6-31692569-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692569
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692569
    reference: chr 6
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.569G>A
  hgvsp: ENSP00000419306.1:p.Arg190Lys
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.588G>A
  hgvsp: ENST00000375809.3:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.569G>A
  hgvsp: ENSP00000364964.2:p.Arg190Lys
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.588G>A
  hgvsp: ENST00000375810.4:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.913G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.437G>A
  hgvsp: ENSP00000364972.3:p.Arg146Lys
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*52G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.706G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.456G>A
  hgvsp: ENST00000375804.2:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.497G>A
  hgvsp: ENSP00000364963.2:p.Arg166Lys
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7121
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6075
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4867
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4159
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg190Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

6-31692573-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692573
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692573
    reference: chr 6
allele count: 26
allele frequency: 2.143410660994872e-4
allele num: 121302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.592A>G
  hgvsp: ENSP00000364968.4:p.Ser198Gly
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.573A>G
  hgvsp: ENST00000480039.1:c.573A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.460A>G
  hgvsp: ENSP00000364962.2:p.Ser154Gly
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.710A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.573A>G
  hgvsp: ENST00000375806.2:c.573A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.592A>G
  hgvsp: ENSP00000364967.3:p.Ser198Gly
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*56A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.917A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.441A>G
  hgvsp: ENST00000375814.3:c.441A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.501A>G
  hgvsp: ENST00000375805.2:c.501A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7381
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser198Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

6-31692579-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692579
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692579
    reference: chr 6
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.466G>C
  hgvsp: ENSP00000364962.2:p.Gly156Arg
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.579G>C
  hgvsp: ENSP00000364964.2:p.Lys193Asn
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.598G>C
  hgvsp: ENSP00000364968.4:p.Gly200Arg
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.598G>C
  hgvsp: ENSP00000364967.3:p.Gly200Arg
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*62G>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.716G>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.923G>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.579G>C
  hgvsp: ENSP00000419306.1:p.Lys193Asn
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.507G>C
  hgvsp: ENSP00000364963.2:p.Lys169Asn
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.447G>C
  hgvsp: ENSP00000364972.3:p.Lys149Asn
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6076
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4867
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4332
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Lys193Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/6-31692598-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692598
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692598
    reference: chr 6
allele count: 1
allele frequency: 8.24905548314718e-6
allele num: 121226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.735C>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.617C>A
  hgvsp: ENSP00000364967.3:p.Ser206Tyr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.485C>A
  hgvsp: ENSP00000364962.2:p.Ser162Tyr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.598C>A
  hgvsp: ENSP00000364964.2:p.Pro200Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.526C>A
  hgvsp: ENSP00000364963.2:p.Pro176Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*81C>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.942C>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.598C>A
  hgvsp: ENSP00000419306.1:p.Pro200Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.617C>A
  hgvsp: ENSP00000364968.4:p.Ser206Tyr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.466C>A
  hgvsp: ENSP00000364972.3:p.Pro156Thr
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6076
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4869
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2881
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro200Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

6-31692602-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692602
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692602
    reference: chr 6
allele count: 2
allele frequency: 1.649919978881024e-5
allele num: 121218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.530G>A
  hgvsp: ENSP00000364963.2:p.Gly177Glu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.602G>A
  hgvsp: ENSP00000419306.1:p.Gly201Glu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.602G>A
  hgvsp: ENSP00000364964.2:p.Gly201Glu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.621G>A
  hgvsp: ENST00000375809.3:c.621G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.470G>A
  hgvsp: ENSP00000364972.3:p.Gly157Glu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*85G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.489G>A
  hgvsp: ENST00000375804.2:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.621G>A
  hgvsp: ENST00000375810.4:c.621G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.739G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.946G>A
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7686
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6077
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5655
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly201Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

6-31692604-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692604
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692604
    reference: chr 6
allele count: 1
allele frequency: 8.25000825000825e-6
allele num: 121212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.623G>A
  hgvsp: ENSP00000364968.4:p.Gly208Glu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.948G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.604G>A
  hgvsp: ENSP00000419306.1:p.Asp202Asn
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.472G>A
  hgvsp: ENSP00000364972.3:p.Asp158Asn
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.532G>A
  hgvsp: ENSP00000364963.2:p.Asp178Asn
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.604G>A
  hgvsp: ENSP00000364964.2:p.Asp202Asn
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.491G>A
  hgvsp: ENSP00000364962.2:p.Gly164Glu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.741G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.623G>A
  hgvsp: ENSP00000364967.3:p.Gly208Glu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*87G>A
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6078
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24696
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp202Asn
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

6-31692605-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692605
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692605
    reference: chr 6
allele count: 1
allele frequency: 8.25082508250825e-6
allele num: 121200
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.624A>G
  hgvsp: ENST00000375809.3:c.624A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.492A>G
  hgvsp: ENST00000375804.2:c.492A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.533A>G
  hgvsp: ENSP00000364963.2:p.Asp178Gly
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.742A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.605A>G
  hgvsp: ENSP00000419306.1:p.Asp202Gly
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.949A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.605A>G
  hgvsp: ENSP00000364964.2:p.Asp202Gly
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.624A>G
  hgvsp: ENST00000375810.4:c.624A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.473A>G
  hgvsp: ENSP00000364972.3:p.Asp158Gly
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*88A>G
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6078
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp202Gly
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

6-31692620-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692620
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692620
    reference: chr 6
allele count: 4
allele frequency: 3.302837137100769e-5
allele num: 121108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.964C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.757C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.548C>T
  hgvsp: ENSP00000364963.2:p.Pro183Leu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.639C>T
  hgvsp: ENST00000375809.3:c.639C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.620C>T
  hgvsp: ENSP00000419306.1:p.Pro207Leu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.620C>T
  hgvsp: ENSP00000364964.2:p.Pro207Leu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.488C>T
  hgvsp: ENSP00000364972.3:p.Pro163Leu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.639C>T
  hgvsp: ENST00000375810.4:c.639C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.507C>T
  hgvsp: ENST00000375804.2:c.507C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*103C>T
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6079
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6986
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro207Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

6-31692621-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692621
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692621
    reference: chr 6
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.549G>A
  hgvsp: ENST00000375805.2:c.549G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.640G>A
  hgvsp: ENSP00000364968.4:p.Gly214Ser
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.489G>A
  hgvsp: ENST00000375814.3:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.621G>A
  hgvsp: ENST00000375806.2:c.621G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.758G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.508G>A
  hgvsp: ENSP00000364962.2:p.Glu170Lys
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.965G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.621G>A
  hgvsp: ENST00000480039.1:c.621G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.640G>A
  hgvsp: ENSP00000364967.3:p.Glu214Lys
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*104G>A
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7678
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu170Lys
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

6-31692621-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692621
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692621
    reference: chr 6
allele count: 17
allele frequency: 1.403752146915048e-4
allele num: 121104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*104G>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.489G>T
  hgvsp: ENST00000375814.3:c.489G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.640G>T
  hgvsp: ENSP00000364967.3:p.Glu214Ter
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.549G>T
  hgvsp: ENST00000375805.2:c.549G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.621G>T
  hgvsp: ENST00000375806.2:c.621G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.640G>T
  hgvsp: ENSP00000364968.4:p.Gly214Cys
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.965G>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.621G>T
  hgvsp: ENST00000480039.1:c.621G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.758G>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.508G>T
  hgvsp: ENSP00000364962.2:p.Glu170Ter
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7376
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7678
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4870
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu170Ter
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-31692632-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692632
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692632
    reference: chr 6
allele count: 2
allele frequency: 1.652701340340787e-5
allele num: 121014
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.489+11G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.621+11G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.632G>A
  hgvsp: ENSP00000419306.1:p.Trp211Ter
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.640+11G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.965+11G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.758+11G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*104+11G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.508+11G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.651G>A
  hgvsp: ENSP00000364968.4:p.Met217Ile
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.549+11G>A
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5163
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6079
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4132
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Trp211Ter
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ

6-31692640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692640
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692640
    reference: chr 6
allele count: 1
allele frequency: 8.269930532583527e-6
allele num: 120920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.549+19G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.640G>A
  hgvsp: ENSP00000419306.1:p.Glu214Lys
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.640+19G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.965+19G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*104+19G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.659G>A
  hgvsp: ENSP00000364968.4:p.Gly220Glu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.621+19G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.489+19G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.508+19G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.758+19G>A
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6078
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4249
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2803
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu214Lys
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

6-31692640-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692640
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692641
    reference: chr 6
allele count: 3
allele frequency: 2.480979159775058e-5
allele num: 120920
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.549+21dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.489+21dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.758+21dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.642dupA
  hgvsp: ENSP00000419306.1:p.Gly215ArgfsTer3
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*104+21dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.661dupA
  hgvsp: ENSP00000364968.4:p.Arg221LysfsTer60
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.508+21dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.965+21dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.621+21dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.640+21dupA
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6078
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11443
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg221LysfsTer60
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-31692675-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692675
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692676
    reference: chr 6
allele count: 8343
allele frequency: 9.536382964131404e-2
allele num: 87486
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*36dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.509-61dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*23dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*105-61dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.966-61dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.550-61dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.759-61dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.622-61dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.641-61dupA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.490-61dupA
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 2.75e1
  variant carriers: 1134
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 6.25e1
  variant carriers: 260
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 1.75e1
  variant carriers: 370
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 2.25e1
  variant carriers: 731
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8753
  bin: 3.75e1
  variant carriers: 1489
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 7.25e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.25e1
  variant carriers: 738
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.5e0
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 251
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 4.25e1
  variant carriers: 1431
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 7390
  bin: 3.25e1
  variant carriers: 1493
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 5.75e1
  variant carriers: 404
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 4.75e1
  variant carriers: 980
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 6.75e1
  variant carriers: 181
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 3.25e1
  variant carriers: 228
genotype quality: GenotypeQuality
  all individuals: 3291
  bin: 7.5e0
  variant carriers: 433
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 1.25e1
  variant carriers: 392
num of homozygotes: 9
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/6-31692675-C-CAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692675
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692677
    reference: chr 6
allele count: 28
allele frequency: 3.200512081933109e-4
allele num: 87486
alternate allele: CAA
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*22_*23dupAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.622-62_622-61dupAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.966-62_966-61dupAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.509-62_509-61dupAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*105-62_*105-61dupAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.490-62_490-61dupAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*35_*36dupAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.759-62_759-61dupAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.550-62_550-61dupAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.641-62_641-61dupAA
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7390
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 8753
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2968
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/6-31692675-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692675
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692674
    reference: chr 6
allele count: 29759
allele frequency: 3.401572823080264e-1
allele num: 87486
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.966-61delA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.641-61delA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*105-61delA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*23delA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.759-61delA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*36delA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.509-61delA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.490-61delA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.622-61delA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.550-61delA
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 328
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 5.75e1
  variant carriers: 2344
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 6.25e1
  variant carriers: 1472
genotype depth: GenotypeDepth
  all individuals: 8753
  bin: 3.75e1
  variant carriers: 5310
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 2.25e1
  variant carriers: 1506
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 1.75e1
  variant carriers: 738
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.5e0
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 4.25e1
  variant carriers: 5172
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 231
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 2.75e1
  variant carriers: 2877
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 544
genotype depth: GenotypeDepth
  all individuals: 7390
  bin: 3.25e1
  variant carriers: 4309
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 4.75e1
  variant carriers: 4585
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 7.25e1
  variant carriers: 571
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 357
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.25e1
  variant carriers: 3350
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 6.75e1
  variant carriers: 882
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 6.25e1
  variant carriers: 1272
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 1.25e1
  variant carriers: 1330
genotype quality: GenotypeQuality
  all individuals: 7472
  bin: 2.5e0
  variant carriers: 1051
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: CA
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/6-31692675-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692675
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692673
    reference: chr 6
allele count: 217
allele frequency: 2.48039686349816e-3
allele num: 87486
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*105-62_*105-61delAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.509-62_509-61delAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.759-62_759-61delAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.490-62_490-61delAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*35_*36delAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.641-62_641-61delAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.622-62_622-61delAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.550-62_550-61delAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.966-62_966-61delAA
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*22_*23delAA
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 4.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 4.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 2.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 1.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 8753
  bin: 3.75e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 2.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7390
  bin: 3.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 5.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 1.25e1
  variant carriers: 46
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: CAA
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-31692675-CAAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692675
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692672
    reference: chr 6
allele count: 2
allele frequency: 2.28608005852365e-5
allele num: 87486
alternate allele: C
canonical: false
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8753
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5349
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2884
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2705
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1435
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7472
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2281
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16404
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3291
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2968
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 7.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 668
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 8.392077878482712e-5
  allele num: 11916
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5982
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8606
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: CAAA
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-31692676-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692676
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692676
    reference: chr 6
allele count: 2
allele frequency: 4.863813229571985e-4
allele num: 4112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.489+55A>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.508+55A>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.758+55A>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*104+55A>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*26A>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*13A>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.549+55A>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.640+55A>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.621+55A>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.965+55A>C
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

6-31692677-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692677
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692677
    reference: chr 6
allele count: 2
allele frequency: 7.541478129713424e-5
allele num: 26520
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.508+56A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.549+56A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.640+56A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.965+56A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.489+56A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.621+56A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*27A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*14A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.758+56A>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*104+56A>G
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4504
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5152
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5786
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38701
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

6-31692682-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692682
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692682
    reference: chr 6
allele count: 1
allele frequency: 8.434405627435435e-6
allele num: 118562
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*32A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.549+61A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.640+61A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.489+61A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.621+61A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.965+61A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.508+61A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*19A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.758+61A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*104+61A>T
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1862
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

6-31692695-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692695
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692695
    reference: chr 6
allele count: 1
allele frequency: 8.491559389966374e-6
allele num: 117764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*32C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.966-52C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*45C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.641-52C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*105-52C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.622-52C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.759-52C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.550-52C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.509-52C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.490-52C>T
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

6-31692701-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692701
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692701
    reference: chr 6
allele count: 1
allele frequency: 8.511362669163334e-6
allele num: 117490
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*51G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*105-46G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.622-46G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.509-46G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*38G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.550-46G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.641-46G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.759-46G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.490-46G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.966-46G>A
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2732
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

6-31692712-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692712
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692712
    reference: chr 6
allele count: 1
allele frequency: 8.523114687031229e-6
allele num: 117328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.550-35G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*62G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*49G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.641-35G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.759-35G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.966-35G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.622-35G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*105-35G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.509-35G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.490-35G>A
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2807
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2715
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

6-31692724-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692724
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692724
    reference: chr 6
allele count: 1
allele frequency: 8.543357539513029e-6
allele num: 117050
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.509-23T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*74T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.759-23T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.550-23T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.490-23T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.622-23T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*61T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.966-23T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*105-23T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.641-23T>C
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

6-31692729-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692729
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692729
    reference: chr 6
allele count: 8
allele frequency: 6.861298843871145e-5
allele num: 116596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*66C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.641-18C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*79C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.490-18C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.509-18C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.550-18C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*105-18C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.759-18C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.622-18C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.966-18C>T
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13578
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8280
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9449
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2816
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP

6-31692731-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692731
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692731
    reference: chr 6
allele count: 1
allele frequency: 8.576182226719954e-6
allele num: 116602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.966-16C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.550-16C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*81C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.641-16C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.509-16C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.622-16C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.759-16C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*68C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*105-16C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.490-16C>T
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-31692749-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692749
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692749
    reference: chr 6
allele count: 1
allele frequency: 8.608222574202878e-6
allele num: 116168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.761C>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.643C>A
  hgvsp: ENSP00000364967.3:p.Pro215Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.968C>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.511C>A
  hgvsp: ENSP00000364962.2:p.Pro171Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.624C>A
  hgvsp: ENSP00000364964.2:p.Ser208Arg
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*107C>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.552C>A
  hgvsp: ENSP00000364963.2:p.Ser184Arg
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*99C>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.492C>A
  hgvsp: ENSP00000364972.3:p.Ser164Arg
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000419306
  ensembl transcript: ENST00000480039
  gene symbol: C6orf25
  hgvsc: ENST00000480039.1:c.*86C>A
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13565
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser208Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

6-31692757-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692757
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692757
    reference: chr 6
allele count: 1
allele frequency: 8.617718028266114e-6
allele num: 116040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*115A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.519A>T
  hgvsp: ENST00000375804.2:c.519A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.976A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*107A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.560A>T
  hgvsp: ENSP00000364963.2:p.Tyr187Phe
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.632A>T
  hgvsp: ENSP00000364964.2:p.Tyr211Phe
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.500A>T
  hgvsp: ENSP00000364972.3:p.Tyr167Phe
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.769A>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.651A>T
  hgvsp: ENST00000375809.3:c.651A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2802
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr211Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS

6-31692758-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692758
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692758
    reference: chr 6
allele count: 1
allele frequency: 8.618757864616552e-6
allele num: 116026
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*116T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.501T>C
  hgvsp: ENST00000375814.3:c.501T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.652T>C
  hgvsp: ENSP00000364967.3:p.Cys218Arg
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.633T>C
  hgvsp: ENST00000375806.2:c.633T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.770T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.520T>C
  hgvsp: ENSP00000364962.2:p.Cys174Arg
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.561T>C
  hgvsp: ENST00000375805.2:c.561T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.977T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*108T>C
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9430
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys218Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

6-31692759-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692759
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692759
    reference: chr 6
allele count: 3
allele frequency: 2.5858948057993e-5
allele num: 116014
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.771G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*109G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.978G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.502G>A
  hgvsp: ENSP00000364972.3:p.Ala168Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.562G>A
  hgvsp: ENSP00000364963.2:p.Ala188Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*117G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.634G>A
  hgvsp: ENSP00000364964.2:p.Ala212Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.653G>A
  hgvsp: ENSP00000364967.3:p.Cys218Tyr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.521G>A
  hgvsp: ENSP00000364962.2:p.Cys174Tyr
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala212Thr
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

6-31692761-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692761
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692761
    reference: chr 6
allele count: 1
allele frequency: 8.619797951936006e-6
allele num: 116012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*119G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.773G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.636G>A
  hgvsp: ENST00000375806.2:c.636G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.564G>A
  hgvsp: ENST00000375805.2:c.564G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.980G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.523G>A
  hgvsp: ENSP00000364962.2:p.Gly175Arg
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.655G>A
  hgvsp: ENSP00000364967.3:p.Gly219Arg
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.504G>A
  hgvsp: ENST00000375814.3:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*111G>A
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1045
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly219Arg
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD

6-31692773-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692773
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692773
    reference: chr 6
allele count: 1
allele frequency: 8.628276588034307e-6
allele num: 115898
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*123T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.667T>C
  hgvsp: ENSP00000364967.3:p.Ser223Pro
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.576T>C
  hgvsp: ENST00000375805.2:c.576T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.535T>C
  hgvsp: ENSP00000364962.2:p.Ser179Pro
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.785T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.516T>C
  hgvsp: ENST00000375814.3:c.516T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.648T>C
  hgvsp: ENST00000375806.2:c.648T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.992T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*131T>C
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2788
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser223Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

6-31692777-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692777
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692777
    reference: chr 6
allele count: 4
allele frequency: 3.452859831155154e-5
allele num: 115846
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.539G>A
  hgvsp: ENSP00000364962.2:p.Ser180Asn
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.996G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*127G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.520G>A
  hgvsp: ENSP00000364972.3:p.Ala174Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.789G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*135G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.652G>A
  hgvsp: ENSP00000364964.2:p.Ala218Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.580G>A
  hgvsp: ENSP00000364963.2:p.Ala194Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.671G>A
  hgvsp: ENSP00000364967.3:p.Ser224Asn
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala218Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

6-31692782-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692782
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692782
    reference: chr 6
allele count: 1
allele frequency: 8.638264054455616e-6
allele num: 115764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*132C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.657C>T
  hgvsp: ENST00000375806.2:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.1001C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.525C>T
  hgvsp: ENST00000375814.3:c.525C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*140C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.585C>T
  hgvsp: ENST00000375805.2:c.585C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.544C>T
  hgvsp: ENSP00000364962.2:p.Gln182Ter
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.676C>T
  hgvsp: ENSP00000364967.3:p.Gln226Ter
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.794C>T
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln226Ter
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

6-31692788-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692788
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692788
    reference: chr 6
allele count: 1
allele frequency: 8.639308855291577e-6
allele num: 115750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.591G>A
  hgvsp: ENST00000375805.2:c.591G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.1007G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.663G>A
  hgvsp: ENST00000375806.2:c.663G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.682G>A
  hgvsp: ENSP00000364967.3:p.Ala228Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.800G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*146G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.550G>A
  hgvsp: ENSP00000364962.2:p.Ala184Thr
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*138G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.531G>A
  hgvsp: ENST00000375814.3:c.531G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1285
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala228Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

6-31692792-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692792
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692792
    reference: chr 6
allele count: 3
allele frequency: 2.591568762957844e-5
allele num: 115760
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.667C>T
  hgvsp: ENSP00000364964.2:p.Arg223Cys
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.595C>T
  hgvsp: ENSP00000364963.2:p.Arg199Cys
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.554C>T
  hgvsp: ENSP00000364962.2:p.Pro185Leu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.1011C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.804C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.535C>T
  hgvsp: ENSP00000364972.3:p.Arg179Cys
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*142C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.686C>T
  hgvsp: ENSP00000364967.3:p.Pro229Leu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*150C>T
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36636
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg223Cys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-31692793-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692793
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692793
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 115774
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.536G>A
  hgvsp: ENSP00000364972.3:p.Arg179His
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.668G>A
  hgvsp: ENSP00000364964.2:p.Arg223His
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.687G>A
  hgvsp: ENST00000375809.3:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*151G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.555G>A
  hgvsp: ENST00000375804.2:c.555G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.596G>A
  hgvsp: ENSP00000364963.2:p.Arg199His
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.805G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.1012G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*143G>A
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 28624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8599
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg223His
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

6-31692795-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692795
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692795
    reference: chr 6
allele count: 2
allele frequency: 1.727384222072516e-5
allele num: 115782
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.538C>T
  hgvsp: ENSP00000364972.3:p.Arg180Trp
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.807C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*145C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.670C>T
  hgvsp: ENSP00000364964.2:p.Arg224Trp
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.689C>T
  hgvsp: ENSP00000364967.3:p.Pro230Leu
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*153C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.598C>T
  hgvsp: ENSP00000364963.2:p.Arg200Trp
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.1014C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.557C>T
  hgvsp: ENSP00000364962.2:p.Pro186Leu
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg224Trp
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

6-31692796-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692796
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692796
    reference: chr 6
allele count: 1
allele frequency: 8.637667138859137e-6
allele num: 115772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.808G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.599G>A
  hgvsp: ENSP00000364963.2:p.Arg200Gln
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.671G>A
  hgvsp: ENSP00000364964.2:p.Arg224Gln
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.558G>A
  hgvsp: ENST00000375804.2:c.558G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*146G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*154G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.1015G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.690G>A
  hgvsp: ENST00000375809.3:c.690G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.539G>A
  hgvsp: ENSP00000364972.3:p.Arg180Gln
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg224Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

6-31692796-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692796
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692796
    reference: chr 6
allele count: 4
allele frequency: 3.455066855543655e-5
allele num: 115772
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.690G>C
  hgvsp: ENST00000375809.3:c.690G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.558G>C
  hgvsp: ENST00000375804.2:c.558G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*146G>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.539G>C
  hgvsp: ENSP00000364972.3:p.Arg180Pro
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.671G>C
  hgvsp: ENSP00000364964.2:p.Arg224Pro
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*154G>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.808G>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.599G>C
  hgvsp: ENSP00000364963.2:p.Arg200Pro
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.1015G>C
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9396
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg224Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP

6-31692808-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692808
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692808
    reference: chr 6
allele count: 3
allele frequency: 2.591434445346648e-5
allele num: 115766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.702C>T
  hgvsp: ENST00000375809.3:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.611C>T
  hgvsp: ENSP00000364963.2:p.Ala204Val
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*166C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*158C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.683C>T
  hgvsp: ENSP00000364964.2:p.Ala228Val
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.551C>T
  hgvsp: ENSP00000364972.3:p.Ala184Val
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.570C>T
  hgvsp: ENST00000375804.2:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.820C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.1027C>T
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36802
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala228Val
num of homozygotes: 1
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

6-31692809-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692809
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692809
    reference: chr 6
allele count: 1
allele frequency: 8.638711795297085e-6
allele num: 115758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.703G>A
  hgvsp: ENSP00000364967.3:p.Gly235Arg
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.821G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.571G>A
  hgvsp: ENSP00000364962.2:p.Gly191Arg
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.552G>A
  hgvsp: ENST00000375814.3:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.684G>A
  hgvsp: ENST00000375806.2:c.684G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.612G>A
  hgvsp: ENST00000375805.2:c.612G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000420355
  ensembl transcript: ENST00000485548
  gene symbol: C6orf25
  hgvsc: ENST00000485548.1:c.*167G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000460663
  gene symbol: C6orf25
  hgvsc: ENST00000460663.1:n.1028G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*159G>A
  variant of: http://identifiers.org/hgnc/13937
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2782
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly235Arg
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP

6-31692822-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692822
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692822
    reference: chr 6
allele count: 2
allele frequency: 1.72839932938106e-5
allele num: 115714
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.697G>C
  hgvsp: ENSP00000364964.2:p.Ala233Pro
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.565G>C
  hgvsp: ENSP00000364972.3:p.Ala189Pro
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.*2G>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.834G>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*172G>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.*2G>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.625G>C
  hgvsp: ENSP00000364963.2:p.Ala209Pro
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2621
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9380
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36801
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala233Pro
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

6-31692827-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692827
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692827
    reference: chr 6
allele count: 1
allele frequency: 8.645881966419394e-6
allele num: 115662
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.*7C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*177C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.*7C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.570C>T
  hgvsp: ENST00000375814.3:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.630C>T
  hgvsp: ENST00000375805.2:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.702C>T
  hgvsp: ENST00000375806.2:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.839C>T
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9365
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser234Ser
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

6-31692829-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692829
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692829
    reference: chr 6
allele count: 3
allele frequency: 2.594033722438392e-5
allele num: 115650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.572C>T
  hgvsp: ENSP00000364972.3:p.Thr191Ile
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.632C>T
  hgvsp: ENSP00000364963.2:p.Thr211Ile
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*179C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.*9C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.*9C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.841C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.704C>T
  hgvsp: ENSP00000364964.2:p.Thr235Ile
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8635
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2777
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2618
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36776
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr235Ile
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

6-31692848-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692848
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692848
    reference: chr 6
allele count: 1
allele frequency: 8.672876446202148e-6
allele num: 115302
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364968
  ensembl transcript: ENST00000375810
  gene symbol: C6orf25
  hgvsc: ENST00000375810.4:c.*198T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364963
  ensembl transcript: ENST00000375805
  gene symbol: C6orf25
  hgvsc: ENST00000375805.2:c.651T>C
  hgvsp: ENST00000375805.2:c.651T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364972
  ensembl transcript: ENST00000375814
  gene symbol: C6orf25
  hgvsc: ENST00000375814.3:c.591T>C
  hgvsp: ENST00000375814.3:c.591T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.723T>C
  hgvsp: ENST00000375806.2:c.723T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204420
  ensembl transcript: ENST00000471545
  gene symbol: C6orf25
  hgvsc: ENST00000471545.1:n.860T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364962
  ensembl transcript: ENST00000375804
  gene symbol: C6orf25
  hgvsc: ENST00000375804.2:c.*28T>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.*28T>C
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9280
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36180
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val241Val
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP

6-31692853-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692853
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692853
    reference: chr 6
allele count: 1
allele frequency: 8.688248275382717e-6
allele num: 115098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.*33G>A
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.*2G>A
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 35646
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 2775
  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8492
  num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

6-31692874-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692874
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692874
    reference: chr 6
allele count: 3
allele frequency: 2.641635700825952e-5
allele num: 113566
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.*23T>G
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.*54T>G
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2009
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1474
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11258
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

6-31692886-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692886
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692886
    reference: chr 6
allele count: 1
allele frequency: 8.885413704862098e-6
allele num: 112544
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.*66G>C
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.*35G>C
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
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genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2249
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 822
  num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

6-31692896-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692896
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692895
    reference: chr 6
allele count: 1
allele frequency: 9.035545837324032e-6
allele num: 110674
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.*49delC
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.*80delC
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2917
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8090
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: TC
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-31692897-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31692897
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31692897
    reference: chr 6
allele count: 2
allele frequency: 1.807599146813203e-5
allele num: 110644
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364964
  ensembl transcript: ENST00000375806
  gene symbol: C6orf25
  hgvsc: ENST00000375806.2:c.*46C>T
  variant of: http://identifiers.org/hgnc/13937
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000204420
  ensembl protein: ENSP00000364967
  ensembl transcript: ENST00000375809
  gene symbol: C6orf25
  hgvsc: ENST00000375809.3:c.*77C>T
  variant of: http://identifiers.org/hgnc/13937
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13117
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13599
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7488
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5237
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4253
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5728
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3325
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10455
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2056
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2906
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6124
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2730
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3780
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1732
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5972
  num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

6-31694938-CTCTA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31694938
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31694934
    reference: chr 6
allele count: 1
allele frequency: 9.336893802169894e-6
allele num: 107102
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.*72_*75delTAGA
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.*72_*75delTAGA
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.*72_*75delTAGA
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.810_813delTAGA
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.771_774delTAGA
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1555_1558delTAGA
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.*32_*35delTAGA
  variant of: http://identifiers.org/hgnc/2716
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29914
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: CTCTA
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP

6-31694948-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31694948
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31694948
    reference: chr 6
allele count: 1
allele frequency: 9.298000929800094e-6
allele num: 107550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1549G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.*66G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.*26G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.*66G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.804G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.765G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.*66G>A
  variant of: http://identifiers.org/hgnc/2716
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29913
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

6-31694950-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31694950
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31694950
    reference: chr 6
allele count: 1
allele frequency: 9.275749480558029e-6
allele num: 107808
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.*64G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.*64G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.*64G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.802G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.*24G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1547G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.763G>A
  variant of: http://identifiers.org/hgnc/2716
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29913
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/6-31694965-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31694965
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31694966
    reference: chr 6
allele count: 1
allele frequency: 9.135423518234305e-6
allele num: 109464
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.*8_*9insT
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.747_748insT
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.*48_*49insT
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.786_787insT
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1531_1532insT
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.*48_*49insT
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.*48_*49insT
  variant of: http://identifiers.org/hgnc/2716
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29913
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2885
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

6-31694971-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31694971
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31694971
    reference: chr 6
allele count: 2
allele frequency: 1.811200463667319e-5
allele num: 110424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.742T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.*43T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.*3T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.*43T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.*43T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1526T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.781T>C
  variant of: http://identifiers.org/hgnc/2716
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29913
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2396
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2570
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

6-31694973-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31694973
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31694973
    reference: chr 6
allele count: 1
allele frequency: 9.035056017347308e-6
allele num: 110680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.*41T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1524T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.740T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.*41T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.*41T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.779T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.*1T>C
  variant of: http://identifiers.org/hgnc/2716
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29912
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

6-31694975-TATCCTACCCCTGGCCAGC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31694975
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31694957
    reference: chr 6
allele count: 1
allele frequency: 9.003007004339449e-6
allele num: 111074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsp: ENSP00000413164.1:p.Cys183_Gly188del
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  variant of: http://identifiers.org/hgnc/2716
canonical: false
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29912
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2783
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Cys183_Gly188del
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: TATCCTACCCCTGGCCAGC
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

6-31694978-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31694978
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31694978
    reference: chr 6
allele count: 1
allele frequency: 8.979078746520608e-6
allele num: 111370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.774G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.*36G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.735G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1519G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.*36G>A
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.561G>A
  hgvsp: ENSP00000413164.1:p.Gly188Glu
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.*36G>A
  variant of: http://identifiers.org/hgnc/2716
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29911
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2962
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly188Glu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS

6-31694987-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31694987
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31694987
    reference: chr 6
allele count: 1
allele frequency: 8.863362405162022e-6
allele num: 112824
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.*27C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.726C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.*27C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.552C>T
  hgvsp: ENSP00000413164.1:p.Pro185Leu
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1510C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.765C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.*27C>T
  variant of: http://identifiers.org/hgnc/2716
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29911
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50150
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3691
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro185Leu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-31694992-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31694992
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31694992
    reference: chr 6
allele count: 1
allele frequency: 8.816631694027614e-6
allele num: 113422
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.547C>T
  hgvsp: ENST00000437288.1:c.547C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.*22C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.760C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.*22C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.721C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1505C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.*22C>T
  variant of: http://identifiers.org/hgnc/2716
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29911
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50151
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Cys183Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/6-31694998-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31694998
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31694998
    reference: chr 6
allele count: 1
allele frequency: 8.774546794658055e-6
allele num: 113966
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.*16G>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.754G>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1499G>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.715G>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.541G>T
  hgvsp: ENST00000437288.1:c.541G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.*16G>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.*16G>T
  variant of: http://identifiers.org/hgnc/2716
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29912
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4353
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly181Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

6-31695000-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31695000
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31695000
    reference: chr 6
allele count: 1
allele frequency: 8.763320246775098e-6
allele num: 114112
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.539G>C
  hgvsp: ENSP00000413164.1:p.Gly181Arg
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.*14G>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.*14G>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.*14G>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1497G>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.752G>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.713G>C
  variant of: http://identifiers.org/hgnc/2716
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29912
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50153
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4467
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly181Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

6-31695013-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31695013
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31695013
    reference: chr 6
allele count: 1
allele frequency: 8.703826201998399e-6
allele num: 114892
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.*1G>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.*1G>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.526G>C
  hgvsp: ENSP00000413164.1:p.Glu176Asp
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.*1G>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1484G>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.700G>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.739G>C
  variant of: http://identifiers.org/hgnc/2716
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29912
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4969
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu176Asp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/6-31695018-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31695018
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31695018
    reference: chr 6
allele count: 1
allele frequency: 8.690513435533772e-6
allele num: 115068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.854G>T
  hgvsp: ENSP00000364943.2:p.Ser285Ile
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.734G>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.854G>T
  hgvsp: ENSP00000364949.3:p.Ser285Ile
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.854G>T
  hgvsp: ENSP00000364945.2:p.Ser285Ile
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.521G>T
  hgvsp: ENSP00000413164.1:p.Ala175Ser
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.695G>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1479G>T
  variant of: http://identifiers.org/hgnc/2716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29913
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5061
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser285Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

6-31695028-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31695028
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31695028
    reference: chr 6
allele count: 1
allele frequency: 8.664159836420662e-6
allele num: 115418
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1469C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.844C>T
  hgvsp: ENSP00000364943.2:p.Arg282Cys
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.844C>T
  hgvsp: ENSP00000364949.3:p.Arg282Cys
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.511C>T
  hgvsp: ENST00000437288.1:c.511C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.844C>T
  hgvsp: ENSP00000364945.2:p.Arg282Cys
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.685C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.724C>T
  variant of: http://identifiers.org/hgnc/2716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29913
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50155
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg282Cys
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

6-31695031-T-TGCTGAGCACCAAGCAGAGGGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31695031
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31695052
    reference: chr 6
allele count: 2
allele frequency: 1.732051615138131e-5
allele num: 115470
alternate allele: TGCTGAGCACCAAGCAGAGGGA
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsp: ENSP00000364945.2:p.Ser274_Ser280dup
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsp: ENSP00000413164.1:p.Pro164_Ala170dup
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsp: ENSP00000364949.3:p.Ser274_Ser280dup
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsp: ENSP00000364943.2:p.Ser274_Ser280dup
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  variant of: http://identifiers.org/hgnc/2716
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29913
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5327
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50154
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser274_Ser280dup
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-31695035-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31695035
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31695035
    reference: chr 6
allele count: 1
allele frequency: 8.654412019247412e-6
allele num: 115548
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.837C>T
  hgvsp: ENST00000375792.3:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.717C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.678C>T
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.504C>T
  hgvsp: ENSP00000413164.1:p.Ser169Leu
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.837C>T
  hgvsp: ENST00000375789.2:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.837C>T
  hgvsp: ENST00000375787.2:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1462C>T
  variant of: http://identifiers.org/hgnc/2716
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29913
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5345
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50156
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser169Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

6-31695043-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31695043
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31695043
    reference: chr 6
allele count: 1680
allele frequency: 1.452508170358458e-2
allele num: 115662
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.670T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.829T>C
  hgvsp: ENST00000375792.3:c.829T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.829T>C
  hgvsp: ENST00000375789.2:c.829T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1454T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.709T>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.496T>C
  hgvsp: ENST00000437288.1:c.496T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.829T>C
  hgvsp: ENST00000375787.2:c.829T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2716
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 6.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 9.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 2.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.75e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.25e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 5.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.25e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 3822
  bin: 2.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29985
  bin: 9.75e1
  variant carriers: 889
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.75e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 6.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50775
  bin: 9.75e1
  variant carriers: 1548
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu277Leu
num of homozygotes: 107
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

6-31695054-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31695054
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 31695054
    reference: chr 6
allele count: 8
allele frequency: 6.909178844094379e-5
allele num: 115788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364943
  ensembl transcript: ENST00000375787
  gene symbol: DDAH2
  hgvsc: ENST00000375787.2:c.818G>C
  hgvsp: ENSP00000364943.2:p.Ser273Thr
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000483792
  gene symbol: DDAH2
  hgvsc: ENST00000483792.1:n.659G>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000413164
  ensembl transcript: ENST00000437288
  gene symbol: DDAH2
  hgvsc: ENST00000437288.1:c.485G>C
  hgvsp: ENSP00000413164.1:p.Ala163Pro
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364949
  ensembl transcript: ENST00000375792
  gene symbol: DDAH2
  hgvsc: ENST00000375792.3:c.818G>C
  hgvsp: ENSP00000364949.3:p.Ser273Thr
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000469963
  gene symbol: DDAH2
  hgvsc: ENST00000469963.1:n.1443G>C
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000213722
  ensembl protein: ENSP00000364945
  ensembl transcript: ENST00000375789
  gene symbol: DDAH2
  hgvsc: ENST00000375789.2:c.818G>C
  hgvsp: ENSP00000364945.2:p.Ser273Thr
  variant of: http://identifiers.org/hgnc/2716
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000213722
  ensembl transcript: ENST00000480913
  gene symbol: DDAH2
  hgvsc: ENST00000480913.1:n.698G>C
  variant of: http://identifiers.org/hgnc/2716
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser273Thr
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24714
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12125
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4343
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5716
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3813
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2913
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.982224e6

MQ
type: SiteQuality
SIO_000300: 5.732e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.26e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

FS
type: SiteQuality
SIO_000300: 5.899e0

VQSLOD
type: SiteQuality
SIO_000300: -1.832e0

QD
type: SiteQuality
SIO_000300: 1.458e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.109e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 4334
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12259
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3810
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2906
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24717
bin: 9.75e1
variant carriers: 26

GenotypeQuality
all individuals: 5711
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4153
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.148897885739991e-4
allele num: 66690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.319281271596407e-4
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

DP
type: SiteQuality
SIO_000300: 2.982026e6

VQSLOD
type: SiteQuality
SIO_000300: 3.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.059e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12291
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5695
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24703
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4147
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3811
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2903
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.648784253184099e-5
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.656e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.073e0

QD
type: SiteQuality
SIO_000300: 1.23e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.063e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 2.980922e6

MQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4150
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4306
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24700
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2321
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3811
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5672
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12239
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.534e0

VQSLOD
type: SiteQuality
SIO_000300: -1.569e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.251e0

MQRankSum
type: SiteQuality
SIO_000300: 3.93e-1

MQ
type: SiteQuality
SIO_000300: 5.664e1

DP
type: SiteQuality
SIO_000300: 2.978709e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.025e0

QD
type: SiteQuality
SIO_000300: 1.439e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.003e0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12307
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24697
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2875
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3812
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4307
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.129e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.1e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.978313e6

GenotypeQuality
all individuals: 4302
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12283
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4144
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2874
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5653
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.834e0

FS
type: SiteQuality
SIO_000300: 8.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.911e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

DP
type: SiteQuality
SIO_000300: 2.977737e6

VQSLOD
type: SiteQuality
SIO_000300: -7.073e-1

QD
type: SiteQuality
SIO_000300: 8.49e0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12258
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2872
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3808
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4302
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5651
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4143
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24696
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2320
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.500780405811022e-5
allele num: 66632
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VQSLOD
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FS
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BaseQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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African
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allele num: 10322
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South Asian
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allele frequency: 6.06134076857801e-5
allele num: 16498
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European (Non-Finnish)
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allele frequency: 1.502133028901039e-5
allele num: 66572
num of homozygotes: 0

Other
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allele num: 900
num of homozygotes: 0

FS
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QD
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

QD
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DP
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ReadPosRankSum
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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SIO_000300: -5.13e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Non-Finnish)
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allele count: 15
allele frequency: 2.253334935704843e-4
allele num: 66568
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.26e1

ReadPosRankSum
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DP
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FS
type: SiteQuality
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VQSLOD
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.945e1

MQRankSum
type: SiteQuality
SIO_000300: 1.99e-1

InbreedingCoeff
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SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.13e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 2
allele frequency: 1.942879347192539e-4
allele num: 10294
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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VQSLOD
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QD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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MQRankSum
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FS
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MQ
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SIO_000300: 5.97e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66458
num of homozygotes: 0

South Asian
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allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8630
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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ClippingRankSum
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FS
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 3
allele frequency: 2.919423900350331e-4
allele num: 10276
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
type: Population
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FS
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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MQRankSum
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QD
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DP
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MQ
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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variant carriers: 117

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 150

Latino
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allele count: 766
allele frequency: 8.900766906809203e-2
allele num: 8606
num of homozygotes: 0

East Asian
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allele count: 178
allele frequency: 2.97559344700769e-2
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Other
type: Population
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allele frequency: 1.392215568862275e-1
allele num: 668
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European (Non-Finnish)
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allele count: 5035
allele frequency: 1.034093242965701e-1
allele num: 48690
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African
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allele count: 704
allele frequency: 1.034381428151631e-1
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South Asian
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allele count: 614
allele frequency: 5.152735817388385e-2
allele num: 11916
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European (Finnish)
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allele count: 953
allele frequency: 1.977999169779992e-1
allele num: 4818
num of homozygotes: 6

MQRankSum
type: SiteQuality
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FS
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ReadPosRankSum
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QD
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MQ
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1750
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1957
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1551
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1783
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2705
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2281
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1136
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1861
bin: 6.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 2.464571780653111e-4
allele num: 48690
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 4.407875404055245e-4
allele num: 6806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.678415575696542e-4
allele num: 11916
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 2.0755500207555e-3
allele num: 4818
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.497005988023952e-3
allele num: 668
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 2.26e0

DP
type: SiteQuality
SIO_000300: 2.621104e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.097e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

GenotypeQuality
all individuals: 2177
bin: 4.25e1
variant carriers: 1495

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 973

GenotypeQuality
all individuals: 1227
bin: 8.25e1
variant carriers: 1037

GenotypeQuality
all individuals: 3291
bin: 7.5e0
variant carriers: 1240

GenotypeQuality
all individuals: 1551
bin: 6.75e1
variant carriers: 1234

GenotypeQuality
all individuals: 1750
bin: 5.75e1
variant carriers: 1356

GenotypeQuality
all individuals: 1273
bin: 7.75e1
variant carriers: 1072

GenotypeQuality
all individuals: 2968
bin: 2.25e1
variant carriers: 1378

GenotypeQuality
all individuals: 2884
bin: 1.75e1
variant carriers: 1430

GenotypeQuality
all individuals: 2281
bin: 3.75e1
variant carriers: 1475

GenotypeQuality
all individuals: 1136
bin: 9.25e1
variant carriers: 993

GenotypeQuality
all individuals: 2425
bin: 3.25e1
variant carriers: 1488

GenotypeQuality
all individuals: 1435
bin: 7.25e1
variant carriers: 1221

GenotypeQuality
all individuals: 16404
bin: 9.75e1
variant carriers: 10565

GenotypeQuality
all individuals: 2705
bin: 2.75e1
variant carriers: 1512

GenotypeQuality
all individuals: 1783
bin: 5.25e1
variant carriers: 1351

GenotypeQuality
all individuals: 1957
bin: 4.75e1
variant carriers: 1408

South Asian
type: Population
allele count: 4864
allele frequency: 4.081906680093991e-1
allele num: 11916
num of homozygotes: 0

Other
type: Population
allele count: 198
allele frequency: 2.964071856287425e-1
allele num: 668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1027
allele frequency: 2.131589871315899e-1
allele num: 4818
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16085
allele frequency: 3.303553090983775e-1
allele num: 48690
num of homozygotes: 0

Latino
type: Population
allele count: 3043
allele frequency: 3.535905182430862e-1
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 2192
allele frequency: 3.220687628563033e-1
allele num: 6806
num of homozygotes: 0

East Asian
type: Population
allele count: 2350
allele frequency: 3.928452022734871e-1
allele num: 5982
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

QD
type: SiteQuality
SIO_000300: 2.26e0

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

DP
type: SiteQuality
SIO_000300: 2.621104e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.097e-1

GenotypeQuality
all individuals: 1136
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1783
bin: 5.25e1
variant carriers: 13

GenotypeQuality
all individuals: 7472
bin: 2.5e0
variant carriers: 58

GenotypeQuality
all individuals: 3291
bin: 7.5e0
variant carriers: 75

GenotypeQuality
all individuals: 2425
bin: 3.25e1
variant carriers: 35

GenotypeQuality
all individuals: 1227
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 2281
bin: 3.75e1
variant carriers: 24

GenotypeQuality
all individuals: 1861
bin: 6.25e1
variant carriers: 16

GenotypeQuality
all individuals: 2177
bin: 4.25e1
variant carriers: 17

GenotypeQuality
all individuals: 1957
bin: 4.75e1
variant carriers: 11

GenotypeQuality
all individuals: 2884
bin: 1.75e1
variant carriers: 29

GenotypeQuality
all individuals: 2705
bin: 2.75e1
variant carriers: 32

GenotypeQuality
all individuals: 1273
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2968
bin: 2.25e1
variant carriers: 27

GenotypeQuality
all individuals: 1551
bin: 6.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1435
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 16404
bin: 9.75e1
variant carriers: 6

European (Non-Finnish)
type: Population
allele count: 108
allele frequency: 2.2181146025878e-3
allele num: 48690
num of homozygotes: 0

Latino
type: Population
allele count: 22
allele frequency: 2.556356030676272e-3
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 54
allele frequency: 4.531722054380665e-3
allele num: 11916
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 1.469291801351748e-3
allele num: 6806
num of homozygotes: 0

East Asian
type: Population
allele count: 18
allele frequency: 3.009027081243731e-3
allele num: 5982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 1.03777501037775e-3
allele num: 4818
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

QD
type: SiteQuality
SIO_000300: 2.26e0

DP
type: SiteQuality
SIO_000300: 2.621104e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.097e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.053809817210926e-5
allele num: 48690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4818
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.621104e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.097e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-1

GenotypeQuality
all individuals: 8
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 314
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8501
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.436557231588288e-4
allele num: 2254
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 3.048780487804878e-3
allele num: 328
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.206e-1

FS
type: SiteQuality
SIO_000300: 4.346e0

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.636e0

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 7.82e0

DP
type: SiteQuality
SIO_000300: 4.69557e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

GenotypeQuality
all individuals: 711
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1068
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1014
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3458
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1105
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2668
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 7.662835249042146e-4
allele num: 2610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2446
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.344e0

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

DP
type: SiteQuality
SIO_000300: 2.770464e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.063e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

QD
type: SiteQuality
SIO_000300: 1.333e1

GenotypeQuality
all individuals: 245
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9787
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 33096
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3223
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2986
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3301
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.10798924993892e-5
allele num: 16372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.812938e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.551e0

VQSLOD
type: SiteQuality
SIO_000300: -1.353e0

QD
type: SiteQuality
SIO_000300: 1.284e1

MQ
type: SiteQuality
SIO_000300: 5.92e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.963e0

FS
type: SiteQuality
SIO_000300: 1.0873e1

MQRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-2

GenotypeQuality
all individuals: 2768
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
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variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2210
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34633
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2832
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9586
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2890
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.732099196646873e-5
allele num: 11452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

FS
type: SiteQuality
SIO_000300: 2.769e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
SIO_000300: 1.51e1

VQSLOD
type: SiteQuality
SIO_000300: 4.57e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.638e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.515e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 1.777255e6

GenotypeQuality
all individuals: 9539
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 242
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GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 385
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GenotypeQuality
all individuals: 455
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GenotypeQuality
all individuals: 719
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 768
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variant carriers: 0

GenotypeQuality
all individuals: 295
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GenotypeQuality
all individuals: 2078
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2873
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1640
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
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variant carriers: 0

GenotypeQuality
all individuals: 34777
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.138735420503377e-5
allele num: 16290
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64310
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

FS
type: SiteQuality
SIO_000300: 1.7369e1

DP
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MQRankSum
type: SiteQuality
SIO_000300: -1.79e-1

MQ
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SIO_000300: 5.955e1

BaseQRankSum
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SIO_000300: -2.701e0

VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.687e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.147037128104254e-5
allele num: 16268
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64208
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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SIO_000300: 5.955e1

BaseQRankSum
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.562109472631842e-5
allele num: 64016
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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MQRankSum
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MQ
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -1.634e0

GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.085540599218411e-4
allele num: 9212
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.098108116587707e-4
allele num: 63746
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.951e1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

QD
type: SiteQuality
SIO_000300: 1.482e1

DP
type: SiteQuality
SIO_000300: 1.766434e6

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 6.16370808678501e-5
allele num: 16224
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African
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allele frequency: 0.0e0
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Latino
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 63752
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DP
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQRankSum
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MQ
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 63468
num of homozygotes: 0

East Asian
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Latino
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European (Finnish)
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African
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Other
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South Asian
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num of homozygotes: 0

FS
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MQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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QD
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ReadPosRankSum
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DP
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele num: 8508
num of homozygotes: 0

Latino
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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South Asian
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MQ
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QD
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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DP
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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African
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Other
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QD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
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MQ
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VQSLOD
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DP
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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South Asian
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African
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allele frequency: 3.301782962799912e-4
allele num: 9086
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63356
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.44e-1

MQ
type: SiteQuality
SIO_000300: 5.998e1

MQRankSum
type: SiteQuality
SIO_000300: -5.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.109e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 5.3e-1

QD
type: SiteQuality
SIO_000300: 1.295e1

DP
type: SiteQuality
SIO_000300: 1.762311e6

GenotypeQuality
all individuals: 2789
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36590
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.101806963420009e-4
allele num: 9076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.234e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.661e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.744e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-2

DP
type: SiteQuality
SIO_000300: 1.762165e6

MQRankSum
type: SiteQuality
SIO_000300: 7.91e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

QD
type: SiteQuality
SIO_000300: 2.829e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63288
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.173601679219657e-5
allele num: 16198
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

DP
type: SiteQuality
SIO_000300: 1.759605e6

VQSLOD
type: SiteQuality
SIO_000300: 8.139999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.399e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2788
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 112
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63254
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.470050636038039e-4
allele num: 16194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9036
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.835e0

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 1.326e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.54e-1

DP
type: SiteQuality
SIO_000300: 1.759034e6

QD
type: SiteQuality
SIO_000300: 1.222e1

GenotypeQuality
all individuals: 108
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 104
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variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.175126590095097e-5
allele num: 16194
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.381e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.76e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

DP
type: SiteQuality
SIO_000300: 1.757619e6

VQSLOD
type: SiteQuality
SIO_000300: -1.404e0

FS
type: SiteQuality
SIO_000300: 6.786e0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.878e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.582128278960858e-5
allele num: 63206
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.385e0

MQ
type: SiteQuality
SIO_000300: 5.83e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.556e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

FS
type: SiteQuality
SIO_000300: 9.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

DP
type: SiteQuality
SIO_000300: 1.757042e6

QD
type: SiteQuality
SIO_000300: 8.630000000000001e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9010
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.74503353157029e-5
allele num: 63224
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.54e0

DP
type: SiteQuality
SIO_000300: 1.757243e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.24e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 9.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9014
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16198
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63228
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.073e0

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -9.75e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.95e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.224e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9020
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.527183872938302e-4
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.581477732793522e-5
allele num: 63232
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 1.757363e6

MQRankSum
type: SiteQuality
SIO_000300: 7.76e-1

QD
type: SiteQuality
SIO_000300: 1.204e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e-1

GenotypeQuality
all individuals: 36768
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2632
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1317
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.581427712939242e-5
allele num: 63234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16192
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

FS
type: SiteQuality
SIO_000300: 7.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

QD
type: SiteQuality
SIO_000300: 1.128e1

DP
type: SiteQuality
SIO_000300: 1.757675e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.34e-1

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2788
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2632
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63234
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.505082369435682e-4
allele num: 11412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

FS
type: SiteQuality
SIO_000300: 7.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

QD
type: SiteQuality
SIO_000300: 1.128e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.34e-1

DP
type: SiteQuality
SIO_000300: 1.757675e6

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9396
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9024
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.235941169200346e-4
allele num: 16182
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.58122766515923e-5
allele num: 63242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

QD
type: SiteQuality
SIO_000300: 1.116e1

MQRankSum
type: SiteQuality
SIO_000300: -1.45e-1

DP
type: SiteQuality
SIO_000300: 1.75686e6

FS
type: SiteQuality
SIO_000300: 2.553e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.78e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-1

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9397
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variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2788
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36782
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1585
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.108647450110865e-4
allele num: 9020
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63236
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.639e0

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-2

MQ
type: SiteQuality
SIO_000300: 5.931e1

QD
type: SiteQuality
SIO_000300: 1.24e1

DP
type: SiteQuality
SIO_000300: 1.7565e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2781
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9028
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.352941176470588e-4
allele num: 8500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16178
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

VQSLOD
type: SiteQuality
SIO_000300: 4.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.361e1

DP
type: SiteQuality
SIO_000300: 1.75501e6

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2622
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36777
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2780
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.770391159445712e-5
allele num: 11402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9028
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16172
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.163e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.31e-1

DP
type: SiteQuality
SIO_000300: 1.753672e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.408e0

FS
type: SiteQuality
SIO_000300: 5.892e0

MQRankSum
type: SiteQuality
SIO_000300: -1.287e0

VQSLOD
type: SiteQuality
SIO_000300: -2.73e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
all individuals: 2776
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 9361
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.183527083848628e-5
allele num: 16172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.165258126800241e-5
allele num: 63186
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.07e-2

DP
type: SiteQuality
SIO_000300: 1.753256e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

FS
type: SiteQuality
SIO_000300: 6.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.117e0

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-2

MQ
type: SiteQuality
SIO_000300: 5.978e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 7.54e0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2591
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
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variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 687
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GenotypeQuality
all individuals: 740
bin: 9.25e1
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GenotypeQuality
all individuals: 1564
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2763
bin: 7.75e1
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GenotypeQuality
all individuals: 2777
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63036
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.211180124223603e-5
allele num: 16100
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

QD
type: SiteQuality
SIO_000300: 1.025e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.743205e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16050
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.588360494297786e-5
allele num: 62958
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.735528e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.63e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.309e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.186e0

QD
type: SiteQuality
SIO_000300: 1.289e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.22e-1

MQ
type: SiteQuality
SIO_000300: 5.884e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6214
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.826099546346643e-5
allele num: 62162
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15774
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.37e1

FS
type: SiteQuality
SIO_000300: 6.742e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

DP
type: SiteQuality
SIO_000300: 1.619146e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.622323166774821e-5
allele num: 61640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15638
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.481604e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.303e0

QD
type: SiteQuality
SIO_000300: 3.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8742
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 9.077705156136529e-5
allele num: 11016
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15416
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -8.04e-1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-1

MQ
type: SiteQuality
SIO_000300: 6.01e1

InbreedingCoeff
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SIO_000300: 1.0e-3

DP
type: SiteQuality
SIO_000300: 1.389432e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.12e-1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15426
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.474634991338777e-4
allele num: 8082
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8738
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11004
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.749e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

FS
type: SiteQuality
SIO_000300: 4.523e0

QD
type: SiteQuality
SIO_000300: 6.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.388371e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.186239620403321e-4
allele num: 8430
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10598
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60822
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.35e0

MQRankSum
type: SiteQuality
SIO_000300: -3.459e0

FS
type: SiteQuality
SIO_000300: 4.689e0

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.629999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.77e1

QD
type: SiteQuality
SIO_000300: 1.091e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

DP
type: SiteQuality
SIO_000300: 5.402669e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60942
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.174311926605505e-5
allele num: 10900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.192e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e0

DP
type: SiteQuality
SIO_000300: 5.408549e6

VQSLOD
type: SiteQuality
SIO_000300: 1.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

QD
type: SiteQuality
SIO_000300: 1.229e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.179523472517103e-4
allele num: 8478
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.98e1

MQRankSum
type: SiteQuality
SIO_000300: 4.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.57e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.424e0

DP
type: SiteQuality
SIO_000300: 5.41056e6

VQSLOD
type: SiteQuality
SIO_000300: 6.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.87e-1

QD
type: SiteQuality
SIO_000300: 1.21e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.629089013423693e-5
allele num: 61384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8502
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.999e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.643e0

QD
type: SiteQuality
SIO_000300: 1.467e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.761170492377782e-5
allele num: 11414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61634
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8504
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Other
type: Population
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allele frequency: 0.0e0
allele num: 822
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South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 1.172058134083451e-4
allele num: 8532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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QD
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MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 5.435246e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.6e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 1
allele frequency: 7.649938800489595e-5
allele num: 13072
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61704
num of homozygotes: 0

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-2

QD
type: SiteQuality
SIO_000300: 1.328e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.61796589327897e-5
allele num: 61806
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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African
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East Asian
type: Population
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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MQ
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FS
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ClippingRankSum
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BaseQRankSum
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QD
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MQRankSum
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DP
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.175640724194686e-4
allele num: 8506
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61892
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.53e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
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SIO_000300: -2.15e-1

DP
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
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SIO_000300: 2.3e-3

MQRankSum
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SIO_000300: 1.2e0

FS
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SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.60627088152146e-5
allele num: 62256
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
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BaseQRankSum
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QD
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InbreedingCoeff
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SIO_000300: 1.2e-3

VQSLOD
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MQ
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SIO_000300: 5.931e1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.95e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11450
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62420
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.55e-1

MQRankSum
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FS
type: SiteQuality
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QD
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MQ
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BaseQRankSum
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VQSLOD
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SIO_000300: -1.123e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

DP
type: SiteQuality
SIO_000300: 5.466506e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15280
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.597290994473373e-5
allele num: 62606
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.473594e6

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
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QD
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InbreedingCoeff
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SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.256e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.407e0

MQRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.505334374186833e-5
allele num: 15372
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.911e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.126e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.47e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590836780146357e-5
allele num: 62860
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.52e-1

FS
type: SiteQuality
SIO_000300: 1.106e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.55e-1

InbreedingCoeff
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SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.997e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.723e0

DP
type: SiteQuality
SIO_000300: 5.484873e6

MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.2672348959639e-5
allele num: 15956
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62904
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.569e0

DP
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.586596433331218e-5
allele num: 63028
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East Asian
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South Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQRankSum
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BaseQRankSum
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QD
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DP
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MQ
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.241464928615767e-4
allele num: 16110
num of homozygotes: 0

European (Non-Finnish)
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Other
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East Asian
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European (Finnish)
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African
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Latino
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DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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FS
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ClippingRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 63062
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South Asian
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Other
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Latino
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European (Finnish)
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ClippingRankSum
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QD
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InbreedingCoeff
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FS
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 210
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 238
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4962
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 114
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 15
allele frequency: 1.720183486238532e-2
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.239641657334826e-3
allele num: 8930
num of homozygotes: 0

East Asian
type: Population
allele count: 89
allele frequency: 1.044846208030054e-2
allele num: 8518
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 54
allele frequency: 8.559743841739847e-4
allele num: 63086
num of homozygotes: 1

Latino
type: Population
allele count: 16
allele frequency: 1.39640425903299e-3
allele num: 11458
num of homozygotes: 0

South Asian
type: Population
allele count: 1486
allele frequency: 9.179639238942426e-2
allele num: 16188
num of homozygotes: 105

VQSLOD
type: SiteQuality
SIO_000300: 5.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.63e-1

DP
type: SiteQuality
SIO_000300: 5.527899e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

MQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.056e-1

QD
type: SiteQuality
SIO_000300: 1.582e1

FS
type: SiteQuality
SIO_000300: 5.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0