteQuality
SIO_000300: 5.02e0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4391
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3799
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28646
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2747
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8985
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5131
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4218
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2311
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.02e0

DP
type: SiteQuality
SIO_000300: 2.627411e6

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

QD
type: SiteQuality
SIO_000300: 1.485e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5139
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9045
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28638
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2756
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3802
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.33e0

MQ
type: SiteQuality
SIO_000300: 5.909e1

DP
type: SiteQuality
SIO_000300: 2.62721e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.585e0

QD
type: SiteQuality
SIO_000300: 1.74e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.351e0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4179
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4359
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2737
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2290
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8992
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3767
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28893
bin: 9.75e1
variant carriers: 666

European (Non-Finnish)
type: Population
allele count: 556
allele frequency: 8.336582001379435e-3
allele num: 66694
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 18
allele frequency: 1.555478741790529e-3
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 1.675206937327552e-3
allele num: 10148
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 26
allele frequency: 3.931055337163592e-3
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 50
allele frequency: 3.028100775193799e-3
allele num: 16512
num of homozygotes: 1

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.95e0

DP
type: SiteQuality
SIO_000300: 2.65078e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e-1

QD
type: SiteQuality
SIO_000300: 1.209e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

GenotypeQuality
all individuals: 3793
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9077
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28586
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5168
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4401
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2759
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4226
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

VQSLOD
type: SiteQuality
SIO_000300: 5.629999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.271e1

FS
type: SiteQuality
SIO_000300: 1.84e0

DP
type: SiteQuality
SIO_000300: 2.629327e6

MQ
type: SiteQuality
SIO_000300: 5.914e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeDepth
all individuals: 1091
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4398
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28587
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9103
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4225
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5171
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2761
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e0

QD
type: SiteQuality
SIO_000300: 1.2e1

VQSLOD
type: SiteQuality
SIO_000300: 6.899999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.935e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.62966e6

GenotypeDepth
all individuals: 7562
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3551
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4959
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4401
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2758
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4225
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28586
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 5171
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9200
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.813542688910697e-5
allele num: 10190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

VQSLOD
type: SiteQuality
SIO_000300: 6.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.78e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.453e1

DP
type: SiteQuality
SIO_000300: 2.630614e6

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.581e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeDepth
all individuals: 544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28587
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2762
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5180
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4402
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9249
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997512064986062e-5
allele num: 66722
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.782821365681862e-5
allele num: 10222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.631477e6

FS
type: SiteQuality
SIO_000300: 3.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

QD
type: SiteQuality
SIO_000300: 1.249e1

VQSLOD
type: SiteQuality
SIO_000300: 8.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

MQ
type: SiteQuality
SIO_000300: 5.942e1

GenotypeDepth
all individuals: 544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2760
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5179
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9252
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28586
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4403
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997512064986062e-5
allele num: 66722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.384e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.631761e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

MQRankSum
type: SiteQuality
SIO_000300: 9.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.104e0

VQSLOD
type: SiteQuality
SIO_000300: 5.72e-1

FS
type: SiteQuality
SIO_000300: 1.925e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeDepth
all individuals: 242
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5181
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2760
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28584
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9279
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4404
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.53e0

MQRankSum
type: SiteQuality
SIO_000300: 5.08e-1

QD
type: SiteQuality
SIO_000300: 1.386e1

DP
type: SiteQuality
SIO_000300: 2.631713e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e-1

FS
type: SiteQuality
SIO_000300: 2.244e0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.21e-1

GenotypeDepth
all individuals: 3470
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2761
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9310
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28584
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5179
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4403
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.62e-1

QD
type: SiteQuality
SIO_000300: 6.18e0

DP
type: SiteQuality
SIO_000300: 2.631991e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.76e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

VQSLOD
type: SiteQuality
SIO_000300: -9.009e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9320
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28584
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2761
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5180
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4404
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.676e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.13e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

DP
type: SiteQuality
SIO_000300: 2.632295e6

VQSLOD
type: SiteQuality
SIO_000300: -8.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

GenotypeDepth
all individuals: 544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5183
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4402
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28582
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2756
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9321
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4223
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3795
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

VQSLOD
type: SiteQuality
SIO_000300: 3.57e0

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

QD
type: SiteQuality
SIO_000300: 1.141e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.37e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.632553e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.02e-1

GenotypeDepth
all individuals: 242
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4402
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5181
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4223
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9331
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2756
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28582
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.942e1

VQSLOD
type: SiteQuality
SIO_000300: 5.590000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

DP
type: SiteQuality
SIO_000300: 2.632474e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.7e0

FS
type: SiteQuality
SIO_000300: 2.558e0

QD
type: SiteQuality
SIO_000300: 1.275e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

GenotypeDepth
all individuals: 10043
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5184
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4400
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2756
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9319
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28581
bin: 9.75e1
variant carriers: 6

African
type: Population
allele count: 1
allele frequency: 9.67305088024763e-5
allele num: 10338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496402877697842e-5
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.960000000000001e0

DP
type: SiteQuality
SIO_000300: 2.632982e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.1e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 2.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

GenotypeDepth
all individuals: 1092
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9319
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5184
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28581
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 67
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2756
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4400
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.632982e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 9.960000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

GenotypeDepth
all individuals: 1008
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2315
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4402
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28580
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9324
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5182
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.494004796163069e-5
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.4e-2

FS
type: SiteQuality
SIO_000300: 5.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

DP
type: SiteQuality
SIO_000300: 2.633118e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.294e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

GenotypeDepth
all individuals: 1618
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5181
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9272
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28578
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3791
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.995502248875562e-5
allele num: 66700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.309e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
SIO_000300: 3.03e0

QD
type: SiteQuality
SIO_000300: 8.800000000000001e0

DP
type: SiteQuality
SIO_000300: 2.632399e6

GenotypeDepth
all individuals: 383
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28576
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5181
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3792
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2754
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9289
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.588e0

FS
type: SiteQuality
SIO_000300: 2.67e0

DP
type: SiteQuality
SIO_000300: 2.631802e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.202e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.03e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 1.341e1

VQSLOD
type: SiteQuality
SIO_000300: -3.12e-1

GenotypeDepth
all individuals: 759
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2315
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28575
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 144
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5174
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4391
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3792
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9246
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2748
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.691800736576855e-5
allele num: 10318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.511e0

VQSLOD
type: SiteQuality
SIO_000300: -2.742e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.631012e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.264e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.035e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.01e0

GenotypeDepth
all individuals: 759
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9214
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3791
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2745
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4389
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5177
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28574
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.921e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.486e0

VQSLOD
type: SiteQuality
SIO_000300: -3.772e0

DP
type: SiteQuality
SIO_000300: 2.630668e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.911e0

FS
type: SiteQuality
SIO_000300: 8.657999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -2.626e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 1.086e1

GenotypeDepth
all individuals: 543
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3790
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28572
bin: 9.75e1
variant carriers: 1