1-173834079-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834079
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834079
    reference: chr 1
allele count: 1
allele frequency: 9.104980424292089e-6
allele num: 109830
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.357-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.423-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.839C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.290-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.266-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.357-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.290-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.161-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.804C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.448-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.329-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.208-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.552-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.547-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.290-237C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.277-237C>G
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7056
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-173834082-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834082
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834082
    reference: chr 1
allele count: 1
allele frequency: 9.117100032821561e-6
allele num: 109684
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.329-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.208-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.357-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.290-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.290-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.290-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.836G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.552-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.448-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.161-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.801G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.547-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.277-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.266-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.357-240G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.423-240G>T
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7023
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

1-173834086-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834086
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834086
    reference: chr 1
allele count: 371
allele frequency: 3.386210547452584e-3
allele num: 109562
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.547-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.448-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.277-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.832C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.290-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.208-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.266-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.552-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.329-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.357-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.290-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.423-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.797C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.161-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.290-244C>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.357-244C>G
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10354
  bin: 3.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 5.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 4.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 7.5e0
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11489
  bin: 2.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 8472
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 1.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
num of homozygotes: 12
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

1-173834087-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834087
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834086
    reference: chr 1
allele count: 1
allele frequency: 9.126918934706022e-6
allele num: 109566
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.290-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.448-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.547-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.266-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.357-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.357-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.552-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.290-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.161-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.208-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.277-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.830delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.329-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.795delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.423-246delC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.290-246delC
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4006
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11442
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: TG
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-173834448-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834448
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834448
    reference: chr 1
allele count: 1
allele frequency: 2.782569981635038e-5
allele num: 35938
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.657A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.550-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.107-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+200A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.303-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.275-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.236-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.369-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.498-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.435A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.465A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.394-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.498-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.236-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.223-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.305-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.236-28A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.303-28A>G
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-173834457-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834457
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834457
    reference: chr 1
allele count: 1
allele frequency: 2.631301968213872e-5
allele num: 38004
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.369-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.236-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.456T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.223-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.648T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.426T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.550-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.498-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.236-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.303-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.236-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.394-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.275-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.305-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.498-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+191T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.303-37T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.107-37T>G
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

1-173834458-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834458
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834458
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 38440
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.236-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.107-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.550-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.425A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.303-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.236-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.303-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+190A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.455A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.498-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.236-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.275-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.647A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.498-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.223-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.369-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.394-38A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.305-38A>G
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-173834470-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834470
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834470
    reference: chr 1
allele count: 2
allele frequency: 4.543595801717479e-5
allele num: 44018
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.305-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.498-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.303-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+178A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.394-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.635A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.236-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.236-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.498-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.303-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.550-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.236-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.443A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.275-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.369-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.413A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.107-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-50A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.223-50A>C
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

1-173834471-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834471
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834471
    reference: chr 1
allele count: 2
allele frequency: 4.470872267179327e-5
allele num: 44734
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.369-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.550-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.498-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.442T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.236-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.303-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.412T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.223-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.634T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.275-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.394-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.303-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+177T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.236-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.107-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.236-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.498-51T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.305-51T>C
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

1-173834489-TGTTTCA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834489
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834483
    reference: chr 1
allele count: 1
allele frequency: 1.637626097209485e-5
allele num: 61064
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000363859
  gene symbol: GAS5
  hgvsc: ENST00000363859.1:n.76_81delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.223-75_223-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.498-75_498-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.498-75_498-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.107-75_107-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.275-75_275-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.418_423delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+153_265+158delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.550-75_550-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.236-75_236-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-75_154-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.369-75_369-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.388_393delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.394-75_394-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.305-75_305-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.303-75_303-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.303-75_303-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.236-75_236-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.610_615delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.236-75_236-70delTGAAAC
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: TGTTTCA
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-173834509-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834509
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834509
    reference: chr 1
allele count: 1
allele frequency: 1.288294555667208e-5
allele num: 77622
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000363859
  gene symbol: GAS5
  hgvsc: ENST00000363859.1:n.62G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.596G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.223-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+139G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.404G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.498-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.236-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.498-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.107-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.303-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.305-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.236-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.374G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.394-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.303-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.879G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.275-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.550-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.369-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.236-89G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-89G>A
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

1-173834513-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834513
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834514
    reference: chr 1
allele count: 1
allele frequency: 1.242637373561647e-5
allele num: 80474
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.369dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.550-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.223-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.874dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.399dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+134dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.591dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000363859
  gene symbol: GAS5
  hgvsc: ENST00000363859.1:n.57dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.369-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.303-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.303-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.236-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.236-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.498-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.275-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.107-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.305-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.394-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.498-94dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.236-94dupA
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

1-173834513-ATT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834513
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834511
    reference: chr 1
allele count: 3
allele frequency: 3.727912120684941e-5
allele num: 80474
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.236-95_236-94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.590_591delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.107-95_107-94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.236-95_236-94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+133_265+134delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000363859
  gene symbol: GAS5
  hgvsc: ENST00000363859.1:n.56_57delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.368_369delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.275-94_274+94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.873_874delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.303-94_302+94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-95_154-94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.236-95_236-94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.498-94_497+94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.550-95_550-94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.498-94_497+94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.394-95_394-94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.223-95_223-94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.398_399delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.305-94_304+94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.303-94_302+94delAA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.369-94_368+94delAA
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: ATT
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

1-173834523-TCA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834523
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834521
    reference: chr 1
allele count: 1
allele frequency: 1.167079034592223e-5
allele num: 85684
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.107-105_107-104delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000363859
  gene symbol: GAS5
  hgvsc: ENST00000363859.1:n.46_47delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+84_497+85delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+84_368+85delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+123_265+124delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.580_581delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.358_359delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+84_302+85delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+84_274+85delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.863_864delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-105_154-104delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.236-105_236-104delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.223-105_223-104delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.388_389delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.394-105_394-104delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+84_302+85delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.236-105_236-104delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+84_304+85delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.550-105_550-104delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+84_497+85delTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.236-105_236-104delTG
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: TCA
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

1-173834524-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834524
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834522
    reference: chr 1
allele count: 3
allele frequency: 3.485697023214742e-5
allele num: 86066
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.862_863delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+83_302+84delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.107-106_107-105delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+122_265+123delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.236-106_236-105delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+83_302+84delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.357_358delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.236-106_236-105delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.550-106_550-105delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+83_274+84delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+83_497+84delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.387_388delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.236-106_236-105delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+83_497+84delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000363859
  gene symbol: GAS5
  hgvsc: ENST00000363859.1:n.45_46delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.579_580delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.394-106_394-105delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+83_368+84delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-106_154-105delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+83_304+84delCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.223-106_223-105delCT
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: CAG
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-173834524-CAGAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834524
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834520
    reference: chr 1
allele count: 2
allele frequency: 2.323798015476495e-5
allele num: 86066
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.107-108_107-105delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+81_368+84delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.236-108_236-105delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.550-108_550-105delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+81_274+84delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.236-108_236-105delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.577_580delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-108_154-105delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.236-108_236-105delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+81_302+84delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.385_388delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.860_863delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.355_358delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.394-108_394-105delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000363859
  gene symbol: GAS5
  hgvsc: ENST00000363859.1:n.43_46delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+81_497+84delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+81_497+84delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.223-108_223-105delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+120_265+123delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+81_302+84delCTCT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+81_304+84delCTCT
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: CAGAG
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

1-173834544-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834544
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834544
    reference: chr 1
allele count: 1
allele frequency: 1.112396547121118e-5
allele num: 89896
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+104A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+104A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000363859
  gene symbol: GAS5
  hgvsc: ENST00000363859.1:n.27A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.369A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.561A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+104A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+104A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.339A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.844A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+104A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+104A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+104A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+104A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-124A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+65A>G
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

1-173834557-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834557
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834557
    reference: chr 1
allele count: 1
allele frequency: 1.1124955500178e-5
allele num: 89888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+91G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+52G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.356G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+91G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+52G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+91G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-137G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+91G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.326G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.831G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+91G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+52G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000363859
  gene symbol: GAS5
  hgvsc: ENST00000363859.1:n.14G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+52G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.548G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+91G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+91G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+52G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+91G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+52G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+52G>A
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

1-173834560-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834560
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834560
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 89934
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+49G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.353G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+49G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+49G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.323G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+88G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000363859
  gene symbol: GAS5
  hgvsc: ENST00000363859.1:n.11G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+49G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+88G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+88G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+49G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+88G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+49G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.828G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+49G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+88G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+88G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.545G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+88G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+88G>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-140G>C
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

1-173834561-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834561
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834561
    reference: chr 1
allele count: 1
allele frequency: 1.111629871717913e-5
allele num: 89958
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.544T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+87T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+87T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+87T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+48T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.352T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+48T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+48T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+87T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+48T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+48T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.322T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.827T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000363859
  gene symbol: GAS5
  hgvsc: ENST00000363859.1:n.10T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+87T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+48T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+87T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-141T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+87T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+48T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+87T>C
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

1-173834563-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834563
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834563
    reference: chr 1
allele count: 5
allele frequency: 5.568672873880696e-5
allele num: 89788
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+85A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000363859
  gene symbol: GAS5
  hgvsc: ENST00000363859.1:n.8A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.350A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+46A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+46A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+85A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+46A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.825A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+85A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+46A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.320A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.542A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-143A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+85A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+85A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+85A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+46A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+85A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+85A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+46A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+46A>G
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

1-173834571-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834571
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834571
    reference: chr 1
allele count: 1
allele frequency: 1.116370456372243e-5
allele num: 89576
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.534C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+77C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+38C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+77C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+77C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+77C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+77C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.342C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.817C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+38C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+38C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.312C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+38C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+38C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+77C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+38C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+77C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-151C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+38C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+77C>T
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/1-173834575-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834575
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834575
    reference: chr 1
allele count: 2
allele frequency: 2.234187537701915e-5
allele num: 89518
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+73T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.308T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+73T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+73T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.530T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+73T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.338T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.813T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+73T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+73T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+73T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+73T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-155T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+34T>G
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

1-173834578-CAATT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834578
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834574
    reference: chr 1
allele count: 10
allele frequency: 1.121076233183857e-4
allele num: 89200
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.301_304delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+66_222+69delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.331_334delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+66_393+69delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+27_302+30delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+27_497+30delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+66_265+69delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+27_274+30delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+27_497+30delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+27_302+30delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+66_549+69delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.806_809delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.523_526delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+27_368+30delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+27_304+30delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+66_235+69delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+66_106+69delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-162_154-159delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+66_235+69delAATT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+66_235+69delAATT
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: CAATT
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum

1-173834580-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834580
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834580
    reference: chr 1
allele count: 381
allele frequency: 4.271204681509383e-3
allele num: 89202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.808T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+29T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+68T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.303T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-160T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.333T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+29T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+29T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+29T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+68T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+68T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.525T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+68T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+29T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+29T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+68T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+68T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+29T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+68T>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+68T>A
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11051
  bin: 7.5e0
  variant carriers: 17
genotype quality: GenotypeQuality
num of homozygotes: 11
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

1-173834585-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834585
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834585
    reference: chr 1
allele count: 10
allele frequency: 1.12696373430703e-4
allele num: 88734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+24G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+63G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.298G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+24G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+63G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+63G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.328G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.520G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+63G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.803G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+63G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+24G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+63G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+24G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+63G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+63G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+24G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+24G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-165G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+24G>A
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS

1-173834586-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834586
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834586
    reference: chr 1
allele count: 1
allele frequency: 1.128184300187279e-5
allele num: 88638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+23C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+23C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.519C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+62C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+62C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.802C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+62C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+23C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+62C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-166C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.297C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.327C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+62C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+23C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+62C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+23C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+62C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+62C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+23C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+23C>T
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11065
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

1-173834588-TAAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834588
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834585
    reference: chr 1
allele count: 1
allele frequency: 1.132400235539249e-5
allele num: 88308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+57_235+59delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.514_516delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+18_274+20delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+57_235+59delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+57_106+59delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.322_324delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+18_302+20delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+57_393+59delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.797_799delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+57_235+59delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+18_497+20delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+18_304+20delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+18_368+20delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+57_265+59delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.292_294delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+18_497+20delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+18_302+20delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+57_222+59delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-171_154-169delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+57_549+59delGTT
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: TAAC
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

1-173834596-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834596
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834596
    reference: chr 1
allele count: 1
allele frequency: 1.138796519837835e-5
allele num: 87812
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+52T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+13T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+52T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.509T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+52T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.792T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+52T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.287T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+52T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+13T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+52T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+52T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.317T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-176T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+13T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+13T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+13T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+13T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+52T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+13T>C
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13105
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

1-173834599-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834599
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834599
    reference: chr 1
allele count: 3
allele frequency: 3.42716139645403e-5
allele num: 87536
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+10T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+49T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+10T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.314T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+49T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.506T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+49T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+10T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.789T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+10T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+10T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+49T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.284T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+49T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-179T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+10T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+10T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+49T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+49T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+49T>C
  variant of: http://identifiers.org/hgnc/16355
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

1-173834600-AACATGTACCTTTAAAAGGTATG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834600
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834578
    reference: chr 1
allele count: 14
allele frequency: 1.598392473854866e-4
allele num: 87588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: splice donor
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.484_497+8delCATACCTTTTAAAGGTACATGT
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: AACATGTACCTTTAAAAGGTATG
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

1-173834605-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834605
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834605
    reference: chr 1
allele count: 11083
allele frequency: 1.253449445826736e-1
allele num: 88420
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302+4C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497+4C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274+4C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+43C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+43C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.500C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.308C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+43C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497+4C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368+4C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304+4C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.278C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.783C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302+4C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-185C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+43C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+43C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+43C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+43C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+43C>T
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: n.497+4C>T
num of homozygotes: 815
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-173834609-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834609
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834609
    reference: chr 1
allele count: 1
allele frequency: 1.140198850679558e-5
allele num: 87704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.304G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.274G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.274G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.302G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.368G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.302G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.497G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+39G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-189G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+39G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+39G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+39G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+39G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.304G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.497G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+39G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.496G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.779G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+39G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+39G>A
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: n.497G>A
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-173834614-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834614
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834614
    reference: chr 1
allele count: 1
allele frequency: 1.138122553036511e-5
allele num: 87864
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.491T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.363T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.297T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.269T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.299T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.774T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.297T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.492T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.492T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.269T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.299T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+34T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-194T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+34T>G
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

1-173834618-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834618
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834618
    reference: chr 1
allele count: 2
allele frequency: 2.275727094806791e-5
allele num: 87884
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+30C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.295C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+30C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.265C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.488C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-198C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.293C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+30C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.488C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.487C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+30C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+30C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.265C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+30C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.295C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.359C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+30C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.770C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.293C>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+30C>T
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11016
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

1-173834618-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834618
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834618
    reference: chr 1
allele count: 1
allele frequency: 1.137863547403395e-5
allele num: 87884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.295C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.487C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.265+30C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.265C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.393+30C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-198C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.359C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.488C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.549+30C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.488C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.770C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.235+30C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.222+30C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.265C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.293C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.295C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.235+30C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.293C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.235+30C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.106+30C>A
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12034
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

1-173834716-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834716
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834716
    reference: chr 1
allele count: 58
allele frequency: 5.146223736513344e-4
allele num: 112704
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-296A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-31A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-31A>G
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-173834720-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834720
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834720
    reference: chr 1
allele count: 1
allele frequency: 8.873114463176575e-6
allele num: 112700
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-300T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-35T>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-35T>G
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

1-173834720-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834720
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834720
    reference: chr 1
allele count: 2
allele frequency: 1.774622892635315e-5
allele num: 112700
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-300T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-35T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-35T>C
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/1-173834720-AAAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834720
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834717
    reference: chr 1
allele count: 14
allele frequency: 1.242236024844721e-4
allele num: 112700
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-38_69-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-38_421-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-38_198-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-38_773-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-38_198-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-38_198-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-38_228-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-38_703-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-38_420-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-38_512-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-38_198-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-38_226-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-38_226-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-38_198-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-38_356-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-38_228-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-38_292-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-38_185-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-303_154-301delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-38_228-36delGTT
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-38_421-36delGTT
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: AAAC
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

1-173834725-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834725
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834725
    reference: chr 1
allele count: 1
allele frequency: 8.871854927428227e-6
allele num: 112716
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-305A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-40A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-40A>G
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

1-173834728-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834728
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834728
    reference: chr 1
allele count: 1
allele frequency: 8.872169777840869e-6
allele num: 112712
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-43A>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-308A>C
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

1-173834729-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834729
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834729
    reference: chr 1
allele count: 15
allele frequency: 1.330731014904187e-4
allele num: 112720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-44A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-309A>T
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

1-173834735-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834735
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834736
    reference: chr 1
allele count: 3
allele frequency: 2.661698163428267e-5
allele num: 112710
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-316dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-51dupA
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-51dupA
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

1-173834738-TTCAAAGTTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834738
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834729
    reference: chr 1
allele count: 1
allele frequency: 8.8710678991537e-6
allele num: 112726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8081
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: TTCAAAGTTG
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD

1-173834747-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834747
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834747
    reference: chr 1
allele count: 1
allele frequency: 8.869179600886918e-6
allele num: 112750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-62C>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-327C>A
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-173834750-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834750
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834750
    reference: chr 1
allele count: 1
allele frequency: 8.869179600886918e-6
allele num: 112750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-330A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-65A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-65A>G
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

1-173834754-ACAGGGTTCTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834754
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834744
    reference: chr 1
allele count: 1
allele frequency: 8.868864962662078e-6
allele num: 112754
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000208317
  ensembl transcript: ENST00000385582
  gene symbol: SNORD78
  variant of: http://identifiers.org/hgnc/32738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: ACAGGGTTCTT
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-173834755-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834755
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834755
    reference: chr 1
allele count: 2
allele frequency: 1.773804455796793e-5
allele num: 112752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-335G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-70G>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-70G>T
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

1-173834771-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834771
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834771
    reference: chr 1
allele count: 1
allele frequency: 8.867763904653802e-6
allele num: 112768
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000208317
  ensembl transcript: ENST00000385582
  gene symbol: SNORD78
  hgvsc: ENST00000385582.1:n.54A>G
  variant of: http://identifiers.org/hgnc/32738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-86A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-86A>G
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-173834772-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834772
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834771
    reference: chr 1
allele count: 1
allele frequency: 8.867449366864115e-6
allele num: 112772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-353delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000208317
  ensembl transcript: ENST00000385582
  gene symbol: SNORD78
  hgvsc: ENST00000385582.1:n.52delG
  variant of: http://identifiers.org/hgnc/32738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-88delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-88delG
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: AC
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

1-173834773-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834773
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834773
    reference: chr 1
allele count: 1
allele frequency: 8.867763904653802e-6
allele num: 112768
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000208317
  ensembl transcript: ENST00000385582
  gene symbol: SNORD78
  hgvsc: ENST00000385582.1:n.52G>A
  variant of: http://identifiers.org/hgnc/32738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-353G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-88G>A
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-88G>A
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-173834782-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834782
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834781
    reference: chr 1
allele count: 1
allele frequency: 8.86713485138682e-6
allele num: 112776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000208317
  ensembl transcript: ENST00000385582
  gene symbol: SNORD78
  hgvsc: ENST00000385582.1:n.42delG
  variant of: http://identifiers.org/hgnc/32738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-363delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-98delG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-98delG
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: AC
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

1-173834784-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834784
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834784
    reference: chr 1
allele count: 1
allele frequency: 8.867606632969762e-6
allele num: 112770
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000208317
  ensembl transcript: ENST00000385582
  gene symbol: SNORD78
  hgvsc: ENST00000385582.1:n.41T>C
  variant of: http://identifiers.org/hgnc/32738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-364T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-99T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-99T>C
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-173834791-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834791
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834791
    reference: chr 1
allele count: 1
allele frequency: 8.86713485138682e-6
allele num: 112776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000208317
  ensembl transcript: ENST00000385582
  gene symbol: SNORD78
  hgvsc: ENST00000385582.1:n.34A>T
  variant of: http://identifiers.org/hgnc/32738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-371A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-106A>T
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-106A>T
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

1-173834791-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834791
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834791
    reference: chr 1
allele count: 1
allele frequency: 8.86713485138682e-6
allele num: 112776
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-371A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000208317
  ensembl transcript: ENST00000385582
  gene symbol: SNORD78
  hgvsc: ENST00000385582.1:n.34A>G
  variant of: http://identifiers.org/hgnc/32738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-106A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-106A>G
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum

1-173834795-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834795
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834795
    reference: chr 1
allele count: 1
allele frequency: 8.86713485138682e-6
allele num: 112776
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000208317
  ensembl transcript: ENST00000385582
  gene symbol: SNORD78
  hgvsc: ENST00000385582.1:n.30T>C
  variant of: http://identifiers.org/hgnc/32738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-110T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-110T>C
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

1-173834809-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834809
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834809
    reference: chr 1
allele count: 1
allele frequency: 8.866977602014578e-6
allele num: 112778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000208317
  ensembl transcript: ENST00000385582
  gene symbol: SNORD78
  hgvsc: ENST00000385582.1:n.16T>C
  variant of: http://identifiers.org/hgnc/32738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-389T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-124T>C
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-124T>C
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

1-173834810-TCAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834810
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834807
    reference: chr 1
allele count: 2
allele frequency: 1.773395520402916e-5
allele num: 112778
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-128_198-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-128_198-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-128_228-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-128_198-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-128_512-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-128_226-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-128_292-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-128_773-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000443799
  gene symbol: GAS5
  hgvsc: ENST00000443799.1:n.703-128_703-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-128_421-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-128_420-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-128_198-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000208317
  ensembl transcript: ENST00000385582
  gene symbol: SNORD78
  hgvsc: ENST00000385582.1:n.12_14delTTG
  variant of: http://identifiers.org/hgnc/32738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-128_69-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-128_228-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-128_228-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-128_226-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-128_421-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-393_154-391delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-128_356-126delTTG
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-128_198-126delTTG
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: TCAA
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

1-173834819-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 173834819
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 173834819
    reference: chr 1
allele count: 1
allele frequency: 8.866663120001419e-6
allele num: 112782
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000455838
  gene symbol: GAS5
  hgvsc: ENST00000455838.1:n.228-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436656
  gene symbol: GAS5
  hgvsc: ENST00000436656.1:n.228-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000442067
  gene symbol: GAS5
  hgvsc: ENST00000442067.1:n.198-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000431268
  gene symbol: GAS5
  hgvsc: ENST00000431268.1:n.421-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000416952
  gene symbol: GAS5
  hgvsc: ENST00000416952.1:n.420-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000454068
  gene symbol: GAS5
  hgvsc: ENST00000454068.1:n.292-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000208317
  ensembl transcript: ENST00000385582
  gene symbol: SNORD78
  hgvsc: ENST00000385582.1:n.6A>G
  variant of: http://identifiers.org/hgnc/32738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000412059
  gene symbol: GAS5
  hgvsc: ENST00000412059.1:n.226-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000436285
  gene symbol: GAS5
  hgvsc: ENST00000436285.1:n.198-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456812
  gene symbol: GAS5
  hgvsc: ENST00000456812.2:n.198-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000430245
  gene symbol: GAS5
  hgvsc: ENST00000430245.1:n.356-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000451607
  gene symbol: GAS5
  hgvsc: ENST00000451607.1:n.773-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000414075
  gene symbol: GAS5
  hgvsc: ENST00000414075.1:n.69-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449589
  gene symbol: GAS5
  hgvsc: ENST00000449589.1:n.421-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000448718
  gene symbol: GAS5
  hgvsc: ENST00000448718.1:n.198-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000449289
  gene symbol: GAS5
  hgvsc: ENST00000449289.1:n.228-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422183
  gene symbol: GAS5
  hgvsc: ENST00000422183.1:n.198-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000450589
  gene symbol: GAS5
  hgvsc: ENST00000450589.1:n.226-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000422008
  gene symbol: GAS5
  hgvsc: ENST00000422008.1:n.185-134A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000452197
  gene symbol: GAS5
  hgvsc: ENST00000452197.1:n.154-399A>G
  variant of: http://identifiers.org/hgnc/16355
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000234741
  ensembl transcript: ENST00000456293
  gene symbol: GAS5
  hgvsc: ENST00000456293.1:n.512-134A>G
  variant of: http://identifiers.org/hgnc/16355
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS

GenotypeDepth
all individuals: 1208
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3633
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1398
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 894
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 101
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2451
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 498
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7442
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 765
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3179
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2018
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6284
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3793
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2814
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11432
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 648
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4394
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1970
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13193
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15984
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10978
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.659695943703114e-5
allele num: 60252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8166
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.081e0

QD
type: SiteQuality
SIO_000300: 2.41e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQ
type: SiteQuality
SIO_000300: 5.269e1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 1.809245e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.725e0

FS
type: SiteQuality
SIO_000300: 3.129e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.535e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

GenotypeDepth
all individuals: 11939
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2447
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 765
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1395
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4034
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 216
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 101
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11424
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3782
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12411
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6141
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2812
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4361
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3160
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7198
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.122422915526363e-5
allele num: 10962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15964
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.83e-1

MQ
type: SiteQuality
SIO_000300: 5.903e1

DP
type: SiteQuality
SIO_000300: 1.801294e6

FS
type: SiteQuality
SIO_000300: 3.075e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.214e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.608e0

VQSLOD
type: SiteQuality
SIO_000300: 4.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-1

QD
type: SiteQuality
SIO_000300: 1.27e1

GenotypeDepth
all individuals: 259
bin: 7.25e1
variant carriers: 2

GenotypeDepth
all individuals: 6978
bin: 3.75e1
variant carriers: 39

GenotypeDepth
all individuals: 118
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 305
bin: 6.75e1
variant carriers: 10

GenotypeDepth
all individuals: 164
bin: 8.25e1
variant carriers: 5

GenotypeDepth
all individuals: 219
bin: 7.75e1
variant carriers: 5

GenotypeDepth
all individuals: 499
bin: 6.25e1
variant carriers: 16

GenotypeDepth
all individuals: 2347
bin: 1.25e1
variant carriers: 24

GenotypeDepth
all individuals: 102
bin: 9.25e1
variant carriers: 2

GenotypeDepth
all individuals: 4386
bin: 4.25e1
variant carriers: 53

GenotypeQuality
all individuals: 1824
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 250
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11495
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1949
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1945
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 791
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1783
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 422
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3751
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 216
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5866
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4318
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1686
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2790
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1038
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3073
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 2.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 354

African
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allele count: 349
allele frequency: 4.856665738936822e-2
allele num: 7186
num of homozygotes: 12

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 3
allele frequency: 3.703703703703704e-3
allele num: 810
num of homozygotes: 0

Latino
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allele count: 17
allele frequency: 1.553362573099415e-3
allele num: 10944
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.327122704285334e-5
allele num: 60112
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8154
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.795944e6

MQ
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SIO_000300: 6.0e1

VQSLOD
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SIO_000300: 5.91e0

ClippingRankSum
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SIO_000300: -6.900000000000001e-2

ReadPosRankSum
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SIO_000300: 5.51e-1

MQRankSum
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SIO_000300: 2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.75e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

QD
type: SiteQuality
SIO_000300: 1.722e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.265664160401002e-5
allele num: 15960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8154
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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SIO_000300: 6.0e1

VQSLOD
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FS
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ClippingRankSum
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BaseQRankSum
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QD
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MQRankSum
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SIO_000300: -6.45e-1

InbreedingCoeff
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SIO_000300: 3.0e-3

ReadPosRankSum
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SIO_000300: 9.21e-1

DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 345
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3490
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.535155050660117e-4
allele num: 6514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3072
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.107e-1

QD
type: SiteQuality
SIO_000300: 7.88e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-1

BaseQRankSum
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SIO_000300: 3.01e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.21e-2

DP
type: SiteQuality
SIO_000300: 5.14593e5

FS
type: SiteQuality
SIO_000300: 3.979e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.95e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 29790
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3646
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 5.4608999563128e-5
allele num: 18312
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.624e1

FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 2.16e0

MQ
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.87e-2

ClippingRankSum
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ReadPosRankSum
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SIO_000300: 0.0e0

MQRankSum
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SIO_000300: -2.12e-1

DP
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SIO_000300: 5.49783e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 358
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3674
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 18496
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2992
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
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QD
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ClippingRankSum
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DP
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FS
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InbreedingCoeff
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

South Asian
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 4.82392667631452e-4
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3274
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

FS
type: SiteQuality
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InbreedingCoeff
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DP
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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QD
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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African
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East Asian
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European (Non-Finnish)
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Other
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InbreedingCoeff
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FS
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QD
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ClippingRankSum
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MQ
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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East Asian
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Latino
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European (Non-Finnish)
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Other
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FS
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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QD
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MQ
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Other
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South Asian
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East Asian
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Latino
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ReadPosRankSum
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FS
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BaseQRankSum
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MQ
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VQSLOD
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QD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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Latino
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Other
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European (Finnish)
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BaseQRankSum
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QD
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VQSLOD
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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Latino
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South Asian
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European (Finnish)
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Other
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VQSLOD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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QD
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MQ
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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DP
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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Latino
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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MQRankSum
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MQ
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VQSLOD
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BaseQRankSum
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FS
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QD
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Latino
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European (Non-Finnish)
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East Asian
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ClippingRankSum
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MQ
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FS
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MQRankSum
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DP
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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East Asian
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Other
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VQSLOD
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BaseQRankSum
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MQRankSum
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QD
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DP
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FS
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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East Asian
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MQ
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DP
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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FS
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QD
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ReadPosRankSum
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South Asian
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South Asian
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African
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MQ
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VQSLOD
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DP
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GenotypeQuality
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European (Non-Finnish)
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African
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European (Finnish)
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 10
allele frequency: 2.15898786648819e-4
allele num: 46318
num of homozygotes: 0

East Asian
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African
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European (Finnish)
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South Asian
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Latino
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Other
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MQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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ClippingRankSum
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QD
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MQ
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FS
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BaseQRankSum
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GenotypeDepth
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variant carriers: 9

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 4.225352112676056e-3
allele num: 710
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East Asian
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allele count: 0
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European (Non-Finnish)
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allele num: 46234
num of homozygotes: 0

Latino
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African
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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QD
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MQ
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FS
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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SIO_000300: 2.64e-1

DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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Other
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
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allele num: 45994
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African
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allele count: 3
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South Asian
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allele count: 4
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allele num: 13694
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European (Finnish)
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ReadPosRankSum
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SIO_000300: 4.95e-1

MQRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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ClippingRankSum
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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European (Finnish)
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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InbreedingCoeff
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BaseQRankSum
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MQ
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MQRankSum
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ClippingRankSum
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DP
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FS
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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East Asian
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Latino
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European (Finnish)
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FS
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DP
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.202643171806168e-5
allele num: 45400
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 8790
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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East Asian
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MQRankSum
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SIO_000300: 2.31e-1

DP
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MQ
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InbreedingCoeff
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SIO_000300: -4.6e-3

VQSLOD
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: 7.58e-1

FS
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SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.3e-1

QD
type: SiteQuality
SIO_000300: 7.18e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 45226
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 5.112474437627812e-4
allele num: 5868
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -4.5e-3

VQSLOD
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FS
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MQRankSum
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SIO_000300: 1.24e0

ReadPosRankSum
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SIO_000300: -2.2e-1

QD
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ClippingRankSum
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SIO_000300: 3.65e-1

BaseQRankSum
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SIO_000300: 2.64e0

MQ
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SIO_000300: 6.0e1

DP
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SIO_000300: 8.84023e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 4

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.674849331177422e-4
allele num: 13606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.141031492469192e-4
allele num: 8764
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.546414527459904e-4
allele num: 45266
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
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African
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.984e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-2

InbreedingCoeff
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SIO_000300: -3.4e-3

MQRankSum
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SIO_000300: -2.983e0

BaseQRankSum
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SIO_000300: 5.29e-1

MQ
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SIO_000300: 5.085e1

FS
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SIO_000300: 5.986e0

DP
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SIO_000300: 8.83466e5

ClippingRankSum
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SIO_000300: -2.78e-1

QD
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SIO_000300: 2.08e0

GenotypeDepth
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variant carriers: 3228

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 9

GenotypeDepth
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GenotypeDepth
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variant carriers: 16

GenotypeDepth
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GenotypeDepth
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variant carriers: 1025

GenotypeDepth
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GenotypeDepth
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variant carriers: 2891

GenotypeDepth
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GenotypeDepth
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variant carriers: 2170

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 481

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9566
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variant carriers: 9293

European (Finnish)
type: Population
allele count: 675
allele frequency: 1.151091405184175e-1
allele num: 5864
num of homozygotes: 34

African
type: Population
allele count: 306
allele frequency: 4.626549742969459e-2
allele num: 6614
num of homozygotes: 5

European (Non-Finnish)
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allele count: 5314
allele frequency: 1.156575109911635e-1
allele num: 45946
num of homozygotes: 253

South Asian
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allele count: 1847
allele frequency: 1.346798891643576e-1
allele num: 13714
num of homozygotes: 145

East Asian
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allele count: 2408
allele frequency: 3.514302393461763e-1
allele num: 6852
num of homozygotes: 357

Latino
type: Population
allele count: 441
allele frequency: 5.059660394676457e-2
allele num: 8716
num of homozygotes: 16

Other
type: Population
allele count: 92
allele frequency: 1.288515406162465e-1
allele num: 714
num of homozygotes: 5

InbreedingCoeff
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SIO_000300: 4.23e-2

MQ
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SIO_000300: 6.0e1

DP
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FS
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QD
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SIO_000300: 1.537e1

MQRankSum
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SIO_000300: 5.5e-2

BaseQRankSum
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SIO_000300: -2.627e0

VQSLOD
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SIO_000300: 6.23e0

ClippingRankSum
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SIO_000300: -1.07e-1

ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 453
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
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African
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allele count: 0
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South Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.193944712593243e-5
allele num: 45580
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InbreedingCoeff
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MQRankSum
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DP
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FS
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MQ
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BaseQRankSum
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QD
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SIO_000300: 1.265e1

ClippingRankSum
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SIO_000300: -4.4e-2

VQSLOD
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SIO_000300: 5.14e-1

ReadPosRankSum
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SIO_000300: 6.66e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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European (Finnish)
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African
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South Asian
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MQ
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ClippingRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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MQRankSum
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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FS
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VQSLOD
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InbreedingCoeff
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MQRankSum
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DP
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MQ
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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Other
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South Asian
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European (Non-Finnish)
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European (Finnish)
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FS
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MQ
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InbreedingCoeff
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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FS
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VQSLOD
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MQ
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DP
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ReadPosRankSum
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European (Finnish)
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South Asian
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European (Non-Finnish)
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African
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Latino
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East Asian
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MQ
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FS
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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South Asian
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European (Finnish)
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European (Non-Finnish)
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African
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VQSLOD
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ClippingRankSum
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QD
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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FS
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DP
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QD
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MQ
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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MQ
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DP
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FS
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Finnish)
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Latino
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East Asian
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QD
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MQ
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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VQSLOD
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QD
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MQ
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DP
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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BaseQRankSum
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VQSLOD
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DP
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MQRankSum
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MQ
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FS
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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European (Non-Finnish)
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African
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East Asian
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Latino
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DP
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ClippingRankSum
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InbreedingCoeff
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FS
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QD
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MQ
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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European (Non-Finnish)
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Other
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East Asian
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Latino
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South Asian
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FS
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VQSLOD
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DP
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MQ
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InbreedingCoeff
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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Latino
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East Asian
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QD
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DP
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3808
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3634
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35151
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.256904637832204e-5
allele num: 61408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8150
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.479335e6

VQSLOD
type: SiteQuality
SIO_000300: -5.312e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.584e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

FS
type: SiteQuality
SIO_000300: 8.382999999999999e0

QD
type: SiteQuality
SIO_000300: 1.152e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000234741
ensembl transcript: ENST00000452197
gene symbol: GAS5
hgvsc: ENST00000452197.1:n.154-351A>G
variant of: http://identifiers.org/hgnc/16355

GenotypeDepth
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5434
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9237
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8612
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 579
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8098
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1084
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4888
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3224
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 674
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1293
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7018
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2952
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1990
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2143
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3823
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35149
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8150
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.807468733485996e-5
allele num: 11354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.92e1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.8e-2

FS
type: SiteQuality
SIO_000300: 1.643e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.25e0

QD
type: SiteQuality
SIO_000300: 1.305e1

DP
type: SiteQuality
SIO_000300: 2.479769e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.362e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000234741
ensembl transcript: ENST00000436656
gene symbol: GAS5
hgvsc: ENST00000436656.1:n.228-88delG
variant of: http://identifiers.org/hgnc/16355

GenotypeDepth
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5435
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1084
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7018
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4888
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8096
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 677
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8613
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1293
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3224
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2953
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9238
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 579
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1989
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35148
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2143
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3826
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.627975124540097e-5
allele num: 61426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8150
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

VQSLOD
type: SiteQuality
SIO_000300: 3.41e0

FS
type: SiteQuality
SIO_000300: 5.580000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.23e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.38e-1

DP
type: SiteQuality
SIO_000300: 2.479823e6

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000234741
ensembl transcript: ENST00000449589
gene symbol: GAS5
hgvsc: ENST00000449589.1:n.421-88G>A
variant of: http://identifiers.org/hgnc/16355

GenotypeDepth
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5434
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7018
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 579
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2957
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3224
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1989
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 681
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8096
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4888
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1084
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8613
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9237
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1293
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1776
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3831
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2143
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35148
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4048
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.628028132326127e-5
allele num: 61424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.986e1

DP
type: SiteQuality
SIO_000300: 2.479808e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.09e-1

FS
type: SiteQuality
SIO_000300: 5.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.846e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.51e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000234741
ensembl transcript: ENST00000436285
gene symbol: GAS5
hgvsc: ENST00000436285.1:n.198-98delG
variant of: http://identifiers.org/hgnc/16355

GenotypeDepth
all individuals: 702
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8614
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7018
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 580
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8096
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5439
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1989
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2952
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3224
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1083
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9236
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1294
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4888
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3635
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3119
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3831
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35149
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 45
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8152
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.21921482565228e-4
allele num: 8202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61428
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.479904e6

QD
type: SiteQuality
SIO_000300: 1.135e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

FS
type: SiteQuality
SIO_000300: 4.716e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.005e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000234741
ensembl transcript: ENST00000451607
gene symbol: GAS5
hgvsc: ENST00000451607.1:n.773-99T>C
variant of: http://identifiers.org/hgnc/16355

GenotypeDepth
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9237
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3224
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1989
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 701
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7018
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 378
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2952
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4888
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8095
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1294
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8614
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 580
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1083
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5438
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35149
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3829
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2673
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3119
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3635
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.627975124540097e-5
allele num: 61426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.06e-1

FS
type: SiteQuality
SIO_000300: 5.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.57e-1

DP
type: SiteQuality
SIO_000300: 2.479972e6

MQ
type: SiteQuality
SIO_000300: 5.935e1

QD
type: SiteQuality
SIO_000300: 5.76e0

VQSLOD
type: SiteQuality
SIO_000300: -1.649e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000234741
ensembl transcript: ENST00000443799
gene symbol: GAS5
hgvsc: ENST00000443799.1:n.703-106A>T
variant of: http://identifiers.org/hgnc/16355

GenotypeDepth
all individuals: 1989
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 462
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1294
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4888
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5439
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9237
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1083
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 730
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7018
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 579
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8615
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 378
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8095
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2947
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3224
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3828
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35151
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3635
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8152
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.1667488899852e-5
allele num: 16216
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.55e0

FS
type: SiteQuality
SIO_000300: 1.942e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

DP
type: SiteQuality
SIO_000300: 2.480037e6

QD
type: SiteQuality
SIO_000300: 1.458e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.487e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.251e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000234741
ensembl transcript: ENST00000422183
gene symbol: GAS5
hgvsc: ENST00000422183.1:n.198-106A>G
variant of: http://identifiers.org/hgnc/16355

GenotypeDepth
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 378
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2947
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5439
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4888
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 579
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1989
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1294
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7018
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1083
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8095
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8615
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 462
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 730
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3224
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9237
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3828
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3635
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35151
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.187648456057007e-3
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8152
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.480037e6

VQSLOD
type: SiteQuality
SIO_000300: -4.251e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.487e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e0

FS
type: SiteQuality
SIO_000300: 1.942e0

QD
type: SiteQuality
SIO_000300: 1.458e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: -1.55e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000234741
ensembl transcript: ENST00000452197
gene symbol: GAS5
hgvsc: ENST00000452197.1:n.154-375T>C
variant of: http://identifiers.org/hgnc/16355

GenotypeDepth
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8615
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5442
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 378
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1989
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3224
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2944
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1083
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 746
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9238
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8093
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4888
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1294
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 579
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7019
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3823
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35150
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4048
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.1667488899852e-5
allele num: 16216
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.427999999999999e-1

FS
type: SiteQuality
SIO_000300: 8.05e-1

QD
type: SiteQuality
SIO_000300: 9.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.747e0

MQRankSum
type: SiteQuality
SIO_000300: -3.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.437e0

DP
type: SiteQuality
SIO_000300: 2.480056e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000234741
ensembl transcript: ENST00000430245
gene symbol: GAS5
hgvsc: ENST00000430245.1:n.356-124T>C
variant of: http://identifiers.org/hgnc/16355

GenotypeDepth
all individuals: 3224
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7019
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 579
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2946
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8615
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5442
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9237
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4888
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 773
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8093
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1988
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1294
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1084
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3635
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35149
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3832
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.21921482565228e-4
allele num: 8202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 2.480135e6

QD
type: SiteQuality
SIO_000300: 1.407e1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000234741
ensembl transcript: ENST00000422008
gene symbol: GAS5
hgvsc: ENST00000422008.1:n.185-128_185-126delTTG
variant of: http://identifiers.org/hgnc/16355

GenotypeDepth
all individuals: 2946
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4887
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1085
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 377
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8615
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 579
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9237
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1988
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 773
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5442
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1294
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7019
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3224
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8093
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35149
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4048
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3831
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3635
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.255844240411539e-5
allele num: 61428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: -1.091e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

DP
type: SiteQuality
SIO_000300: 2.480366e6

QD
type: SiteQuality
SIO_000300: 1.478e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

MQ
type: SiteQuality
SIO_000300: 5.893e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000234741
ensembl transcript: ENST00000443799
gene symbol: GAS5
hgvsc: ENST00000443799.1:n.703-134A>G
variant of: http://identifiers.org/hgnc/16355

GenotypeDepth
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5445
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1988
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 378
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4887
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7018
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2939
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 794
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 579
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9237
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8093
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1294
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3224
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8615
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1085
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35149
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 94
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3116
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3823
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.627816121890871e-5
allele num: 61432
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.718e0

MQRankSum
type: SiteQuality
SIO_000300: -7.92e-1

FS
type: SiteQuality
SIO_000300: 1.608e0