5-7885782-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885782
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885781
    reference: chr 5
allele count: 786
allele frequency: 7.745521196712588e-3
allele num: 101478
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-20delT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-20delT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-20delT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-20delT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-20delT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-20delT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-20delT
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 5621
  bin: 3.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 6.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 1.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 5297
  bin: 5.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 2.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 9.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 5.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 2.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 4.25e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 4.75e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 9.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 7.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 6761
  bin: 3.75e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 8.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 8.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 6.25e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 7.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 3.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 3087
  bin: 2.5e0
  variant carriers: 85
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 4.25e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 5.25e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 2.75e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 2508
  bin: 7.5e0
  variant carriers: 98
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 5.75e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 8.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 3.25e1
  variant carriers: 62
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: AT
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

5-7885782-ATT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885782
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885780
    reference: chr 5
allele count: 3
allele frequency: 2.95630580027198e-5
allele num: 101478
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-21_*573-20delTT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-21_985-20delTT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-21_*611-20delTT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-21_929-20delTT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-21_904-20delTT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-21_*573-20delTT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-21_144-20delTT
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5621
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32810
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: ATT
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

5-7885782-ATTTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885782
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885778
    reference: chr 5
allele count: 14
allele frequency: 1.379609373460257e-4
allele num: 101478
alternate allele: A
canonical: false
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6761
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5621
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2508
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1796
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3087
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32810
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5442
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 55658
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 13
  allele frequency: 9.01275651691625e-4
  allele num: 14424
  num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.183431952662722e-4
  allele num: 8450
  num of homozygotes: 0
population: East Asian
population: Latino
population: Other
reference allele: ATTTT
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

5-7885784-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885784
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885785
    reference: chr 5
allele count: 1
allele frequency: 9.68541763520843e-6
allele num: 103248
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-30_929-29insC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-30_144-29insC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-30_*573-29insC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-30_*573-29insC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-30_*611-29insC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-30_904-29insC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-30_985-29insC
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5326
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4883
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1938
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1057
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2566
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2741
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2354
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3430
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23036
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

5-7885785-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885785
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885786
    reference: chr 5
allele count: 1
allele frequency: 8.538834619851082e-6
allele num: 117112
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-29_144-28insA
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-29_*611-28insA
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-29_904-28insA
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-29_929-28insA
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-29_*573-28insA
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-29_*573-28insA
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-29_985-28insA
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5815
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3590
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29340
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2414
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

5-7885786-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885786
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885787
    reference: chr 5
allele count: 1
allele frequency: 8.537522410996328e-6
allele num: 117130
alternate allele: TC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-28_985-27insC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-28_144-27insC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-28_904-27insC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-28_*611-27insC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-28_*573-27insC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-28_929-27insC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-28_*573-27insC
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3065
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2265
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3350
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4655
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

5-7885794-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885794
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885794
    reference: chr 5
allele count: 5
allele frequency: 4.17808677050605e-5
allele num: 119672
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-20T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-20T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-20T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-20T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-20T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-20T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-20T>C
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 6899
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5657
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5908
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2626
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3103
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: T
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-7885794-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885794
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885795
    reference: chr 5
allele count: 1102
allele frequency: 9.208503242195333e-3
allele num: 119672
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-19dupC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-19dupC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-19dupC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-19dupC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-19dupC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-19dupC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-19dupC
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 3.25e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 2.25e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 6.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 6.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 7.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 2.75e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 5657
  bin: 3.75e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 4.25e1
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 8.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 5908
  bin: 5.25e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 5.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 6899
  bin: 4.75e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 7.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 9.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 6.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 2626
  bin: 8.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.25e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 7.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 7.5e0
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.5e0
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 2.25e1
  variant carriers: 54
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

5-7885794-T-TTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885794
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885796
    reference: chr 5
allele count: 16187
allele frequency: 1.352613811083629e-1
allele num: 119672
alternate allele: TTC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-20_929-19insTC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-20_985-19insTC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-20_*573-19insTC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-20_144-19insTC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-20_*611-19insTC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-20_904-19insTC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-20_*573-19insTC
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 5657
  bin: 3.75e1
  variant carriers: 1598
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 4.25e1
  variant carriers: 1736
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 7.75e1
  variant carriers: 605
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 9.25e1
  variant carriers: 313
genotype depth: GenotypeDepth
  all individuals: 5908
  bin: 5.25e1
  variant carriers: 1498
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 6.25e1
  variant carriers: 1115
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 2.75e1
  variant carriers: 757
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 3.25e1
  variant carriers: 1071
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 5.75e1
  variant carriers: 1284
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 7.25e1
  variant carriers: 716
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.75e1
  variant carriers: 340
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.5e0
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 203
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 6.75e1
  variant carriers: 912
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 9.75e1
  variant carriers: 1402
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 8.25e1
  variant carriers: 447
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 8.75e1
  variant carriers: 343
genotype depth: GenotypeDepth
  all individuals: 6899
  bin: 4.75e1
  variant carriers: 1664
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 2.25e1
  variant carriers: 468
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.75e1
  variant carriers: 97
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 9.25e1
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.75e1
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 3.25e1
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 7.5e0
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.25e1
  variant carriers: 117
genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 8.75e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 2626
  bin: 8.25e1
  variant carriers: 98
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 7.25e1
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.5e0
  variant carriers: 118
num of homozygotes: 161
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

5-7885794-T-TTTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885794
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885797
    reference: chr 5
allele count: 87
allele frequency: 7.269870980680527e-4
allele num: 119672
alternate allele: TTTC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-20_929-19insTTC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-20_985-19insTTC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-20_144-19insTTC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-20_*573-19insTTC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-20_904-19insTTC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-20_*573-19insTTC
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-20_*611-19insTTC
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 6899
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5908
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5657
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 3.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 3.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 40264
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.75e1
  variant carriers: 9
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/5-7885796-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885796
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885796
    reference: chr 5
allele count: 1
allele frequency: 8.333194446759221e-6
allele num: 120002
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-18A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-18A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-18A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-18A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-18A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-18A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-18A>C
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5464
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5456
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6629
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6425
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2250
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37330
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3373
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2778
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

5-7885798-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885798
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885798
    reference: chr 5
allele count: 3
allele frequency: 2.480117722921248e-5
allele num: 120962
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-16T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-16T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-16T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-16T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-16T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-16T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-16T>C
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2962
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5418
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3287
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3116
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37963
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

5-7885810-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885810
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885811
    reference: chr 5
allele count: 1
allele frequency: 8.257092842751923e-6
allele num: 121108
alternate allele: CT
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-3dupT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-3dupT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-3dupT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-3dupT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-3dupT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-3dupT
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-3dupT
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5420
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3057
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3376
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3117
  bin: 7.75e1
  variant carriers: 0
hgvs: c.985-3dupT
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

5-7885810-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885810
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885810
    reference: chr 5
allele count: 4
allele frequency: 3.302837137100769e-5
allele num: 121108
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-4C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-4C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-4C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-4C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-4C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-4C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-4C>G
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5420
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
hgvs: c.985-4C>G
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

5-7885812-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885812
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885812
    reference: chr 5
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.904-2A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*573-2A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.985-2A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*611-2A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.929-2A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*573-2A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.144-2A>G
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5421
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4180
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3070
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3293
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: c.985-2A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

5-7885816-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885816
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885816
    reference: chr 5
allele count: 9
allele frequency: 7.42623275463727e-5
allele num: 121192
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*613T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.146T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.906T>C
  hgvsp: ENST00000440940.2:c.906T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*575T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*575T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.987T>C
  hgvsp: ENST00000264668.2:c.987T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.931T>C
  hgvsp: ENST00000510525.1:c.931T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7240
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2531
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3377
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
hgvs: c.987T>C
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

5-7885818-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885818
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885818
    reference: chr 5
allele count: 2
allele frequency: 1.650137786505173e-5
allele num: 121202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.933C>T
  hgvsp: ENSP00000421991.1:p.Thr312Ile
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*615C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.989C>T
  hgvsp: ENSP00000264668.2:p.Thr330Ile
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.908C>T
  hgvsp: ENSP00000402510.2:p.Thr303Ile
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*577C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*577C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.148C>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2957
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2531
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3120
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2378
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr330Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

5-7885819-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885819
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885819
    reference: chr 5
allele count: 1
allele frequency: 8.249191579225235e-6
allele num: 121224
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.990A>G
  hgvsp: ENST00000264668.2:c.990A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.909A>G
  hgvsp: ENST00000440940.2:c.909A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*578A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*616A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.934A>G
  hgvsp: ENST00000510525.1:c.934A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*578A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.149A>G
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2957
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2531
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4530
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37987
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr330Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

5-7885821-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885821
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885821
    reference: chr 5
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.936A>G
  hgvsp: ENSP00000421991.1:p.Asp313Gly
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*580A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.992A>G
  hgvsp: ENSP00000264668.2:p.Asp331Gly
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.151A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*618A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.911A>G
  hgvsp: ENSP00000402510.2:p.Asp304Gly
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*580A>G
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2957
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5422
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2532
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp331Gly
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

5-7885829-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885829
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885829
    reference: chr 5
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*588T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.159T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1000T>C
  hgvsp: ENSP00000264668.2:p.Tyr334His
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.919T>C
  hgvsp: ENSP00000402510.2:p.Tyr307His
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.944T>C
  hgvsp: ENSP00000421991.1:p.Tyr316His
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*626T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*588T>C
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3377
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr334His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

5-7885830-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885830
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885830
    reference: chr 5
allele count: 2
allele frequency: 1.648994937585542e-5
allele num: 121286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.945A>G
  hgvsp: ENSP00000421991.1:p.Tyr316Cys
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*589A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*589A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.920A>G
  hgvsp: ENSP00000402510.2:p.Tyr307Cys
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1001A>G
  hgvsp: ENSP00000264668.2:p.Tyr334Cys
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*627A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.160A>G
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Tyr334Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

5-7885832-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885832
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885832
    reference: chr 5
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*591C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.922C>G
  hgvsp: ENSP00000402510.2:p.Gln308Glu
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1003C>G
  hgvsp: ENSP00000264668.2:p.Gln335Glu
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.162C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.947C>G
  hgvsp: ENSP00000421991.1:p.Gln317Glu
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*591C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*629C>G
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6705
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37990
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gln335Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

5-7885833-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885833
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885833
    reference: chr 5
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*630A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.163A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.948A>T
  hgvsp: ENSP00000421991.1:p.Gln317Leu
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*592A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.923A>T
  hgvsp: ENSP00000402510.2:p.Gln308Leu
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1004A>T
  hgvsp: ENSP00000264668.2:p.Gln335Leu
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*592A>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2388
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37990
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2533
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln335Leu
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS

5-7885839-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885839
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885839
    reference: chr 5
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*636G>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1010G>C
  hgvsp: ENSP00000264668.2:p.Gly337Ala
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*598G>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.929G>C
  hgvsp: ENSP00000402510.2:p.Gly310Ala
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.954G>C
  hgvsp: ENSP00000421991.1:p.Gly319Ala
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.169G>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*598G>C
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3380
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3135
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly337Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

5-7885845-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885845
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885845
    reference: chr 5
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*604C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.935C>G
  hgvsp: ENSP00000402510.2:p.Ala312Gly
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1016C>G
  hgvsp: ENSP00000264668.2:p.Ala339Gly
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.175C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*642C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*604C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.960C>G
  hgvsp: ENSP00000421991.1:p.Ala321Gly
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2395
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3136
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3382
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala339Gly
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

5-7885846-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885846
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885846
    reference: chr 5
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*605C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*605C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.961C>G
  hgvsp: ENST00000510525.1:c.961C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1017C>G
  hgvsp: ENST00000264668.2:c.1017C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*643C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.936C>G
  hgvsp: ENST00000440940.2:c.936C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.176C>G
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3135
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37993
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3142
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala339Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD

5-7885846-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885846
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885846
    reference: chr 5
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1017C>T
  hgvsp: ENST00000264668.2:c.1017C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.936C>T
  hgvsp: ENST00000440940.2:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.961C>T
  hgvsp: ENST00000510525.1:c.961C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*605C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*643C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.176C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*605C>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4758
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37993
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3135
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala339Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

5-7885852-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885852
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885852
    reference: chr 5
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*649C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*611C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.967C>T
  hgvsp: ENST00000510525.1:c.967C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.942C>T
  hgvsp: ENST00000440940.2:c.942C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.182C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*611C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1023C>T
  hgvsp: ENST00000264668.2:c.1023C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5425
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3138
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser341Ser
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum

5-7885853-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885853
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885853
    reference: chr 5
allele count: 4
allele frequency: 3.295272930980509e-5
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.968G>A
  hgvsp: ENSP00000421991.1:p.Val324Met
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*612G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.183G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1024G>A
  hgvsp: ENSP00000264668.2:p.Val342Met
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.943G>A
  hgvsp: ENSP00000402510.2:p.Val315Met
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*612G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*650G>A
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4751
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3302
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val342Met
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

5-7885856-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885856
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885856
    reference: chr 5
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.946A>T
  hgvsp: ENSP00000402510.2:p.Ile316Phe
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1027A>T
  hgvsp: ENSP00000264668.2:p.Ile343Phe
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.186A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*615A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.971A>T
  hgvsp: ENSP00000421991.1:p.Ile325Phe
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*653A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*615A>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3148
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2403
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4753
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37993
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3303
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile343Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum

5-7885860-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885860
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885860
    reference: chr 5
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1031G>T
  hgvsp: ENSP00000264668.2:p.Cys344Phe
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.950G>T
  hgvsp: ENSP00000402510.2:p.Cys317Phe
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*619G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.975G>T
  hgvsp: ENSP00000421991.1:p.Cys326Phe
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*657G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.190G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*619G>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Cys344Phe
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

5-7885862-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885862
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885862
    reference: chr 5
allele count: 5
allele frequency: 4.118955432902216e-5
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1033C>T
  hgvsp: ENSP00000264668.2:p.Pro345Ser
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*621C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.977C>T
  hgvsp: ENSP00000421991.1:p.Pro327Ser
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.952C>T
  hgvsp: ENSP00000402510.2:p.Pro318Ser
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.192C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*621C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*659C>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3382
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4748
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3151
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro345Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

5-7885868-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885868
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885868
    reference: chr 5
allele count: 41
allele frequency: 3.377376519819434e-4
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.198A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*665A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*627A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1039A>G
  hgvsp: ENSP00000264668.2:p.Ser347Gly
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.983A>G
  hgvsp: ENSP00000421991.1:p.Ser329Gly
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*627A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.958A>G
  hgvsp: ENSP00000402510.2:p.Ser320Gly
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6699
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 9.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38003
  bin: 9.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 2534
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser347Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-7885883-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885883
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885883
    reference: chr 5
allele count: 12
allele frequency: 9.884515905833511e-5
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.213C>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*642C>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*680C>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.998C>A
  hgvsp: ENSP00000421991.1:p.Gln334Lys
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.973C>A
  hgvsp: ENSP00000402510.2:p.Gln325Lys
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*642C>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1054C>A
  hgvsp: ENSP00000264668.2:p.Gln352Lys
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3154
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3385
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln352Lys
num of homozygotes: 1
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

5-7885894-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885894
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885894
    reference: chr 5
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.224C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*653C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*653C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1009C>T
  hgvsp: ENST00000510525.1:c.1009C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*691C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.984C>T
  hgvsp: ENST00000440940.2:c.984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1065C>T
  hgvsp: ENST00000264668.2:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4747
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3386
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu355Leu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD

5-7885902-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885902
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885902
    reference: chr 5
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*699T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*661T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1073T>C
  hgvsp: ENSP00000264668.2:p.Leu358Pro
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.5T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.992T>C
  hgvsp: ENSP00000402510.2:p.Leu331Pro
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1017T>C
  hgvsp: ENSP00000421991.1:p.Leu340Pro
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*661T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.232T>C
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5422
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2534
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu358Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

5-7885903-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885903
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885903
    reference: chr 5
allele count: 9
allele frequency: 7.413631196560076e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.6G>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*700G>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*662G>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.993G>C
  hgvsp: ENST00000440940.2:c.993G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1018G>C
  hgvsp: ENST00000510525.1:c.1018G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1074G>C
  hgvsp: ENST00000264668.2:c.1074G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.233G>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*662G>C
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2534
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu358Leu
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-7885907-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885907
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885907
    reference: chr 5
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.997C>A
  hgvsp: ENSP00000402510.2:p.Leu333Ile
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1078C>A
  hgvsp: ENSP00000264668.2:p.Leu360Ile
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.10C>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1022C>A
  hgvsp: ENSP00000421991.1:p.Leu342Ile
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*666C>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*666C>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*704C>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.237C>A
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6261
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7170
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2490
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38550
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4548
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu360Ile
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

5-7885907-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885907
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885907
    reference: chr 5
allele count: 1618
allele frequency: 1.332784184514003e-2
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1078C>G
  hgvsp: ENSP00000264668.2:p.Leu360Val
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.237C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*666C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.997C>G
  hgvsp: ENSP00000402510.2:p.Leu333Val
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*666C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1022C>G
  hgvsp: ENSP00000421991.1:p.Leu342Val
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.10C>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*704C>G
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6261
  bin: 9.75e1
  variant carriers: 1039
genotype depth: GenotypeDepth
  all individuals: 7170
  bin: 4.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 6657
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 8.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 7.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 6.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 7.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 5.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 8.25e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 6.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 5472
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 9.25e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4548
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 7.25e1
  variant carriers: 1
hgvs: p.Leu360Val
num of homozygotes: 107
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

5-7885915-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885915
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885915
    reference: chr 5
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.245T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*712T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1086T>C
  hgvsp: ENST00000264668.2:c.1086T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*674T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1005T>C
  hgvsp: ENST00000440940.2:c.1005T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*674T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1030T>C
  hgvsp: ENST00000510525.1:c.1030T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.18T>C
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5400
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5548
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38194
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2372
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp362Asp
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-7885919-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885919
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885919
    reference: chr 5
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1009A>T
  hgvsp: ENSP00000402510.2:p.Arg337Ter
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*678A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1034A>T
  hgvsp: ENSP00000421991.1:p.Arg346Ter
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*716A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*678A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1090A>T
  hgvsp: ENSP00000264668.2:p.Arg364Ter
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.249A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.22A>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5548
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5400
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2373
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38194
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg364Ter
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

5-7885926-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885926
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885926
    reference: chr 5
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*723A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1016A>G
  hgvsp: ENSP00000402510.2:p.His339Arg
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*685A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.29A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1041A>G
  hgvsp: ENSP00000421991.1:p.His348Arg
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1097A>G
  hgvsp: ENSP00000264668.2:p.His366Arg
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.256A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*685A>G
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5548
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5400
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38194
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3386
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His366Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

5-7885930-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885930
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885930
    reference: chr 5
allele count: 19
allele frequency: 1.565203064502842e-4
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.33C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*727C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*689C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1045C>T
  hgvsp: ENST00000510525.1:c.1045C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1101C>T
  hgvsp: ENST00000264668.2:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1020C>T
  hgvsp: ENST00000440940.2:c.1020C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.260C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*689C>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5556
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3997
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4572
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2513
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Cys367Cys
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

5-7885931-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885931
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885931
    reference: chr 5
allele count: 84
allele frequency: 6.919845127275723e-4
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1046G>A
  hgvsp: ENSP00000421991.1:p.Val350Ile
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1021G>A
  hgvsp: ENSP00000402510.2:p.Val341Ile
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.261G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*690G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1102G>A
  hgvsp: ENSP00000264668.2:p.Val368Ile
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*728G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*690G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.34G>A
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7267
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5594
  bin: 9.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5543
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 8.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4562
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val368Ile
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

5-7885940-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885940
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885940
    reference: chr 5
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1030A>T
  hgvsp: ENSP00000402510.2:p.Lys344Ter
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*737A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1055A>T
  hgvsp: ENSP00000421991.1:p.Lys353Ter
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.270A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*699A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1111A>T
  hgvsp: ENSP00000264668.2:p.Lys371Ter
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.43A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*699A>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5400
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4550
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3295
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3131
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys371Ter
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

5-7885945-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885945
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885945
    reference: chr 5
allele count: 22
allele frequency: 1.812668907784589e-4
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1060A>G
  hgvsp: ENSP00000421991.1:p.Ile354Met
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*704A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*742A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1035A>G
  hgvsp: ENSP00000402510.2:p.Ile345Met
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*704A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1116A>G
  hgvsp: ENSP00000264668.2:p.Ile372Met
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.48A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.275A>G
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5400
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3125
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3127
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2510
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile372Met
num of homozygotes: 1
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

5-7885955-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885955
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885955
    reference: chr 5
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*714A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1045A>T
  hgvsp: ENSP00000402510.2:p.Thr349Ser
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.58A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1126A>T
  hgvsp: ENSP00000264668.2:p.Thr376Ser
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.285A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*714A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1070A>T
  hgvsp: ENSP00000421991.1:p.Thr358Ser
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*752A>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3125
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4444
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr376Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-7885956-CAAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885956
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885953
    reference: chr 5
allele count: 6
allele frequency: 4.944783253667381e-5
allele num: 121340
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1128_1130delAAA
  hgvsp: ENSP00000264668.2:p.Lys379del
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1072_1074delAAA
  hgvsp: ENSP00000421991.1:p.Lys361del
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.287_289delAAA
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*754_*756delAAA
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1047_1049delAAA
  hgvsp: ENSP00000402510.2:p.Lys352del
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*716_*718delAAA
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*716_*718delAAA
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.60_62delAAA
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5555
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3118
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys379del
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: CAAA
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

5-7885959-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885959
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885959
    reference: chr 5
allele count: 20754
allele frequency: 1.710738896765472e-1
allele num: 121316
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*718A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1049A>G
  hgvsp: ENSP00000402510.2:p.Lys350Arg
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*718A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*756A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.289A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1130A>G
  hgvsp: ENSP00000264668.2:p.Lys377Arg
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.62A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1074A>G
  hgvsp: ENSP00000421991.1:p.Lys359Arg
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 3.25e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4915
  bin: 5.25e1
  variant carriers: 269
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 2.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 3162
  bin: 6.25e1
  variant carriers: 621
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 2.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 4147
  bin: 5.75e1
  variant carriers: 387
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 12827
  bin: 9.75e1
  variant carriers: 9604
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 3.75e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 4.25e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 8.25e1
  variant carriers: 1281
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 7.25e1
  variant carriers: 980
genotype depth: GenotypeDepth
  all individuals: 5760
  bin: 4.75e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 9.25e1
  variant carriers: 1264
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 8.75e1
  variant carriers: 1268
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 7.75e1
  variant carriers: 1073
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 6.75e1
  variant carriers: 754
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 8.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 4
hgvs: p.Lys377Arg
num of homozygotes: 2514
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

5-7885964-A-AAAGGTAACAGCCCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885964
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885978
    reference: chr 5
allele count: 8
allele frequency: 6.5955447095487e-5
allele num: 121294
alternate allele: AAAGGTAACAGCCCT
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5457
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7888
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6739
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38453
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3039
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2400
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/5-7885966-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885966
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885966
    reference: chr 5
allele count: 6
allele frequency: 4.946658532161525e-5
allele num: 121294
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1137A>C
  hgvsp: ENSP00000264668.2:p.Lys379Asn
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.296A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1081A>C
  hgvsp: ENSP00000421991.1:p.Lys361Asn
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*725A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1056A>C
  hgvsp: ENSP00000402510.2:p.Lys352Asn
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.69A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*725A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*763A>C
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3039
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3657
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2142
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys379Asn
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

5-7885972-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885972
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885972
    reference: chr 5
allele count: 1
allele frequency: 8.247422680412371e-6
allele num: 121250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.297+5C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*764+5C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+5C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*726+5C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1057+5C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.70+5C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1138+5C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*726+5C>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7634
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5457
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3778
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3097
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38451
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1138+5C>T
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-7885974-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885974
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885974
    reference: chr 5
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1138+7G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.297+7G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*764+7G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1057+7G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.70+7G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*726+7G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+7G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*726+7G>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3778
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5457
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7889
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6739
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3034
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1138+7G>T
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

5-7885976-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885976
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885976
    reference: chr 5
allele count: 2
allele frequency: 1.649675014022238e-5
allele num: 121236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1057+9C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+9C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*764+9C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.70+9C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.297+9C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1138+9C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*726+9C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*726+9C>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5457
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

5-7885989-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885989
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885989
    reference: chr 5
allele count: 195
allele frequency: 1.60938892740418e-3
allele num: 121164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.70+22C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1057+22C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*764+22C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*726+22C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1138+22C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.297+22C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*726+22C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+22C>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7632
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7888
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 6388
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 9.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 6.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6741
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD

5-7885990-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7885990
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7885990
    reference: chr 5
allele count: 2
allele frequency: 1.651064110819423e-5
allele num: 121134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1057+23G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+23G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*726+23G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*764+23G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1138+23G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.70+23G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*726+23G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.297+23G>A
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6737
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7648
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38385
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3944
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3666
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3107
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

5-7886001-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886001
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886001
    reference: chr 5
allele count: 54
allele frequency: 4.458535618745665e-4
allele num: 121116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+34G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.70+34G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*764+34G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*726+34G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1138+34G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1057+34G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.297+34G>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*726+34G>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7645
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7897
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4648
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3103
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3782
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3662
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-7886013-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886013
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886013
    reference: chr 5
allele count: 1
allele frequency: 8.260093834665961e-6
allele num: 121064
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.70+46A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+46A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*764+46A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.297+46A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*726+46A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*726+46A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1138+46A>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1057+46A>C
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6743
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2892
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2119
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

5-7886014-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886014
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886014
    reference: chr 5
allele count: 1
allele frequency: 8.260230295220631e-6
allele num: 121062
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1057+47C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1138+47C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*726+47C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*726+47C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+47C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.297+47C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*764+47C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.70+47C>T
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6743
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7890
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3665
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2118
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2393
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38383
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

5-7886016-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886016
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886016
    reference: chr 5
allele count: 3
allele frequency: 2.4786833234186e-5
allele num: 121032
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+49G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1138+49G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1057+49G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.297+49G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*726+49G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*764+49G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.70+49G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*726+49G>A
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6743
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7890
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3074
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3231
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

5-7886017-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886017
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886017
    reference: chr 5
allele count: 1
allele frequency: 8.261595148791329e-6
allele num: 121042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.297+50G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.70+50G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*726+50G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+50G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*726+50G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1138+50G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1057+50G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*764+50G>A
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7631
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3664
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2391
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

5-7886678-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886678
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886678
    reference: chr 5
allele count: 1
allele frequency: 8.271709100534353e-6
allele num: 120894
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.298-50A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*765-50A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*727-50A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1139-50A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1058-50A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+711A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.71-50A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*727-50A>G
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4519
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12296
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21968
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1397
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2001
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2362
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

5-7886682-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886682
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886682
    reference: chr 5
allele count: 1
allele frequency: 8.268973158913126e-6
allele num: 120934
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*727-46T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*727-46T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1058-46T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1139-46T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.71-46T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+715T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.298-46T>C
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*765-46T>C
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10885
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12289
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8811
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

5-7886685-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886685
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886685
    reference: chr 5
allele count: 2
allele frequency: 1.653220473482343e-5
allele num: 120976
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*765-43A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.298-43A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.71-43A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*727-43A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1139-43A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+718A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*727-43A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1058-43A>G
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8876
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

5-7886694-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886694
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886694
    reference: chr 5
allele count: 11
allele frequency: 9.082652134423252e-5
allele num: 121110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1058-34G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+727G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*765-34G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*727-34G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000512311
  gene symbol: MTRR
  hgvsc: ENST00000512311.1:n.3G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.71-34G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*727-34G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1139-34G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.298-34G>A
  variant of: http://identifiers.org/hgnc/7473
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18956
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27947
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8958
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

5-7886697-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886697
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886697
    reference: chr 5
allele count: 88
allele frequency: 7.263722657862154e-4
allele num: 121150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*727-31A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*765-31A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*727-31A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1139-31A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+730A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.298-31A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000512311
  gene symbol: MTRR
  hgvsc: ENST00000512311.1:n.6A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.71-31A>G
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1058-31A>G
  variant of: http://identifiers.org/hgnc/7473
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19077
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11114
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4515
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 9.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12654
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

5-7886697-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886697
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886697
    reference: chr 5
allele count: 15
allele frequency: 1.238134543953776e-4
allele num: 121150
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1139-31A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1058-31A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*727-31A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.298-31A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+730A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000512311
  gene symbol: MTRR
  hgvsc: ENST00000512311.1:n.6A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*765-31A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.71-31A>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*727-31A>T
  variant of: http://identifiers.org/hgnc/7473
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4515
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11114
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

5-7886702-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886702
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886702
    reference: chr 5
allele count: 2
allele frequency: 1.65016501650165e-5
allele num: 121200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*765-26C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000512311
  gene symbol: MTRR
  hgvsc: ENST00000512311.1:n.11C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1058-26C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*727-26C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.298-26C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.71-26C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*727-26C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+735C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1139-26C>T
  variant of: http://identifiers.org/hgnc/7473
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9002
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

5-7886711-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886711
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886711
    reference: chr 5
allele count: 2
allele frequency: 1.648858989579211e-5
allele num: 121296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1058-17C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+744C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*727-17C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.298-17C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*727-17C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*765-17C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000512311
  gene symbol: MTRR
  hgvsc: ENST00000512311.1:n.20C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.71-17C>T
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1139-17C>T
  variant of: http://identifiers.org/hgnc/7473
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19362
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

5-7886712-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886712
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886712
    reference: chr 5
allele count: 22
allele frequency: 1.813475773612279e-4
allele num: 121314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*727-16G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*765-16G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.71-16G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000512311
  gene symbol: MTRR
  hgvsc: ENST00000512311.1:n.21G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*727-16G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+745G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1058-16G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1139-16G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.298-16G>A
  variant of: http://identifiers.org/hgnc/7473
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12676
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9038
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

5-7886730-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7886730
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 7886730
    reference: chr 5
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000426710
  ensembl transcript: ENST00000513439
  gene symbol: MTRR
  hgvsc: ENST00000513439.1:c.*767G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000421991
  ensembl transcript: ENST00000510525
  gene symbol: MTRR
  hgvsc: ENST00000510525.1:c.1082+763G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000424719
  ensembl transcript: ENST00000511461
  gene symbol: MTRR
  hgvsc: ENST00000511461.1:c.*729G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000512311
  gene symbol: MTRR
  hgvsc: ENST00000512311.1:n.39G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000264668
  ensembl transcript: ENST00000264668
  gene symbol: MTRR
  hgvsc: ENST00000264668.2:c.1141G>A
  hgvsp: ENSP00000264668.2:p.Ala381Thr
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000341918
  ensembl transcript: ENST00000341013
  gene symbol: MTRR
  hgvsc: ENST00000341013.6:c.*729G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl protein: ENSP00000402510
  ensembl transcript: ENST00000440940
  gene symbol: MTRR
  hgvsc: ENST00000440940.2:c.1060G>A
  hgvsp: ENSP00000402510.2:p.Ala354Thr
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000509961
  gene symbol: MTRR
  hgvsc: ENST00000509961.1:n.73G>A
  variant of: http://identifiers.org/hgnc/7473
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000124275
  ensembl transcript: ENST00000508101
  gene symbol: MTRR
  hgvsc: ENST00000508101.1:n.300G>A
  variant of: http://identifiers.org/hgnc/7473
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12694
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala381Thr
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 21

GenotypeQuality
all individuals: 1796
bin: 1.75e1
variant carriers: 63

GenotypeQuality
all individuals: 1835
bin: 2.25e1
variant carriers: 60

GenotypeQuality
all individuals: 1110
bin: 6.25e1
variant carriers: 35

GenotypeQuality
all individuals: 979
bin: 6.75e1
variant carriers: 22

GenotypeQuality
all individuals: 2015
bin: 1.25e1
variant carriers: 83

GenotypeQuality
all individuals: 875
bin: 8.25e1
variant carriers: 16

GenotypeQuality
all individuals: 32810
bin: 9.75e1
variant carriers: 197

GenotypeQuality
all individuals: 1281
bin: 4.75e1
variant carriers: 48

GenotypeQuality
all individuals: 975
bin: 7.25e1
variant carriers: 27

European (Non-Finnish)
type: Population
allele count: 393
allele frequency: 7.060979553702972e-3
allele num: 55658
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.366863905325444e-3
allele num: 8450
num of homozygotes: 0

Latino
type: Population
allele count: 66
allele frequency: 6.908101318819342e-3
allele num: 9554
num of homozygotes: 0

East Asian
type: Population
allele count: 120
allele frequency: 1.670843776106934e-2
allele num: 7182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 26
allele frequency: 4.777655273796398e-3
allele num: 5442
num of homozygotes: 0

South Asian
type: Population
allele count: 154
allele frequency: 1.067665002773156e-2
allele num: 14424
num of homozygotes: 0

Other
type: Population
allele count: 7
allele frequency: 9.114583333333334e-3
allele num: 768
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.392e-1

MQ
type: SiteQuality
SIO_000300: 5.996e1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

QD
type: SiteQuality
SIO_000300: 1.074e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-2

DP
type: SiteQuality
SIO_000300: 3.058175e6

GenotypeQuality
all individuals: 2508
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 1689
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3087
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 933
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1796
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.593373818678357e-5
allele num: 55658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9554
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.932889628397117e-5
allele num: 14424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.996e1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.392e-1

DP
type: SiteQuality
SIO_000300: 3.058175e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-2

QD
type: SiteQuality
SIO_000300: 1.074e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

QD
type: SiteQuality
SIO_000300: 1.074e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

DP
type: SiteQuality
SIO_000300: 3.058175e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.392e-1

MQ
type: SiteQuality
SIO_000300: 5.996e1

GenotypeQuality
all individuals: 1642
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1444
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14210
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.838646202282565e-5
allele num: 10164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7042
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6076
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.221e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.06e-2

DP
type: SiteQuality
SIO_000300: 3.413792e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.25e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

GenotypeQuality
all individuals: 3293
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3337
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4666
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3045
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.572623765490344e-5
allele num: 63588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.461e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.242e0

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 3.397646e6

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 6.04e1

QD
type: SiteQuality
SIO_000300: 5.96e0

GenotypeQuality
all individuals: 2455
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1139
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29382
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 866
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3656
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3364
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9820
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.572623765490344e-5
allele num: 63588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16324
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.34e-1

FS
type: SiteQuality
SIO_000300: 2.632e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 3.398575e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

VQSLOD
type: SiteQuality
SIO_000300: 9.47e-1

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
all individuals: 170
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 149
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2547
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2398
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2606
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 385
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40264
bin: 9.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.622183603158633e-5
allele num: 65598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.99e0

FS
type: SiteQuality
SIO_000300: 1.0993e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.66e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.112e0

MQ
type: SiteQuality
SIO_000300: 6.022e1

DP
type: SiteQuality
SIO_000300: 3.39237e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

GenotypeQuality
all individuals: 385
bin: 3.75e1
variant carriers: 55

GenotypeQuality
all individuals: 149
bin: 1.75e1
variant carriers: 52

GenotypeQuality
all individuals: 2012
bin: 8.75e1
variant carriers: 37

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 51

GenotypeQuality
all individuals: 40264
bin: 9.75e1
variant carriers: 428

GenotypeQuality
all individuals: 228
bin: 5.25e1
variant carriers: 52

GenotypeQuality
all individuals: 3103
bin: 6.25e1
variant carriers: 55

GenotypeQuality
all individuals: 2547
bin: 9.25e1
variant carriers: 37

GenotypeQuality
all individuals: 401
bin: 3.25e1
variant carriers: 45

GenotypeQuality
all individuals: 2606
bin: 7.75e1
variant carriers: 39

Latino
type: Population
allele count: 28
allele frequency: 2.428026361429067e-3
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.118765947575968e-4
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 59
allele frequency: 9.00763358778626e-3
allele num: 6550
num of homozygotes: 0

African
type: Population
allele count: 58
allele frequency: 5.796522086747951e-3
allele num: 10006
num of homozygotes: 0

South Asian
type: Population
allele count: 61
allele frequency: 3.705503584011663e-3
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 886
allele frequency: 1.35065093447971e-2
allele num: 65598
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.325942350332594e-3
allele num: 902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.112e0

QD
type: SiteQuality
SIO_000300: 6.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

FS
type: SiteQuality
SIO_000300: 1.0993e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.66e-2

MQ
type: SiteQuality
SIO_000300: 6.022e1

DP
type: SiteQuality
SIO_000300: 3.39237e6

GenotypeQuality
all individuals: 483
bin: 2.25e1
variant carriers: 96

GenotypeQuality
all individuals: 40264
bin: 9.75e1
variant carriers: 14437

GenotypeQuality
all individuals: 244
bin: 4.75e1
variant carriers: 98

GenotypeQuality
all individuals: 170
bin: 1.25e1
variant carriers: 130

GenotypeQuality
all individuals: 320
bin: 2.75e1
variant carriers: 109

GenotypeQuality
all individuals: 228
bin: 5.25e1
variant carriers: 125

GenotypeQuality
all individuals: 3103
bin: 6.25e1
variant carriers: 115

GenotypeQuality
all individuals: 385
bin: 3.75e1
variant carriers: 102

GenotypeQuality
all individuals: 2398
bin: 6.75e1
variant carriers: 100

GenotypeQuality
all individuals: 2606
bin: 7.75e1
variant carriers: 153

South Asian
type: Population
allele count: 1377
allele frequency: 8.364718746203377e-2
allele num: 16462
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 1097
allele frequency: 1.674809160305344e-1
allele num: 6550
num of homozygotes: 29

African
type: Population
allele count: 1214
allele frequency: 1.213272036777933e-1
allele num: 10006
num of homozygotes: 6

Latino
type: Population
allele count: 704
allele frequency: 6.104751994450226e-2
allele num: 11532
num of homozygotes: 2

East Asian
type: Population
allele count: 4
allele frequency: 4.639294827186268e-4
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11680
allele frequency: 1.780542089697857e-1
allele num: 65598
num of homozygotes: 123

Other
type: Population
allele count: 111
allele frequency: 1.23059866962306e-1
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

VQSLOD
type: SiteQuality
SIO_000300: -1.112e0

DP
type: SiteQuality
SIO_000300: 3.39237e6

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

MQ
type: SiteQuality
SIO_000300: 6.022e1

FS
type: SiteQuality
SIO_000300: 1.0993e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.66e-2

QD
type: SiteQuality
SIO_000300: 6.99e0

GenotypeQuality
all individuals: 262
bin: 4.25e1
variant carriers: 6

GenotypeQuality
all individuals: 165
bin: 7.5e0
variant carriers: 9

GenotypeQuality
all individuals: 175
bin: 2.5e0
variant carriers: 19

GenotypeQuality
all individuals: 2626
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2398
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2606
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3103
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1979
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 2547
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2012
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.995802518488907e-4
allele num: 10006
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.106870229007634e-4
allele num: 6550
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.037298019681691e-4
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 67
allele frequency: 1.021372602823257e-3
allele num: 65598
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.325942350332594e-3
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0993e1

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.66e-2

QD
type: SiteQuality
SIO_000300: 6.99e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

DP
type: SiteQuality
SIO_000300: 3.39237e6

VQSLOD
type: SiteQuality
SIO_000300: -1.112e0

MQ
type: SiteQuality
SIO_000300: 6.022e1

GenotypeQuality
all individuals: 296
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2417
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3221
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3142
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2964
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.686587908269631e-5
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e0

QD
type: SiteQuality
SIO_000300: 4.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 2.266e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.154e0

DP
type: SiteQuality
SIO_000300: 3.453305e6

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.9e0

MQ
type: SiteQuality
SIO_000300: 5.996e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.142e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 3771
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.50558692779046e-5
allele num: 66584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

QD
type: SiteQuality
SIO_000300: 1.688e1

DP
type: SiteQuality
SIO_000300: 3.443166e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

FS
type: SiteQuality
SIO_000300: 8.885e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.277e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.489e0

MQRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.762e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.879999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.23e-1

DP
type: SiteQuality
SIO_000300: 3.448248e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.24e1

MQ
type: SiteQuality
SIO_000300: 5.877e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2528
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 3.90625e-4
allele num: 10240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.23e-1

DP
type: SiteQuality
SIO_000300: 3.448248e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.19e-1

MQ
type: SiteQuality
SIO_000300: 5.877e1

FS
type: SiteQuality
SIO_000300: 6.879999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.63e0

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.24e1

GenotypeQuality
all individuals: 2528
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37979
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 2371
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.682e0

VQSLOD
type: SiteQuality
SIO_000300: 4.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.31e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 3.448861e6

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4490
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 37983
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variant carriers: 9

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 9
allele frequency: 8.736167734420501e-4
allele num: 10302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.425e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

DP
type: SiteQuality
SIO_000300: 3.45053e6

FS
type: SiteQuality
SIO_000300: 2.259e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00048007681229e-5
allele num: 66656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.393e0

DP
type: SiteQuality
SIO_000300: 3.451076e6

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

QD
type: SiteQuality
SIO_000300: 9.77e0

MQ
type: SiteQuality
SIO_000300: 5.998e1

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: -6.12e-1

QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.686168151879117e-5
allele num: 10324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.395e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.811e0

DP
type: SiteQuality
SIO_000300: 3.451804e6

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2384
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GenotypeQuality
all individuals: 2533
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e0

DP
type: SiteQuality
SIO_000300: 3.453019e6

FS
type: SiteQuality
SIO_000300: 4.062e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.016e0

MQRankSum
type: SiteQuality
SIO_000300: -3.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
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SIO_000300: -2.6e-2

QD
type: SiteQuality
SIO_000300: 8.3e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4653
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.281e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.45e-1

DP
type: SiteQuality
SIO_000300: 3.453271e6

FS
type: SiteQuality
SIO_000300: 1.0495e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -5.255e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.73e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.45362e6

MQ
type: SiteQuality
SIO_000300: 6.026e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.017e-1

QD
type: SiteQuality
SIO_000300: 9.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.298e0

MQRankSum
type: SiteQuality
SIO_000300: 9.66e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.502e0

QD
type: SiteQuality
SIO_000300: 1.458e1

MQRankSum
type: SiteQuality
SIO_000300: -6.28e-1

DP
type: SiteQuality
SIO_000300: 3.453805e6

FS
type: SiteQuality
SIO_000300: 8.67e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

FS
type: SiteQuality
SIO_000300: 2.764e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.575e0

MQRankSum
type: SiteQuality
SIO_000300: -3.49e-1

DP
type: SiteQuality
SIO_000300: 3.454507e6

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.61e-1

DP
type: SiteQuality
SIO_000300: 3.455058e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.04e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.3e-2

QD
type: SiteQuality
SIO_000300: 1.078e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.58e-1

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.311e0

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.016e1

MQRankSum
type: SiteQuality
SIO_000300: 2.47e-1

DP
type: SiteQuality
SIO_000300: 3.455106e6

QD
type: SiteQuality
SIO_000300: 9.6e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.997512064986062e-5
allele num: 66722
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16510
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.979e1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

South Asian
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

Other
type: Population
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allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

InbreedingCoeff
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DP
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.211387038158692e-4
allele num: 16510
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African
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allele frequency: 0.0e0
allele num: 10398
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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BaseQRankSum
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SIO_000300: 3.3e-1

ReadPosRankSum
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SIO_000300: 3.98e-1

DP
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FS
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele num: 8654
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66726
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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MQ
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FS
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 5.994664748373947e-5
allele num: 66726
num of homozygotes: 0

African
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allele frequency: 9.615384615384615e-5
allele num: 10400
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South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
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DP
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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QD
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VQSLOD
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ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 5.991e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.68e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 8
allele frequency: 1.198897014746433e-4
allele num: 66728
num of homozygotes: 0

Other
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allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 32
allele frequency: 4.838221953432114e-3
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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MQ
type: SiteQuality
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MQRankSum
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FS
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DP
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

BaseQRankSum
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SIO_000300: -1.079e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 11
allele frequency: 1.271088513981974e-3
allele num: 8654
num of homozygotes: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQ
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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QD
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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QD
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ReadPosRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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FS
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MQRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 5.450581395348837e-4
allele num: 16512
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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ReadPosRankSum
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BaseQRankSum
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QD
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DP
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MQ
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FS
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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African
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allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
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ClippingRankSum
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QD
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DP
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FS
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 3.303964757709251e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.847380410022779e-4
allele num: 66728
num of homozygotes: 0

African
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allele count: 1529
allele frequency: 1.469344608879493e-1
allele num: 10406
num of homozygotes: 107

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 65
allele frequency: 5.614095698738988e-3
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.933e1

DP
type: SiteQuality
SIO_000300: 3.536257e6

VQSLOD
type: SiteQuality
SIO_000300: 5.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.166e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

QD
type: SiteQuality
SIO_000300: 1.624e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.157e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.75e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3386
bin: 9.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.68e0

VQSLOD
type: SiteQuality
SIO_000300: -3.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.07e1

MQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

DP
type: SiteQuality
SIO_000300: 3.463102e6

MQ
type: SiteQuality
SIO_000300: 5.917e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.094e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.188e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.569e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 3.27e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.604e0

FS
type: SiteQuality
SIO_000300: 2.614e0

DP
type: SiteQuality
SIO_000300: 3.463028e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

VQSLOD
type: SiteQuality
SIO_000300: -6.4e-2

FS
type: SiteQuality
SIO_000300: 3.363e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 3.462984e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e0

QD
type: SiteQuality
SIO_000300: 1.107e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 19

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.548038010731737e-4
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.83e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

VQSLOD
type: SiteQuality
SIO_000300: 4.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

QD
type: SiteQuality
SIO_000300: 1.334e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.63e-1

DP
type: SiteQuality
SIO_000300: 3.463739e6

GenotypeQuality
all individuals: 2365
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 84

GenotypeQuality
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GenotypeQuality
all individuals: 3124
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 80
allele frequency: 1.199076710932582e-3
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.467249e6

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.49e0

QD
type: SiteQuality
SIO_000300: 1.363e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.379e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.929e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.508e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 21

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 8
allele frequency: 4.844961240310077e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 10
allele frequency: 1.101321585903084e-2
allele num: 908
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.997181324777355e-5
allele num: 66698
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 9.660000000000001e-2

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 5.63e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.5e0

VQSLOD
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.4474e1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.9e1

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.16e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4446
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.029201502483945e-4
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.535e0

VQSLOD
type: SiteQuality
SIO_000300: 3.44e0

DP
type: SiteQuality
SIO_000300: 3.462304e6

MQ
type: SiteQuality
SIO_000300: 5.692e1

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

QD
type: SiteQuality
SIO_000300: 1.731e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-2

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1875
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2606
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 43793
bin: 9.75e1
variant carriers: 18195

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 92
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3292
bin: 6.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2320
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2366
bin: 6.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 512
allele frequency: 7.741155125491382e-2
allele num: 6614
num of homozygotes: 24

Latino
type: Population
allele count: 4395
allele frequency: 3.798617113223855e-1
allele num: 11570
num of homozygotes: 884

Other
type: Population
allele count: 115
allele frequency: 1.27212389380531e-1
allele num: 904
num of homozygotes: 13

African
type: Population
allele count: 4047
allele frequency: 3.892094633583381e-1
allele num: 10398
num of homozygotes: 785

South Asian
type: Population
allele count: 2428
allele frequency: 1.470623864324652e-1
allele num: 16510
num of homozygotes: 192

European (Non-Finnish)
type: Population
allele count: 7691
allele frequency: 1.153592320383981e-1
allele num: 66670
num of homozygotes: 474

East Asian
type: Population
allele count: 1566
allele frequency: 1.810404624277457e-1
allele num: 8650
num of homozygotes: 142

FS
type: SiteQuality
SIO_000300: 1.118e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.99e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.93e0

QD
type: SiteQuality
SIO_000300: 1.64e1

DP
type: SiteQuality
SIO_000300: 4.208318e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4239
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2144
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3657
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3400
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.844961240310077e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.45e0

MQRankSum
type: SiteQuality
SIO_000300: -5.499e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e-1

DP
type: SiteQuality
SIO_000300: 3.30474e6

VQSLOD
type: SiteQuality
SIO_000300: -4.787e-1

FS
type: SiteQuality
SIO_000300: 7.939e0

MQ
type: SiteQuality
SIO_000300: 5.208e1

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4232
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3400
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3100
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38455
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2400
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.5036768016328e-5
allele num: 66634
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.3e-1

DP
type: SiteQuality
SIO_000300: 3.304833e6

MQ
type: SiteQuality
SIO_000300: 5.981e1

FS
type: SiteQuality
SIO_000300: 3.466e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.507e0

QD
type: SiteQuality
SIO_000300: 1.039e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 3035
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3658
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3399
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2402
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4175
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66608
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.868e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.234e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-2

DP
type: SiteQuality
SIO_000300: 3.303857e6

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.914e1

QD
type: SiteQuality
SIO_000300: 1.25e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.072e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.84e-1

GenotypeQuality
all individuals: 2402
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3096
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variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 3658
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 4161
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3398
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 2138
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38450
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501411326647048e-5
allele num: 66604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.73e-1

FS
type: SiteQuality
SIO_000300: 1.697e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

MQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.421e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.593e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.2e-1

DP
type: SiteQuality
SIO_000300: 3.303668e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.64e-1

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38451
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4166
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variant carriers: 0

GenotypeQuality
all individuals: 3658
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3032
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3398
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3095
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 2402
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.303383e6

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

FS
type: SiteQuality
SIO_000300: 1.732e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.228e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

VQSLOD
type: SiteQuality
SIO_000300: 9.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.28e-1

QD
type: SiteQuality
SIO_000300: 1.393e1

GenotypeQuality
all individuals: 3095
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3996
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3653
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2397
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3014
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3391
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2129
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38473
bin: 9.75e1
variant carriers: 194

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.239341085271318e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 3.607286719172729e-4
allele num: 66532
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 1.123207188526007e-3
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 150
allele frequency: 1.446480231436837e-2
allele num: 10370
num of homozygotes: 1

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

DP
type: SiteQuality
SIO_000300: 3.301394e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.45e-1

FS
type: SiteQuality
SIO_000300: 3.882e0

QD
type: SiteQuality
SIO_000300: 1.212e1

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2133
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3012
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
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GenotypeQuality
all individuals: 2399
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3404
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503352476021528e-5
allele num: 66518
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.46e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e-1

FS
type: SiteQuality
SIO_000300: 1.247e0

DP
type: SiteQuality
SIO_000300: 3.296236e6

QD
type: SiteQuality
SIO_000300: 1.035e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-1

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 132
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2129
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3393
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38398
bin: 9.75e1
variant carriers: 54

GenotypeQuality
all individuals: 2393
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.659969088098918e-5
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 37
allele frequency: 5.563407812828918e-4
allele num: 66506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 12
allele frequency: 1.814333232537043e-3
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

VQSLOD
type: SiteQuality
SIO_000300: 3.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

FS
type: SiteQuality
SIO_000300: 2.271e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.523e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 1.251e1

DP
type: SiteQuality
SIO_000300: 3.294053e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

GenotypeQuality
all individuals: 166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3438
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38383
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3082
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3668
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2393
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66470
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 3.065e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.16e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 1.15e1

DP
type: SiteQuality
SIO_000300: 3.289499e6

GenotypeQuality
all individuals: 173
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3076
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 3380
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2877
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variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.756e0

VQSLOD
type: SiteQuality
SIO_000300: -1.561e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

MQ
type: SiteQuality
SIO_000300: 5.773e1

QD
type: SiteQuality
SIO_000300: 2.179e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 3.289423e6

GenotypeQuality
all individuals: 114
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2785
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2389
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variant carriers: 0

GenotypeQuality
all individuals: 355
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variant carriers: 0

GenotypeQuality
all individuals: 3378
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38381
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3665
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2103
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.469010175763182e-4
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.385e0

QD
type: SiteQuality
SIO_000300: 1.358e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 3.288348e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.16e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.804e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.045e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

MQ
type: SiteQuality
SIO_000300: 5.885e1

GenotypeQuality
all individuals: 299
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38385
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3313
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2790
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3069
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2110
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

QD
type: SiteQuality
SIO_000300: 1.501e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.294e0

VQSLOD
type: SiteQuality
SIO_000300: -1.174e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.856e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

DP
type: SiteQuality
SIO_000300: 3.288262e6

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3456
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8746
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2651
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66428
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.202462e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.083e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e0

MQRankSum
type: SiteQuality
SIO_000300: -9.5e-1

QD
type: SiteQuality
SIO_000300: 1.964e1

VQSLOD
type: SiteQuality
SIO_000300: -1.565e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3376
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2333
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24649
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2620
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.083465141744738e-5
allele num: 16438
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.05e-1

QD
type: SiteQuality
SIO_000300: 1.286e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.29e-1

DP
type: SiteQuality
SIO_000300: 2.210588e6

MQRankSum
type: SiteQuality
SIO_000300: -5.649999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.64e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2595
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26126
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
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GenotypeQuality
all individuals: 913
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12285
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 366
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3346
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503895088278642e-5
allele num: 66494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.082725060827251e-5
allele num: 16440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.038e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

DP
type: SiteQuality
SIO_000300: 2.218707e6

VQSLOD
type: SiteQuality
SIO_000300: 3.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.573e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.124e1

GenotypeQuality
all individuals: 2596
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12289
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1378
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
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variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2289
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.274918868799258e-3
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.801e0

DP
type: SiteQuality
SIO_000300: 2.233387e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.17e0

FS
type: SiteQuality
SIO_000300: 9.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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InbreedingCoeff
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SIO_000300: 2.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.95e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 88

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 71
allele frequency: 4.313487241798299e-3
allele num: 16460
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.402185989250218e-4
allele num: 66606
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.75e-1

DP
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SIO_000300: 2.238636e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.53e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

BaseQRankSum
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SIO_000300: -3.132e0

QD
type: SiteQuality
SIO_000300: 1.334e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.154956689124158e-3
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66606
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.597852441981296e-4
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.132e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 1.334e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.75e-1

DP
type: SiteQuality
SIO_000300: 2.238636e6

VQSLOD
type: SiteQuality
SIO_000300: 5.53e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.924557351809084e-4
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 8.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.95e-1

DP
type: SiteQuality
SIO_000300: 2.238157e6

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.079e0

QD
type: SiteQuality
SIO_000300: 1.49e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999220202747286e-5
allele num: 66684
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 906
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VQSLOD
type: SiteQuality
SIO_000300: 5.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

FS
type: SiteQuality
SIO_000300: 7.93e-1

QD
type: SiteQuality
SIO_000300: 1.458e1

DP
type: SiteQuality
SIO_000300: 2.241081e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

African
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allele count: 21
allele frequency: 2.019230769230769e-3
allele num: 10400
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele num: 11560
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FS
type: SiteQuality
SIO_000300: 1.58e0

QD
type: SiteQuality
SIO_000300: 1.421e1

DP
type: SiteQuality
SIO_000300: 2.241814e6

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.997781641585227e-5
allele num: 66716
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

MQ
type: SiteQuality
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DP
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FS
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