6-99912467-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912467
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912467
    reference: chr 6
allele count: 1
allele frequency: 8.297102651754007e-6
allele num: 120524
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1308+13G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*341+13G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+489G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1308+13G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.348+13G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000439569
  ensembl transcript: ENST00000539675
  gene symbol: USP45
  hgvsc: ENST00000539675.1:c.-147+13G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.440+13G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*274+13G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.299+13G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.402+13G>A
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7471
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-99912474-TCTTAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912474
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912469
    reference: chr 6
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1308+1_1308+5delGTAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+477_1164+481delGTAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*274+1_*274+5delGTAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*341+1_*341+5delGTAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000439569
  ensembl transcript: ENST00000539675
  gene symbol: USP45
  hgvsc: ENST00000539675.1:c.-147+1_-147+5delGTAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.440+1_440+5delGTAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.348+1_348+5delGTAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.299+1_299+5delGTAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.402+1_402+5delGTAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1308+1_1308+5delGTAAG
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1308+1_1308+5delGTAAG
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: TCTTAC
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

6-99912479-CCTTAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912479
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912474
    reference: chr 6
allele count: 1
allele frequency: 8.264326209484141e-6
allele num: 121002
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1304_1308delATAAG
  hgvsp: ENSP00000333376.6:p.Asp435GlufsTer6
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1304_1308delATAAG
  hgvsp: ENSP00000424372.1:p.Asp435GlufsTer6
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.436_440delATAAG
  hgvsp: ENSP00000421706.1:p.Asp146GlufsTer47
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+472_1164+476delATAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.398_402delATAAG
  hgvsp: ENSP00000423374.1:p.Asp133GlufsTer47
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000439569
  ensembl transcript: ENST00000539675
  gene symbol: USP45
  hgvsc: ENST00000539675.1:c.-151_-147delATAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.344_348delATAAG
  hgvsp: ENSP00000376495.2:p.Asp115GlufsTer6
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.295_299delATAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*337_*341delATAAG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*270_*274delATAAG
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp435GlufsTer6
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: CCTTAT
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

6-99912480-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912480
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912479
    reference: chr 6
allele count: 1
allele frequency: 8.262414277451872e-6
allele num: 121030
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1307delA
  hgvsp: ENSP00000333376.6:p.Lys436ArgfsTer4
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.401delA
  hgvsp: ENSP00000423374.1:p.Lys134ArgfsTer20
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.439delA
  hgvsp: ENSP00000421706.1:p.Lys147ArgfsTer20
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.347delA
  hgvsp: ENSP00000376495.2:p.Lys116ArgfsTer4
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*340delA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.298delA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+475delA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1307delA
  hgvsp: ENSP00000424372.1:p.Lys436ArgfsTer4
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000439569
  ensembl transcript: ENST00000539675
  gene symbol: USP45
  hgvsc: ENST00000539675.1:c.-148delA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*273delA
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Lys436ArgfsTer4
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: CT
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

6-99912493-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912493
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912493
    reference: chr 6
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1295C>T
  hgvsp: ENSP00000424372.1:p.Ser432Leu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*328C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.335C>T
  hgvsp: ENSP00000376495.2:p.Ser112Leu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*261C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.389C>T
  hgvsp: ENSP00000423374.1:p.Ser130Leu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.427C>T
  hgvsp: ENSP00000421706.1:p.Ser143Leu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1295C>T
  hgvsp: ENSP00000333376.6:p.Ser432Leu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+463C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.286C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000439569
  ensembl transcript: ENST00000539675
  gene symbol: USP45
  hgvsc: ENST00000539675.1:c.-160C>T
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser432Leu
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum

6-99912507-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912507
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912507
    reference: chr 6
allele count: 3
allele frequency: 2.473614775725594e-5
allele num: 121280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.375C>A
  hgvsp: ENST00000511403.1:c.375C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1281C>A
  hgvsp: ENST00000500704.2:c.1281C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.321C>A
  hgvsp: ENST00000392738.2:c.321C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*247C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000439569
  ensembl transcript: ENST00000539675
  gene symbol: USP45
  hgvsc: ENST00000539675.1:c.-174C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*314C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.413C>A
  hgvsp: ENST00000496090.2:c.413C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.272C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1281C>A
  hgvsp: ENST00000327681.6:c.1281C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+449C>A
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala427Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

6-99912508-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912508
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912507
    reference: chr 6
allele count: 3
allele frequency: 2.473533194815474e-5
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1279delG
  hgvsp: ENSP00000424372.1:p.Ala427ProfsTer13
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1279delG
  hgvsp: ENSP00000333376.6:p.Ala427ProfsTer13
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.319delG
  hgvsp: ENSP00000376495.2:p.Ala107ProfsTer13
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.411delG
  hgvsp: ENSP00000421706.1:p.Ala138ProfsTer29
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.270delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000439569
  ensembl transcript: ENST00000539675
  gene symbol: USP45
  hgvsc: ENST00000539675.1:c.-176delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*312delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*245delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.373delG
  hgvsp: ENSP00000423374.1:p.Ala125ProfsTer29
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+447delG
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2392
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala427ProfsTer13
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: GC
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-99912510-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912510
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912510
    reference: chr 6
allele count: 4
allele frequency: 3.298044259753966e-5
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*244T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.372T>C
  hgvsp: ENST00000511403.1:c.372T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.318T>C
  hgvsp: ENST00000392738.2:c.318T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.410T>C
  hgvsp: ENST00000496090.2:c.410T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1278T>C
  hgvsp: ENST00000327681.6:c.1278T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000439569
  ensembl transcript: ENST00000539675
  gene symbol: USP45
  hgvsc: ENST00000539675.1:c.-177T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*311T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.269T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1278T>C
  hgvsp: ENST00000500704.2:c.1278T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+446T>C
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala426Ala
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

6-99912517-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912517
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912517
    reference: chr 6
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1271C>G
  hgvsp: ENSP00000424372.1:p.Pro424Arg
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*135C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.311C>G
  hgvsp: ENSP00000376495.2:p.Pro104Arg
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1271C>G
  hgvsp: ENSP00000333376.6:p.Pro424Arg
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*237C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.365C>G
  hgvsp: ENSP00000423374.1:p.Pro122Arg
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.403C>G
  hgvsp: ENSP00000421706.1:p.Pro135Arg
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+439C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*304C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.262C>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26304
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7580
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro424Arg
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ

6-99912521-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912521
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912521
    reference: chr 6
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.361C>G
  hgvsp: ENSP00000423374.1:p.Gln121Glu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*300C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+435C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*233C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1267C>G
  hgvsp: ENSP00000333376.6:p.Gln423Glu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.307C>G
  hgvsp: ENSP00000376495.2:p.Gln103Glu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*131C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1267C>G
  hgvsp: ENSP00000424372.1:p.Gln423Glu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.258C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.399C>G
  hgvsp: ENSP00000421706.1:p.Gln134Glu
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln423Glu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

6-99912525-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912525
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912525
    reference: chr 6
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*229T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1263T>C
  hgvsp: ENST00000500704.2:c.1263T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*296T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.357T>C
  hgvsp: ENST00000511403.1:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1263T>C
  hgvsp: ENST00000327681.6:c.1263T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.254T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*127T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.395T>C
  hgvsp: ENST00000496090.2:c.395T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.303T>C
  hgvsp: ENST00000392738.2:c.303T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+431T>C
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6370
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ile421Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

6-99912535-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912535
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912535
    reference: chr 6
allele count: 241
allele frequency: 1.98710443429363e-3
allele num: 121282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*117T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.347T>C
  hgvsp: ENSP00000423374.1:p.Ile116Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+421T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1253T>C
  hgvsp: ENSP00000424372.1:p.Ile418Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1253T>C
  hgvsp: ENSP00000333376.6:p.Ile418Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.385T>C
  hgvsp: ENSP00000421706.1:p.Ile129Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.293T>C
  hgvsp: ENSP00000376495.2:p.Ile98Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.244T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*286T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*219T>C
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12110
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 9.75e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 11413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 26277
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 5.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile418Thr
num of homozygotes: 3
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

6-99912537-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912537
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912537
    reference: chr 6
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.383T>C
  hgvsp: ENST00000496090.2:c.383T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.291T>C
  hgvsp: ENST00000392738.2:c.291T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1251T>C
  hgvsp: ENST00000327681.6:c.1251T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1251T>C
  hgvsp: ENST00000500704.2:c.1251T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.345T>C
  hgvsp: ENST00000511403.1:c.345T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*115T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.242T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*284T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*217T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+419T>C
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr417Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

6-99912539-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912539
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912539
    reference: chr 6
allele count: 1
allele frequency: 8.246470510621453e-6
allele num: 121264
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.381A>G
  hgvsp: ENSP00000421706.1:p.Thr128Ala
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.289A>G
  hgvsp: ENSP00000376495.2:p.Thr97Ala
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+417A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1249A>G
  hgvsp: ENSP00000333376.6:p.Thr417Ala
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*282A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*113A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.343A>G
  hgvsp: ENSP00000423374.1:p.Thr115Ala
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*215A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.240A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1249A>G
  hgvsp: ENSP00000424372.1:p.Thr417Ala
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr417Ala
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

6-99912544-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912544
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912544
    reference: chr 6
allele count: 2
allele frequency: 1.649511744523621e-5
allele num: 121248
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.338A>G
  hgvsp: ENSP00000423374.1:p.Asn113Ser
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*277A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.284A>G
  hgvsp: ENSP00000376495.2:p.Asn95Ser
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.376A>G
  hgvsp: ENSP00000421706.1:p.Asn126Ser
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.235A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+412A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*108A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*210A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1244A>G
  hgvsp: ENSP00000424372.1:p.Asn415Ser
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1244A>G
  hgvsp: ENSP00000333376.6:p.Asn415Ser
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn415Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

6-99912552-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912552
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912552
    reference: chr 6
allele count: 1
allele frequency: 8.250961236984109e-6
allele num: 121198
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1236C>G
  hgvsp: ENSP00000333376.6:p.Tyr412Ter
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*269C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.276C>G
  hgvsp: ENSP00000376495.2:p.Tyr92Ter
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+404C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*202C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1236C>G
  hgvsp: ENSP00000424372.1:p.Tyr412Ter
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.227C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.330C>G
  hgvsp: ENSP00000423374.1:p.Tyr110Ter
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.368C>G
  hgvsp: ENSP00000421706.1:p.Tyr123Ter
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*100C>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr412Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

6-99912556-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912556
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912556
    reference: chr 6
allele count: 2
allele frequency: 1.650519088253256e-5
allele num: 121174
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.326G>A
  hgvsp: ENSP00000423374.1:p.Arg109Gln
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.272G>A
  hgvsp: ENSP00000376495.2:p.Arg91Gln
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+400G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*198G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1232G>A
  hgvsp: ENSP00000333376.6:p.Arg411Gln
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.223G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*265G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1232G>A
  hgvsp: ENSP00000424372.1:p.Arg411Gln
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*96G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.364G>A
  hgvsp: ENSP00000421706.1:p.Arg122Gln
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26327
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg411Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

6-99912557-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912557
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912557
    reference: chr 6
allele count: 2
allele frequency: 1.650600818698006e-5
allele num: 121168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.222C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+399C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1231C>T
  hgvsp: ENSP00000333376.6:p.Arg411Ter
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.325C>T
  hgvsp: ENSP00000423374.1:p.Arg109Ter
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*197C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.363C>T
  hgvsp: ENSP00000421706.1:p.Arg122Ter
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.271C>T
  hgvsp: ENSP00000376495.2:p.Arg91Ter
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1231C>T
  hgvsp: ENSP00000424372.1:p.Arg411Ter
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*95C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*264C>T
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26330
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg411Ter
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/6-99912558-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912558
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912558
    reference: chr 6
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.324T>G
  hgvsp: ENSP00000423374.1:p.Asp108Glu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+398T>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1230T>G
  hgvsp: ENSP00000333376.6:p.Asp410Glu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.362T>G
  hgvsp: ENSP00000421706.1:p.Asp121Glu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*196T>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1230T>G
  hgvsp: ENSP00000424372.1:p.Asp410Glu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.270T>G
  hgvsp: ENSP00000376495.2:p.Asp90Glu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*94T>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*263T>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.221T>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26327
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp410Glu
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

6-99912558-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912558
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912558
    reference: chr 6
allele count: 111
allele frequency: 9.161590650225325e-4
allele num: 121158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*263T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*196T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1230T>C
  hgvsp: ENST00000500704.2:c.1230T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.270T>C
  hgvsp: ENST00000392738.2:c.270T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.324T>C
  hgvsp: ENST00000511403.1:c.324T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+398T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.362T>C
  hgvsp: ENST00000496090.2:c.362T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1230T>C
  hgvsp: ENST00000327681.6:c.1230T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.221T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*94T>C
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 12111
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 26327
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3364
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp410Asp
num of homozygotes: 2
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD

6-99912563-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912563
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912563
    reference: chr 6
allele count: 1
allele frequency: 8.25559316436886e-6
allele num: 121130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*258C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*89C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.319C>T
  hgvsp: ENSP00000423374.1:p.His107Tyr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.265C>T
  hgvsp: ENSP00000376495.2:p.His89Tyr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.216C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1225C>T
  hgvsp: ENSP00000424372.1:p.His409Tyr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1225C>T
  hgvsp: ENSP00000333376.6:p.His409Tyr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*191C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.357C>T
  hgvsp: ENSP00000421706.1:p.His120Tyr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+393C>T
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11463
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His409Tyr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

6-99912564-ATC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912564
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912562
    reference: chr 6
allele count: 5
allele frequency: 4.128205551610826e-5
allele num: 121118
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1222_1223delGA
  hgvsp: ENSP00000333376.6:p.Asp408SerfsTer2
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.213_214delGA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.354_355delGA
  hgvsp: ENSP00000421706.1:p.Asp119SerfsTer2
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1222_1223delGA
  hgvsp: ENSP00000424372.1:p.Asp408SerfsTer2
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.316_317delGA
  hgvsp: ENSP00000423374.1:p.Asp106SerfsTer2
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*188_*189delGA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.262_263delGA
  hgvsp: ENSP00000376495.2:p.Asp88SerfsTer2
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*255_*256delGA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+390_1164+391delGA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*86_*87delGA
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26358
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp408SerfsTer2
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: ATC
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD

6-99912575-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912575
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912575
    reference: chr 6
allele count: 3
allele frequency: 2.482128673550437e-5
allele num: 120864
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*179C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1213C>T
  hgvsp: ENSP00000333376.6:p.Arg405Trp
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.307C>T
  hgvsp: ENSP00000423374.1:p.Arg103Trp
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.253C>T
  hgvsp: ENSP00000376495.2:p.Arg85Trp
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.345C>T
  hgvsp: ENSP00000421706.1:p.Arg116Trp
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1213C>T
  hgvsp: ENSP00000424372.1:p.Arg405Trp
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+381C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.204C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*77C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*246C>T
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26292
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35825
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg405Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

6-99912575-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912575
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912575
    reference: chr 6
allele count: 1
allele frequency: 8.273762245168123e-6
allele num: 120864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.307C>A
  hgvsp: ENST00000511403.1:c.307C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.204C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.345C>A
  hgvsp: ENST00000496090.2:c.345C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1213C>A
  hgvsp: ENST00000500704.2:c.1213C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*77C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1213C>A
  hgvsp: ENST00000327681.6:c.1213C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*246C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*179C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.253C>A
  hgvsp: ENST00000392738.2:c.253C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+381C>A
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3349
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg405Arg
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

6-99912585-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912585
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912585
    reference: chr 6
allele count: 1
allele frequency: 8.29132395860971e-6
allele num: 120608
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1203T>C
  hgvsp: ENST00000500704.2:c.1203T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1203T>C
  hgvsp: ENST00000327681.6:c.1203T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*236T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*169T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+371T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.194T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.243T>C
  hgvsp: ENST00000392738.2:c.243T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.335T>C
  hgvsp: ENST00000496090.2:c.335T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.297T>C
  hgvsp: ENST00000511403.1:c.297T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*67T>C
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6104
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Tyr401Tyr
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

6-99912591-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912591
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912591
    reference: chr 6
allele count: 2
allele frequency: 1.659861235600704e-5
allele num: 120492
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.329T>C
  hgvsp: ENST00000496090.2:c.329T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1197T>C
  hgvsp: ENST00000327681.6:c.1197T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*163T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.237T>C
  hgvsp: ENST00000392738.2:c.237T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+365T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.291T>C
  hgvsp: ENST00000511403.1:c.291T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1197T>C
  hgvsp: ENST00000500704.2:c.1197T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.188T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*61T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*230T>C
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asn399Asn
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP

6-99912592-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912592
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912592
    reference: chr 6
allele count: 24
allele frequency: 1.992428770671449e-4
allele num: 120456
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.236A>G
  hgvsp: ENSP00000376495.2:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1196A>G
  hgvsp: ENSP00000333376.6:p.Asn399Ser
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*162A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+364A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.290A>G
  hgvsp: ENSP00000423374.1:p.Asn97Ser
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.328A>G
  hgvsp: ENSP00000421706.1:p.Asn110Ser
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.187A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*60A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1196A>G
  hgvsp: ENSP00000424372.1:p.Asn399Ser
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*229A>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 26106
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35462
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn399Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/6-99912594-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912594
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912594
    reference: chr 6
allele count: 1
allele frequency: 8.313381218409152e-6
allele num: 120288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.234G>T
  hgvsp: ENSP00000376495.2:p.Met78Ile
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.288G>T
  hgvsp: ENSP00000423374.1:p.Met96Ile
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1194G>T
  hgvsp: ENSP00000333376.6:p.Met398Ile
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*160G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+362G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*58G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.326G>T
  hgvsp: ENSP00000421706.1:p.Met109Ile
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1194G>T
  hgvsp: ENSP00000424372.1:p.Met398Ile
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.185G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*227G>T
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Met398Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP

6-99912594-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912594
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912594
    reference: chr 6
allele count: 651
allele frequency: 5.412011173184358e-3
allele num: 120288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.234G>A
  hgvsp: ENSP00000376495.2:p.Met78Ile
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*58G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*160G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*227G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1194G>A
  hgvsp: ENSP00000333376.6:p.Met398Ile
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.288G>A
  hgvsp: ENSP00000423374.1:p.Met96Ile
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1194G>A
  hgvsp: ENSP00000424372.1:p.Met398Ile
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+362G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.185G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.326G>A
  hgvsp: ENSP00000421706.1:p.Met109Ile
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 26043
  bin: 2.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 9.75e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11719
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 4.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 3.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 11317
  bin: 3.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Met398Ile
num of homozygotes: 14
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

6-99912605-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912605
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912605
    reference: chr 6
allele count: 4
allele frequency: 3.339344152808389e-5
allele num: 119784
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1183T>A
  hgvsp: ENSP00000333376.6:p.Trp395Arg
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.174T>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.223T>A
  hgvsp: ENSP00000376495.2:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.315T>A
  hgvsp: ENSP00000421706.1:p.Trp106Arg
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.277T>A
  hgvsp: ENSP00000423374.1:p.Trp93Arg
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1183T>A
  hgvsp: ENSP00000424372.1:p.Trp395Arg
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*47T>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*149T>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+351T>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*216T>A
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26084
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Trp395Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-99912620-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912620
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912620
    reference: chr 6
allele count: 4
allele frequency: 3.379063323646685e-5
allele num: 118376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.208T>A
  hgvsp: ENSP00000376495.2:p.Ser70Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.300T>A
  hgvsp: ENSP00000421706.1:p.Ser101Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.159T>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.262T>A
  hgvsp: ENSP00000423374.1:p.Ser88Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*32T>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*134T>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1168T>A
  hgvsp: ENSP00000333376.6:p.Ser390Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1168T>A
  hgvsp: ENSP00000424372.1:p.Ser390Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*201T>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+336T>A
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32803
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3233
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser390Thr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

6-99912639-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912639
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912639
    reference: chr 6
allele count: 1
allele frequency: 8.60037497634897e-6
allele num: 116274
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*198-16T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.297-16T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*29-16T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*131-16T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1165-16T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.140T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.259-16T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1165-16T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.205-16T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+317T>C
  variant of: http://identifiers.org/hgnc/20080
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29565
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/6-99912653-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912653
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912652
    reference: chr 6
allele count: 1
allele frequency: 8.720220447172904e-6
allele num: 114676
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*198-31delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.125delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1165-31delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1165-31delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.205-31delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*29-31delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.297-31delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+302delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*131-31delG
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.259-31delG
  variant of: http://identifiers.org/hgnc/20080
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2809
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22663
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5342
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: AC
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/6-99912654-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912654
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912654
    reference: chr 6
allele count: 1
allele frequency: 8.737439930100481e-6
allele num: 114450
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.205-31G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*131-31G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.125G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.297-31G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*198-31G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1165-31G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1165-31G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.259-31G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+302G>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*29-31G>T
  variant of: http://identifiers.org/hgnc/20080
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8474
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ

6-99912654-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912654
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912654
    reference: chr 6
allele count: 1
allele frequency: 8.737439930100481e-6
allele num: 114450
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1165-31G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.297-31G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+302G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*131-31G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.125G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*198-31G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1165-31G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*29-31G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.205-31G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.259-31G>A
  variant of: http://identifiers.org/hgnc/20080
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18097
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8474
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5286
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2663
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

6-99912655-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912655
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912655
    reference: chr 6
allele count: 2
allele frequency: 1.750026250393756e-5
allele num: 114284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.259-32G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.124G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.205-32G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1165-32G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.297-32G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*198-32G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*131-32G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+301G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*29-32G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1165-32G>A
  variant of: http://identifiers.org/hgnc/20080
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6068
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8327
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1282
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

6-99912675-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912675
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912675
    reference: chr 6
allele count: 3
allele frequency: 2.705188551642049e-5
allele num: 110898
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1165-52C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*198-52C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*131-52C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1165-52C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123552
  ensembl transcript: ENST00000513344
  gene symbol: USP45
  hgvsc: ENST00000513344.1:n.104C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*29-52C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+281C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.297-52C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.205-52C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.259-52C>T
  variant of: http://identifiers.org/hgnc/20080
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7931
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2584
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4286
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5510
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

6-99912909-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912909
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912909
    reference: chr 6
allele count: 1
allele frequency: 8.562816824222497e-6
allele num: 116784
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.258+47A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+47A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1164+47A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*28+47A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*197+47A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.204+47A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1164+47A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*130+47A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.296+47A>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6732
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5512
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4456
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19289
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

6-99912910-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912910
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912910
    reference: chr 6
allele count: 7
allele frequency: 5.991714315061458e-5
allele num: 116828
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.204+46A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1164+46A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*28+46A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+46A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1164+46A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*130+46A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.296+46A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*197+46A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.258+46A>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11406
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9297
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2115
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/6-99912912-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912912
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912912
    reference: chr 6
allele count: 9
allele frequency: 7.7064031647629e-5
allele num: 116786
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.258+44T>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1164+44T>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.204+44T>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.296+44T>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*130+44T>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1164+44T>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+44T>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*197+44T>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*28+44T>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18861
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6529
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11545
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5731
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2161
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2062
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

6-99912916-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912916
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912916
    reference: chr 6
allele count: 3
allele frequency: 2.565111069309301e-5
allele num: 116954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1164+40A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*28+40A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.296+40A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*130+40A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1164+40A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.204+40A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.258+40A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*197+40A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+40A>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11889
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4652
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

6-99912940-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912940
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912940
    reference: chr 6
allele count: 1
allele frequency: 8.414675193537529e-6
allele num: 118840
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1164+16C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.204+16C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*130+16C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1164+16C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+16C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*197+16C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.296+16C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.258+16C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*28+16C>T
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28734
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

6-99912953-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912953
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912953
    reference: chr 6
allele count: 1
allele frequency: 8.373386029842748e-6
allele num: 119426
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1164+3A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.204+3A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.296+3A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.258+3A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*130+3A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*197+3A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*28+3A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1164+3A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1164+3A>T
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37479
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1164+3A>T
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD

6-99912964-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912964
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912964
    reference: chr 6
allele count: 1
allele frequency: 8.358548287333457e-6
allele num: 119638
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*122G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.250G>A
  hgvsp: ENSP00000423374.1:p.Glu84Lys
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1156G>A
  hgvsp: ENSP00000358236.2:p.Glu386Lys
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1156G>A
  hgvsp: ENSP00000333376.6:p.Glu386Lys
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*189G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.196G>A
  hgvsp: ENSP00000376495.2:p.Glu66Lys
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.288G>A
  hgvsp: ENSP00000421706.1:p.Glu97Lys
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1156G>A
  hgvsp: ENSP00000424372.1:p.Glu386Lys
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*20G>A
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6279
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu386Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

6-99912966-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912966
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912966
    reference: chr 6
allele count: 2
allele frequency: 1.671206778414693e-5
allele num: 119674
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1154T>C
  hgvsp: ENSP00000424372.1:p.Ile385Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*120T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.248T>C
  hgvsp: ENSP00000423374.1:p.Ile83Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.194T>C
  hgvsp: ENSP00000376495.2:p.Ile65Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1154T>C
  hgvsp: ENSP00000333376.6:p.Ile385Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*18T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*187T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1154T>C
  hgvsp: ENSP00000358236.2:p.Ile385Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.286T>C
  hgvsp: ENSP00000421706.1:p.Ile96Thr
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15069
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1095
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38052
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile385Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-99912970-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912970
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912970
    reference: chr 6
allele count: 7
allele frequency: 5.846487931178485e-5
allele num: 119730
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.190A>G
  hgvsp: ENSP00000376495.2:p.Ile64Val
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1150A>G
  hgvsp: ENSP00000333376.6:p.Ile384Val
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*14A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.282A>G
  hgvsp: ENSP00000421706.1:p.Ile95Val
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*116A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1150A>G
  hgvsp: ENSP00000424372.1:p.Ile384Val
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*183A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.244A>G
  hgvsp: ENSP00000423374.1:p.Ile82Val
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1150A>G
  hgvsp: ENSP00000358236.2:p.Ile384Val
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6149
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2694
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile384Val
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

6-99912972-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912972
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912972
    reference: chr 6
allele count: 7
allele frequency: 5.84609731246555e-5
allele num: 119738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.242C>T
  hgvsp: ENSP00000423374.1:p.Pro81Leu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*114C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.*12C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1148C>T
  hgvsp: ENSP00000424372.1:p.Pro383Leu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1148C>T
  hgvsp: ENSP00000358236.2:p.Pro383Leu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.188C>T
  hgvsp: ENSP00000376495.2:p.Pro63Leu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*181C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1148C>T
  hgvsp: ENSP00000333376.6:p.Pro383Leu
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.280C>T
  hgvsp: ENSP00000421706.1:p.Pro94Leu
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6298
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38261
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro383Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-99912994-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99912994
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99912994
    reference: chr 6
allele count: 3
allele frequency: 2.508780732563974e-5
allele num: 119580
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1126C>A
  hgvsp: ENSP00000424372.1:p.Pro376Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.258C>A
  hgvsp: ENSP00000421706.1:p.Pro87Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.565C>A
  hgvsp: ENSP00000425876.1:p.Ser189Tyr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1126C>A
  hgvsp: ENSP00000358236.2:p.Pro376Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*92C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.220C>A
  hgvsp: ENSP00000423374.1:p.Pro74Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.166C>A
  hgvsp: ENSP00000376495.2:p.Pro56Thr
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*159C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1126C>A
  hgvsp: ENSP00000333376.6:p.Pro376Thr
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro376Thr
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

6-99913003-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99913003
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99913003
    reference: chr 6
allele count: 166
allele frequency: 1.390051917601742e-3
allele num: 119420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.249G>A
  hgvsp: ENSP00000421706.1:p.Val84Met
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.157G>A
  hgvsp: ENSP00000376495.2:p.Val53Met
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1117G>A
  hgvsp: ENSP00000424372.1:p.Val373Met
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.211G>A
  hgvsp: ENSP00000423374.1:p.Val71Met
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*83G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1117G>A
  hgvsp: ENSP00000333376.6:p.Val373Met
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1117G>A
  hgvsp: ENSP00000358236.2:p.Val373Met
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.556G>A
  hgvsp: ENSP00000425876.1:p.Gly186Asp
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*150G>A
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28641
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15355
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 5.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val373Met
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

6-99913004-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99913004
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99913004
    reference: chr 6
allele count: 1
allele frequency: 8.375349670848758e-6
allele num: 119398
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1116G>A
  hgvsp: ENST00000327681.6:c.1116G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.248G>A
  hgvsp: ENST00000496090.2:c.248G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.210G>A
  hgvsp: ENST00000511403.1:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*82G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*149G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.555G>A
  hgvsp: ENSP00000425876.1:p.Gly186Ser
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1116G>A
  hgvsp: ENST00000500704.2:c.1116G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1116G>A
  hgvsp: ENST00000369233.2:c.1116G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.156G>A
  hgvsp: ENST00000392738.2:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly186Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

6-99913005-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99913005
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99913005
    reference: chr 6
allele count: 32
allele frequency: 2.681324574339724e-4
allele num: 119344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.554C>T
  hgvsp: ENST00000507717.1:c.554C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*81C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.247C>T
  hgvsp: ENSP00000421706.1:p.Thr83Met
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.155C>T
  hgvsp: ENSP00000376495.2:p.Thr52Met
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1115C>T
  hgvsp: ENSP00000424372.1:p.Thr372Met
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.209C>T
  hgvsp: ENSP00000423374.1:p.Thr70Met
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1115C>T
  hgvsp: ENSP00000333376.6:p.Thr372Met
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*148C>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1115C>T
  hgvsp: ENSP00000358236.2:p.Thr372Met
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 15406
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28564
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37651
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr372Met
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

6-99913015-TAAAAGG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99913015
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99913009
    reference: chr 6
allele count: 1
allele frequency: 8.400678774845007e-6
allele num: 119038
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1108-9_1108-4delCCTTTT
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-9_*74-4delCCTTTT
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1108-9_1108-4delCCTTTT
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-9_202-4delCCTTTT
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-9_148-4delCCTTTT
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-9_547-4delCCTTTT
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1108-9_1108-4delCCTTTT
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*141-9_*141-4delCCTTTT
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.240-9_240-4delCCTTTT
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 2.25e1
  variant carriers: 0
hgvs: c.1108-9_1108-4delCCTTTT
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: TAAAAGG
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD

6-99913026-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99913026
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99913026
    reference: chr 6
allele count: 1
allele frequency: 8.429002511842749e-6
allele num: 118638
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.240-14G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1108-14G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1108-14G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-14G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1108-14G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-14G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*141-14G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-14G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-14G>A
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5991
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

6-99913030-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99913030
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99913030
    reference: chr 6
allele count: 2
allele frequency: 1.688077111362447e-5
allele num: 118478
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-18A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.240-18A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1108-18A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-18A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1108-18A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-18A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1108-18A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*141-18A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-18A>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6020
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ

6-99913037-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99913037
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99913037
    reference: chr 6
allele count: 2
allele frequency: 1.693250702699042e-5
allele num: 118116
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1108-25G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*141-25G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.240-25G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1108-25G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-25G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-25G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-25G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-25G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1108-25G>A
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14688
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5990
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

6-99913041-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99913041
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99913041
    reference: chr 6
allele count: 4
allele frequency: 3.391324990673856e-5
allele num: 117948
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.240-29T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1108-29T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-29T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-29T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1108-29T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-29T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1108-29T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*141-29T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-29T>C
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4004
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2354
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1995
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

6-99913055-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99913055
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99913055
    reference: chr 6
allele count: 2
allele frequency: 1.707591953826714e-5
allele num: 117124
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1108-43A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-43A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-43A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-43A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1108-43A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1108-43A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.240-43A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-43A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*141-43A>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16913
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5562
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10862
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11473
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5987
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2525
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18842
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

6-99913057-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99913057
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99913057
    reference: chr 6
allele count: 1
allele frequency: 8.557101538566857e-6
allele num: 116862
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1108-45A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1108-45A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*141-45A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1108-45A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-45A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-45A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-45A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-45A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.240-45A>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10842
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3900
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2090
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

6-99913059-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99913059
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99913059
    reference: chr 6
allele count: 1
allele frequency: 8.563696776624533e-6
allele num: 116772
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1108-47T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*141-47T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-47T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-47T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-47T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-47T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1108-47T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.240-47T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1108-47T>C
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10797
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17863
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3356
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4677
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5984
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP

6-99913062-ATACAGT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99913062
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99913056
    reference: chr 6
allele count: 2
allele frequency: 1.717652312818839e-5
allele num: 116438
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*141-56_*141-51delACTGTA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.240-56_240-51delACTGTA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-56_547-51delACTGTA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1108-56_1108-51delACTGTA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-56_*74-51delACTGTA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1108-56_1108-51delACTGTA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1108-56_1108-51delACTGTA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-56_148-51delACTGTA
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-56_202-51delACTGTA
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5482
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10765
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2559
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12066
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1916
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4240
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: ATACAGT
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

6-99914499-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99914499
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99914499
    reference: chr 6
allele count: 1
allele frequency: 8.360225391676559e-6
allele num: 119614
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-1487C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1107+49C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-1487C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-1487C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-1487C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*140+49C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1107+49C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1107+49C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.239+49C>A
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6958
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25707
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

6-99914503-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99914503
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99914503
    reference: chr 6
allele count: 1
allele frequency: 8.342370901810295e-6
allele num: 119870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1107+45A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-1491A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*140+45A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1107+45A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-1491A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-1491A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.239+45A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1107+45A>T
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-1491A>T
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18423
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2522
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

6-99914504-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99914504
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99914504
    reference: chr 6
allele count: 52
allele frequency: 4.338611977906453e-4
allele num: 119854
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.239+44C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*140+44C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-1492C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-1492C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1107+44C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1107+44C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-1492C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1107+44C>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-1492C>A
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18814
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18974
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7823
  bin: 3.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD

6-99914508-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99914508
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99914508
    reference: chr 6
allele count: 1
allele frequency: 8.335000333400014e-6
allele num: 119976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-1496C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.239+40C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-1496C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-1496C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1107+40C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1107+40C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1107+40C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-1496C>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*140+40C>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19215
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2897
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

6-99914512-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99914512
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99914512
    reference: chr 6
allele count: 3
allele frequency: 2.494968480231533e-5
allele num: 120242
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*140+36A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-1500A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1107+36A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-1500A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1107+36A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1107+36A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-1500A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.239+36A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-1500A>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7903
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

6-99914516-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99914516
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99914516
    reference: chr 6
allele count: 1
allele frequency: 8.304406317992327e-6
allele num: 120418
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-1504A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-1504A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-1504A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1107+32A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-1504A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1107+32A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1107+32A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.239+32A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*140+32A>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22058
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7947
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19817
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6572
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

6-99914524-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99914524
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99914524
    reference: chr 6
allele count: 1
allele frequency: 8.284180528862085e-6
allele num: 120712
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-1512A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-1512A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1107+24A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*140+24A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.239+24A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-1512A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1107+24A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1107+24A>G
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-1512A>G
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8013
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6576
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7276
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: T
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

6-99914535-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99914535
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99914535
    reference: chr 6
allele count: 1
allele frequency: 8.268973158913126e-6
allele num: 120934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-1523G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-1523G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-1523G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1107+13G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-1523G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*140+13G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.239+13G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1107+13G>A
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1107+13G>A
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22534
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

6-99914537-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99914537
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 99914537
    reference: chr 6
allele count: 3
allele frequency: 2.479584752206831e-5
allele num: 120988
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421248
  ensembl transcript: ENST00000496518
  gene symbol: USP45
  hgvsc: ENST00000496518.2:c.*74-1525T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000358236
  ensembl transcript: ENST00000369233
  gene symbol: USP45
  hgvsc: ENST00000369233.2:c.1107+11T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000424372
  ensembl transcript: ENST00000500704
  gene symbol: USP45
  hgvsc: ENST00000500704.2:c.1107+11T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000425876
  ensembl transcript: ENST00000507717
  gene symbol: USP45
  hgvsc: ENST00000507717.1:c.547-1525T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000333376
  ensembl transcript: ENST00000327681
  gene symbol: USP45
  hgvsc: ENST00000327681.6:c.1107+11T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000421706
  ensembl transcript: ENST00000496090
  gene symbol: USP45
  hgvsc: ENST00000496090.2:c.239+11T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000376495
  ensembl transcript: ENST00000392738
  gene symbol: USP45
  hgvsc: ENST00000392738.2:c.148-1525T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000422460
  ensembl transcript: ENST00000506871
  gene symbol: USP45
  hgvsc: ENST00000506871.1:c.*140+11T>C
  variant of: http://identifiers.org/hgnc/20080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000123552
  ensembl protein: ENSP00000423374
  ensembl transcript: ENST00000511403
  gene symbol: USP45
  hgvsc: ENST00000511403.1:c.202-1525T>C
  variant of: http://identifiers.org/hgnc/20080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8045
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2536
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36981
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

GenotypeQuality
all individuals: 34943
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2390
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3384
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6381
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1355
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505570611261668e-5
allele num: 66420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.907648e6

MQRankSum
type: SiteQuality
SIO_000300: 9.98e-1

FS
type: SiteQuality
SIO_000300: 3.153e0

MQ
type: SiteQuality
SIO_000300: 5.99e1

VQSLOD
type: SiteQuality
SIO_000300: 4.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.977e0

QD
type: SiteQuality
SIO_000300: 1.302e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.43e-1

GenotypeQuality
all individuals: 114
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35224
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2390
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6381
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3385
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1353
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2515
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66476
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 7.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e-1

QD
type: SiteQuality
SIO_000300: 8.25e0

DP
type: SiteQuality
SIO_000300: 1.911855e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.94e-1

MQ
type: SiteQuality
SIO_000300: 5.666e1

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3386
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35635
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6380
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2394
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7535
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2518
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502900598154438e-5
allele num: 66538
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.914409e6

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.092e1

QD
type: SiteQuality
SIO_000300: 1.082e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

MQRankSum
type: SiteQuality
SIO_000300: -5.466e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.85e-1

GenotypeQuality
all individuals: 3388
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6379
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7544
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2395
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35653
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66544
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.391e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.15e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.33e-1

QD
type: SiteQuality
SIO_000300: 1.237e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.95e0

DP
type: SiteQuality
SIO_000300: 1.91504e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6378
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3386
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2527
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35885
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7570
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2395
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 4.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.759e0

MQRankSum
type: SiteQuality
SIO_000300: -2.56e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

FS
type: SiteQuality
SIO_000300: 6.18e-1

DP
type: SiteQuality
SIO_000300: 1.917685e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
all individuals: 1352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2526
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6377
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 35978
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7573
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2392
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.291e0

VQSLOD
type: SiteQuality
SIO_000300: -2.934e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.06e-1

DP
type: SiteQuality
SIO_000300: 1.918635e6

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

FS
type: SiteQuality
SIO_000300: 7.501e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQ
type: SiteQuality
SIO_000300: 6.014e1

QD
type: SiteQuality
SIO_000300: 1.281e1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6377
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2523
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35979
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.373e0

QD
type: SiteQuality
SIO_000300: 1.31e1

MQRankSum
type: SiteQuality
SIO_000300: -5.87e-1

DP
type: SiteQuality
SIO_000300: 1.918689e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.419999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.98e-1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.624277456647399e-4
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

QD
type: SiteQuality
SIO_000300: 1.066e1

VQSLOD
type: SiteQuality
SIO_000300: -1.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.919026e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQ
type: SiteQuality
SIO_000300: 5.936e1

FS
type: SiteQuality
SIO_000300: 1.152e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.71e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2392
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.399e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.37e-1

QD
type: SiteQuality
SIO_000300: 1.276e1

VQSLOD
type: SiteQuality
SIO_000300: 6.55e-1

FS
type: SiteQuality
SIO_000300: 6.334e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 1.918295e6

MQ
type: SiteQuality
SIO_000300: 5.986e1

GenotypeQuality
all individuals: 2519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.632055480639569e-5
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.19e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.99e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.91837e6

VQSLOD
type: SiteQuality
SIO_000300: -3.077e0

GenotypeQuality
all individuals: 3376
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36000
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-1

FS
type: SiteQuality
SIO_000300: 2.897e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.196e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

DP
type: SiteQuality
SIO_000300: 1.918242e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 238

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 217
allele frequency: 1.315151515151515e-2
allele num: 16500
num of homozygotes: 3

Latino
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allele count: 5
allele frequency: 4.322268326417704e-4
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 1.445643793369314e-3
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499910001799964e-5
allele num: 66668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.36e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.14e-1

DP
type: SiteQuality
SIO_000300: 1.926772e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

MQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.459e1

VQSLOD
type: SiteQuality
SIO_000300: 5.75e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.153e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.432e0

MQRankSum
type: SiteQuality
SIO_000300: -2.921e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 1.706e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.63e0

FS
type: SiteQuality
SIO_000300: 2.789e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.488e0

VQSLOD
type: SiteQuality
SIO_000300: 3.0e-1

DP
type: SiteQuality
SIO_000300: 1.911055e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.944e1

InbreedingCoeff
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SIO_000300: -1.0e-4

DP
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SIO_000300: 1.910604e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.25e0

VQSLOD
type: SiteQuality
SIO_000300: -2.346e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.489e0

MQRankSum
type: SiteQuality
SIO_000300: -6.43e-1

QD
type: SiteQuality
SIO_000300: 1.59e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.21e-1

DP
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SIO_000300: 1.90977e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
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SIO_000300: 3.35e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.676e0

ReadPosRankSum
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SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.53e1

ClippingRankSum
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SIO_000300: -1.502e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.650646593321752e-5
allele num: 10362
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.14e-1

QD
type: SiteQuality
SIO_000300: 1.669e1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
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SIO_000300: 3.06e-1

DP
type: SiteQuality
SIO_000300: 1.909377e6

InbreedingCoeff
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SIO_000300: 7.3e-3

FS
type: SiteQuality
SIO_000300: 2.772e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 8.17e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

African
type: Population
allele count: 2
allele frequency: 1.930874686232864e-4
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.073e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 1.909152e6

FS
type: SiteQuality
SIO_000300: 6.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.32e-1

QD
type: SiteQuality
SIO_000300: 1.415e1

MQRankSum
type: SiteQuality
SIO_000300: -3.78e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.03e-1

BaseQRankSum
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SIO_000300: 5.19e0

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 6.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.15e-2

DP
type: SiteQuality
SIO_000300: 1.910439e6

QD
type: SiteQuality
SIO_000300: 1.544e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 108

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.659969088098918e-5
allele num: 10352
num of homozygotes: 0

East Asian
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allele count: 107
allele frequency: 1.237566504742077e-2
allele num: 8646
num of homozygotes: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66600
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Other
type: Population
allele count: 0
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South Asian
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allele count: 3
allele frequency: 1.818843215714805e-4
allele num: 16494
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e0

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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FS
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ClippingRankSum
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SIO_000300: -1.17e-1

InbreedingCoeff
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ReadPosRankSum
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SIO_000300: 4.03e-1

DP
type: SiteQuality
SIO_000300: 1.910439e6

QD
type: SiteQuality
SIO_000300: 1.544e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
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allele frequency: 0.0e0
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East Asian
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African
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Other
type: Population
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.156e0

FS
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DP
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QD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
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allele count: 0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
type: Population
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Other
type: Population
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 5
allele frequency: 7.510439510920179e-5
allele num: 66574
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European (Finnish)
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allele num: 6610
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ClippingRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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VQSLOD
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DP
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FS
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ReadPosRankSum
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7515
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011594639361542e-5
allele num: 66410
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.689922480620155e-5
allele num: 10320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

FS
type: SiteQuality
SIO_000300: 4.225e0

QD
type: SiteQuality
SIO_000300: 1.311e1

MQ
type: SiteQuality
SIO_000300: 5.952e1

DP
type: SiteQuality
SIO_000300: 1.898855e6

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 390
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 7515
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.689922480620155e-5
allele num: 10320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.72e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.85e-1

FS
type: SiteQuality
SIO_000300: 4.225e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.898855e6

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.2e-2

QD
type: SiteQuality
SIO_000300: 1.311e1

GenotypeQuality
all individuals: 2497
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 18
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7478
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variant carriers: 0

GenotypeQuality
all individuals: 2382
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.692628650904033e-5
allele num: 11504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66282
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.893033e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

QD
type: SiteQuality
SIO_000300: 1.636e1

FS
type: SiteQuality
SIO_000300: 8.757999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -5.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.781e0

VQSLOD
type: SiteQuality
SIO_000300: -6.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.6e0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6102
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variant carriers: 2

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 715
bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 2493
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variant carriers: 0

GenotypeQuality
all individuals: 7458
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variant carriers: 0

GenotypeQuality
all individuals: 2380
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variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.333177788147457e-4
allele num: 8572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.96e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

FS
type: SiteQuality
SIO_000300: 1.237e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.577e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.14e0

DP
type: SiteQuality
SIO_000300: 1.890552e6

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 95
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variant carriers: 0

GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 737
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GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 2378
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GenotypeQuality
all individuals: 7457
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 6105
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variant carriers: 24

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 45
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GenotypeQuality
all individuals: 1348
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GenotypeQuality
all individuals: 2491
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variant carriers: 0

GenotypeQuality
all individuals: 3334
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variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
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GenotypeQuality
all individuals: 961
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 1.131221719457014e-3
allele num: 11492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.661631419939577e-4
allele num: 66200
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-2

MQ
type: SiteQuality
SIO_000300: 5.975e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.72e0

DP
type: SiteQuality
SIO_000300: 1.890084e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.64e-2

QD
type: SiteQuality
SIO_000300: 1.609e1

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
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GenotypeQuality
all individuals: 89
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GenotypeQuality
all individuals: 945
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6265
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variant carriers: 1

GenotypeQuality
all individuals: 2358
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512813530604218e-5
allele num: 66102
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.42e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.698e0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.85e0

QD
type: SiteQuality
SIO_000300: 1.171e1

FS
type: SiteQuality
SIO_000300: 6.12e-1

DP
type: SiteQuality
SIO_000300: 1.889807e6

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 12
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GenotypeQuality
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variant carriers: 631

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 2358
bin: 8.25e1
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GenotypeQuality
all individuals: 7398
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 5
allele frequency: 5.567928730512249e-3
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 470
allele frequency: 4.59612751809114e-2
allele num: 10226
num of homozygotes: 11

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 54
allele frequency: 4.701375587671948e-3
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 116
allele frequency: 1.754863695500893e-3
allele num: 66102
num of homozygotes: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.650967506389193e-4
allele num: 16434
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.42e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

DP
type: SiteQuality
SIO_000300: 1.889807e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.698e0

FS
type: SiteQuality
SIO_000300: 6.12e-1

QD
type: SiteQuality
SIO_000300: 1.171e1

VQSLOD
type: SiteQuality
SIO_000300: 3.85e0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
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GenotypeQuality
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GenotypeQuality
all individuals: 35
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 31
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GenotypeQuality
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GenotypeQuality
all individuals: 158
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GenotypeQuality
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GenotypeQuality
all individuals: 945
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GenotypeQuality
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GenotypeQuality
all individuals: 35214
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GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 80
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GenotypeQuality
all individuals: 5705
bin: 9.75e1
variant carriers: 4

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.556085411414512e-5
allele num: 65846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.517450682852807e-4
allele num: 6590
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

QD
type: SiteQuality
SIO_000300: 9.380000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.501e-1

FS
type: SiteQuality
SIO_000300: 8.09e0

DP
type: SiteQuality
SIO_000300: 1.858041e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15940
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9932
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.506311360448808e-4
allele num: 11408
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.821286e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.23e-1

FS
type: SiteQuality
SIO_000300: 7.264e0

VQSLOD
type: SiteQuality
SIO_000300: 5.07e-1

QD
type: SiteQuality
SIO_000300: 1.056e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.486e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8272
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557001837262168e-5
allele num: 64226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15428
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.749509e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 8.222e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.622e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e0

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.042e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.148e0

QD
type: SiteQuality
SIO_000300: 1.712e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.575646803012637e-5
allele num: 63466
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.12e0

MQ
type: SiteQuality
SIO_000300: 6.047e1

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.42e-1

DP
type: SiteQuality
SIO_000300: 1.648175e6

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.577535888941474e-5
allele num: 63390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8178
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

VQSLOD
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.64075e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.838e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.48e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.222792858889704e-4
allele num: 8178
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14930
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQ
type: SiteQuality
SIO_000300: 5.943e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.64075e6

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 8.48e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8162
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.155636990730761e-4
allele num: 9278
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63322
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.404e0

MQ
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7966
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.332592757165074e-4
allele num: 9002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11088
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61616
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.356e1

DP
type: SiteQuality
SIO_000300: 1.525981e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9994
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.196458482890644e-4
allele num: 8358
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.616048e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.13e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
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variant carriers: 0

GenotypeQuality
all individuals: 6012
bin: 9.75e1
variant carriers: 7

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11236
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.091124481715871e-4
allele num: 64154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

QD
type: SiteQuality
SIO_000300: 1.278e1

FS
type: SiteQuality
SIO_000300: 2.032e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

DP
type: SiteQuality
SIO_000300: 1.620442e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.077586206896552e-3
allele num: 8352
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.147e0

DP
type: SiteQuality
SIO_000300: 1.630659e6

VQSLOD
type: SiteQuality
SIO_000300: 7.63e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.56e-1

QD
type: SiteQuality
SIO_000300: 1.46e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15704
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.591094086665071e-4
allele num: 8354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.017e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.02e-1

DP
type: SiteQuality
SIO_000300: 1.652373e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

VQSLOD
type: SiteQuality
SIO_000300: -1.875e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36305
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.215040397762585e-5
allele num: 16090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

FS
type: SiteQuality
SIO_000300: 5.746e0

QD
type: SiteQuality
SIO_000300: 1.402e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.19e-1

DP
type: SiteQuality
SIO_000300: 1.747595e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.876e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522394421946838e-5
allele num: 65686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.83e-1

DP
type: SiteQuality
SIO_000300: 1.761459e6

FS
type: SiteQuality
SIO_000300: 6.131e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 1.093e1

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.137981831573779e-5
allele num: 16292
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.679e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.61e-1

QD
type: SiteQuality
SIO_000300: 1.084e1

VQSLOD
type: SiteQuality
SIO_000300: -5.532e-1

DP
type: SiteQuality
SIO_000300: 1.76682e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.673e0

MQRankSum
type: SiteQuality
SIO_000300: 1.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.038682427299523e-5
allele num: 65818
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.19e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.767801e6

VQSLOD
type: SiteQuality
SIO_000300: 5.2e-1

FS
type: SiteQuality
SIO_000300: 2.221e0

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
all individuals: 2120
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.13195977434388e-5
allele num: 16308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.074965068950854e-5
allele num: 65844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.041362530413625e-4
allele num: 6576
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.76912e6

MQ
type: SiteQuality
SIO_000300: 5.986e1

FS
type: SiteQuality
SIO_000300: 1.725e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.311e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

GenotypeQuality
all individuals: 130
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variant carriers: 0

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 880
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 2692
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GenotypeQuality
all individuals: 1093
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.119951040391676e-4
allele num: 11438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65850
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.611e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.152e1

DP
type: SiteQuality
SIO_000300: 1.769734e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.829e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6013
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 3
allele frequency: 2.994011976047904e-4
allele num: 10020
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65788
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.475e0

MQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.025e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.79e-1

FS
type: SiteQuality
SIO_000300: 6.683e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

DP
type: SiteQuality
SIO_000300: 1.768861e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 165

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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variant carriers: 0

Other
type: Population
allele count: 2
allele frequency: 2.277904328018223e-3
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65700
num of homozygotes: 0

East Asian
type: Population
allele count: 164
allele frequency: 1.914098972922502e-2
allele num: 8568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.144e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.773e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

DP
type: SiteQuality
SIO_000300: 1.770566e6

FS
type: SiteQuality
SIO_000300: 5.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.05e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1090
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variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65686
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10000
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.766227e6

VQSLOD
type: SiteQuality
SIO_000300: -1.445e-1

FS
type: SiteQuality
SIO_000300: 7.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e-1

QD
type: SiteQuality
SIO_000300: 1.137e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.95e-1

GenotypeQuality
all individuals: 2669
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 32

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 79
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GenotypeQuality
all individuals: 1850
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.691853310361801e-4
allele num: 16252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.197904611073887e-4
allele num: 65668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.627430373095113e-4
allele num: 11418
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.003205128205128e-4
allele num: 9984
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.766537e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-1

QD
type: SiteQuality
SIO_000300: 1.227e1

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

FS
type: SiteQuality
SIO_000300: 2.624e0

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

GenotypeQuality
all individuals: 5991
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 145
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.138952164009112e-3
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9950
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-1

DP
type: SiteQuality
SIO_000300: 1.758851e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.63e-1

FS
type: SiteQuality
SIO_000300: 8.122999999999999e0

MQ
type: SiteQuality
SIO_000300: 4.941e1

VQSLOD
type: SiteQuality
SIO_000300: 9.17e-1

QD
type: SiteQuality
SIO_000300: 5.74e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16108
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531768886710373e-5
allele num: 65284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.2e-1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.745111e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65222
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.244245365186015e-4
allele num: 16074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.52e-1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1759
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GenotypeQuality
all individuals: 5777
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GenotypeQuality
all individuals: 1310
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GenotypeQuality
all individuals: 419
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16010
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.076449776957391e-5
allele num: 65010
num of homozygotes: 0

FS
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.501e1

MQ
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SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.706367e6

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.97e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

Latino
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allele frequency: 1.763357432551578e-4
allele num: 11342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64918
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.050020500205002e-4
allele num: 9756
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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MQ
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

South Asian
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allele frequency: 6.312334301224592e-5
allele num: 15842
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.039933444259567e-4
allele num: 9616
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.093e0

MQRankSum
type: SiteQuality
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BaseQRankSum
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QD
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ClippingRankSum
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SIO_000300: -8.1e-2

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 1.624776e6

MQ
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SIO_000300: 5.895e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553422189082549e-5
allele num: 64374
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.047e0

DP
type: SiteQuality
SIO_000300: 1.620865e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 3.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555064846204087e-5
allele num: 64306
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.65e-1

MQ
type: SiteQuality
SIO_000300: 5.913e1

BaseQRankSum
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.516e1

MQRankSum
type: SiteQuality
SIO_000300: -1.61e-1

DP
type: SiteQuality
SIO_000300: 1.618034e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64118
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.388915432393693e-4
allele num: 8372
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9516
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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BaseQRankSum
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FS
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MQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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DP
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MQ
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.786651008025054e-5
allele num: 10218
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

DP
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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MQ
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FS
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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QD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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East Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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ReadPosRankSum
type: SiteQuality
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FS
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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MQRankSum
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DP
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ClippingRankSum
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QD
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GenotypeQuality
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variant carriers: 52

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

African
type: Population
allele count: 52
allele frequency: 5.079117015042001e-3
allele num: 10238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.386e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.524e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 1.835374e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.58e0

GenotypeQuality
all individuals: 1099
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2507
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7111
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6574
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517542794706811e-5
allele num: 65896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.721e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-2

DP
type: SiteQuality
SIO_000300: 1.851213e6

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.387e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.401e0

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6577
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7199
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2920
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.027184113337773e-5
allele num: 66068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.56e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-2

QD
type: SiteQuality
SIO_000300: 1.401e1

MQRankSum
type: SiteQuality
SIO_000300: -1.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.862919e6

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 35640
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variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7228
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variant carriers: 0

GenotypeQuality
all individuals: 475
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variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1970
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2536
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511213201958532e-5
allele num: 66172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.94e-1

FS
type: SiteQuality
SIO_000300: 3.979e0

MQRankSum
type: SiteQuality
SIO_000300: -5.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

VQSLOD
type: SiteQuality
SIO_000300: -1.791e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 1.871415e6

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36468
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 129
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1101
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2533
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2920
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506704836522525e-5
allele num: 66370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.88164e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e0

QD
type: SiteQuality
SIO_000300: 1.692e1

VQSLOD
type: SiteQuality
SIO_000300: 3.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.25e-1

GenotypeQuality
all individuals: 829
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1953
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 2540
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1098
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2916
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 36868
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6572
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7274
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503804625703029e-5
allele num: 66498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.887202e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.561e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.663e0

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.33e-1

FS
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7283
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
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variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6574
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2920
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.006253006253006e-5
allele num: 66528
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.23e-1

FS
type: SiteQuality
SIO_000300: 6.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e0