1-155149557-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149557
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149557
    reference: chr 1
allele count: 2
allele frequency: 1.648994937585542e-5
allele num: 121286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.744+6G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3607C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1052+6G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.791+6G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.813+6G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.834+6G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.813+6G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.813+6G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.435+6G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.880+6G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.813+6G>A
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36807
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.813+6G>A
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/1-155149558-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149558
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149559
    reference: chr 1
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.791+13dupC
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.880+13dupC
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.744+13dupC
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.834+13dupC
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.813+13dupC
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.435+13dupC
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.813+13dupC
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1052+13dupC
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3609dupG
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.813+13dupC
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.813+13dupC
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36806
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.813+13dupC
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

1-155149559-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149559
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149559
    reference: chr 1
allele count: 3
allele frequency: 2.474185992808366e-5
allele num: 121252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1052+8C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.791+8C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.744+8C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.813+8C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.813+8C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.813+8C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.813+8C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.880+8C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3609G>A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.834+8C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.435+8C>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36806
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: c.813+8C>T
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-155149564-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149564
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149564
    reference: chr 1
allele count: 2
allele frequency: 1.648994937585542e-5
allele num: 121286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.813+13C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1052+13C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.813+13C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.791+13C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.435+13C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.813+13C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3614G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.880+13C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.813+13C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.744+13C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.834+13C>G
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36806
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum

1-155149564-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149564
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149564
    reference: chr 1
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.834+13C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.813+13C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.813+13C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.880+13C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3614G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.435+13C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1052+13C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.813+13C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.791+13C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.813+13C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.744+13C>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36806
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

1-155149585-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149585
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149585
    reference: chr 1
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.791+34C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.813+34C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.813+34C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.880+34C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.744+34C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.834+34C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.813+34C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1052+34C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.435+34C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.813+34C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3635G>A
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36805
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-155149597-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149597
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149597
    reference: chr 1
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.834+46C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.813+46C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.813+46C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.813+46C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.813+46C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.791+46C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1052+46C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3647G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.435+46C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.880+46C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.744+46C>A
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36805
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

1-155149621-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149621
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149621
    reference: chr 1
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.436-50C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3671G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.881-50C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.814-50C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.792-50C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1053-50C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.814-50C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.835-50C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.814-50C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.814-50C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.745-50C>G
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3715
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27371
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4489
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

1-155149641-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149641
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149641
    reference: chr 1
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3691G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1053-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.814-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.814-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.745-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.814-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.835-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.814-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.881-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.436-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.792-30C>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27371
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4393
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

1-155149647-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149647
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149647
    reference: chr 1
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.814-24G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.835-24G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1053-24G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.814-24G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.881-24G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3697C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.814-24G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.792-24G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.436-24G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.814-24G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.745-24G>A
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27371
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

1-155149648-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149648
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149648
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.436-23C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.745-23C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.835-23C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.881-23C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.814-23C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.792-23C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3698G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.814-23C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.814-23C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1053-23C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.814-23C>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27371
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-155149665-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149665
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149665
    reference: chr 1
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.792-6C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.814-6C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3715G>C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.436-6C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.814-6C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.835-6C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1053-6C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.745-6C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.881-6C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.814-6C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.814-6C>G
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27371
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.814-6C>G
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

1-155149666-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149666
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149666
    reference: chr 1
allele count: 3
allele frequency: 2.471251112063001e-5
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3716G>C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.436-5C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.814-5C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.814-5C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.814-5C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.745-5C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.792-5C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.814-5C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.881-5C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.835-5C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1053-5C>G
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27371
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.814-5C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

1-155149666-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149666
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149666
    reference: chr 1
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.835-5C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.814-5C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.792-5C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.814-5C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.814-5C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.436-5C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3716G>A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.814-5C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1053-5C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.881-5C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.745-5C>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27371
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.814-5C>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-155149677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149677
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149677
    reference: chr 1
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.442C>T
  hgvsp: ENST00000545012.1:c.442C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.820C>T
  hgvsp: ENST00000368385.4:c.820C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.751C>T
  hgvsp: ENST00000368382.1:c.751C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.887C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3727G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1059C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.798C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.820C>T
  hgvsp: ENST00000368383.3:c.820C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.841C>T
  hgvsp: ENST00000543729.1:c.841C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.820C>T
  hgvsp: ENST00000334634.4:c.820C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.820C>T
  hgvsp: ENST00000392451.2:c.820C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27370
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu274Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

1-155149688-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149688
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149688
    reference: chr 1
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.852C>G
  hgvsp: ENSP00000442719.1:p.Ser284Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.831C>G
  hgvsp: ENSP00000376245.2:p.Ser277Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.809C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.762C>G
  hgvsp: ENSP00000357366.1:p.Ser254Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.831C>G
  hgvsp: ENSP00000357367.3:p.Ser277Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.453C>G
  hgvsp: ENSP00000440254.1:p.Ser151Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.831C>G
  hgvsp: ENSP00000357369.4:p.Ser277Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3738G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.898C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.831C>G
  hgvsp: ENSP00000334657.4:p.Ser277Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1070C>G
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27371
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser277Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP

1-155149695-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149695
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149695
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.838T>C
  hgvsp: ENSP00000376245.2:p.Tyr280His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.859T>C
  hgvsp: ENSP00000442719.1:p.Tyr287His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1077T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.769T>C
  hgvsp: ENSP00000357366.1:p.Tyr257His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.816T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.460T>C
  hgvsp: ENSP00000440254.1:p.Tyr154His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.838T>C
  hgvsp: ENSP00000334657.4:p.Tyr280His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.838T>C
  hgvsp: ENSP00000357369.4:p.Tyr280His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.838T>C
  hgvsp: ENSP00000357367.3:p.Tyr280His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3745A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.905T>C
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27371
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr280His
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

1-155149697-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149697
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149697
    reference: chr 1
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.907C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.840C>T
  hgvsp: ENST00000392451.2:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.840C>T
  hgvsp: ENST00000334634.4:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.861C>T
  hgvsp: ENST00000543729.1:c.861C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3747G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.462C>T
  hgvsp: ENST00000545012.1:c.462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.771C>T
  hgvsp: ENST00000368382.1:c.771C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.840C>T
  hgvsp: ENST00000368385.4:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1079C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.840C>T
  hgvsp: ENST00000368383.3:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.818C>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27370
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr280Tyr
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

1-155149709-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149709
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149709
    reference: chr 1
allele count: 3
allele frequency: 2.47137325974133e-5
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.830C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.873C>G
  hgvsp: ENSP00000442719.1:p.Asn291Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.783C>G
  hgvsp: ENSP00000357366.1:p.Asn261Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.852C>G
  hgvsp: ENSP00000334657.4:p.Asn284Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.852C>G
  hgvsp: ENSP00000376245.2:p.Asn284Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.852C>G
  hgvsp: ENSP00000357367.3:p.Asn284Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.474C>G
  hgvsp: ENSP00000440254.1:p.Asn158Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3759G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1091C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.919C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.852C>G
  hgvsp: ENSP00000357369.4:p.Asn284Lys
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27369
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn284Lys
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

1-155149716-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149716
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149716
    reference: chr 1
allele count: 4
allele frequency: 3.295218637756615e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.926A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.859A>T
  hgvsp: ENSP00000376245.2:p.Thr287Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.859A>T
  hgvsp: ENSP00000357367.3:p.Thr287Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.481A>T
  hgvsp: ENSP00000440254.1:p.Thr161Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.790A>T
  hgvsp: ENSP00000357366.1:p.Thr264Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.859A>T
  hgvsp: ENSP00000334657.4:p.Thr287Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.880A>T
  hgvsp: ENSP00000442719.1:p.Thr294Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.859A>T
  hgvsp: ENSP00000357369.4:p.Thr287Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.837A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3766T>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1098A>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27369
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr287Ser
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

1-155149717-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149717
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149717
    reference: chr 1
allele count: 13
allele frequency: 1.0709460572709e-4
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.881C>T
  hgvsp: ENSP00000442719.1:p.Thr294Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.860C>T
  hgvsp: ENSP00000357367.3:p.Thr287Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.860C>T
  hgvsp: ENSP00000334657.4:p.Thr287Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3767G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.482C>T
  hgvsp: ENSP00000440254.1:p.Thr161Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.860C>T
  hgvsp: ENSP00000376245.2:p.Thr287Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1099C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.838C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.791C>T
  hgvsp: ENSP00000357366.1:p.Thr264Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.927C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.860C>T
  hgvsp: ENSP00000357369.4:p.Thr287Met
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27378
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr287Met
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-155149717-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149717
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149717
    reference: chr 1
allele count: 22
allele frequency: 1.812370250766138e-4
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.860C>A
  hgvsp: ENSP00000376245.2:p.Thr287Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.482C>A
  hgvsp: ENSP00000440254.1:p.Thr161Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.860C>A
  hgvsp: ENSP00000357369.4:p.Thr287Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.791C>A
  hgvsp: ENSP00000357366.1:p.Thr264Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.881C>A
  hgvsp: ENSP00000442719.1:p.Thr294Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.860C>A
  hgvsp: ENSP00000334657.4:p.Thr287Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.927C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.860C>A
  hgvsp: ENSP00000357367.3:p.Thr287Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1099C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.838C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3767G>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27378
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr287Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum

1-155149718-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149718
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149718
    reference: chr 1
allele count: 51156
allele frequency: 4.215713744169565e-1
allele num: 121346
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.861G>A
  hgvsp: ENST00000334634.4:c.861G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.882G>A
  hgvsp: ENST00000543729.1:c.882G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.928G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1100G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.861G>A
  hgvsp: ENST00000368383.3:c.861G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.839G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.792G>A
  hgvsp: ENST00000368382.1:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.861G>A
  hgvsp: ENST00000392451.2:c.861G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3768C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.483G>A
  hgvsp: ENST00000545012.1:c.483G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.861G>A
  hgvsp: ENST00000368385.4:c.861G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 4.25e1
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 7.75e1
  variant carriers: 704
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.75e1
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 3.25e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 32712
  bin: 9.75e1
  variant carriers: 32456
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 5.25e1
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 3.75e1
  variant carriers: 150
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 6.25e1
  variant carriers: 268
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 8.25e1
  variant carriers: 964
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 2.75e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 2.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 4.75e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 6.75e1
  variant carriers: 362
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 9.25e1
  variant carriers: 1514
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 7.25e1
  variant carriers: 526
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 1189
genotype quality: GenotypeQuality
hgvs: p.Thr287Thr
num of homozygotes: 12011
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

1-155149724-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149724
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149724
    reference: chr 1
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.867G>C
  hgvsp: ENSP00000357367.3:p.Gln289His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.934G>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.888G>C
  hgvsp: ENSP00000442719.1:p.Gln296His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.798G>C
  hgvsp: ENSP00000357366.1:p.Gln266His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3774C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.845G>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.489G>C
  hgvsp: ENSP00000440254.1:p.Gln163His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.867G>C
  hgvsp: ENSP00000334657.4:p.Gln289His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.867G>C
  hgvsp: ENSP00000376245.2:p.Gln289His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1106G>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.867G>C
  hgvsp: ENSP00000357369.4:p.Gln289His
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5095
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gln289His
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

1-155149752-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149752
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149752
    reference: chr 1
allele count: 4
allele frequency: 3.298153034300791e-5
allele num: 121280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.895G>A
  hgvsp: ENSP00000357369.4:p.Val299Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.517G>A
  hgvsp: ENSP00000440254.1:p.Val173Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.895G>A
  hgvsp: ENSP00000376245.2:p.Val299Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.895G>A
  hgvsp: ENSP00000334657.4:p.Val299Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.826G>A
  hgvsp: ENSP00000357366.1:p.Val276Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.873G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3802C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.916G>A
  hgvsp: ENSP00000442719.1:p.Val306Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.962G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.895G>A
  hgvsp: ENSP00000357367.3:p.Val299Met
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1134G>A
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5090
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val299Met
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD

1-155149762-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149762
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149762
    reference: chr 1
allele count: 6
allele frequency: 4.949514947535141e-5
allele num: 121224
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.905C>T
  hgvsp: ENSP00000334657.4:p.Thr302Ile
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1144C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.883C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.836C>T
  hgvsp: ENSP00000357366.1:p.Thr279Ile
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.972C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.926C>T
  hgvsp: ENSP00000442719.1:p.Thr309Ile
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3812G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.905C>T
  hgvsp: ENSP00000376245.2:p.Thr302Ile
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.527C>T
  hgvsp: ENSP00000440254.1:p.Thr176Ile
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.905C>T
  hgvsp: ENSP00000357369.4:p.Thr302Ile
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.905C>T
  hgvsp: ENSP00000357367.3:p.Thr302Ile
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr302Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

1-155149763-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149763
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149763
    reference: chr 1
allele count: 5
allele frequency: 4.125072188763303e-5
allele num: 121210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.528C>T
  hgvsp: ENST00000545012.1:c.528C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.837C>T
  hgvsp: ENST00000368382.1:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.906C>T
  hgvsp: ENST00000368383.3:c.906C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.973C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.927C>T
  hgvsp: ENST00000543729.1:c.927C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.906C>T
  hgvsp: ENST00000392451.2:c.906C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.906C>T
  hgvsp: ENST00000334634.4:c.906C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1145C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.884C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3813G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.906C>T
  hgvsp: ENST00000368385.4:c.906C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Thr302Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS

1-155149764-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149764
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149764
    reference: chr 1
allele count: 1
allele frequency: 8.25082508250825e-6
allele num: 121200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.885G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.974G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.907G>A
  hgvsp: ENSP00000334657.4:p.Glu303Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.907G>A
  hgvsp: ENSP00000376245.2:p.Glu303Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.907G>A
  hgvsp: ENSP00000357369.4:p.Glu303Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1146G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.928G>A
  hgvsp: ENSP00000442719.1:p.Glu310Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.529G>A
  hgvsp: ENSP00000440254.1:p.Glu177Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.838G>A
  hgvsp: ENSP00000357366.1:p.Glu280Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.907G>A
  hgvsp: ENSP00000357367.3:p.Glu303Lys
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3814C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11483
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Glu303Lys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

1-155149773-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149773
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149773
    reference: chr 1
allele count: 7
allele frequency: 5.779774093401149e-5
allele num: 121112
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.930+7G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.887+7G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.909+7G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.909+7G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.840+7G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.909+7G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.909+7G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.531+7G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.976+7G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1148+7G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3823C>T
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11394
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9888
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5086
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.909+7G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

1-155149776-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149776
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149776
    reference: chr 1
allele count: 2
allele frequency: 1.651254953764861e-5
allele num: 121120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.840+10G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.531+10G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.909+10G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.909+10G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.930+10G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.909+10G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.976+10G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.909+10G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.887+10G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1148+10G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3826C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18009
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum

1-155149795-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149795
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149795
    reference: chr 1
allele count: 2
allele frequency: 1.655245472903632e-5
allele num: 120828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1148+29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.930+29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.531+29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.840+29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.976+29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.887+29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.909+29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.909+29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.909+29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.909+29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3845C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9542
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7114
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-155149801-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149801
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149801
    reference: chr 1
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.909+35G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.887+35G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.976+35G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.840+35G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.531+35G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3851C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.909+35G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.909+35G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.930+35G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1148+35G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.909+35G>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5055
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1142
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7248
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

1-155149803-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149803
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149803
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 120728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1148+37C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.930+37C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.909+37C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.909+37C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.909+37C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.976+37C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.887+37C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3853G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.840+37C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.909+37C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.531+37C>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7068
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5052
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

1-155149805-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149805
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149805
    reference: chr 1
allele count: 1
allele frequency: 8.289811821271656e-6
allele num: 120630
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.887+39G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.976+39G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.909+39G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.909+39G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.930+39G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.840+39G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.909+39G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.909+39G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3855C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.531+39G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1148+39G>A
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5049
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12374
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1234
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-155149808-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149808
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149808
    reference: chr 1
allele count: 2
allele frequency: 1.658622348277521e-5
allele num: 120582
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3858T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.909+42A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.531+42A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.840+42A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.930+42A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.909+42A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.909+42A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.909+42A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.887+42A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1148+42A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.976+42A>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9266
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7034
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5042
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

1-155149816-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155149816
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155149816
    reference: chr 1
allele count: 4
allele frequency: 3.3309461552554e-5
allele num: 120086
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.909+50C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.531+50C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-3866G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.909+50C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.909+50C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.840+50C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.887+50C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.930+50C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.909+50C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.976+50C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1148+50C>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8584
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5980
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5016
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6892
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8269
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

1-155150434-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150434
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150434
    reference: chr 1
allele count: 1
allele frequency: 8.587671538738987e-6
allele num: 116446
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.910-44A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.910-44A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.841-44A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.910-44A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.888-44A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.977-44A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4484T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.931-44A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.532-44A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.910-44A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1149-44A>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9373
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

1-155150438-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150438
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150438
    reference: chr 1
allele count: 11
allele frequency: 9.43622825378307e-5
allele num: 116572
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.910-40T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.841-40T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.910-40T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.910-40T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.931-40T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.977-40T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4488A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.532-40T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1149-40T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.910-40T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.888-40T>C
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3071
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9510
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15998
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16529
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3727
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum

1-155150438-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150438
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150438
    reference: chr 1
allele count: 1
allele frequency: 8.578389321620972e-6
allele num: 116572
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.977-40T>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.931-40T>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.910-40T>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.910-40T>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.532-40T>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.888-40T>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1149-40T>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4488A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.910-40T>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.910-40T>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.841-40T>G
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3071
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9510
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/1-155150442-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150442
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150442
    reference: chr 1
allele count: 2
allele frequency: 1.713296897219319e-5
allele num: 116734
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.910-36A>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.841-36A>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.888-36A>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.532-36A>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1149-36A>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4492T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.910-36A>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.910-36A>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.977-36A>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.931-36A>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.910-36A>C
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3994
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9606
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23534
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2427
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

1-155150448-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150448
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150448
    reference: chr 1
allele count: 1
allele frequency: 8.547446877617655e-6
allele num: 116994
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4498G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.910-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.841-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.888-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.910-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.532-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.910-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.931-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.977-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.910-30C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1149-30C>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2999
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4393
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4640
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-155150449-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150449
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150449
    reference: chr 1
allele count: 2
allele frequency: 1.705117056285914e-5
allele num: 117294
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4499C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.888-29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.532-29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.931-29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.910-29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1149-29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.910-29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.910-29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.841-29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.910-29G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.977-29G>A
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP

1-155150450-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150450
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150450
    reference: chr 1
allele count: 2
allele frequency: 1.704216230955384e-5
allele num: 117356
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.977-28C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.910-28C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.910-28C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.910-28C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.931-28C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1149-28C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.910-28C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.888-28C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.532-28C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4500G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.841-28C>G
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17087
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25980
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

1-155150466-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150466
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150466
    reference: chr 1
allele count: 1
allele frequency: 8.410428931875526e-6
allele num: 118900
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.910-12C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.910-12C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.910-12C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.532-12C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.931-12C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1149-12C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.977-12C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4516G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.910-12C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.888-12C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.841-12C>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

1-155150480-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150480
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150480
    reference: chr 1
allele count: 1
allele frequency: 8.336390009670212e-6
allele num: 119956
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.912G>T
  hgvsp: ENST00000334634.4:c.912G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4530C>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.912G>T
  hgvsp: ENST00000392451.2:c.912G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.843G>T
  hgvsp: ENST00000368382.1:c.843G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.890G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.979G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.912G>T
  hgvsp: ENST00000368383.3:c.912G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.912G>T
  hgvsp: ENST00000368385.4:c.912G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.534G>T
  hgvsp: ENST00000545012.1:c.534G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.933G>T
  hgvsp: ENST00000543729.1:c.933G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1151G>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.912G>T
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-155150484-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150484
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150484
    reference: chr 1
allele count: 1
allele frequency: 8.329030001166064e-6
allele num: 120062
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.937G>A
  hgvsp: ENSP00000442719.1:p.Gly313Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.847G>A
  hgvsp: ENSP00000357366.1:p.Gly283Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.983G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.916G>A
  hgvsp: ENSP00000334657.4:p.Gly306Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.916G>A
  hgvsp: ENSP00000376245.2:p.Gly306Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4534C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1155G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.538G>A
  hgvsp: ENSP00000440254.1:p.Gly180Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.916G>A
  hgvsp: ENSP00000357367.3:p.Gly306Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.916G>A
  hgvsp: ENSP00000357369.4:p.Gly306Ser
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.894G>A
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4511
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly306Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

1-155150490-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150490
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150490
    reference: chr 1
allele count: 1
allele frequency: 8.32514693884347e-6
allele num: 120118
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.922C>T
  hgvsp: ENSP00000334657.4:p.Gln308Ter
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.943C>T
  hgvsp: ENSP00000442719.1:p.Gln315Ter
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.989C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.853C>T
  hgvsp: ENSP00000357366.1:p.Gln285Ter
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.900C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4540G>A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.922C>T
  hgvsp: ENSP00000357369.4:p.Gln308Ter
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1161C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.544C>T
  hgvsp: ENSP00000440254.1:p.Gln182Ter
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.922C>T
  hgvsp: ENSP00000376245.2:p.Gln308Ter
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.922C>T
  hgvsp: ENSP00000357367.3:p.Gln308Ter
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10610
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln308Ter
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-155150495-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150495
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150495
    reference: chr 1
allele count: 1
allele frequency: 8.314901967305805e-6
allele num: 120266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.927C>A
  hgvsp: ENST00000392451.2:c.927C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.994C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.927C>A
  hgvsp: ENST00000368383.3:c.927C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.948C>A
  hgvsp: ENST00000543729.1:c.948C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.858C>A
  hgvsp: ENST00000368382.1:c.858C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.927C>A
  hgvsp: ENST00000368385.4:c.927C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1166C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4545G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.905C>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.549C>A
  hgvsp: ENST00000545012.1:c.549C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.927C>A
  hgvsp: ENST00000334634.4:c.927C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala309Ala
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff

1-155150504-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150504
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150504
    reference: chr 1
allele count: 1
allele frequency: 8.301786544464368e-6
allele num: 120456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.867G>T
  hgvsp: ENSP00000357366.1:p.Glu289Asp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.936G>T
  hgvsp: ENSP00000376245.2:p.Glu312Asp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1175G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.914G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.936G>T
  hgvsp: ENSP00000334657.4:p.Glu312Asp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.936G>T
  hgvsp: ENSP00000357367.3:p.Glu312Asp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.558G>T
  hgvsp: ENSP00000440254.1:p.Glu186Asp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.957G>T
  hgvsp: ENSP00000442719.1:p.Glu319Asp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.936G>T
  hgvsp: ENSP00000357369.4:p.Glu312Asp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1003G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4554C>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu312Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

1-155150509-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150509
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150509
    reference: chr 1
allele count: 6
allele frequency: 4.981154631643615e-5
allele num: 120454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.941C>T
  hgvsp: ENSP00000357367.3:p.Ser314Leu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.563C>T
  hgvsp: ENSP00000440254.1:p.Ser188Leu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1180C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.941C>T
  hgvsp: ENSP00000357369.4:p.Ser314Leu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.941C>T
  hgvsp: ENSP00000334657.4:p.Ser314Leu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.941C>T
  hgvsp: ENSP00000376245.2:p.Ser314Leu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.919C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.962C>T
  hgvsp: ENSP00000442719.1:p.Ser321Leu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1008C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.872C>T
  hgvsp: ENSP00000357366.1:p.Ser291Leu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4559G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10729
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser314Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-155150510-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150510
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150510
    reference: chr 1
allele count: 7
allele frequency: 5.810575246949448e-5
allele num: 120470
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4560C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1009G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.564G>A
  hgvsp: ENST00000545012.1:c.564G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.942G>A
  hgvsp: ENST00000368385.4:c.942G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.942G>A
  hgvsp: ENST00000334634.4:c.942G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.963G>A
  hgvsp: ENST00000543729.1:c.963G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.942G>A
  hgvsp: ENST00000392451.2:c.942G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.873G>A
  hgvsp: ENST00000368382.1:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.942G>A
  hgvsp: ENST00000368383.3:c.942G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.920G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1181G>A
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19045
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4536
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser314Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

1-155150513-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150513
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150513
    reference: chr 1
allele count: 1
allele frequency: 8.29985724245543e-6
allele num: 120484
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.876G>T
  hgvsp: ENSP00000357366.1:p.Gln292His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4563C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.945G>T
  hgvsp: ENSP00000357367.3:p.Gln315His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.945G>T
  hgvsp: ENSP00000334657.4:p.Gln315His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.966G>T
  hgvsp: ENSP00000442719.1:p.Gln322His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1012G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1184G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.923G>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.945G>T
  hgvsp: ENSP00000357369.4:p.Gln315His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.945G>T
  hgvsp: ENSP00000376245.2:p.Gln315His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.567G>T
  hgvsp: ENSP00000440254.1:p.Gln189His
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gln315His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

1-155150519-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150519
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150519
    reference: chr 1
allele count: 1
allele frequency: 8.296964970213896e-6
allele num: 120526
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.951G>A
  hgvsp: ENST00000368385.4:c.951G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.951G>A
  hgvsp: ENST00000368383.3:c.951G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.882G>A
  hgvsp: ENST00000368382.1:c.882G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.951G>A
  hgvsp: ENST00000334634.4:c.951G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.972G>A
  hgvsp: ENST00000543729.1:c.972G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.929G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.951G>A
  hgvsp: ENST00000392451.2:c.951G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1190G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4569C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.573G>A
  hgvsp: ENST00000545012.1:c.573G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1018G>A
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val317Val
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

1-155150520-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150520
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150520
    reference: chr 1
allele count: 2
allele frequency: 1.660467587672689e-5
allele num: 120448
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1019C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.973C>T
  hgvsp: ENSP00000442719.1:p.Arg325Trp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.930C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.952C>T
  hgvsp: ENSP00000334657.4:p.Arg318Trp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.952C>T
  hgvsp: ENSP00000376245.2:p.Arg318Trp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1191C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.883C>T
  hgvsp: ENSP00000357366.1:p.Arg295Trp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4570G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.952C>T
  hgvsp: ENSP00000357367.3:p.Arg318Trp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.952C>T
  hgvsp: ENSP00000357369.4:p.Arg318Trp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.574C>T
  hgvsp: ENSP00000440254.1:p.Arg192Trp
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg318Trp
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP

1-155150521-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150521
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150521
    reference: chr 1
allele count: 11
allele frequency: 9.132875029059147e-5
allele num: 120444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.953G>A
  hgvsp: ENSP00000357369.4:p.Arg318Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.953G>A
  hgvsp: ENSP00000334657.4:p.Arg318Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1192G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.884G>A
  hgvsp: ENSP00000357366.1:p.Arg295Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1020G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.953G>A
  hgvsp: ENSP00000357367.3:p.Arg318Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.575G>A
  hgvsp: ENSP00000440254.1:p.Arg192Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.931G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.953G>A
  hgvsp: ENSP00000376245.2:p.Arg318Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.974G>A
  hgvsp: ENSP00000442719.1:p.Arg325Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4571C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19865
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10907
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg318Gln
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

1-155150523-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150523
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150523
    reference: chr 1
allele count: 7
allele frequency: 5.808742988017393e-5
allele num: 120508
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.955G>A
  hgvsp: ENSP00000376245.2:p.Gly319Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1194G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.955G>A
  hgvsp: ENSP00000334657.4:p.Gly319Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.955G>A
  hgvsp: ENSP00000357367.3:p.Gly319Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.577G>A
  hgvsp: ENSP00000440254.1:p.Gly193Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.955G>A
  hgvsp: ENSP00000357369.4:p.Gly319Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1022G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.886G>A
  hgvsp: ENSP00000357366.1:p.Gly296Arg
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.933G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4573C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.976G>A
  hgvsp: ENSP00000442719.1:p.Gly326Arg
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10815
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18613
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19954
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly319Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

1-155150524-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150524
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150524
    reference: chr 1
allele count: 2
allele frequency: 1.659200265472042e-5
allele num: 120540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1023G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.934G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.887G>A
  hgvsp: ENSP00000357366.1:p.Gly296Glu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.956G>A
  hgvsp: ENSP00000357369.4:p.Gly319Glu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4574C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.956G>A
  hgvsp: ENSP00000357367.3:p.Gly319Glu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1195G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.956G>A
  hgvsp: ENSP00000376245.2:p.Gly319Glu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.977G>A
  hgvsp: ENSP00000442719.1:p.Gly326Glu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.956G>A
  hgvsp: ENSP00000334657.4:p.Gly319Glu
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.578G>A
  hgvsp: ENSP00000440254.1:p.Gly193Glu
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19982
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly319Glu
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

1-155150531-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150531
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150531
    reference: chr 1
allele count: 1
allele frequency: 8.29393713195654e-6
allele num: 120570
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.963G>C
  hgvsp: ENST00000392451.2:c.963G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1202G>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.963G>C
  hgvsp: ENST00000368383.3:c.963G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.585G>C
  hgvsp: ENST00000545012.1:c.585G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.984G>C
  hgvsp: ENST00000543729.1:c.984G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4581C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1030G>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.963G>C
  hgvsp: ENST00000368385.4:c.963G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.894G>C
  hgvsp: ENST00000368382.1:c.894G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.941G>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.963G>C
  hgvsp: ENST00000334634.4:c.963G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly321Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

1-155150558-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150558
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150558
    reference: chr 1
allele count: 2
allele frequency: 1.656177542232527e-5
allele num: 120760
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.990A>T
  hgvsp: ENST00000392451.2:c.990A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1229A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.990A>T
  hgvsp: ENST00000368383.3:c.990A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.968A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.921A>T
  hgvsp: ENST00000368382.1:c.921A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.990A>T
  hgvsp: ENST00000368385.4:c.990A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4608T>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1057A>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.612A>T
  hgvsp: ENST00000545012.1:c.612A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.1011A>T
  hgvsp: ENST00000543729.1:c.1011A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.990A>T
  hgvsp: ENST00000334634.4:c.990A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18673
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser330Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

1-155150564-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150564
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150564
    reference: chr 1
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.1017T>C
  hgvsp: ENST00000543729.1:c.1017T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.974T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.996T>C
  hgvsp: ENST00000334634.4:c.996T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.996T>C
  hgvsp: ENST00000368383.3:c.996T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1235T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1063T>C
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.996T>C
  hgvsp: ENST00000368385.4:c.996T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.996T>C
  hgvsp: ENST00000392451.2:c.996T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.927T>C
  hgvsp: ENST00000368382.1:c.927T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.618T>C
  hgvsp: ENST00000545012.1:c.618T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4614A>G
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20682
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu332Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

1-155150579-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150579
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150579
    reference: chr 1
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.1011A>G
  hgvsp: ENST00000368383.3:c.1011A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.1011A>G
  hgvsp: ENST00000334634.4:c.1011A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1078A>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1250A>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.1032A>G
  hgvsp: ENST00000543729.1:c.1032A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.633A>G
  hgvsp: ENST00000545012.1:c.633A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.942A>G
  hgvsp: ENST00000368382.1:c.942A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.1011A>G
  hgvsp: ENST00000368385.4:c.1011A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.989A>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4629T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.1011A>G
  hgvsp: ENST00000392451.2:c.1011A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10940
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18462
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu337Glu
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

1-155150592-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150592
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150592
    reference: chr 1
allele count: 7
allele frequency: 5.821786789534091e-5
allele num: 120238
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4642G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.1024C>T
  hgvsp: ENSP00000334657.4:p.Arg342Trp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1263C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.1024C>T
  hgvsp: ENSP00000376245.2:p.Arg342Trp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.1002C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.1024C>T
  hgvsp: ENSP00000357369.4:p.Arg342Trp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1091C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.955C>T
  hgvsp: ENSP00000357366.1:p.Arg319Trp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.1024C>T
  hgvsp: ENSP00000357367.3:p.Arg342Trp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.1045C>T
  hgvsp: ENSP00000442719.1:p.Arg349Trp
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.646C>T
  hgvsp: ENSP00000440254.1:p.Arg216Trp
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17785
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4697
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg342Trp
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

1-155150593-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150593
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150593
    reference: chr 1
allele count: 315
allele frequency: 2.616452920459831e-3
allele num: 120392
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.1025G>A
  hgvsp: ENSP00000334657.4:p.Arg342Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1264G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.1046G>A
  hgvsp: ENSP00000442719.1:p.Arg349Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.1025G>A
  hgvsp: ENSP00000357367.3:p.Arg342Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.1025G>A
  hgvsp: ENSP00000357369.4:p.Arg342Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.1025G>A
  hgvsp: ENSP00000376245.2:p.Arg342Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.956G>A
  hgvsp: ENSP00000357366.1:p.Arg319Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4643C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1092G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.647G>A
  hgvsp: ENSP00000440254.1:p.Arg216Gln
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.1003G>A
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20278
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17741
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 3.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 10938
  bin: 3.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 5.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 4.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
hgvs: p.Arg342Gln
num of homozygotes: 2
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

1-155150599-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150599
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150599
    reference: chr 1
allele count: 12
allele frequency: 1.017018102922232e-4
allele num: 117992
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.1052C>G
  hgvsp: ENSP00000442719.1:p.Ala351Gly
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.1009C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4649G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.962C>G
  hgvsp: ENSP00000357366.1:p.Ala321Gly
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.1031C>G
  hgvsp: ENSP00000357369.4:p.Ala344Gly
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.1031C>G
  hgvsp: ENSP00000376245.2:p.Ala344Gly
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.653C>G
  hgvsp: ENSP00000440254.1:p.Ala218Gly
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1270C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.1031C>G
  hgvsp: ENSP00000334657.4:p.Ala344Gly
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1098C>G
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.1031C>G
  hgvsp: ENSP00000357367.3:p.Ala344Gly
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10833
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20370
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17761
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4598
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ala344Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

1-155150602-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150602
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150602
    reference: chr 1
allele count: 162
allele frequency: 1.34717094102385e-3
allele num: 120252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.965G>A
  hgvsp: ENSP00000357366.1:p.Arg322His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1101G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.1034G>A
  hgvsp: ENSP00000376245.2:p.Arg345His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4652C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.1055G>A
  hgvsp: ENSP00000442719.1:p.Arg352His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1273G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.1034G>A
  hgvsp: ENSP00000357369.4:p.Arg345His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.1034G>A
  hgvsp: ENSP00000357367.3:p.Arg345His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.1012G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.1034G>A
  hgvsp: ENSP00000334657.4:p.Arg345His
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.656G>A
  hgvsp: ENSP00000440254.1:p.Arg219His
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17824
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 20474
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 10814
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2067
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
hgvs: p.Arg345His
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

1-155150609-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150609
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150609
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 120242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1280C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.1019C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.663C>T
  hgvsp: ENST00000545012.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.1041C>T
  hgvsp: ENST00000368383.3:c.1041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.1062C>T
  hgvsp: ENST00000543729.1:c.1062C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.1041C>T
  hgvsp: ENST00000392451.2:c.1041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.972C>T
  hgvsp: ENST00000368382.1:c.972C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4659G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.1041C>T
  hgvsp: ENST00000334634.4:c.1041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1108C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.1041C>T
  hgvsp: ENST00000368385.4:c.1041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser347Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-155150610-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150610
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150610
    reference: chr 1
allele count: 6
allele frequency: 4.989024146876871e-5
allele num: 120264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1281G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.1042G>A
  hgvsp: ENSP00000357367.3:p.Ala348Thr
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.1042G>A
  hgvsp: ENSP00000334657.4:p.Ala348Thr
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.973G>A
  hgvsp: ENSP00000357366.1:p.Ala325Thr
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.1042G>A
  hgvsp: ENSP00000357369.4:p.Ala348Thr
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.1020G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1109G>A
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.1042G>A
  hgvsp: ENSP00000376245.2:p.Ala348Thr
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4660C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.664G>A
  hgvsp: ENSP00000440254.1:p.Ala222Thr
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.1063G>A
  hgvsp: ENSP00000442719.1:p.Ala355Thr
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala348Thr
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

1-155150611-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 155150611
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 155150611
    reference: chr 1
allele count: 1
allele frequency: 8.312137383006666e-6
allele num: 120306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357366
  ensembl transcript: ENST00000368382
  gene symbol: TRIM46
  hgvsc: ENST00000368382.1:c.974C>T
  hgvsp: ENSP00000357366.1:p.Ala325Val
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000474430
  gene symbol: TRIM46
  hgvsc: ENST00000474430.1:n.1110C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000334657
  ensembl transcript: ENST00000334634
  gene symbol: TRIM46
  hgvsc: ENST00000334634.4:c.1043C>T
  hgvsp: ENSP00000334657.4:p.Ala348Val
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000442719
  ensembl transcript: ENST00000543729
  gene symbol: TRIM46
  hgvsc: ENST00000543729.1:c.1064C>T
  hgvsp: ENSP00000442719.1:p.Ala355Val
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000468878
  gene symbol: TRIM46
  hgvsc: ENST00000468878.1:n.1282C>T
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357369
  ensembl transcript: ENST00000368385
  gene symbol: TRIM46
  hgvsc: ENST00000368385.4:c.1043C>T
  hgvsp: ENSP00000357369.4:p.Ala348Val
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000440254
  ensembl transcript: ENST00000545012
  gene symbol: TRIM46
  hgvsc: ENST00000545012.1:c.665C>T
  hgvsp: ENSP00000440254.1:p.Ala222Val
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000273088
  ensembl protein: ENSP00000477381
  ensembl transcript: ENST00000473363
  gene symbol: RP11-201K10.3
  hgvsc: ENST00000473363.2:c.49-4661G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000376245
  ensembl transcript: ENST00000392451
  gene symbol: TRIM46
  hgvsc: ENST00000392451.2:c.1043C>T
  hgvsp: ENSP00000376245.2:p.Ala348Val
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163462
  ensembl protein: ENSP00000357367
  ensembl transcript: ENST00000368383
  gene symbol: TRIM46
  hgvsc: ENST00000368383.3:c.1043C>T
  hgvsp: ENSP00000357367.3:p.Ala348Val
  variant of: http://identifiers.org/hgnc/19019
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163462
  ensembl transcript: ENST00000464760
  gene symbol: TRIM46
  hgvsc: ENST00000464760.1:n.1021C>T
  variant of: http://identifiers.org/hgnc/19019
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala348Val
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 676
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3807
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1095
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52619
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 450
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999220202747286e-5
allele num: 66684
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.097681e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.851e0

QD
type: SiteQuality
SIO_000300: 1.281e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.22e-1

FS
type: SiteQuality
SIO_000300: 2.561e0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeDepth
all individuals: 1088
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52618
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1092
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3762
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.01e0

DP
type: SiteQuality
SIO_000300: 6.097759e6

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-2

MQ
type: SiteQuality
SIO_000300: 6.026e1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.035e1

GenotypeDepth
all individuals: 2773
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 168
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1068
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52618
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 448
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3575
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.885170225043277e-4
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 1.754e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.07e-1

DP
type: SiteQuality
SIO_000300: 6.098082e6

QD
type: SiteQuality
SIO_000300: 1.194e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

GenotypeQuality
all individuals: 257
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3623
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52621
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

Latino
type: Population
allele count: 0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
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ReadPosRankSum
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SIO_000300: 4.7e-1

ClippingRankSum
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BaseQRankSum
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SIO_000300: -3.827e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.979e1

DP
type: SiteQuality
SIO_000300: 6.098119e6

VQSLOD
type: SiteQuality
SIO_000300: 5.86e0

QD
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SIO_000300: 1.347e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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SIO_000300: 8.599999999999999e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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East Asian
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African
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allele frequency: 0.0e0
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DP
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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FS
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QD
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SIO_000300: 1.347e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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InbreedingCoeff
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QD
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DP
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MQ
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MQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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SIO_000300: -6.15e-1

BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
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SIO_000300: -3.288e0

VQSLOD
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FS
type: SiteQuality
SIO_000300: 3.892e0

InbreedingCoeff
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SIO_000300: 0.0e0

MQRankSum
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QD
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SIO_000300: 1.369e1

ReadPosRankSum
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SIO_000300: 1.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.163e0

DP
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SIO_000300: 6.104225e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

South Asian
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allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

African
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.320489e6

BaseQRankSum
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ReadPosRankSum
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QD
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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SIO_000300: 5.982e1

VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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East Asian
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South Asian
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European (Finnish)
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DP
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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FS
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QD
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MQ
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

South Asian
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African
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European (Non-Finnish)
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Other
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East Asian
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European (Finnish)
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VQSLOD
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InbreedingCoeff
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QD
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MQ
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BaseQRankSum
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ReadPosRankSum
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FS
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DP
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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FS
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DP
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QD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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East Asian
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African
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Latino
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European (Non-Finnish)
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FS
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BaseQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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East Asian
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African
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Latino
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VQSLOD
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InbreedingCoeff
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MQ
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FS
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DP
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ClippingRankSum
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QD
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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African
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South Asian
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European (Non-Finnish)
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InbreedingCoeff
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MQRankSum
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MQ
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FS
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DP
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VQSLOD
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ReadPosRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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Other
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East Asian
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Latino
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MQ
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FS
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ReadPosRankSum
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DP
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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East Asian
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European (Finnish)
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European (Non-Finnish)
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African
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MQRankSum
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ClippingRankSum
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QD
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FS
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Non-Finnish)
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African
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DP
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QD
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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African
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South Asian
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allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

East Asian
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allele count: 3
allele frequency: 3.466605038132656e-4
allele num: 8654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.482e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: 5.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

DP
type: SiteQuality
SIO_000300: 5.321632e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.132e1

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 45001
bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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SIO_000300: 1.281e1

ClippingRankSum
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ReadPosRankSum
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SIO_000300: -8.599999999999999e-2

FS
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SIO_000300: 1.817e0

MQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

BaseQRankSum
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SIO_000300: 9.94e-1

DP
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SIO_000300: 5.321622e6

InbreedingCoeff
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 13

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1946
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994125756758376e-5
allele num: 66732
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 9
allele frequency: 5.450581395348837e-4
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

FS
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

BaseQRankSum
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SIO_000300: 1.01e0

VQSLOD
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SIO_000300: 2.77e0

QD
type: SiteQuality
SIO_000300: 1.192e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.67e-1

DP
type: SiteQuality
SIO_000300: 5.32281e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 45006
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 21
allele frequency: 1.271802325581395e-3
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

QD
type: SiteQuality
SIO_000300: 1.192e1

DP
type: SiteQuality
SIO_000300: 5.32281e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

GenotypeQuality
all individuals: 1129
bin: 7.25e1
variant carriers: 11

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 15
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variant carriers: 1

GenotypeQuality
all individuals: 1395
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variant carriers: 13

GenotypeQuality
all individuals: 9
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variant carriers: 2

GenotypeQuality
all individuals: 1590
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variant carriers: 13

GenotypeQuality
all individuals: 5
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variant carriers: 3

GenotypeQuality
all individuals: 8
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variant carriers: 2

GenotypeQuality
all individuals: 2418
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variant carriers: 16

GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 4170
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variant carriers: 11

GenotypeQuality
all individuals: 4
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variant carriers: 1

GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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variant carriers: 17

GenotypeQuality
all individuals: 14
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variant carriers: 5

GenotypeQuality
all individuals: 8
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variant carriers: 1

GenotypeQuality
all individuals: 47283
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variant carriers: 39033

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 6

East Asian
type: Population
allele count: 6638
allele frequency: 7.68464922435749e-1
allele num: 8638
num of homozygotes: 2537

Latino
type: Population
allele count: 7162
allele frequency: 6.191217150760719e-1
allele num: 11568
num of homozygotes: 2289

South Asian
type: Population
allele count: 7382
allele frequency: 4.473397163980123e-1
allele num: 16502
num of homozygotes: 1692

African
type: Population
allele count: 2873
allele frequency: 2.763562908811081e-1
allele num: 10396
num of homozygotes: 386

Other
type: Population
allele count: 373
allele frequency: 4.116997792494481e-1
allele num: 906
num of homozygotes: 82

European (Finnish)
type: Population
allele count: 3028
allele frequency: 4.578167523435138e-1
allele num: 6614
num of homozygotes: 692

European (Non-Finnish)
type: Population
allele count: 23700
allele frequency: 3.552051797008483e-1
allele num: 66722
num of homozygotes: 4333

FS
type: SiteQuality
SIO_000300: 1.138e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.86e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

DP
type: SiteQuality
SIO_000300: 6.080715e6

QD
type: SiteQuality
SIO_000300: 1.881e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.45e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5281
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variant carriers: 0

GenotypeQuality
all individuals: 3585
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.4e-1

FS
type: SiteQuality
SIO_000300: 2.665e0

BaseQRankSum
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SIO_000300: 1.72e0

QD
type: SiteQuality
SIO_000300: 1.441e1

MQRankSum
type: SiteQuality
SIO_000300: -4.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-2

DP
type: SiteQuality
SIO_000300: 2.401066e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.54e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4384
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.5004500450045e-5
allele num: 66660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.71e0

FS
type: SiteQuality
SIO_000300: 7.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.141e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-2

DP
type: SiteQuality
SIO_000300: 2.397875e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-2

QD
type: SiteQuality
SIO_000300: 1.38e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18
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GenotypeQuality
all individuals: 8154
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.648784253184099e-5
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.004383199735807e-5
allele num: 66618
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.398e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.003e0

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.005284650492433e-5
allele num: 66608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.22e0

MQRankSum
type: SiteQuality
SIO_000300: 4.11e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

QD
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VQSLOD
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ClippingRankSum
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SIO_000300: -2.39e-1

ReadPosRankSum
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SIO_000300: 1.01e0

InbreedingCoeff
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SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.394723e6

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: -3.691e0

InbreedingCoeff
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SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.16e-1

DP
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MQ
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SIO_000300: 5.973e1

VQSLOD
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MQRankSum
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SIO_000300: -3.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.91e-1

QD
type: SiteQuality
SIO_000300: 1.326e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8101
bin: 6.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
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allele count: 5
allele frequency: 3.029568589432865e-4
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503216884132043e-5
allele num: 66524
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

BaseQRankSum
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SIO_000300: -3.913e0

InbreedingCoeff
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SIO_000300: 3.0e-4

ClippingRankSum
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SIO_000300: -1.172e0

MQRankSum
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SIO_000300: -1.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.86e0

DP
type: SiteQuality
SIO_000300: 2.389989e6

VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15061
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66530
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.146e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 1.98e0

ReadPosRankSum
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SIO_000300: -1.44e-1

VQSLOD
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SIO_000300: 1.1e0

ClippingRankSum
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SIO_000300: -5.02e-1

DP
type: SiteQuality
SIO_000300: 2.389484e6

FS
type: SiteQuality
SIO_000300: 2.422e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.015499668295036e-5
allele num: 66324
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.63e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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DP
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.264e0

ReadPosRankSum
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SIO_000300: 1.04e-1

VQSLOD
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BaseQRankSum
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SIO_000300: -1.68e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.508932882665379e-5
allele num: 66272
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.37e-1

MQ
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
type: SiteQuality
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DP
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SIO_000300: 2.33716e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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QD
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 1
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allele num: 10336
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66174
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.085e1

MQRankSum
type: SiteQuality
SIO_000300: -7.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.507e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

DP
type: SiteQuality
SIO_000300: 2.316358e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1242
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212709192335678e-4
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

VQSLOD
type: SiteQuality
SIO_000300: 5.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.401e1

DP
type: SiteQuality
SIO_000300: 2.300023e6

GenotypeQuality
all individuals: 5015
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.51123595505618e-4
allele num: 8544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51828009231143e-5
allele num: 65864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.263788e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.37e0

QD
type: SiteQuality
SIO_000300: 1.435e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162520344106022e-4
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64938
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

DP
type: SiteQuality
SIO_000300: 1.588615e6

MQ
type: SiteQuality
SIO_000300: 5.943e1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.91e-1

FS
type: SiteQuality
SIO_000300: 1.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-1

QD
type: SiteQuality
SIO_000300: 1.214e1

VQSLOD
type: SiteQuality
SIO_000300: 9.399999999999999e-1

GenotypeQuality
all individuals: 1155
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.538698261270965e-4
allele num: 64990
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.090187180941577e-5
allele num: 14104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

VQSLOD
type: SiteQuality
SIO_000300: 4.23e0

DP
type: SiteQuality
SIO_000300: 1.601573e6

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.164e1

MQ
type: SiteQuality
SIO_000300: 5.944e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538698261270965e-5
allele num: 64990
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14104
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.944e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

DP
type: SiteQuality
SIO_000300: 1.601573e6

QD
type: SiteQuality
SIO_000300: 1.164e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10092
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.074747102050856e-5
allele num: 65046
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14172
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-1

BaseQRankSum
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SIO_000300: 4.96e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

DP
type: SiteQuality
SIO_000300: 1.614327e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535485059730369e-5
allele num: 65126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
SIO_000300: 1.186e1

BaseQRankSum
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SIO_000300: -3.817e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e-1

InbreedingCoeff
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SIO_000300: -1.4e-3

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.882312456985548e-5
allele num: 14530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.893153937475267e-5
allele num: 10108
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

FS
type: SiteQuality
SIO_000300: 9.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

QD
type: SiteQuality
SIO_000300: 1.014e1

DP
type: SiteQuality
SIO_000300: 1.644121e6

GenotypeQuality
all individuals: 2110
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.066449970868725e-5
allele num: 65222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

DP
type: SiteQuality
SIO_000300: 1.648005e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.95e-1

BaseQRankSum
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SIO_000300: 7.66e-1

QD
type: SiteQuality
SIO_000300: 1.015e1

MQRankSum
type: SiteQuality
SIO_000300: 4.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.45244547683572e-5
allele num: 15498
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65696
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.684326e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.969e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 1.172e0

MQRankSum
type: SiteQuality
SIO_000300: 4.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

QD
type: SiteQuality
SIO_000300: 1.181e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4012
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GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16108
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514508996183437e-5
allele num: 66028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.216e0

DP
type: SiteQuality
SIO_000300: 1.702551e6

FS
type: SiteQuality
SIO_000300: 7.583e0

MQRankSum
type: SiteQuality
SIO_000300: 9.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.7e-2

QD
type: SiteQuality
SIO_000300: 1.025e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.355e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4021
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513683700653911e-5
allele num: 66064
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
type: SiteQuality
SIO_000300: -1.895e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.7047e6

QD
type: SiteQuality
SIO_000300: 5.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.152e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.137e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66084
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.708513e6

FS
type: SiteQuality
SIO_000300: 6.99e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.452e0

InbreedingCoeff
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SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.78e-1

QD
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SIO_000300: 6.01e0

BaseQRankSum
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SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 5.872e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.078e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512447442451375e-5
allele num: 66118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.49e-1

VQSLOD
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DP
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BaseQRankSum
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MQRankSum
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SIO_000300: 5.659999999999999e-1

ClippingRankSum
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MQ
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FS
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QD
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InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66190
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.090875867949811e-5
allele num: 16418
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.425e0

FS
type: SiteQuality
SIO_000300: 4.658e0

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

DP
type: SiteQuality
SIO_000300: 1.711348e6

QD
type: SiteQuality
SIO_000300: 1.389e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 336
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511213201958532e-5
allele num: 66172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.787037037037037e-4
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.713458e6

VQSLOD
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SIO_000300: 5.08e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.205e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.067553271875472e-5
allele num: 66170
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.765625000000001e-5
allele num: 10240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.713429e6

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 5.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.21e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.16e0

QD
type: SiteQuality
SIO_000300: 1.459e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 358
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variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511167528032158e-5
allele num: 66174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.476e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.371e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.048e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.016e0

FS
type: SiteQuality
SIO_000300: 6.732e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 1.713545e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 802
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66192
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.530924678505818e-4
allele num: 6532
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

QD
type: SiteQuality
SIO_000300: 8.789999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 3.076e0

BaseQRankSum
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SIO_000300: -2.314e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.714485e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.023065993530639e-5
allele num: 66158
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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MQ
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
SIO_000300: 1.025e1

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.716958e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.532332209623046e-4
allele num: 6526
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.261403102570039e-4
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.023705853894533e-5
allele num: 66144
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.84e0

FS
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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DP
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SIO_000300: 1.717097e6

QD
type: SiteQuality
SIO_000300: 1.39e1

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.057497658398042e-4
allele num: 66194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.231e1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1478
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.020600495378481e-5
allele num: 66212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.715937e6

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.491e0

QD
type: SiteQuality
SIO_000300: 2.253e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.392e0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.718722e6

FS
type: SiteQuality
SIO_000300: 1.8645e1

VQSLOD
type: SiteQuality
SIO_000300: -2.749e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.581e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.46e-1

QD
type: SiteQuality
SIO_000300: 5.56e0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4026
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9102
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.014136299243452e-5
allele num: 66354
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 9.952e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

DP
type: SiteQuality
SIO_000300: 1.727994e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.69e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.006e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.83e-1

QD
type: SiteQuality
SIO_000300: 1.314e1

GenotypeQuality
all individuals: 3383
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4042
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9125
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1881
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.728216e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.53e0

MQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

FS
type: SiteQuality
SIO_000300: 3.613e0

QD
type: SiteQuality
SIO_000300: 1.307e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.62e-1

GenotypeQuality
all individuals: 201
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4626
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29841
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506795648374167e-5
allele num: 66366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e0

MQRankSum
type: SiteQuality
SIO_000300: -4.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.800000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

DP
type: SiteQuality
SIO_000300: 1.726879e6

VQSLOD
type: SiteQuality
SIO_000300: -2.337e-1

GenotypeQuality
all individuals: 172
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 255
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GenotypeQuality
all individuals: 4628
bin: 9.75e1
variant carriers: 7

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10088
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.028375882014476e-5
allele num: 66042
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.423654871546292e-4
allele num: 16504
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.03e-1

QD
type: SiteQuality
SIO_000300: 1.133e1

FS
type: SiteQuality
SIO_000300: 1.094e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.725701e6

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1455
bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 3962
bin: 7.25e1
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GenotypeQuality
all individuals: 1861
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variant carriers: 1

GenotypeQuality
all individuals: 200
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.75e1
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GenotypeQuality
all individuals: 4834
bin: 9.75e1
variant carriers: 310

African
type: Population
allele count: 290
allele frequency: 2.863914675093818e-2
allele num: 10126
num of homozygotes: 2

Other
type: Population
allele count: 2
allele frequency: 2.2271714922049e-3
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.21317157712305e-3
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.071666162685213e-5
allele num: 66140
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817741153659719e-4
allele num: 16504
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.314e1

VQSLOD
type: SiteQuality
SIO_000300: 3.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 1.094e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

DP
type: SiteQuality
SIO_000300: 1.730891e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.47e-1

GenotypeQuality
all individuals: 182
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 281
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GenotypeQuality
all individuals: 175
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GenotypeQuality
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GenotypeQuality
all individuals: 4614
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 802
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variant carriers: 5

GenotypeQuality
all individuals: 28056
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GenotypeQuality
all individuals: 238
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variant carriers: 3

GenotypeQuality
all individuals: 423
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variant carriers: 3

GenotypeQuality
all individuals: 8758
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GenotypeQuality
all individuals: 3291
bin: 8.25e1
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GenotypeQuality
all individuals: 465
bin: 3.25e1
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GenotypeQuality
all individuals: 935
bin: 2.25e1
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GenotypeQuality
all individuals: 4229
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variant carriers: 0

GenotypeQuality
all individuals: 1808
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variant carriers: 0

GenotypeQuality
all individuals: 3918
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1416
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 294
bin: 4.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.698159812276152e-4
allele num: 64776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.637733377006223e-4
allele num: 6106
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.55e0

QD
type: SiteQuality
SIO_000300: 2.6e-1

MQ
type: SiteQuality
SIO_000300: 5.913e1

FS
type: SiteQuality
SIO_000300: 1.76445e2

DP
type: SiteQuality
SIO_000300: 1.722798e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.466e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.165e0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1851
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3995
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4699
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28694
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8918
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4792
bin: 9.75e1
variant carriers: 159

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1460
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3362
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.598752598752599e-4
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 137
allele frequency: 2.074186222558668e-3
allele num: 66050
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 21
allele frequency: 3.206106870229008e-3
allele num: 6550
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.902951079421667e-5
allele num: 10098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

FS
type: SiteQuality
SIO_000300: 5.22e-1

DP
type: SiteQuality
SIO_000300: 1.714648e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.209e1

GenotypeQuality
all individuals: 177
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8979
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3379
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1043
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4713
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28780
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4667
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4002
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1855
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66062
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

QD
type: SiteQuality
SIO_000300: 6.5e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.710698e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 6.854e0

VQSLOD
type: SiteQuality
SIO_000300: -1.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4711
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4011
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28939
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1470
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1856
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4675
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 3381
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.910802775024777e-5
allele num: 10090
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.568418503269556e-5
allele num: 66064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.094e0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.54e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.4e-2

DP
type: SiteQuality
SIO_000300: 1.711092e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.122e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4011
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8997
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1057
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0